### Bug description

I'm creating an article in Quarto and using the `section-title-footnotes:` option in YAML to change the default "Footnotes" title to "References".

This customisation works as intended in the Quarto preview on my local machine using VSCode, but when deployed to live site (using GH Actions and GH Pages) the "Footnotes" title reverts to the default.

### Steps to reproduce

Truncated version of article follows: 

````qmd
---
title: "The road to reproducible research: hazards to avoid and tools to get you there safely"
description: |
  The road to reproducibility can be a tricky one to navigate, as Davit Svanidze discovered when he set about making his bachelor's thesis reproducible. If you are thinking of walking a similar path, start here. In this case study, Svanidze and colleagues map their journey, beginning to end -- signposting hazards to avoid and software, tools, and approaches to help you along the way.  
categories:
  - Deep learning
  - Reproducibility
  - Coding
  - Collaboration
author: Davit Svanidze, Andre Python, et al.
date: 06/15/2023
toc: true
image: images/computer-intro.png
image-alt: A young man sits in front of a computer keyboard, surrounded by monitors and books and with computer cables covering various surfaces.
section-title-footnotes: References
---
## Davit’s journey towards reproducibility
### More power, please
The focus of my bachelor's thesis was to better understand the initial spread of Covid-19 in China using deep learning algorithms. I was keen to make my work reproducible, but not only for my own sake. The "reproducibility crisis" is a well-documented problem in science as a whole,[^1] [^2] [^3] [^4] with studies suggesting that around one-third of social science studies published between the years 2010 and 2015 in top journals like *Nature* and *Science* could not be reproduced.[^5] Results that cannot be reproduced are not necessarily “wrong”. But, if findings cannot be reproduced, we cannot be sure of their validity.

[^1]: Peng, Roger D. 2011. "Reproducible Research in Computational Science." *Science* 334 (6060): 1226--1227.
[^2]: Ioannidis, John P. A., Sander Greenland, Mark A. Hlatky, Muin J. Khoury, Malcolm R. Macleod, David Moher, Kenneth F. Schulz, and Robert Tibshirani. 2014. "Increasing Value and Reducing Waste in Research Design, Conduct, and Analysis." *The Lancet* 383 (9912): 166--175.
[^3]: Open Science Collaboration. 2015. "Estimating the Reproducibility of Psychological Science." *Science* 349 (6251): aac4716.
[^4]: Baker, Monya. 2016. "Reproducibility Crisis?" *Nature* 533 (26): 353--366.
[^5]: Camerer, Colin F., Anna Dreber, Felix Holzmeister, Teck-Hua Ho, Jürgen Huber, Magnus Johannesson, Michael Kirchler, Gideon Nave, Brian A. Nosek, Thomas Pfeiffer, *et al*. 2018. "Evaluating the Replicability of Social Science Experiments in *Nature* and *Science* between 2010 and 2015." *Nature Human Behaviour* 2: 637--644.
````


### Expected behavior

![expected](https://github.com/quarto-dev/quarto-cli/assets/91419526/f11eb6f8-cd4a-4184-89af-967970a938f6)


### Actual behavior

![actual](https://github.com/quarto-dev/quarto-cli/assets/91419526/b251556a-706c-4adb-a39e-c3eab3399161)

Live version here: https://realworlddatascience.net/case-studies/posts/2023/06/15/road-to-reproducible-research.html

### Your environment

- IDE: VSCode, 1.79.1
- OS: Windows 10 Home, version 22H2, OS build 19045.3086

### Quarto check output

```bash
[>] Checking versions of quarto binary dependencies...
      Pandoc version 3.1.1: OK
      Dart Sass version 1.55.0: OK
[>] Checking versions of quarto dependencies......OK        
[>] Checking Quarto installation......OK
      Version: 1.3.319
      Path: C:\Users\...\Programs\Quarto\bin
      CodePage: 1252

[>] Checking basic markdown render....OK

[>] Checking Python 3 installation....OK
      Version: 3.10.5
      Path: C:/Users/btarr/AppData/Local/Programs/Python/Python310/python.exe
      Jupyter: 4.10.0
      Kernels: python3

[>] Checking Jupyter engine render....OK

[>] Checking R installation...........OK
      Version: 4.2.3
      Path: C:/PROGRA~1/R/R-42~1.3      
      LibPaths:
        - C:/Users/.../AppData/Local/R/win-library/4.2     
        - C:/Program Files/R/R-4.2.3/library
      knitr: 1.42
      rmarkdown: 2.20

[>] Checking Knitr engine render......OK
```
2023-06-15T14:37:20Z
brtarran
bug
closed
section-title-footnotes customisation works on local machine, not on live deploy
https://github.com/quarto-dev/quarto-cli/issues/5939