  Surgical data science is a new research field that aims to observe all
aspects of the patient treatment process in order to provide the right
assistance at the right time. Due to the breakthrough successes of deep
learning-based solutions for automatic image annotation, the availability of
reference annotations for algorithm training is becoming a major bottleneck in
the field. The purpose of this paper was to investigate the concept of
self-supervised learning to address this issue.
  Our approach is guided by the hypothesis that unlabeled video data can be
used to learn a representation of the target domain that boosts the performance
of state-of-the-art machine learning algorithms when used for pre-training.
Core of the method is an auxiliary task based on raw endoscopic video data of
the target domain that is used to initialize the convolutional neural network
(CNN) for the target task. In this paper, we propose the re-colorization of
medical images with a generative adversarial network (GAN)-based architecture
as auxiliary task. A variant of the method involves a second pre-training step
based on labeled data for the target task from a related domain. We validate
both variants using medical instrument segmentation as target task.
  The proposed approach can be used to radically reduce the manual annotation
effort involved in training CNNs. Compared to the baseline approach of
generating annotated data from scratch, our method decreases exploratively the
number of labeled images by up to 75% without sacrificing performance. Our
method also outperforms alternative methods for CNN pre-training, such as
pre-training on publicly available non-medical or medical data using the target
task (in this instance: segmentation).
  As it makes efficient use of available (non-)public and (un-)labeled data,
the approach has the potential to become a valuable tool for CNN
(pre-)training.

Computer Vision and Pattern Recognition