florian-hoenicke
commited on
Commit
•
a5dd68c
1
Parent(s):
dc4558d
feat: push custom dataset
Browse files- README.md +40 -0
- document_types.txt +3 -0
- samples_eval.jsonl +0 -0
- samples_train.jsonl +0 -0
- search_type.txt +1 -0
- topics.txt +398 -0
README.md
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---
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license: apache-2.0
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task_categories:
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- feature-extraction
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- sentence-similarity
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language:
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- en
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tags:
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- sentence-transformers
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- feature-extraction
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- sentence-similarity
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- mteb
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- Medical
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- Nutrition
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- Information
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- Retrieval
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- Dataset
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pretty_name: medical information retrieval
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size_categories:
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- n<1K
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---
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# NFCorpus-0-0-gpt-4o-2024-05-13-982705 Dataset
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## Dataset Description
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The dataset "medical information retrieval" is a generated dataset designed to support the development of domain specific embedding models for retrieval tasks.
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## Associated Model
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This dataset was used to train the [**NFCorpus-0-0-gpt-4o-2024-05-13-982705**](https://huggingface.co/fine-tuned/NFCorpus-0-0-gpt-4o-2024-05-13-982705) model.
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## How to Use
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To use this dataset for model training or evaluation, you can load it using the Hugging Face `datasets` library as follows:
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```python
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from datasets import load_dataset
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dataset = load_dataset("fine-tuned/NFCorpus-0-0-gpt-4o-2024-05-13-982705")
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print(dataset['test'][0])
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```
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document_types.txt
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natural language query
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medical document
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relevance judgment
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samples_eval.jsonl
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File without changes
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samples_train.jsonl
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File without changes
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search_type.txt
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medical information retrieval
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topics.txt
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BM25
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BM25F
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Bayesian
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Bibliographic
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Biochemistry
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Biocuration
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Bioengineering
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Bioethics
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Bioinformatics
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Biological
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Biomedical
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Biomedical Data
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Biomedical Documents
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Biomedical Informatics
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Biomedical Information Retrieval
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Biomedical Knowledge
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Biomedical Literature
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Biomedical Ontologies
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+
Biomedical Queries
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Biomedical Relevance Judgments
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Biomedical Research
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Biomedical Retrieval Systems
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Biomedical Search Engines
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Biomedical Text Analysis
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Biomedical Text Classification
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Biomedical Text Clustering
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Biomedical Text Extraction
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Biomedical Text Indexing
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Biomedical Text Mining
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Biomedical Text Processing
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Biomedical Text Retrieval Evaluation
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Biomedical Text Retrieval Metrics
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Biomedical Text Retrieval Models
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Biomedical Text Retrieval Systems Evaluation
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35 |
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Biomedical Text Retrieval Techniques
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Biomedical Text Retrieval Tools
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Biomedical Text Summarization
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Biomedical Texts
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Biomedicine
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Biometrics
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Biophysics
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Biostatistics
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Biotechnology
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Boolean
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Bootstrap
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Boteva
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Carcinogenicity
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Carcinoma
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Cardiomyopathy
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Cardiovascular
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Causal
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Causality
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Causation
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Cerebral
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Chemotherapy
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Cholesterol
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Chromosome
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Chronic
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Citation
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Clinical
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Clinician
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Cognitive
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Cohort
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Colonoscopy
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Comorbidity
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Compendium
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Complementary
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Complexity
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Compliance
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Comprehensive
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Computational
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Concordance
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Confounding
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Congenital
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Consensus
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Consortium
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Contingency
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Continuum
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Contraceptive
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Convergence
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Corpus
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Correlation
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83 |
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Corticosteroid
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Covariate
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Cranial
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Criterion
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Criticality
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Cross-sectional
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Cumulative
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Curative
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Cytokine
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Cytology
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Cytopathology
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Cytotoxicity
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Data Extraction
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Data Format
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97 |
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Data Retrieval
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Dataset
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Development Subset
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Direct Link
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Document Length
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102 |
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Documents Data
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Download
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ECIR
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Evaluation
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Experiments
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Extracted Relevance Judgments
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FAQ
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Factual
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File
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111 |
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Format
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112 |
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Full-Text
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113 |
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Functionality
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114 |
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Gholipour
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Greger
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Heidelberg
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Heuristic
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Hierarchical
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Hyperparameter
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Hypothesis
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IDF
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Indexing
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Inference
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Informatics
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Information
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Ingestion
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Initialization
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128 |
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Instance
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Integration
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Interoperability
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131 |
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Intervention
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Inverse
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Irrelevance
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134 |
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Judgment
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Judgments
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136 |
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Kappa
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137 |
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Kernel
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138 |
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Knowledge
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139 |
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Knowledge-based
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140 |
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Knowledge-driven
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141 |
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Knowledge-intensive
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142 |
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Knowledge-representation
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143 |
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Knowledge-sharing
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144 |
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Knowledge-transfer
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Kullback-Leibler
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Learning
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147 |
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Learning to Rank
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148 |
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Level
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149 |
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Link
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150 |
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Links
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Literature
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MD5
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153 |
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Medical
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154 |
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Medical Documents
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155 |
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Medical Information Retrieval
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156 |
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Methodology
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157 |
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Michael Greger
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158 |
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NDCG
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159 |
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NFCorpus
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160 |
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NIST
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161 |
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NLP
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162 |
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Natural Language Processing
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163 |
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Natural Language Queries
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164 |
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Non-technical English
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165 |
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NutritionFacts.org
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166 |
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Padova
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167 |
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Paper
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168 |
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Parameters
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169 |
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Partitioning
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170 |
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Pathology
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171 |
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Patient
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172 |
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Pediatric
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173 |
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Peer-reviewed
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174 |
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Pharmacology
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175 |
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Phenotype
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176 |
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Physiology
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177 |
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Pipeline
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178 |
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Plagiarism
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179 |
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Platform
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180 |
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Population
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181 |
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Postdoctoral
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182 |
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Precision
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183 |
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Preprocessing
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184 |
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Prevalence
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185 |
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Probability
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186 |
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Proceedings
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187 |
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PubMed
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188 |
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Publication
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189 |
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Quality
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190 |
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Quantitative
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191 |
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Quantization
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192 |
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Quantum
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193 |
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Quasi-experimental
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194 |
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Queries
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195 |
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Query
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196 |
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Query Level
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197 |
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Query-Document Pairs
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198 |
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Query-document
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199 |
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Query-level
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200 |
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Querying
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201 |
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Questionnaire
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202 |
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Queueing
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203 |
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Quorum
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204 |
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RNA Sequencing
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205 |
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Radiology
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206 |
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Random Split
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207 |
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Randomization
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208 |
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Rank Dataset
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209 |
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Rarefaction
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210 |
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Reagent
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211 |
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Receptor
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212 |
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Recombinant
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213 |
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Reconstitution
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214 |
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Rectification
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215 |
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Recurrence
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216 |
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Redundancy
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217 |
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Refinement
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218 |
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Regeneration
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219 |
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Regression
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220 |
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Regulation
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221 |
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Rehabilitation
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222 |
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Reinforcement
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223 |
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Rejuvenation
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224 |
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Relapse
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225 |
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Relevance Assessment
|
226 |
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Relevance Evaluation
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227 |
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Relevance Feedback
|
228 |
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Relevance Judgments
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229 |
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Relevance Levels
|
230 |
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Relevance Metrics
|
231 |
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Relevance Model
|
232 |
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Relevance Ranking
|
233 |
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Relevance Ranking Model
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234 |
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Relevance Score Calculation
|
235 |
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Relevance Score Distribution
|
236 |
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Relevance Score Normalization
|
237 |
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Relevance Scores
|
238 |
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Relevance Thresholds
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239 |
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Reliability
|
240 |
+
Remediation
|
241 |
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Remission
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242 |
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Renal
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243 |
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Reperfusion
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244 |
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Replication
|
245 |
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Repression
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246 |
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Reproducibility
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247 |
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Research
|
248 |
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Research Paper
|
249 |
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Resection
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250 |
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Reservoir
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251 |
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Resistance
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252 |
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Resolution
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253 |
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Resonance
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254 |
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Respiration
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255 |
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Restoration
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256 |
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Restriction
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257 |
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Results Analysis
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258 |
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Retina
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259 |
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Retraction
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260 |
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Retrieval Data Set
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261 |
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Retrieval Experiments
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262 |
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Retrovirus
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263 |
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Revascularization
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264 |
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Revitalization
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265 |
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Rheology
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266 |
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Rheumatology
|
267 |
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Ribonucleic
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268 |
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Ribonucleotide
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269 |
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Ribosome
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270 |
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Risk Assessment
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271 |
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Rodenticide
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272 |
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Rubella
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273 |
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Salient
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274 |
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Sample
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275 |
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Sampling
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276 |
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Scalability
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277 |
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Scalable
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278 |
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Schema
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279 |
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Scientific
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280 |
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Scope
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281 |
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Search
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282 |
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Segmentation
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283 |
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Semantic
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284 |
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Semantics
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285 |
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Sensitivity
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286 |
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Sequence
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287 |
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Sequential
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288 |
+
Server
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289 |
+
Service
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290 |
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Session
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291 |
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Similarity
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292 |
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Simulation
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293 |
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Single-linkage
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294 |
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Source
|
295 |
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Sparse
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296 |
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Specialization
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297 |
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Specification
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298 |
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Spectral
|
299 |
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Speech
|
300 |
+
Statistical
|
301 |
+
Statistics
|
302 |
+
Storage
|
303 |
+
Stream
|
304 |
+
Structured
|
305 |
+
Subgraph
|
306 |
+
Subnetwork
|
307 |
+
Subset
|
308 |
+
Subspace
|
309 |
+
Supervised
|
310 |
+
Support
|
311 |
+
Syntactic
|
312 |
+
Syntax
|
313 |
+
System-level
|
314 |
+
System-wide
|
315 |
+
Systematic
|
316 |
+
Systemic
|
317 |
+
Systemization
|
318 |
+
Systemized
|
319 |
+
Systolic
|
320 |
+
Tagging
|
321 |
+
Taxonomy
|
322 |
+
Technical
|
323 |
+
Terminology
|
324 |
+
Testing
|
325 |
+
Textual
|
326 |
+
Tfidf
|
327 |
+
Thesaurus
|
328 |
+
Threshold
|
329 |
+
Topic
|
330 |
+
Training
|
331 |
+
Transcription
|
332 |
+
Transformation
|
333 |
+
Translation
|
334 |
+
Trec_eval
|
335 |
+
Treemaps
|
336 |
+
URL
|
337 |
+
Unigram
|
338 |
+
Validation
|
339 |
+
Vectorization
|
340 |
+
Vocabulary
|
341 |
+
Webpage
|
342 |
+
Weighting
|
343 |
+
XML
|
344 |
+
YAML
|
345 |
+
ablation
|
346 |
+
absorption
|
347 |
+
abstract
|
348 |
+
academic
|
349 |
+
acceleration
|
350 |
+
accessibility
|
351 |
+
accuracy
|
352 |
+
acetylcholine
|
353 |
+
acidification
|
354 |
+
acquisition
|
355 |
+
activation
|
356 |
+
adaptation
|
357 |
+
adaptive
|
358 |
+
adenocarcinoma
|
359 |
+
adhesion
|
360 |
+
adjuvant
|
361 |
+
adrenaline
|
362 |
+
aerobic
|
363 |
+
affinity
|
364 |
+
aggregation
|
365 |
+
algorithm
|
366 |
+
algorithmic
|
367 |
+
alignment
|
368 |
+
allele
|
369 |
+
annotation
|
370 |
+
anomaly
|
371 |
+
antibody
|
372 |
+
application
|
373 |
+
architecture
|
374 |
+
archive
|
375 |
+
artificial
|
376 |
+
assessment
|
377 |
+
association
|
378 |
+
asymptomatic
|
379 |
+
attribute
|
380 |
+
augmentation
|
381 |
+
authenticity
|
382 |
+
authoritative
|
383 |
+
autoimmune
|
384 |
+
automation
|
385 |
+
availability
|
386 |
+
average
|
387 |
+
avidity
|
388 |
+
axial
|
389 |
+
axiomatic
|
390 |
+
azimuthal
|
391 |
+
natural language queries
|
392 |
+
non-technical English
|
393 |
+
nutrition
|
394 |
+
nutritionfacts
|
395 |
+
nutritionfacts.org
|
396 |
+
nutritionfacts.org data
|
397 |
+
nutritionfacts.org queries
|
398 |
+
nutritionfacts.org website
|