The "organic law" will, among other changes, cause individual services to lose their respective intelligence agencies, which will be unified under the general staff. The political warfare system (an autonomous system of political commissar-type officers, created in early Republican times, to ensure the loyalty of the military to the nationalist revolution's leaders) will be reorganized and its functions will undergo a qualitative change.
國防部組織法設總政治作戰局，三軍總司令部改編為司令部後，未來軍令系統運作走向為：參謀本部將負責作戰，各軍種負責訓練，各軍種現有的情報及作戰單位，未來可能統合於參謀本部，如此政戰功能將產生質變，政戰系統爾後是否能再單獨設官科，仍待觀察。