Why don't my aliases in .bashrc work? I have Lion on my Mac Air. I wrote some aliases in ~/.bashrc file, which looks like:

# Aliases
alias p='pdflatex *.tex;open *.pdf'
alias bromine='ssh administrator@bromine.org'


I then sourced my .bashrc file from .bash_profile, which I believe is sourced upon startup. My .bash_profile file looks like

# Setting PATH for EPD-7.2-2
# The orginal version is saved in .bash_profile.pysave
PATH="/Library/Frameworks/Python.framework/Versions/Current/bin:${PATH}"
export PATH

MKL_NUM_THREADS=1
export MKL_NUM_THREADS

# MacPorts Installer addition on 2012-02-27_at_18:19:09: adding an appropriate PATH variable for use with MacPorts.
export PATH=/opt/local/bin:/opt/local/sbin:$PATH
# Finished adapting your PATH environment variable for use with MacPorts.

# source bashrc
. .bashrc


Why is it that my aliases work sometimes upon startup, but not always - (sometimes, I have to manually source .bash_profile)?
It seems like your bash shell is looking for .profile instead of .bashrc . What you can do is make a symbolic link:

ln -s ~/.bashrc ~/.profile

and restart your session (close, reopen Terminal). Any future bash setting updates can be made to .profile or .bashrc.