Pytorch, Medical Imaging, Image Segmentation, Nnunet, Machine Learning.
do so: nnUNetv2_predict -i nnUNet_dirs/nnUNet_raw/Dataset300_Aorta/imagesTs -o nnUNet_dirs/nnUNet_raw/nnUNet_tests/ -d 300 -c 3d_fullres -tr nnUNetTrainer_250epochs -f all Evaluation is the final piece of the puzzle. With nnUNetv2_evaluate_folder, you can assess the performance of your model