Can protection group be used in a Wolff–Kishner reaction? How can I modify the ozonolysis of cyclohexene such that one of the aldehyde groups of the product, adipaldehyde, is efficiently protected as a base stable protecting group? I know that attempting to monofunctionalize adipaldehyde will lead to mixtures.

My aim is to then do a Wolff–Kishner reduction on the monoprotected dialdehyde.
@Halake: The protection of adipaldehyde as the monoacetal was solved by Schreiber and Claus some years ago [Also see, Schreiber, S.L.; Claus, R.E.; Reagan, J. Tetrahedron Letters, 1982, 23, 3867.] Ozonolysis of cyclohexene (1) in the presence of methanol leads to the molozonide 2, that opens to the zwitterion 3 which is trapped as the methoxy hydroperoxide 4. Addition of p-toluenesulfonic acid catalyzes the formation of the acetal 5. After neutralization with sodium bicarbonate, reduction of the hydroperoxide with dimethyl sulfide affords the monodimethyl acetal of adipaldehyde 6. Since acetals are base stable, Wolff-Kishner reduction of the aldehyde can be accomplished followed by aqueous acid hydrolysis of the acetal.