In September of 2011, Typhoon Nari caused heavy damage in Tai-pei City, and the MRT system was severely impacted. There was serious flooding in the train maintenance center in Nan-gang, in the main MRT hub beneath the Tai-pei train station, along the Ban-nan Line all the way from the Kun-yang to the Long-shan Temple station, and all along the Tam-sui – -Xindian Line from the Gu-ting to the Shuang-lian station.
2001 年 9 月，納莉颱風重創台北市，台北捷運也成為受災最慘的苦主之一，從南港機廠、台北車站，到板南線的昆陽至龍山寺段、淡水新店線的古亭至雙連段，全被洶湧的洪水淹沒。