Pytorch, Medical Imaging, Image Segmentation, Nnunet, Machine Learning.
case it’s .nrrd. The final key, overwrite_image_reader_writer, is optional. In my case, since I will be reading .nrrd files, I kept it as SimpleITKIO. You can omit this key and nnUNet will figure out the best I/O tool to read and write your data. By now, you should have your main folder container