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chromosomal replication initiator protein DnaA MULTISPECIES: DNA polymerase III subunit beta diacylglycerol kinase family protein DUF951 family protein helix-turn-helix transcriptional regulator redox-regulated ATPase YchF aminoacyl-tRNA hydrolase transcription-repair coupling factor MULTISPECIES: RNA-binding S4 domain-containing protein MULTISPECIES: septum formation initiator family protein MULTISPECIES: SP_0009 family protein serine hydrolase tRNA lysidine(34) synthetase TilS hypoxanthine phosphoribosyltransferase ATP-dependent zinc metalloprotease FtsH sigma-70 family RNA polymerase sigma factor rod shape-determining protein MreC rod shape-determining protein MreD CHAP domain-containing protein MULTISPECIES: ribose-phosphate diphosphokinase pyridoxal phosphate-dependent aminotransferase DNA repair protein RecO phosphate acyltransferase PlsX phosphopantetheine-binding protein phosphoribosylaminoimidazolesuccinocarboxamide synthase phosphoribosylformylglycinamidine synthase amidophosphoribosyltransferase phosphoribosylformylglycinamidine cyclo-ligase phosphoribosylglycinamide formyltransferase bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase phosphoribosylamine--glycine ligase 5-(carboxyamino)imidazole ribonucleotide mutase 5-(carboxyamino)imidazole ribonucleotide synthase hypothetical protein hypothetical protein adenylosuccinate lyase hypothetical protein CPBP family intramembrane glutamic endopeptidase Msa family membrane protein ABC transporter ATP-binding protein membrane protein ABC transporter ATP-binding protein MULTISPECIES: hypothetical protein Holliday junction branch migration DNA helicase RuvB GNAT family N-acetyltransferase HAD-IA family hydrolase helix-turn-helix domain-containing protein IS110 family transposase IS4 family transposase folylpolyglutamate synthase/dihydrofolate synthase family protein Heme/copper-type cytochrome/quinol oxidase subunit 1 DNA mismatch repair endonuclease MutL Holliday junction branch migration protein RuvA DNA-3-methyladenine glycosylase I competence/damage-inducible protein A MULTISPECIES: recombinase RecA MULTISPECIES: transcriptional regulator Spx MULTISPECIES: IreB family regulatory phosphoprotein MULTISPECIES: Holliday junction resolvase RuvX MULTISPECIES: DUF1292 domain-containing protein nucleotidyltransferase family protein hypothetical protein 30S ribosomal protein S10 MULTISPECIES: 50S ribosomal protein L3 MULTISPECIES: 50S ribosomal protein L4 MULTISPECIES: 50S ribosomal protein L23 MULTISPECIES: 50S ribosomal protein L2 MULTISPECIES: 50S ribosomal protein L22 MULTISPECIES: 30S ribosomal protein S3 MULTISPECIES: 50S ribosomal protein L16 MULTISPECIES: 50S ribosomal protein L29 MULTISPECIES: 50S ribosomal protein L14 50S ribosomal protein L24 MULTISPECIES: 50S ribosomal protein L5 MULTISPECIES: type Z 30S ribosomal protein S14 MULTISPECIES: 30S ribosomal protein S8 MULTISPECIES: 50S ribosomal protein L6 MULTISPECIES: 50S ribosomal protein L18 MULTISPECIES: 30S ribosomal protein S5 MULTISPECIES: 50S ribosomal protein L30 MULTISPECIES: 50S ribosomal protein L15 preprotein translocase subunit SecY MULTISPECIES: adenylate kinase MULTISPECIES: translation initiation factor IF-1 MULTISPECIES: 30S ribosomal protein S13 MULTISPECIES: 30S ribosomal protein S11 DNA-directed RNA polymerase subunit alpha 50S ribosomal protein L17 MULTISPECIES: tyrosine-type recombinase/integrase MULTISPECIES: DUF3173 domain-containing protein replication initiation factor domain-containing protein hypothetical protein FtsK/SpoIIIE domain-containing protein hypothetical protein hypothetical protein hypothetical protein DUF2971 domain-containing protein tyrosine-type recombinase/integrase MULTISPECIES: zinc-dependent MarR family transcriptional regulator metal ABC transporter ATP-binding protein MULTISPECIES: metal ABC transporter permease zinc ABC transporter substrate-binding protein AdcA CopY/TcrY family copper transport repressor heavy metal-associated domain-containing protein HIT family protein tyrosine--tRNA ligase penicillin-binding protein PBP1B MULTISPECIES: 30S ribosomal protein S19 MULTISPECIES: DNA-directed RNA polymerase subunit beta MULTISPECIES: 30S ribosomal protein S17 DNA-directed RNA polymerase subunit beta' DUF1033 family protein competence type IV pilus ATPase ComGA MULTISPECIES: 50S ribosomal protein L36 competence type IV pilus assembly protein ComGB competence type IV pilus major pilin ComGC competence type IV pilus minor pilin ComGD competence type IV pilus minor pilin ComGE competence type IV pilus minor pilin ComGF competence type IV pilus minor pilin ComGG class I SAM-dependent methyltransferase acetate kinase folate family ECF transporter S component folylpolyglutamate synthase/dihydrofolate synthase family protein glutamyl aminopeptidase MULTISPECIES: DUF4651 domain-containing protein thioredoxin family protein DUF1002 domain-containing protein YtpR family tRNA-binding protein DUF2785 domain-containing protein single-stranded DNA-binding protein hypothetical protein co-chaperone GroES chaperonin GroEL MULTISPECIES: 30S ribosomal protein S12 MULTISPECIES: 30S ribosomal protein S7 elongation factor G M13 family metallopeptidase type I glyceraldehyde-3-phosphate dehydrogenase phosphoglycerate kinase aromatic acid exporter family protein MULTISPECIES: MerR family transcriptional regulator MULTISPECIES: type I glutamate--ammonia ligase MULTISPECIES: ribonuclease J MULTISPECIES: DNA-dependent RNA polymerase subunit epsilon tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB ribosomal protein S18-alanine N-acetyltransferase tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD AraC family transcriptional regulator sugar ABC transporter substrate-binding protein sugar ABC transporter permease carbohydrate ABC transporter permease alpha-galactosidase AzlC family ABC transporter permease AzlD domain-containing protein YeiH family protein YSIRK-type signal peptide-containing protein DUF1542 domain-containing protein LPXTG cell wall anchor domain-containing protein hypothetical protein ABC transporter ATP-binding protein NAD(P)/FAD-dependent oxidoreductase glycoside hydrolase family 1 protein MULTISPECIES: DUF536 domain-containing protein BglG family transcription antiterminator MULTISPECIES: PTS sugar transporter subunit IIB PTS ascorbate transporter subunit IIC transketolase transketolase C-terminal domain-containing protein glycerophosphodiester phosphodiesterase MULTISPECIES: YbaB/EbfC family nucleoid-associated protein SIS domain-containing protein YSIRK signal domain/LPXTG anchor domain surface protein Xaa-Pro dipeptidyl-peptidase CppA N-terminal domain-containing protein formate C-acetyltransferase DNA polymerase IV Rrf2 family transcriptional regulator NAD(P)-dependent oxidoreductase PfkB family carbohydrate kinase MULTISPECIES: DNA repair protein ROK family protein PTS sugar transporter subunit IIC DUF4838 domain-containing protein right-handed parallel beta-helix repeat-containing protein hypothetical protein ABC transporter permease ABC transporter ATP-binding protein ABC transporter substrate-binding protein glucosamine-6-phosphate isomerase ATP-dependent RecD-like DNA helicase signal peptidase I ribonuclease HIII Gfo/Idh/MocA family oxidoreductase LysM domain-containing protein alpha,alpha-phosphotrehalase PTS system trehalose-specific EIIBC component trehalose operon repressor MULTISPECIES: hypothetical protein MULTISPECIES: CvpA family protein endonuclease MutS2 GNAT family N-acetyltransferase MULTISPECIES: thioredoxin AMP-binding protein peptide-methionine (R)-S-oxide reductase MsrB helix-turn-helix domain-containing protein DUF1430 domain-containing protein DUF1430 domain-containing protein ABC transporter ATP-binding protein sodium:alanine symporter family protein MULTISPECIES: mechanosensitive ion channel family protein DUF4352 domain-containing protein NADP-specific glutamate dehydrogenase dihydroorotate oxidase CapA family protein Cof-type HAD-IIB family hydrolase ABC-2 family transporter protein MULTISPECIES: ABC-2 family transporter protein ATP-binding cassette domain-containing protein TetR/AcrR family transcriptional regulator YhgE/Pip domain-containing protein DUF4097 family beta strand repeat-containing protein DUF1700 domain-containing protein MULTISPECIES: PadR family transcriptional regulator CidA/LrgA family protein LrgB family protein formate/nitrite transporter family protein MULTISPECIES: aquaglyceroporin Gla helicase HerA-like domain-containing protein CoA pyrophosphatase LPXTG cell wall anchor domain-containing protein methyl-accepting chemotaxis protein LPXTG cell wall anchor domain-containing protein MULTISPECIES: 50S ribosomal protein L32 histidine--tRNA ligase alcohol dehydrogenase AdhP bifunctional acetaldehyde-CoA/alcohol dehydrogenase threonine synthase ABC transporter ATP-binding protein/permease ABC transporter ATP-binding protein MptD family putative ECF transporter S component energy-coupling factor transporter transmembrane component T ABC transporter ATP-binding protein MATE family efflux transporter mevalonate kinase diphosphomevalonate decarboxylase phosphomevalonate kinase type 2 isopentenyl-diphosphate Delta-isomerase ABC transporter ATP-binding protein ABC transporter transmembrane domain-containing protein ACT domain-containing protein PFL family protein histidine phosphatase family protein heat-inducible transcriptional repressor HrcA MULTISPECIES: nucleotide exchange factor GrpE molecular chaperone DnaK molecular chaperone DnaJ lipoate--protein ligase family protein amidase transporter substrate-binding domain-containing protein amino acid ABC transporter permease helix-turn-helix transcriptional regulator hypothetical protein heavy metal translocating P-type ATPase Fur family transcriptional regulator tRNA pseudouridine(38-40) synthase TruA bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase ECF transporter S component TIGR01440 family protein DUF1349 domain-containing protein hypothetical protein Rrf2 family transcriptional regulator NADP-dependent oxidoreductase alpha/beta hydrolase SDR family NAD(P)-dependent oxidoreductase NADH:flavin oxidoreductase/NADH oxidase family protein MULTISPECIES: Rrf2 family transcriptional regulator TetR/AcrR family transcriptional regulator lipase alpha/beta hydrolase trigger factor glycosyltransferase family 2 protein zinc ABC transporter substrate-binding protein pneumococcal-type histidine triad protein MULTISPECIES: DNA-directed RNA polymerase subunit delta CTP synthase class II fructose-bisphosphate aldolase ATP-dependent DNA helicase RecG asparaginase MULTISPECIES: universal stress protein pyridoxal phosphate-dependent aminotransferase GTP-sensing pleiotropic transcriptional regulator CodY isochorismatase family cysteine hydrolase MULTISPECIES: 50S ribosomal protein L19 hydrolase MULTISPECIES: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB dGTP triphosphohydrolase LacI family DNA-binding transcriptional regulator galactokinase UDP-glucose--hexose-1-phosphate uridylyltransferase DMT family transporter copper homeostasis protein CutC hypothetical protein YqeG family HAD IIIA-type phosphatase MULTISPECIES: ribosome biogenesis GTPase YqeH MULTISPECIES: ribosome assembly RNA-binding protein YhbY nicotinate-nucleotide adenylyltransferase bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK GNAT family protein ribosome silencing factor class I SAM-dependent methyltransferase hypothetical protein nucleotidyltransferase MerR family transcriptional regulator dynamin family protein ATP-binding protein HNH/ENDO VII family nuclease MULTISPECIES: SMI1/KNR4 family protein peptide deformylase ATP-dependent Clp protease ATP-binding subunit 4-alpha-glucanotransferase glycogen/starch/alpha-glucan family phosphorylase MULTISPECIES: UTRA domain-containing protein endonuclease/exonuclease/phosphatase family protein PTS transporter subunit IIBC DUF2812 domain-containing protein MULTISPECIES: PadR family transcriptional regulator MULTISPECIES: YebC/PmpR family DNA-binding transcriptional regulator MULTISPECIES: S-adenosyl-l-methionine hydroxide adenosyltransferase family protein ECF-type riboflavin transporter substrate-binding protein hypothetical protein rhodanese-related sulfurtransferase lactoylglutathione lyase ABC transporter ATP-binding protein energy-coupling factor transporter transmembrane component T MULTISPECIES: cold-shock protein 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG penicillin-binding protein PBP1A MULTISPECIES: Holliday junction resolvase RecU MULTISPECIES: DUF1273 domain-containing protein MULTISPECIES: cell division regulator GpsB class I SAM-dependent RNA methyltransferase cell division site-positioning protein MapZ family protein MULTISPECIES: S-ribosylhomocysteine lyase ribonuclease Y guanylate kinase MULTISPECIES: DNA-directed RNA polymerase subunit omega primosomal protein N' methionyl-tRNA formyltransferase 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB Stp1/IreP family PP2C-type Ser/Thr phosphatase Stk1 family PASTA domain-containing Ser/Thr kinase cell wall-active antibiotics response protein LiaF MULTISPECIES: sensor histidine kinase MULTISPECIES: response regulator transcription factor Cof-type HAD-IIB family hydrolase S1 RNA-binding domain-containing protein cysteine synthase A YigZ family protein DEAD/DEAH box helicase ComF family protein ribosome-associated translation inhibitor RaiA 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD recombination regulator RecX MULTISPECIES: DUF402 domain-containing protein DUF960 domain-containing protein GntR family transcriptional regulator GntR family transcriptional regulator beta-galactosidase family protein PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC PTS system mannose/fructose/sorbose family transporter subunit IID MULTISPECIES: PTS sugar transporter subunit IIA aldose epimerase family protein MULTISPECIES: DUF1912 family protein helix-hairpin-helix domain-containing protein VOC family protein shikimate kinase valine--tRNA ligase hypothetical protein Fic family protein DEAD/DEAH box helicase family protein hypothetical protein XRE family transcriptional regulator MmcQ/YjbR family DNA-binding protein aspartate--ammonia ligase MULTISPECIES: translational GTPase TypA DUF3165 family protein hypothetical protein signal peptidase I ribonuclease G InlB B-repeat-containing protein SpaH/EbpB family LPXTG-anchored major pilin class C sortase UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase FtsQ-type POTRA domain-containing protein cell division protein FtsA cell division protein FtsZ MULTISPECIES: YggS family pyridoxal phosphate-dependent enzyme cell division protein SepF YggT family protein YlmH/Sll1252 family protein DivIVA domain-containing protein GNAT family N-acetyltransferase isoleucine--tRNA ligase MULTISPECIES: DUF1827 family protein MULTISPECIES: NUDIX hydrolase ATP-dependent Clp protease ATP-binding subunit MULTISPECIES: DUF1797 family protein MULTISPECIES: amino acid ABC transporter permease MULTISPECIES: amino acid ABC transporter ATP-binding protein bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase hypothetical protein signal peptidase I hypothetical protein class C sortase stress response transcriptional regulator NmlR DUF3270 domain-containing protein peptidase U32 family protein U32 family peptidase hypothetical protein MULTISPECIES: YdbC family protein biotin transporter BioY cyclase family protein glutathione-disulfide reductase efflux RND transporter periplasmic adaptor subunit ABC transporter ATP-binding protein ABC transporter permease LLM class flavin-dependent oxidoreductase lysine--tRNA ligase histidine phosphatase family protein YbaK/EbsC family protein DUF368 domain-containing protein energy-coupled thiamine transporter ThiT glycoside hydrolase family 25 protein hypothetical protein DUF4430 domain-containing protein MULTISPECIES: FtsW/RodA/SpoVE family cell cycle protein phosphoenolpyruvate carboxylase RNA polymerase sigma factor anti-sigma factor MULTISPECIES: elongation factor Tu triose-phosphate isomerase sugar-phosphatase MULTISPECIES: HD domain-containing protein sulfite exporter TauE/SafE family protein DUF1934 domain-containing protein adenosine deaminase hypothetical protein ABC transporter ATP-binding protein GntR family transcriptional regulator DNA polymerase III subunit alpha 6-phosphofructokinase pyruvate kinase IdeS family IgM protease FAD-binding oxidoreductase GDSL-type esterase/lipase family protein signal peptidase I glutamine--fructose-6-phosphate transaminase (isomerizing) MULTISPECIES: amino acid ABC transporter permease amino acid ABC transporter ATP-binding protein amino acid ABC transporter substrate-binding protein MBL fold metallo-hydrolase bifunctional DnaQ family exonuclease/ATP-dependent helicase glutamate 5-kinase glutamate-5-semialdehyde dehydrogenase pyrroline-5-carboxylate reductase TetR/AcrR family transcriptional regulator DegV family protein PLP-dependent aminotransferase family protein peroxide stress protein YaaA LCP family protein Wzz/FepE/Etk N-terminal domain-containing protein tyrosine-protein kinase capsular polysaccharide biosynthesis protein Cps4B sugar transferase glycosyltransferase family 1 protein glycosyltransferase family 4 protein glycosyltransferase family 2 protein oligosaccharide repeat unit polymerase Wzy glycosyltransferase family 2 protein glycosyltransferase family 2 protein hypothetical protein glycosyltransferase family 52 oligosaccharide flippase family protein N-acetylneuraminate synthase UDP-N-acetylglucosamine 2-epimerase acetyltransferase GDSL-type esterase/lipase family protein hypothetical protein IS66 family insertion sequence element accessory protein TnpB hypothetical protein hypothetical protein hypothetical protein hypothetical protein 3-phosphoshikimate 1-carboxyvinyltransferase shikimate kinase prephenate dehydratase LCP family protein 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD UDP-galactopyranose mutase NADPH-dependent FMN reductase MULTISPECIES: MarR family transcriptional regulator DUF5590 domain-containing protein pyridoxal phosphate-dependent aminotransferase asparagine--tRNA ligase MULTISPECIES: DUF6290 family protein type II toxin-antitoxin system RelE/ParE family toxin MATE family efflux transporter MULTISPECIES: RidA family protein RNase adapter RapZ MULTISPECIES: YvcK family protein DNA-binding protein WhiA Crp/Fnr family transcriptional regulator arginine deiminase GNAT family N-acetyltransferase MULTISPECIES: ornithine carbamoyltransferase MULTISPECIES: carbamate kinase YfcC family protein dipeptidase family 16 glycosylhydrolase MULTISPECIES: arginine repressor tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA glucosamine-6-phosphate deaminase hypothetical protein hypothetical protein hypothetical protein hypothetical protein MULTISPECIES: teichoic acid D-Ala incorporation-associated protein DltX D-alanine--poly(phosphoribitol) ligase subunit DltA D-alanyl-lipoteichoic acid biosynthesis protein DltB MULTISPECIES: D-alanine--poly(phosphoribitol) ligase subunit DltC D-alanyl-lipoteichoic acid biosynthesis protein DltD low temperature requirement protein A glutathione S-transferase family protein pseudouridine synthase glutathione peroxidase iron ABC transporter permease iron ABC transporter permease ABC transporter substrate-binding protein ABC transporter ATP-binding protein UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase 1-acyl-sn-glycerol-3-phosphate acyltransferase helix-hairpin-helix domain-containing protein DNA internalization-related competence protein ComEC/Rec2 CBS domain-containing protein hypothetical protein toxic anion resistance protein MULTISPECIES: YitT family protein dTMP kinase DNA polymerase III subunit delta' MULTISPECIES: DNA replication initiation control protein YabA 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 3-phosphoserine/phosphohydroxythreonine transaminase GNAT family acetyltransferase phosphoglycerate dehydrogenase methylated-DNA--[protein]-cysteine S-methyltransferase MULTISPECIES: arsenate reductase family protein cation transporter MULTISPECIES: exodeoxyribonuclease III hypothetical protein amino acid permease DUF975 family protein type II CAAX endopeptidase family protein DUF3885 domain-containing protein hypothetical protein DNA methyltransferase site-specific DNA-methyltransferase DEAD/DEAH box helicase family protein phospho-sugar mutase ECF transporter S component phosphopantothenoylcysteine decarboxylase phosphopantothenate--cysteine ligase formate--tetrahydrofolate ligase PrsW family glutamic-type intramembrane protease FAD-containing oxidoreductase DEAD/DEAH box helicase family protein restriction endonuclease subunit S hypothetical protein DUF6261 family protein DUF5052 family protein GNAT family N-acetyltransferase DUF1905 domain-containing protein glycyl-radical enzyme activating protein MULTISPECIES: DeoR/GlpR family DNA-binding transcription regulator sugar-binding transcriptional regulator MULTISPECIES: PTS lactose/cellobiose transporter subunit IIA PTS sugar transporter subunit IIB PTS sugar transporter subunit IIC glycyl radical protein fructose-6-phosphate aldolase iron-containing alcohol dehydrogenase glycerol dehydrogenase aspartate-semialdehyde dehydrogenase 4-hydroxy-tetrahydrodipicolinate synthase FAD-dependent oxidoreductase helix-turn-helix domain-containing protein glycerol kinase GlpK type 1 glycerol-3-phosphate oxidase MIP/aquaporin family protein 2,6-dichloro-p-hydroquinone 1,2-dioxygenase hypothetical protein oligoendopeptidase F MULTISPECIES: ATP cone domain-containing protein MULTISPECIES: FAD-dependent oxidoreductase DNA helicase PcrA HAD hydrolase-like protein bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase hydroxyethylthiazole kinase thiamine phosphate synthase Crp/Fnr family transcriptional regulator nucleoside phosphorylase ECF transporter S component energy-coupling factor transporter transmembrane component T ATP-binding cassette domain-containing protein ABC transporter ATP-binding protein YjjG family noncanonical pyrimidine nucleotidase CPBP family intramembrane glutamic endopeptidase phage holin LD-carboxypeptidase LdcB/DacB MULTISPECIES: VOC family protein permease ABC transporter ATP-binding protein excinuclease ABC subunit UvrC MULTISPECIES: DUF4044 domain-containing protein GTPase ObgE hypothetical protein MucBP domain-containing protein ATP-dependent nuclease subunit B helicase-exonuclease AddAB subunit AddA glycerol-3-phosphate 1-O-acyltransferase PlsY DNA topoisomerase IV subunit B hypothetical protein YkvA family protein hypothetical protein DNA topoisomerase IV subunit A DUF4230 domain-containing protein branched-chain amino acid aminotransferase MULTISPECIES: DUF2969 domain-containing protein 30S ribosomal protein S1 beta-eliminating lyase-related protein hypothetical protein DUF6556 family protein cysteine desulfurase family protein tRNA uracil 4-sulfurtransferase ThiI branched-chain amino acid transport system II carrier protein MULTISPECIES: 50S ribosomal protein L21 MULTISPECIES: 50S ribosomal protein L27 GNAT family N-acetyltransferase LysR family transcriptional regulator signal peptidase II RluA family pseudouridine synthase MULTISPECIES: zinc ribbon domain-containing protein YjdM Pr6Pr family membrane protein MULTISPECIES: bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR aspartate carbamoyltransferase catalytic subunit carbamoyl phosphate synthase small subunit carbamoyl-phosphate synthase large subunit class I SAM-dependent methyltransferase pyroglutamyl-peptidase I DUF4298 domain-containing protein MULTISPECIES: 30S ribosomal protein S16 MULTISPECIES: KH domain-containing protein ABC transporter ATP-binding protein ABC transporter ATP-binding protein polysaccharide deacetylase family protein homoserine dehydrogenase homoserine kinase UDP-N-acetylmuramate dehydrogenase ABC transporter ATP-binding protein ABC transporter permease ABC transporter permease MULTISPECIES: ABC transporter substrate-binding protein ClC family H(+)/Cl(-) exchange transporter S8 family serine peptidase NAD(P)H-hydrate dehydratase MULTISPECIES: endonuclease III GMP reductase ribosome maturation factor RimM tRNA (guanosine(37)-N1)-methyltransferase TrmD histidinol-phosphate transaminase DeoR/GlpR family DNA-binding transcription regulator MULTISPECIES: 30S ribosomal protein S21 1-phosphofructokinase fructose-specific PTS transporter subunit EIIC MULTISPECIES: DUF1149 family protein DegV family protein 4-hydroxy-tetrahydrodipicolinate reductase CCA tRNA nucleotidyltransferase ABC-F family ATP-binding cassette domain-containing protein hypothetical protein ROK family glucokinase hypothetical protein hypothetical protein thymidylate synthase dihydrofolate reductase MULTISPECIES: ATP-dependent Clp protease ATP-binding subunit ClpX ribosome biogenesis GTP-binding protein YihA/YsxC nucleoside-diphosphate kinase HIRAN domain-containing protein MULTISPECIES: translation elongation factor 4 MULTISPECIES: 4-oxalocrotonate tautomerase excalibur calcium-binding domain-containing protein MULTISPECIES: thymidine kinase peptide chain release factor 1 peptide chain release factor N(5)-glutamine methyltransferase L-threonylcarbamoyladenylate synthase GNAT family N-acetyltransferase serine hydroxymethyltransferase MULTISPECIES: nucleoid-associated protein lysozyme family protein SDR family NAD(P)-dependent oxidoreductase DUF6287 domain-containing protein MULTISPECIES: HIRAN domain-containing protein hypothetical protein hypothetical protein AAA family ATPase 5-methylcytosine-specific restriction endonuclease system specificity protein McrC site-specific integrase MULTISPECIES: DUF3173 domain-containing protein Rep family protein hypothetical protein hypothetical protein hypothetical protein helix-turn-helix domain-containing protein membrane protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein glutamine-hydrolyzing GMP synthase MULTISPECIES: GntR family transcriptional regulator MULTISPECIES: putative DNA-binding protein signal recognition particle protein SatD family protein DUF3307 domain-containing protein AAA family ATPase tyrosine recombinase XerS phosphomannomutase/phosphoglucomutase sensor histidine kinase response regulator transcription factor type II toxin-antitoxin system RelE/ParE family toxin DUF6290 family protein FtsX-like permease family protein ABC transporter ATP-binding protein ABC transporter permease ABC transporter permease ABC transporter ATP-binding protein NisI/SpaI family lantibiotic immunity lipoprotein hypothetical protein carbamoyl phosphate synthase large subunit alpha/beta hydrolase-fold protein alpha/beta hydrolase crosslink repair DNA glycosylase YcaQ family protein MULTISPECIES: AraC family transcriptional regulator methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO HAD family hydrolase MULTISPECIES: 50S ribosomal protein L7/L12 MULTISPECIES: 50S ribosomal protein L10 type I DNA topoisomerase DNA-processing protein DprA sugar O-acetyltransferase MULTISPECIES: metal-sensitive transcriptional regulator rhodanese-like domain-containing protein FAD-dependent oxidoreductase DUF1836 domain-containing protein hemolysin III family protein YdcF family protein ribonuclease HII ribosome biogenesis GTPase YlqF YkgJ family cysteine cluster protein Maf family protein cell surface ecto-5'-nucleotidase Nt5e dihydroorotase MULTISPECIES: uracil-DNA glycosylase glycosyltransferase family 2 protein orotate phosphoribosyltransferase inorganic diphosphatase orotidine-5'-phosphate decarboxylase dihydroorotate dehydrogenase dihydroorotate dehydrogenase electron transfer subunit MULTISPECIES: LysR family transcriptional regulator glucose-1-phosphate adenylyltransferase glycogen synthase GlgA 1,4-alpha-glucan branching protein GlgB transporter substrate-binding domain-containing protein transporter substrate-binding domain-containing protein 8-oxo-dGTP diphosphatase GNAT family N-acetyltransferase ZmpA/ZmpB/ZmpC family metallo-endopeptidase UvrB/UvrC motif-containing protein DUF2971 domain-containing protein excinuclease ABC subunit UvrB ABC transporter substrate-binding protein/permease MULTISPECIES: amino acid ABC transporter ATP-binding protein GNAT family N-acetyltransferase ATP-binding cassette domain-containing protein O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein hypothetical protein hypothetical protein aldose 1-epimerase family protein 6-phospho-beta-galactosidase lactose-specific PTS transporter subunit EIIC MULTISPECIES: PTS lactose/cellobiose transporter subunit IIA PRD domain-containing protein tagatose-bisphosphate aldolase galactose-6-phosphate isomerase subunit LacB galactose-6-phosphate isomerase subunit LacA DeoR/GlpR family DNA-binding transcription regulator hypothetical protein helix-turn-helix domain-containing protein hypothetical protein hypothetical protein XRE family transcriptional regulator A/G-specific adenine glycosylase PaaI family thioesterase ABC transporter ATP-binding protein ABC transporter ATP-binding protein MULTISPECIES: phosphate acetyltransferase MULTISPECIES: RluA family pseudouridine synthase NAD kinase GTP pyrophosphokinase family protein CYTH domain-containing protein MULTISPECIES: ribose-phosphate diphosphokinase cysteine desulfurase family protein DUF1831 domain-containing protein DUF4649 family protein MULTISPECIES: redox-sensing transcriptional repressor Rex gamma-glutamyl-gamma-aminobutyrate hydrolase family protein DNA repair protein RadC class A sortase DNA gyrase subunit A L-lactate dehydrogenase ABC transporter permease MULTISPECIES: ABC transporter permease MULTISPECIES: ABC transporter ATP-binding protein BMP family protein cytidine deaminase deoxyribose-phosphate aldolase pyrimidine-nucleoside phosphorylase class I SAM-dependent methyltransferase type I pantothenate kinase MULTISPECIES: 30S ribosomal protein S20 transglutaminase domain-containing protein HAMP domain-containing sensor histidine kinase MULTISPECIES: response regulator transcription factor hypothetical protein phosphate signaling complex protein PhoU MULTISPECIES: phosphate ABC transporter ATP-binding protein PstB MULTISPECIES: phosphate ABC transporter ATP-binding protein PstB MULTISPECIES: phosphate ABC transporter permease PstA MULTISPECIES: phosphate ABC transporter permease subunit PstC phosphate ABC transporter substrate-binding protein PstS family protein RsmB/NOP family class I SAM-dependent RNA methyltransferase inositol monophosphatase family protein UPF0223 family protein MULTISPECIES: Spx/MgsR family RNA polymerase-binding regulatory protein potassium channel family protein bifunctional riboflavin kinase/FAD synthetase tRNA pseudouridine(55) synthase TruB hypothetical protein hypothetical protein DUF1858 domain-containing protein histone acetyltransferase GNAT family N-acetyltransferase DUF2130 domain-containing protein MULTISPECIES: hypothetical protein ATPase Cof-type HAD-IIB family hydrolase peptidase T MULTISPECIES: DUF5684 domain-containing protein permease MULTISPECIES: PadR family transcriptional regulator DUF4097 family beta strand repeat-containing protein DUF1700 domain-containing protein DUF4097 family beta strand repeat-containing protein DUF1304 domain-containing protein MarR family transcriptional regulator MULTISPECIES: threonine/serine exporter family protein threonine/serine exporter family protein cation diffusion facilitator family transporter GntP family permease 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase MULTISPECIES: dihydroneopterin aldolase dihydropteroate synthase MULTISPECIES: GTP cyclohydrolase I FolE 8-oxo-dGTP diphosphatase DUF4956 domain-containing protein polyphosphate polymerase domain-containing protein hypothetical protein DUF2087 domain-containing protein phenylalanine--tRNA ligase subunit beta GNAT family N-acetyltransferase phenylalanine--tRNA ligase subunit alpha glycoside hydrolase family 3 N-terminal domain-containing protein glycoside hydrolase family 3 N-terminal domain-containing protein HAD family hydrolase SDR family oxidoreductase mannonate dehydratase glucuronate isomerase bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase MULTISPECIES: FadR/GntR family transcriptional regulator beta-glucuronidase sugar kinase MFS transporter DNA/RNA non-specific endonuclease MULTISPECIES: DNA-directed RNA polymerase subunit beta UDP-N-acetylglucosamine 1-carboxyvinyltransferase MULTISPECIES: DUF1146 family protein MULTISPECIES: F0F1 ATP synthase subunit epsilon F0F1 ATP synthase subunit beta MULTISPECIES: F0F1 ATP synthase subunit gamma MULTISPECIES: F0F1 ATP synthase subunit alpha F0F1 ATP synthase subunit delta F0F1 ATP synthase subunit B F0F1 ATP synthase subunit A MULTISPECIES: F0F1 ATP synthase subunit C diacylglycerol kinase family lipid kinase NAD-dependent DNA ligase LigA SPJ_0845 family protein permease TIGR03943 family protein glucose-6-phosphate dehydrogenase DNA alkylation repair protein GNAT family N-acetyltransferase signal recognition particle-docking protein FtsY Cof-type HAD-IIB family hydrolase Cof-type HAD-IIB family hydrolase chromosome segregation protein SMC MULTISPECIES: ribonuclease III acyltransferase family protein ArsR family transcriptional regulator MFS transporter DUF1846 domain-containing protein phosphoenolpyruvate--protein phosphotransferase MULTISPECIES: phosphocarrier protein HPr NADP-dependent isocitrate dehydrogenase citrate synthase aconitate hydratase AcnA glutaredoxin-like protein NrdH class 1b ribonucleoside-diphosphate reductase subunit alpha hypothetical protein class 1b ribonucleoside-diphosphate reductase subunit beta LacI family DNA-binding transcriptional regulator heparinase II/III family protein preprotein translocase subunit YajC MULTISPECIES: PTS system mannose/fructose/sorbose family transporter subunit IID MULTISPECIES: PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB glycoside hydrolase family 88 protein PTS sugar transporter subunit IIA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase sugar kinase RpiB/LacA/LacB family sugar-phosphate isomerase gluconate 5-dehydrogenase IS110 family transposase type II CAAX endopeptidase family protein hypothetical protein CPBP family intramembrane glutamic endopeptidase hypothetical protein DUF3169 family protein MULTISPECIES: helix-turn-helix transcriptional regulator DUF3267 domain-containing protein hypothetical protein hypothetical protein alanine--tRNA ligase LURP-one-related family protein peptidylprolyl isomerase PrsA O-methyltransferase MULTISPECIES: DUF6630 family protein hypothetical protein oligoendopeptidase F competence protein CoiA family protein methionine--tRNA ligase DUF1361 domain-containing protein 3-deoxy-7-phosphoheptulonate synthase MULTISPECIES: 3-deoxy-7-phosphoheptulonate synthase shikimate dehydrogenase 3-dehydroquinate synthase MULTISPECIES: ATP-binding cassette domain-containing protein MULTISPECIES: ABC transporter permease ABC transporter substrate-binding protein ABC transporter substrate-binding protein tagatose-bisphosphate aldolase N-acetylglucosamine-6-phosphate deacetylase MULTISPECIES: YlbF/YmcA family competence regulator prephenate dehydrogenase chorismate synthase type I 3-dehydroquinate dehydratase class I SAM-dependent rRNA methyltransferase LTA synthase family protein pneumococcal-type histidine triad protein MULTISPECIES: 50S ribosomal protein L20 MULTISPECIES: 50S ribosomal protein L35 MULTISPECIES: translation initiation factor IF-3 (d)CMP kinase SAG1386/EF1546 family surface-associated protein ferredoxin EbsA family protein glycosyltransferase MULTISPECIES: DUF2304 domain-containing protein MULTISPECIES: glycosyltransferase family 2 protein glycosyltransferase family 4 protein rhamnan synthesis F family protein glycosyltransferase family 2 protein glycosyltransferase family 8 protein DUF2142 domain-containing protein lipopolysaccharide biosynthesis protein rhamnan synthesis protein F MULTISPECIES: ABC transporter ATP-binding protein MULTISPECIES: ABC transporter permease glycosyltransferase family 2 protein DUF1972 domain-containing protein alkaline phosphatase family protein glucosaminidase domain-containing protein GBS Bsp-like repeat-containing protein LPXTG cell wall anchor domain-containing protein dTDP-4-dehydrorhamnose reductase MULTISPECIES: dTDP-glucose 4,6-dehydratase hypothetical protein dTDP-4-dehydrorhamnose 3,5-epimerase family protein glucose-1-phosphate thymidylyltransferase RfbA ZIP family metal transporter Nif3-like dinuclear metal center hexameric protein tRNA (adenine(22)-N(1))-methyltransferase TrmK DnaD domain-containing protein homoserine O-succinyltransferase MULTISPECIES: adenine phosphoribosyltransferase DUF3114 domain-containing protein single-stranded-DNA-specific exonuclease RecJ cardiolipin synthase M14 family zinc carboxypeptidase SDR family oxidoreductase ribonuclease Z cystathionine beta-lyase GTPase HflX tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA MULTISPECIES: DUF3042 family protein MFS transporter cobalamin-independent methionine synthase II family protein PhoH family protein MULTISPECIES: YozE family protein DUF1801 domain-containing protein 2-dehydropantoate 2-reductase RNA-binding virulence regulatory protein CvfB MULTISPECIES: ribosome recycling factor MULTISPECIES: UMP kinase polysaccharide biosynthesis protein glutathione-dependent disulfide-bond oxidoreductase MULTISPECIES: hypothetical protein MULTISPECIES: 50S ribosomal protein L1 MULTISPECIES: 50S ribosomal protein L11 MULTISPECIES: DUF3397 domain-containing protein VOC family protein DNA translocase FtsK glycoside hydrolase family 32 protein ABC transporter substrate-binding protein carbohydrate ABC transporter permease ABC transporter permease subunit LacI family DNA-binding transcriptional regulator hypothetical protein glyoxalase/bleomycin resistance/extradiol dioxygenase family protein DUF2500 domain-containing protein peptidylprolyl isomerase ISL3 family transposase peptide chain release factor 3 cation-translocating P-type ATPase TIGR02206 family membrane protein UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase OsmC family protein D-alanine--D-alanine ligase recombination mediator RecR penicillin-binding protein PBP2B ATP-binding cassette domain-containing protein ATP-binding cassette domain-containing protein MBL fold metallo-hydrolase cell wall metabolism sensor histidine kinase VicK MULTISPECIES: response regulator YycF amino acid ABC transporter ATP-binding protein transporter substrate-binding domain-containing protein amino acid ABC transporter permease amino acid ABC transporter permease threonine--tRNA ligase MazG-like protein hypothetical protein glycosyltransferase family 4 protein glycosyltransferase FctA domain-containing protein MULTISPECIES: catabolite control protein A Xaa-Pro peptidase family protein tRNA guanosine(34) transglycosylase Tgt DUF975 family protein CoA-binding protein lipoprotein DNA polymerase I hypothetical protein FtsX-like permease family protein ABC transporter ATP-binding protein hypothetical protein thiol peroxidase heavy metal translocating P-type ATPase C69 family dipeptidase SAM-dependent methyltransferase TehB zinc-binding dehydrogenase SsrA-binding protein SmpB ribonuclease R preprotein translocase subunit SecG MULTISPECIES: 50S ribosomal protein L33 multidrug efflux MFS transporter dephospho-CoA kinase DNA-formamidopyrimidine glycosylase MULTISPECIES: GTPase Era MULTISPECIES: diacylglycerol kinase family protein MULTISPECIES: rRNA maturation RNase YbeY MurR/RpiR family transcriptional regulator MULTISPECIES: PTS transporter subunit EIIC N-acetylmannosamine-6-phosphate 2-epimerase cholesterol-dependent cytolysin suilysin HAD family hydrolase ABC transporter ATP-binding protein ABC transporter ATP-binding protein ferrous iron transport protein A ferrous iron transport protein B MULTISPECIES: FeoB-associated Cys-rich membrane protein permease-like cell division protein FtsX MULTISPECIES: cell division ATP-binding protein FtsE peptide chain release factor 2 tRNA epoxyqueuosine(34) reductase QueG VanZ family protein MULTISPECIES: TM2 domain-containing protein hypothetical protein hypothetical protein cation-translocating P-type ATPase TVP38/TMEM64 family protein MULTISPECIES: metal-sulfur cluster assembly factor MULTISPECIES: RNA polymerase sigma factor RpoD DNA primase large conductance mechanosensitive channel protein MscL UDP-glucose 4-epimerase GalE TIGR01906 family membrane protein TIGR01457 family HAD-type hydrolase NUDIX hydrolase acyl-ACP thioesterase domain-containing protein radical SAM family heme chaperone HemW VanZ family protein glycogen/starch/alpha-glucan phosphorylase purine-nucleoside phosphorylase purine-nucleoside phosphorylase arsenate reductase MULTISPECIES: phosphopentomutase ribose-5-phosphate isomerase RpiA restriction endonuclease subunit S restriction endonuclease subunit S class I SAM-dependent DNA methyltransferase DEAD/DEAH box helicase family protein tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE hypothetical protein MULTISPECIES: hypothetical protein flotillin family protein LemA family protein TPM domain-containing protein uracil-DNA glycosylase family protein GNAT family N-acetyltransferase dipeptidase PepV serine/threonine transporter SstT hypothetical protein hypothetical protein hypothetical protein class I SAM-dependent methyltransferase ABC-F family ATP-binding cassette domain-containing protein phosphoglucosamine mutase CdaR family protein diadenylate cyclase CdaA lipid II isoglutaminyl synthase subunit MurT lipid II isoglutaminyl synthase subunit GatD putative RNA methyltransferase DUF3955 domain-containing protein ABC-F family ATP-binding cassette domain-containing protein hypothetical protein M57 family metalloprotease alpha/beta hydrolase family protein ribonuclease J lipoprotein prolyl-tRNA synthetase associated domain-containing protein ABC transporter ATP-binding protein ABC transporter permease tryptophan ABC transporter substrate-binding protein glycoside hydrolase family 1 protein beta-glucoside-specific PTS transporter subunit IIABC MULTISPECIES: PRD domain-containing protein NFACT RNA binding domain-containing protein acetolactate decarboxylase tetratricopeptide repeat protein AI-2E family transporter lactonase family protein MULTISPECIES: hypothetical protein HAD family hydrolase type II toxin-antitoxin system RelE/ParE family toxin DUF6290 family protein MULTISPECIES: surface-displayed alpha-enolase DUF1694 domain-containing protein hypothetical protein glycerate kinase HAD family hydrolase IS110 family transposase phosphoserine phosphatase SerB septation ring formation regulator EzrA DNA topoisomerase (ATP-hydrolyzing) subunit B DJ-1 family glyoxalase III MULTISPECIES: FtsW/RodA/SpoVE family cell cycle protein site-specific integrase hypothetical protein phage/plasmid primase, P4 family hypothetical protein hypothetical protein membrane protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein hypothetical protein MULTISPECIES: helix-turn-helix transcriptional regulator helix-turn-helix transcriptional regulator DUF3800 domain-containing protein site-specific integrase MULTISPECIES: type B 50S ribosomal protein L31 FAD:protein FMN transferase bifunctional oligoribonuclease/PAP phosphatase NrnA MULTISPECIES: flavodoxin 30S ribosomal protein S14 chorismate mutase chloride channel protein bifunctional metallophosphatase/5'-nucleotidase superoxide dismutase SodA DNA polymerase III subunit delta hypothetical protein epoxyqueuosine reductase QueH ABC transporter ATP-binding protein MULTISPECIES: ABC transporter ATP-binding protein MULTISPECIES: branched-chain amino acid ABC transporter permease MULTISPECIES: branched-chain amino acid ABC transporter permease ABC transporter substrate-binding protein MULTISPECIES: YlbG family protein MULTISPECIES: ATP-dependent Clp protease proteolytic subunit MULTISPECIES: uracil phosphoribosyltransferase alpha-glucosidase sucrose phosphorylase MULTISPECIES: carbohydrate ABC transporter permease sugar ABC transporter permease extracellular solute-binding protein alpha-galactosidase AraC family transcriptional regulator MalY/PatB family protein cystathionine gamma-synthase hypothetical protein hypothetical protein hypothetical protein tRNA1(Val) (adenine(37)-N6)-methyltransferase GIY-YIG nuclease family protein potassium channel family protein NAD(P)H-dependent oxidoreductase GNAT family N-acetyltransferase DUF1648 domain-containing protein MULTISPECIES: autorepressor SdpR family transcription factor DEAD/DEAH box helicase YitT family protein MULTISPECIES: PH domain-containing protein pneumococcal-type histidine triad protein hypothetical protein ECF transporter S component pyridoxamine kinase 5'-methylthioadenosine/adenosylhomocysteine nucleosidase MULTISPECIES: cell wall synthase accessory phosphoprotein MacP MULTISPECIES: NUDIX hydrolase bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU ASCH domain-containing protein hypothetical protein 3-oxoacyl-ACP reductase MULTISPECIES: DUF2829 domain-containing protein hypothetical protein PadR family transcriptional regulator hypothetical protein IS200/IS605-like element ISSsu4 family transposase FtsX-like permease family protein ABC transporter ATP-binding protein sensor histidine kinase response regulator transcription factor DUF2974 domain-containing protein aminotransferase nuclear transport factor 2 family protein ABC transporter permease/substrate-binding protein ABC transporter ATP-binding protein MarR family winged helix-turn-helix transcriptional regulator YtxH domain-containing protein MULTISPECIES: DUF948 domain-containing protein prolipoprotein diacylglyceryl transferase HPr(Ser) kinase/phosphatase mannose-6-phosphate isomerase, class I IS630 family transposase PspC domain-containing protein MULTISPECIES: hypothetical protein SprT family protein aldo/keto reductase MULTISPECIES: QueT transporter family protein GtrA family protein YihY/virulence factor BrkB family protein MULTISPECIES: methionyl aminopeptidase GNAT family N-acetyltransferase UDP-N-acetylglucosamine 1-carboxyvinyltransferase NAD(P)H-dependent oxidoreductase methionine adenosyltransferase cytidine/deoxycytidylate deaminase family protein hypothetical protein M42 family metallopeptidase bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA MULTISPECIES: DUF3272 domain-containing protein DNA polymerase III subunit gamma/tau GAF domain-containing protein DUF1294 domain-containing protein PadR family transcriptional regulator MULTISPECIES: uridine kinase DEAD/DEAH box helicase polysaccharide deacetylase family protein VOC family protein MULTISPECIES: phosphoglycerate mutase acetyl-CoA C-acetyltransferase hydroxymethylglutaryl-CoA synthase hydroxymethylglutaryl-CoA reductase, degradative IS110 family transposase GNAT family N-acetyltransferase IS110 family transposase HU family DNA-binding protein YpmS family protein SGNH/GDSL hydrolase family protein DegV family protein DNA repair protein RecN MULTISPECIES: arginine repressor TlyA family rRNA (cytidine-2'-O)-methyltransferase polyprenyl synthetase family protein MULTISPECIES: exodeoxyribonuclease VII small subunit exodeoxyribonuclease VII large subunit neutral zinc metallopeptidase isoprenylcysteine carboxyl methyltransferase family protein HAMP domain-containing sensor histidine kinase response regulator transcription factor CPBP family glutamic-type intramembrane protease serum opacification factor MULTISPECIES: hypothetical protein YSIRK-type signal peptide-containing protein manganese-dependent inorganic pyrophosphatase M3 family oligoendopeptidase MULTISPECIES: pyruvate formate-lyase-activating protein hemolysin family protein ABC transporter ATP-binding protein class I SAM-dependent methyltransferase A24 family peptidase nicotinate phosphoribosyltransferase ammonia-dependent NAD(+) synthetase VanZ family protein MULTISPECIES: 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN YutD-like domain-containing protein SepM family pheromone-processing serine protease pantetheine-phosphate adenylyltransferase 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD lipoprotein MULTISPECIES: rhodanese-like domain-containing protein MULTISPECIES: YqgQ family protein response regulator transcription factor sensor histidine kinase ABC transporter permease ABC transporter ATP-binding protein Dps family protein MULTISPECIES: CsbD family protein low molecular weight protein-tyrosine-phosphatase MULTISPECIES: membrane protein acyltransferase family protein phosphatase PAP2 family protein ECF transporter S component MULTISPECIES: tRNA (cytidine(34)-2'-O)-methyltransferase membrane protein insertion efficiency factor YidD MULTISPECIES: pseudouridine synthase MULTISPECIES: SMC-Scp complex subunit ScpB MULTISPECIES: segregation/condensation protein A site-specific tyrosine recombinase XerD MULTISPECIES: cyclic-di-AMP-binding protein CbpB metallophosphoesterase nucleoside-triphosphate diphosphatase glutamate racemase MULTISPECIES: YneF family protein diaminopimelate decarboxylase aminopeptidase C MULTISPECIES: Bax inhibitor-1/YccA family protein HD domain-containing protein RNA methyltransferase acylphosphatase membrane protein insertase YidC transcription elongation factor GreA endolytic transglycosylase MltG GNAT family N-acetyltransferase UDP-N-acetylmuramate--L-alanine ligase hypothetical protein DEAD/DEAH box helicase hypothetical protein hypothetical protein MULTISPECIES: ribosome biogenesis GTPase Der primosomal protein DnaI replication initiation/membrane attachment protein MULTISPECIES: transcriptional regulator NrdR MULTISPECIES: AI-2E family transporter MULTISPECIES: winged helix-turn-helix domain-containing protein NADP-dependent phosphogluconate dehydrogenase DUF177 domain-containing protein thioredoxin-disulfide reductase MULTISPECIES: DUF4059 family protein DEAD/DEAH box helicase MULTISPECIES: hypothetical protein phospho-N-acetylmuramoyl-pentapeptide-transferase penicillin-binding protein PBP2X cell division protein FtsL MULTISPECIES: 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH helix-turn-helix transcriptional regulator DUF3278 domain-containing protein membrane protein DUF3278 domain-containing protein hypothetical protein hypothetical protein NusG domain II-containing protein 1,4-dihydroxy-2-naphthoate polyprenyltransferase FAD:protein FMN transferase FMN-binding protein polyprenyl synthetase family protein NAD(P)/FAD-dependent oxidoreductase MULTISPECIES: Gx transporter family protein potassium transporter TrkG MULTISPECIES: TrkA family potassium uptake protein MATE family efflux transporter hypothetical protein MULTISPECIES: DUF896 family protein glycine--tRNA ligase subunit beta MULTISPECIES: glycine--tRNA ligase subunit alpha DUF1398 family protein MULTISPECIES: B3/4 domain-containing protein methionine ABC transporter permease MULTISPECIES: methionine ABC transporter ATP-binding protein M20/M25/M40 family metallo-hydrolase MetQ/NlpA family ABC transporter substrate-binding protein gamma-glutamyl-gamma-aminobutyrate hydrolase family protein 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase methylenetetrahydrofolate reductase [NAD(P)H] NCS2 family permease Cof-type HAD-IIB family hydrolase MULTISPECIES: PTS sugar transporter subunit IIB PTS mannose/fructose/sorbose transporter subunit IIC PTS system mannose/fructose/sorbose family transporter subunit IID MULTISPECIES: DUF956 family protein serine--tRNA ligase type I restriction-modification system subunit M restriction endonuclease subunit S HsdR family type I site-specific deoxyribonuclease restriction endonuclease subunit S site-specific integrase CPBP family intramembrane glutamic endopeptidase hypothetical protein hypothetical protein GNAT family N-acetyltransferase acetyl-CoA carboxylase carboxyl transferase subunit alpha acetyl-CoA carboxylase, carboxyltransferase subunit beta acetyl-CoA carboxylase biotin carboxylase subunit 3-hydroxyacyl-ACP dehydratase FabZ acetyl-CoA carboxylase biotin carboxyl carrier protein beta-ketoacyl-ACP synthase II 3-oxoacyl-[acyl-carrier-protein] reductase ACP S-malonyltransferase MULTISPECIES: enoyl-[acyl-carrier-protein] reductase FabK MULTISPECIES: acyl carrier protein beta-ketoacyl-ACP synthase III MULTISPECIES: MarR family transcriptional regulator MULTISPECIES: enoyl-CoA hydratase HAD family phosphatase MULTISPECIES: aspartate kinase alanine racemase MULTISPECIES: holo-ACP synthase MULTISPECIES: preprotein translocase subunit SecA transglutaminase domain-containing protein fructokinase ScrK PTS beta-glucoside transporter subunit IIBCA sucrose-6-phosphate hydrolase LacI family DNA-binding transcriptional regulator MULTISPECIES: transcription antitermination factor NusB MULTISPECIES: Asp23/Gls24 family envelope stress response protein elongation factor P Xaa-Pro peptidase family protein excinuclease ABC subunit UvrA MULTISPECIES: magnesium transporter CorA family protein MULTISPECIES: DUF1129 domain-containing protein MULTISPECIES: 30S ribosomal protein S18 MULTISPECIES: single-stranded DNA-binding protein MULTISPECIES: 30S ribosomal protein S6 IS30 family transposase lipoate--protein ligase DUF6688 family protein dihydrolipoyl dehydrogenase dihydrolipoamide acetyltransferase MULTISPECIES: alpha-ketoacid dehydrogenase subunit beta thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha trimeric intracellular cation channel family protein carbohydrate-binding domain-containing protein lipoprotein 30S ribosome-binding factor RbfA translation initiation factor IF-2 YlxQ-related RNA-binding protein MULTISPECIES: YlxR family protein transcription termination factor NusA MULTISPECIES: ribosome maturation factor RimP MULTISPECIES: tRNA (guanosine(46)-N7)-methyltransferase TrmB MULTISPECIES: phosphotransferase family protein ABC transporter permease ABC transporter ATP-binding protein HIT family protein methyl-accepting chemotaxis protein LCP family protein GNAT family N-acetyltransferase tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE DAK2 domain-containing protein MULTISPECIES: Asp23/Gls24 family envelope stress response protein ABC transporter permease MULTISPECIES: oligopeptide ABC transporter permease MULTISPECIES: ATP-binding cassette domain-containing protein MULTISPECIES: ABC transporter ATP-binding protein oligopeptide ABC transporter substrate-binding protein D-alanyl-D-alanine carboxypeptidase PBP3 MULTISPECIES: Fe-S cluster assembly protein SufB Fe-S cluster assembly sulfur transfer protein SufU cysteine desulfurase Fe-S cluster assembly protein SufD MULTISPECIES: Fe-S cluster assembly ATPase SufC MraY family glycosyltransferase adaptor protein MecA undecaprenyl-diphosphate phosphatase ABC transporter substrate-binding protein/permease MULTISPECIES: amino acid ABC transporter ATP-binding protein MULTISPECIES: hypothetical protein SPFH domain-containing protein MULTISPECIES: threonine ammonia-lyase IlvA MULTISPECIES: ketol-acid reductoisomerase acetolactate synthase small subunit acetolactate synthase large subunit bifunctional glycosyltransferase family 2/GtrA family protein phosphodiester glycosidase family protein hypothetical protein dihydroxy-acid dehydratase DUF6176 family protein metal-sulfur cluster assembly factor MULTISPECIES: 30S ribosomal protein S9 MULTISPECIES: 50S ribosomal protein L13 DegV family protein NYN domain-containing protein 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB PASTA domain-containing protein DUF1761 domain-containing protein aromatic acid exporter family protein hypothetical protein sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC helix-turn-helix domain-containing protein response regulator transcription factor sensor histidine kinase DUF624 domain-containing protein IS110 family transposase ABC transporter substrate-binding protein MULTISPECIES: carbohydrate ABC transporter permease MULTISPECIES: sugar ABC transporter permease beta-N-acetylhexosaminidase ROK family protein alpha-mannosidase glycoside hydrolase family 125 protein GH92 family glycosyl hydrolase bacterial Ig-like domain-containing protein Mini-ribonuclease 3 cysteine--tRNA ligase nucleoside phosphorylase serine O-acetyltransferase polyribonucleotide nucleotidyltransferase GNAT family N-acetyltransferase phospho-sugar glycosidase domain-containing protein MupG family TIM beta-alpha barrel fold protein MULTISPECIES: PTS transporter subunit EIIC N-acetylmuramic acid 6-phosphate etherase MurR/RpiR family transcriptional regulator MULTISPECIES: 30S ribosomal protein S15 solute carrier family 23 protein hypothetical protein hypothetical protein pseudouridine synthase GNAT family N-acetyltransferase hypothetical protein MFS transporter peptide deformylase Sua5/YciO/YrdC/YwlC family protein 3-isopropylmalate dehydratase small subunit 3-isopropylmalate dehydratase large subunit 3-isopropylmalate dehydrogenase 2-isopropylmalate synthase GlsB/YeaQ/YmgE family stress response membrane protein aminopeptidase nitroreductase family protein LemA family protein PolC-type DNA polymerase III DhaKLM operon coactivator DhaQ dihydroxyacetone kinase transcriptional activator DhaS dihydroxyacetone kinase subunit DhaK dihydroxyacetone kinase subunit DhaL MULTISPECIES: dihydroxyacetone kinase phosphoryl donor subunit DhaM MIP/aquaporin family protein proline--tRNA ligase M50 family metallopeptidase phosphatidate cytidylyltransferase isoprenyl transferase preprotein translocase subunit YajC adenylosuccinate synthase bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB DUF6359 domain-containing protein Hsp33 family molecular chaperone HslO MULTISPECIES: tRNA dihydrouridine synthase DusB NUDIX domain-containing protein nicotinamide riboside transporter PnuC AAA family ATPase ATP-dependent Clp protease ATP-binding subunit CtsR family transcriptional regulator thioredoxin domain-containing protein hypothetical protein translation elongation factor Ts MULTISPECIES: 30S ribosomal protein S2 adenylate kinase S8 family serine peptidase MULTISPECIES: transcription termination/antitermination protein NusG MULTISPECIES: preprotein translocase subunit SecE MULTISPECIES: 50S ribosomal protein L33 penicillin-binding protein PBP2A NAD(P)/FAD-dependent oxidoreductase RluA family pseudouridine synthase MULTISPECIES: pur operon repressor phosphotransferase 3'-5' exoribonuclease YhaM family protein DNA recombination protein RmuC thiamine diphosphokinase ribulose-phosphate 3-epimerase ribosome small subunit-dependent GTPase A ABC transporter ATP-binding protein radical SAM protein Rgg/GadR/MutR family transcriptional regulator alkaline phosphatase family protein membrane protein 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA DUF1697 domain-containing protein Txe/YoeB family addiction module toxin type II toxin-antitoxin system Phd/YefM family antitoxin 8-oxo-dGTP diphosphatase type II toxin-antitoxin system RelE/ParE family toxin hypothetical protein hypothetical protein ribonuclease M5 TatD family hydrolase MULTISPECIES: 50S ribosomal protein L34 RNA-binding cell elongation regulator Jag/EloR YidC/Oxa1 family membrane protein insertase MULTISPECIES: ribonuclease P protein component argininosuccinate lyase argininosuccinate synthase hypothetical protein transcription repressor NadR VOC family protein NUDIX domain-containing protein homocysteine S-methyltransferase amino acid permease glutamate--tRNA ligase MFS transporter hypothetical protein LytTR family DNA-binding domain-containing protein MULTISPECIES: TIGR00266 family protein carbonic anhydrase DNA repair protein RadA histidine phosphatase family protein MULTISPECIES: dUTP diphosphatase ABC transporter ATP-binding protein ABC transporter ATP-binding protein MarR family transcriptional regulator NAD(P)H-dependent glycerol-3-phosphate dehydrogenase UTP--glucose-1-phosphate uridylyltransferase GalU rhomboid family intramembrane serine protease 5-formyltetrahydrofolate cyclo-ligase N-acetyldiaminopimelate deacetylase MULTISPECIES: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase hypothetical protein hypothetical protein metallophosphoesterase glucose-6-phosphate isomerase hypothetical protein tRNA adenosine(34) deaminase TadA transketolase MULTISPECIES: L-ascorbate 6-phosphate lactonase transcription antiterminator MULTISPECIES: hypothetical protein L-ribulose-5-phosphate 4-epimerase L-ribulose-5-phosphate 3-epimerase 3-keto-L-gulonate-6-phosphate decarboxylase UlaD MULTISPECIES: PTS sugar transporter subunit IIA MULTISPECIES: PTS sugar transporter subunit IIB PTS ascorbate transporter subunit IIC pullulanase MULTISPECIES: LacI family DNA-binding transcriptional regulator amino acid ABC transporter ATP-binding protein amino acid ABC transporter permease amino acid ABC transporter substrate-binding protein CHAP domain-containing protein PTS sugar transporter subunit IIC DUF3284 domain-containing protein PTS lactose/cellobiose transporter subunit IIA MULTISPECIES: PTS sugar transporter subunit IIB PRD domain-containing protein MupG family TIM beta-alpha barrel fold protein glycoside hydrolase family 1 protein 6-phospho-beta-glucosidase leucine--tRNA ligase metalloendopeptidase metal ABC transporter permease iron chelate uptake ABC transporter family permease subunit metal ABC transporter ATP-binding protein zinc ABC transporter substrate-binding protein metal-dependent transcriptional regulator hypothetical protein type II CAAX endopeptidase family protein putative holin-like toxin hypothetical protein D-aminoacyl-tRNA deacylase bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase heme-binding protein SntA class C sortase class C sortase class C sortase prealbumin-like fold domain-containing protein SpaA isopeptide-forming pilin-related protein pilin N-terminal domain-containing protein SpaA isopeptide-forming pilin-related protein SpaA isopeptide-forming pilin-related protein membrane protein 16S rRNA (uracil(1498)-N(3))-methyltransferase 50S ribosomal protein L11 methyltransferase ASCH domain-containing protein DUF3013 family protein MazG nucleotide pyrophosphohydrolase domain-containing protein replication-associated recombination protein A anaerobic ribonucleoside-triphosphate reductase activating protein GNAT family N-acetyltransferase 5'-nucleotidase C-terminal domain-containing protein MULTISPECIES: hypothetical protein anaerobic ribonucleoside-triphosphate reductase IS4 family transposase hypothetical protein DUF3021 domain-containing protein LytTR family DNA-binding domain-containing protein DNA mismatch repair protein MutS MULTISPECIES: arginine repressor arginine--tRNA ligase SH3 domain-containing protein hypothetical protein MULTISPECIES: hypothetical protein 4-alpha-glucanotransferase extracellular solute-binding protein sugar ABC transporter permease sugar ABC transporter permease MULTISPECIES: integral membrane protein MULTISPECIES: LacI family DNA-binding transcriptional regulator type I pullulanase class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI YitT family protein aspartate--tRNA ligase GNAT family N-acetyltransferase aldo/keto reductase glycosyltransferase family 2 protein glycoside hydrolase family 3 C-terminal domain-containing protein GtrA family protein glycoside hydrolase family 3 protein LytTR family DNA-binding domain-containing protein sensor histidine kinase metallophosphoesterase flavocytochrome c thiol reductase thioredoxin MULTISPECIES: 30S ribosomal protein S4 MULTISPECIES: Veg family protein replicative DNA helicase MULTISPECIES: 50S ribosomal protein L28 MULTISPECIES: 50S ribosomal protein L9 DHH family phosphoesterase MULTISPECIES: 50S ribosomal protein L33 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG NUDIX domain-containing protein NUDIX hydrolase NUDIX hydrolase helix-turn-helix domain-containing protein MULTISPECIES: nuclear transport factor 2 family protein MULTISPECIES: tRNA 2-thiouridine(34) synthase MnmA MULTISPECIES: L-serine ammonia-lyase, iron-sulfur-dependent subunit beta L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha LysM domain-containing protein energy-coupling factor transporter transmembrane protein EcfT MULTISPECIES: energy-coupling factor ABC transporter ATP-binding protein MULTISPECIES: energy-coupling factor ABC transporter ATP-binding protein CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase cytoskeleton protein RodZ pitrilysin family protein pitrilysin family protein S4 domain-containing protein YaaA DNA replication/repair protein RecF MULTISPECIES: IMP dehydrogenase tryptophan--tRNA ligase YitT family protein MULTISPECIES: ATP-binding cassette domain-containing protein YfhO family protein YoaK family protein 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH trypsin-like peptidase domain-containing protein MULTISPECIES: ParB/RepB/Spo0J family partition protein