Pytorch, Medical Imaging, Image Segmentation, Nnunet, Machine Learning.
see, in this file, I am specifying channel_names which is just CT in our case. I am also specifying labels, which are 2 in my case, the background and the aorta. There is also numTraining, which is the number of your training images (scans) and there is file_ending which is the extension. In my