Hugging Face's logo

Datasets:
longevity-db
/
gene-expression-single-cell-mouse

Size:
10K<n<100K
Tags:
longevity
aging
single-cell
License:
Dataset card Files
xet
Community
jkh commited on
Commit
240d2ea
·
verified ·
1 Parent(s): 904c1a1

Upload folder using huggingface_hub

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. dataset_infos.json +5 -0
  2. dataset_summary.json +73 -0
  3. expression_all_methods_kidney.parquet +3 -0
  4. expression_all_methods_limb_muscle.parquet +3 -0
  5. expression_all_methods_liver.parquet +3 -0
  6. expression_all_methods_lung.parquet +3 -0
  7. expression_all_methods_marrow.parquet +3 -0
  8. expression_all_methods_spleen.parquet +3 -0
  9. expression_bulk_bat.parquet +3 -0
  10. expression_bulk_bone.parquet +3 -0
  11. expression_bulk_brain.parquet +3 -0
  12. expression_bulk_gat.parquet +3 -0
  13. expression_bulk_heart.parquet +3 -0
  14. expression_bulk_kidney.parquet +3 -0
  15. expression_bulk_limb_muscle.parquet +3 -0
  16. expression_bulk_liver.parquet +3 -0
  17. expression_bulk_lung.parquet +3 -0
  18. expression_bulk_marrow.parquet +3 -0
  19. expression_bulk_mat.parquet +3 -0
  20. expression_bulk_pancreas.parquet +3 -0
  21. expression_bulk_scat.parquet +3 -0
  22. expression_bulk_skin.parquet +3 -0
  23. expression_bulk_small_intestine.parquet +3 -0
  24. expression_bulk_spleen.parquet +3 -0
  25. expression_bulk_white_blood_cells.parquet +3 -0
  26. expression_comparison_summary.parquet +3 -0
  27. expression_dge_result_tissue_age_coef.parquet +3 -0
  28. expression_dge_result_tissue_bh_p.parquet +3 -0
  29. expression_dge_result_tissue_cell_age_coef.parquet +3 -0
  30. expression_dge_result_tissue_cell_bh_p.parquet +3 -0
  31. expression_dge_result_tissue_cell_raw_p.parquet +3 -0
  32. expression_dge_result_tissue_raw_p.parquet +3 -0
  33. expression_droplet_&_bulk_liver.parquet +3 -0
  34. expression_droplet_bladder.parquet +3 -0
  35. expression_droplet_heart_and_aorta.parquet +3 -0
  36. expression_droplet_kidney.parquet +3 -0
  37. expression_droplet_limb_muscle.parquet +3 -0
  38. expression_droplet_liver.parquet +3 -0
  39. expression_droplet_lung.parquet +3 -0
  40. expression_droplet_mammary_gland.parquet +3 -0
  41. expression_droplet_marrow.parquet +3 -0
  42. expression_droplet_spleen.parquet +3 -0
  43. expression_droplet_thymus.parquet +3 -0
  44. expression_droplet_tongue.parquet +3 -0
  45. expression_facs_&_bulk_liver.parquet +3 -0
  46. expression_facs_&_droplet_liver.parquet +3 -0
  47. expression_facs_aorta.parquet +3 -0
  48. expression_facs_bat.parquet +3 -0
  49. expression_facs_bladder.parquet +3 -0
  50. expression_facs_brain_myeloid.parquet +3 -0
dataset_infos.json ADDED
@@ -0,0 +1,5 @@
 
 
 
 
 
 
1
+ {
2
+ "name": "gene-expression-single-cell-mouse",
3
+ "source": "https://www.nature.com/articles/s41586-020-2496-1#Sec2",
4
+ "created_at": "2025-06-14T14:05:35.482350"
5
+ }
dataset_summary.json ADDED
@@ -0,0 +1,73 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "file_name": "41586_2020_2496_MOESM8_ESM.xlsx",
3
+ "sheets": [
4
+ "DGE_result.tissue.age_coef",
5
+ "DGE_result.tissue.bh_p",
6
+ "DGE_result.tissue.raw_p",
7
+ "DGE_result.tissue_cell.age_coef",
8
+ "DGE_result.tissue_cell.bh_p",
9
+ "DGE_result.tissue_cell.raw_p",
10
+ "comparison_summary",
11
+ "FACS_Aorta",
12
+ "FACS_BAT",
13
+ "FACS_Bladder",
14
+ "FACS_Brain_Myeloid",
15
+ "FACS_Brain_Non-Myeloid",
16
+ "FACS_Diaphragm",
17
+ "FACS_GAT",
18
+ "FACS_Heart",
19
+ "FACS_Kidney",
20
+ "FACS_Large_Intestine",
21
+ "FACS_Limb_Muscle",
22
+ "FACS_Liver",
23
+ "FACS_Lung",
24
+ "FACS_MAT",
25
+ "FACS_Mammary_Gland",
26
+ "FACS_Marrow",
27
+ "FACS_Pancreas",
28
+ "FACS_SCAT",
29
+ "FACS_Skin",
30
+ "FACS_Spleen",
31
+ "FACS_Thymus",
32
+ "FACS_Tongue",
33
+ "FACS_Trachea",
34
+ "droplet_Bladder",
35
+ "droplet_Heart_and_Aorta",
36
+ "droplet_Kidney",
37
+ "droplet_Limb_Muscle",
38
+ "droplet_Liver",
39
+ "droplet_Lung",
40
+ "droplet_Mammary_Gland",
41
+ "droplet_Marrow",
42
+ "droplet_Spleen",
43
+ "droplet_Thymus",
44
+ "droplet_Tongue",
45
+ "bulk_BAT",
46
+ "bulk_Bone",
47
+ "bulk_Brain",
48
+ "bulk_GAT",
49
+ "bulk_Heart",
50
+ "bulk_Kidney",
51
+ "bulk_Limb_Muscle",
52
+ "bulk_Liver",
53
+ "bulk_Lung",
54
+ "bulk_MAT",
55
+ "bulk_Marrow",
56
+ "bulk_Pancreas",
57
+ "bulk_SCAT",
58
+ "bulk_Skin",
59
+ "bulk_Small_Intestine",
60
+ "bulk_Spleen",
61
+ "bulk_White_Blood_Cells",
62
+ "FACS_&_droplet_Liver",
63
+ "FACS_&_bulk_Liver",
64
+ "droplet_&_bulk_Liver",
65
+ "all_methods_Kidney",
66
+ "all_methods_Limb_Muscle",
67
+ "all_methods_Liver",
68
+ "all_methods_Lung",
69
+ "all_methods_Marrow",
70
+ "all_methods_Spleen"
71
+ ],
72
+ "processed_at": "2025-06-14T14:09:05.511606"
73
+ }
expression_all_methods_kidney.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d365ba3552d95e1c1970a5ca6436cb918e12a34ab128c308e841199ef5ea1a87
3
+ size 5286
expression_all_methods_limb_muscle.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3d367a3bb74a0f69ed7579d86706c53b4e7cfb591804057fe2ff3e2ed2a05685
3
+ size 5844
expression_all_methods_liver.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a23a7a9f380890720caedab38a81d73099929f16547ea5475a9deca993158582
3
+ size 5930
expression_all_methods_lung.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:028f727a1ca2b2b34670b8e816770a7cd1e8a17f0825a40c12fd7ce60bbb5efb
3
+ size 5348
expression_all_methods_marrow.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9f64a6711913b8d3f6a96a4ce8af960edbed683bb1448a8f00ba3d134531af0a
3
+ size 3327
expression_all_methods_spleen.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1e49ea64f06fa51c65b217aabf04b23bdb44dd568aae8e270900db0a4e073a14
3
+ size 4258
expression_bulk_bat.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cdedfb722387f007c82e0a0c5f1d14c0af3d235d40d9d556916cb520f1f496d1
3
+ size 11871
expression_bulk_bone.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e6550b8874d782fe620bee0f3387044a9325b79c6e30d86d11a587eb5f058b89
3
+ size 4193
expression_bulk_brain.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ed3abedd339acab4de0fa2a7ab01ac7a1760e140f35d7734bbe5aef6173dffa9
3
+ size 4718
expression_bulk_gat.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ecf0319abd73a2121fbcc5f713064e155fa51bdb4915c7044ff2c5cb87a81d4c
3
+ size 24840
expression_bulk_heart.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:75bce3bafad02b5b66ef3fadd82c285566bee596e0da2fc0cbceb430c9b5a5f4
3
+ size 4784
expression_bulk_kidney.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c91a6a597a67f030314777cb2752a65e3d41d4385f9879f8d2d9b8bf07d5ebb9
3
+ size 8147
expression_bulk_limb_muscle.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:576986f51b4cf889ba67b9957c1327bec240c38161ba1710ded7e3ca5ab4eb65
3
+ size 11545
expression_bulk_liver.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:bdb5b7b0e23d3538ce9a4894ca9e7304515866b833daf8b40a01e05fe7bdf552
3
+ size 7499
expression_bulk_lung.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4e1bfcf1ffb64e509f37281f02458c4c46ee13fcfe187c1b89efc4ef28c1634f
3
+ size 5932
expression_bulk_marrow.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:036c0a7e804a3e8a0eb2e7ca0c7903c120ab5d2bec5f92b67915b7eed2af34d0
3
+ size 4198
expression_bulk_mat.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:05cf89f53d2095cd98f9c69c994e2a64162050341b4afcc0369bda35c0018e84
3
+ size 42055
expression_bulk_pancreas.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9f64a6711913b8d3f6a96a4ce8af960edbed683bb1448a8f00ba3d134531af0a
3
+ size 3327
expression_bulk_scat.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4cb6186a7ef23736aefe51891f4e0c55930cab2c524cc8a547eab8a05c5d4df5
3
+ size 37675
expression_bulk_skin.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9f64a6711913b8d3f6a96a4ce8af960edbed683bb1448a8f00ba3d134531af0a
3
+ size 3327
expression_bulk_small_intestine.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a6b98ec4d56e3ddd8bb2ec8ec2ca78cc53e35bdef3ddf04f9f1a2b5b51cb9d32
3
+ size 6975
expression_bulk_spleen.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3c585532a537b8f8bfeb1d5ff91128a35166ce6465272a1306ac8261754357d3
3
+ size 4495
expression_bulk_white_blood_cells.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e5c21cabba888a7198ce89a5c4db98c187a8f0338e8ff11e999a889797a740c0
3
+ size 19136
expression_comparison_summary.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:69cce82692b2234a89cedc10820e8f22ad6f6be1ee2d02e9ea8e186b9cd61a37
3
+ size 6812
expression_dge_result_tissue_age_coef.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f8267dc80c7f8527300a3b422a2f98d3df71ecef95bcbe665799479f686cec0b
3
+ size 4652943
expression_dge_result_tissue_bh_p.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:365971037d8ce33c452ea0fc3d589a8c9b1b0e7c83674f0cb2352ed3748bd114
3
+ size 4317265
expression_dge_result_tissue_cell_age_coef.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1d6b5a3658997e6aa082755acdb3866e883722b9c46bea0c011860ca663f80b7
3
+ size 25419197
expression_dge_result_tissue_cell_bh_p.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0c73f806be9fbfa28a4dbdeab5f9b389c14532d12510e5c37610a34c3ddd2bfc
3
+ size 16921398
expression_dge_result_tissue_cell_raw_p.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0cc046111283c819bd375721381829fbe2fa697ca59d42aef39bb4574a828782
3
+ size 27285720
expression_dge_result_tissue_raw_p.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a26f3553ff52b41812223b5151d84beb39c11c5c60bc0b898e214127ce6a6fab
3
+ size 4832877
expression_droplet_&_bulk_liver.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:31e8ebee109b68813334b48b4b7378ca9676f193aac4fac467f78a6c696abe08
3
+ size 6594
expression_droplet_bladder.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:395cf7add34a01c55ee177a74ac32acfcd67fc12375877d5a4c2ef543c425d83
3
+ size 116356
expression_droplet_heart_and_aorta.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:aec7dcb84d09b2e9bd464c3b02be82f49cf4925f6d6436c2c96d8b4fdb420cd4
3
+ size 32428
expression_droplet_kidney.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:98382f3a4ddeab68cf8b9ec44f8e2a173a4161bc23884a6e2990b050ffd8f883
3
+ size 68147
expression_droplet_limb_muscle.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8272f0ddcfea0efdd800555e6b983867d40f6ea3f029a80bef2900ef40b4fcad
3
+ size 24708
expression_droplet_liver.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:9de56de339aff23e0781e3d6d2e2cf6879da183f36e106ba8ff934ba41973197
3
+ size 131948
expression_droplet_lung.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:26d98d301c2ec1235dfe961d51ff3b7696a385a9b910bafe92c0fd60a8bdbd90
3
+ size 92855
expression_droplet_mammary_gland.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e25df95a63af25ca4c710ac0e43cb4e27c9ce6908484414b2c203049830bb270
3
+ size 66775
expression_droplet_marrow.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:19919ca10eda3adf102e1cfc46b09a986aad96b7b4018418248590655941c883
3
+ size 25039
expression_droplet_spleen.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:461050b3c7969c7b29334a607113d73b1ee07b2c2300817dfcbf57f428ba668c
3
+ size 21501
expression_droplet_thymus.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:706da4cf05eab3d0e5c8ff4a558d1d59c9fb33f5c77e322f3e824987fc65a914
3
+ size 59904
expression_droplet_tongue.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:93f04237d16284668e75650d4dfcdc678ab3e1ae9173526218cab215586e3482
3
+ size 19249
expression_facs_&_bulk_liver.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7f0f0436178e60be521ab5c9e299d74a26843900670137c160ff66aa48e13173
3
+ size 6100
expression_facs_&_droplet_liver.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3969824de11f07d13967a8061c6fbd162b3802940dbdce2246368364efe7deba
3
+ size 59526
expression_facs_aorta.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d4964c7754a8c597121a67a3f448205a69d16736ef50d7415f0ea605d85c518b
3
+ size 52263
expression_facs_bat.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0443cbf0d41eb646402f77eeddd7ae7c75f638ff80e14da5f9199cd6f47f73e3
3
+ size 58712
expression_facs_bladder.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a08d511b369126280c970c464de889870eddb7e8cdff3ded76ef0fd6cea5a610
3
+ size 120789
expression_facs_brain_myeloid.parquet ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:05d77369ff7d8d563594ec551c575b4226ad5bd3261e4153d361f7fe79412d08
3
+ size 67171