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Research ArticleResearch Article
A Novel Signaling Pathway Controlling Induced Systemic Resistance in Arabidopsis
Corné M. J. Pieterse, Saskia C. M. van Wees, Johan A. van Pelt, Marga Knoester, Ramon Laan, Han Gerrits, Peter J. Weisbeek, Leendert C. van Loon
Corné M. J. Pieterse
aSection of Plant Pathology, Department of Plant Ecology and Evolutionary Biology, Utrecht University, Sorbonnelaan 16, 3584 CA, Utrecht, The Netherlands
For correspondence: c.m.j.pieterse@bio.uu.nl
Saskia C. M. van Wees
Johan A. van Pelt
Marga Knoester
Ramon Laan
Han Gerrits
bDepartment of Molecular Cell Biology, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands
Peter J. Weisbeek
Leendert C. van Loon
Published September 1998. DOI: https://doi.org/10.1105/tpc.10.9.1571
© 1998 American Society of Plant Physiologists
Plants have the ability to acquire an enhanced level of resistance to pathogen attack after being exposed to specific biotic stimuli. In Arabidopsis, nonpathogenic, root-colonizing Pseudomonas fluorescens bacteria trigger an induced systemic resistance (ISR) response against infection by the bacterial leaf pathogen P. syringae pv tomato. In contrast to classic, pathogen-induced systemic acquired resistance (SAR), this rhizobacteria-mediated ISR response is independent of salicylic acid accumulation and pathogenesis-related gene activation. Using the jasmonate response mutant jar1, the ethylene response mutant etr1, and the SAR regulatory mutant npr1, we demonstrate that signal transduction leading to P. fluorescens WCS417r–mediated ISR requires responsiveness to jasmonate and ethylene and is dependent on NPR1. Similar to P. fluorescens WCS417r, methyl jasmonate and the ethylene precursor 1-aminocyclopropane-1-carboxylate were effective in inducing resistance against P. s. tomato in salicylic acid–nonaccumulating NahG plants. Moreover, methyl jasmonate–induced protection was blocked in jar1, etr1, and npr1 plants, whereas 1-aminocyclopropane-1-carboxylate–induced protection was affected in etr1 and npr1 plants but not in jar1 plants. Hence, we postulate that rhizobacteria-mediated ISR follows a novel signaling pathway in which components from the jasmonate and ethylene response are engaged successively to trigger a defense reaction that, like SAR, is regulated by NPR1. We provide evidence that the processes downstream of NPR1 in the ISR pathway are divergent from those in the SAR pathway, indicating that NPR1 differentially regulates defense responses, depending on the signals that are elicited during induction of resistance.
Plants of which the roots have been colonized by selected strains of nonpathogenic fluorescent Pseudomonas spp develop an enhanced level of protection against pathogen attack (reviewed in van Loon et al., 1998). Strain WCS417r of P. fluorescens is a biological control strain that has been shown to trigger an induced systemic resistance (ISR) response in several plant species, including carnation (van Peer et al., 1991), radish (Leeman et al., 1995), tomato (Duijff et al., 1996), and Arabidopsis (Pieterse et al., 1996). In Arabidopsis, P. fluorescens WCS417r–mediated ISR has been demonstrated against the bacterial leaf pathogen P. syringae pv tomato, the fungal root pathogen Fusarium oxysporum f sp raphani (Pieterse et al., 1996; van Wees et al., 1997), and the fungal leaf pathogen Peronospora parasitica (J. Ton and C.M.J. Pieterse, unpublished data), indicating that this type of biologically induced resistance is effective against different types of pathogens.
ISR-inducing rhizobacteria show host specificity in regard to eliciting resistance (Leeman et al., 1995; van Wees et al., 1997), which indicates that specific recognition between protective bacteria and the plant is a prerequisite for the activation of the signaling cascade leading to ISR. The downstream signaling events in the rhizobacteria-mediated ISR pathway clearly differ from those in the pathway leading from pathogen infection to classic systemic acquired resistance (SAR). SAR is a form of systemically induced disease resistance that is triggered upon infection by a necrotizing pathogen (reviewed in Ryals et al., 1996). The state of SAR is characterized by an early increase in endogenously synthesized salicylic acid (SA; Malamy et al., 1990; Métraux et al., 1990) and the concomitant activation of genes encoding pathogenesis-related (PR) proteins (Ward et al., 1991). SA-nonaccumulating NahG plants expressing the bacterial salicylate hydroxylase (nahG) gene are incapable of developing SAR and do not show PR gene activation upon pathogen infection, indicating that SA is a necessary intermediate in the SAR signaling pathway (Gaffney et al., 1993; Delaney et al., 1994). In contrast to pathogen-induced SAR, rhizobacteria-mediated ISR is not associated with the activation of PR genes (Hoffland et al., 1995; Pieterse et al., 1996; van Wees et al., 1997). Moreover, NahG plants that are unable to express SAR develop normal levels of ISR after treatment of the roots with ISR-inducing rhizobacteria (Pieterse et al., 1996; Press et al., 1997; van Wees et al., 1997). This demonstrates that biologically induced disease resistance can be controlled by at least two pathways that diverge in their requirement for SA accumulation.
Besides SA, the plant growth regulators jasmonic acid and ethylene have been implicated in plant defense responses (Boller, 1991; Wasternack and Parthier, 1997). Jasmonic acid and derivatives, collectively referred to as jasmonates, induce the expression of genes encoding defense-related proteins, such as thionins (Epple et al., 1995) and proteinase inhibitors (Farmer et al., 1992), whereas ethylene activates several members of the PR gene superfamily (Brederode et al., 1991; Potter et al., 1993). Jasmonate and ethylene also have been shown to act synergistically in stimulating elicitor-induced PR gene expression (Xu et al., 1994). Moreover, both regulators are implicated in the activation of genes encoding plant defensins (Penninckx et al., 1996) and enzymes involved in phytoalexin biosynthesis (Ecker and Davis, 1987; Gundlach et al., 1992). Both jasmonate and ethylene have been reported to be involved in systemically induced defense responses (van Loon, 1977; Farmer and Ryan, 1992; Penninckx et al., 1996), although their role is in many cases still unclear.
Several Arabidopsis mutants affected in their response to the signaling molecules jasmonate, ethylene, or SA have been characterized in the past years. To gain more insight into the signaling pathway controlling nonpathogenic rhizobacteria-mediated ISR, we examined whether the jasmonate response mutant jar1 (Staswick et al., 1992), the ethylene response mutant etr1 (Bleecker et al., 1988), and the SAR regulatory mutant npr1 (Cao et al., 1994) are able to express ISR after colonization of the roots by P. fluorescens WCS417r. Mutant jar1 exhibits reduced sensitivity to methyl jasmonate (MeJA), leading to a decrease in MeJA-inducible inhibition of primary root growth and MeJA-inducible accumulation of a vegetative storage protein (Staswick et al., 1992). Mutant etr1 (Bleecker et al., 1988) is altered in its ability to perceive and react to ethylene due to a mutation in the ETR1 gene, encoding an ethylene receptor (Chang et al., 1993; Schaller and Bleecker, 1995). Arabidopsis jar1 plants, as well as ethylene-insensitive tobacco plants expressing the mutant Arabidopsis ETR1 gene, are susceptible to opportunistic microorganisms (http://www.sheridan.com/aspp/abs/60/1458.html; Knoester et al., 1998), whereas wild-type plants show a resistant phenotype, indicating that both mutations affect signaling events leading to disease resistance. Arabidopsis mutants npr1, nim1, and sai1 are affected downstream of SA in the SAR signaling pathway and as a result are blocked in the SAR response (Cao et al., 1994; Delaney et al., 1995; Shah et al., 1997). The genes involved are allelic and code for an ankyrin repeat–containing protein with homology to the mammalian signal transduction factor IκBα, which is implicated in disease resistance responses in a wide range of higher organisms (Cao et al., 1997; Ryals et al., 1997).
Using the Arabidopsis mutants jar1, etr1, and npr1, we demonstrate that P. fluorescens WCS417r–mediated ISR against P. s. tomato in Arabidopsis follows a novel signaling pathway that is dependent on responsiveness to both jasmonate and ethylene. Moreover, we show that similar to SAR, the regulatory protein NPR1 plays a crucial role in the expression of ISR.
Rhizobacteria-Mediated ISR Requires Components of the Jasmonate and Ethylene Response
To investigate whether jasmonate and/or ethylene play a role in rhizobacteria-mediated ISR, we tested the jasmonate response mutant jar1 and the ethylene response mutant etr1 for their ability to develop biologically induced resistance against infection by P. s. tomato. Wild-type Columbia (Col-0) plants, transgenic SA-nonaccumulating NahG plants, and mutant jar1 and etr1 plants were grown in soil containing ISR-inducing P. fluorescens WCS417r bacteria. Another subset of plants received SAR treatment by inoculating three lower leaves with the avirulent pathogen P. s. tomato carrying avrRpt2 (Whalen et al., 1991) 3 days before challenge inoculation with a virulent strain of P. s. tomato. Control plants received no treatment before challenge. Figure 1 shows that in wild-type Col-0 plants, colonization of the roots by P. fluorescens WCS417r and predisposing infection with P. s. tomato carrying avrRpt2 resulted in a significant reduction of symptoms 4 days after challenge inoculation with P. s. tomato. Moreover, in Col-0 plants pretreated with avirulent P. s. tomato or P. fluorescens WCS417r, growth of the challenging pathogen was inhibited (Table 1), indicating that P. fluorescens WCS417r–mediated ISR and pathogen-induced SAR were triggered in these plants.
Figure 1 and Table 1 show that SA-nonaccumulating NahG plants mounted resistance against P. s. tomato infection after P. fluorescens WCS417r treatment but not after preinfection with the avirulent pathogen. Furthermore, only plants expressing SAR concomitantly showed accumulation of PR-1 transcripts (Figure 1), whereas plants expressing ISR did not, confirming that ISR and SAR are controlled by distinct signaling pathways that diverge in their requirement for SA. Both jar1 and etr1 plants developed SAR after preinoculation with the avirulent P. s. tomato strain and showed activation of PR-1 gene expression (Figure 1), supporting previous findings (Lawton et al., 1995, 1996) that SAR signal transduction in Arabidopsis does not require components of the jasmonate or ethylene response. However, neither jar1 nor etr1 plants developed ISR when roots were colonized by P. fluorescens WCS417r, indicating that an intact response to both jasmonate and ethylene is required for the development of rhizobacteria-mediated ISR. Evidently, both of the phytohormones jasmonate and ethylene play a crucial role in the ISR signaling pathway but SA does not.
Quantification of ISR and SAR against P. s. tomato Infection in Arabidopsis Col-0, NahG, jar1, etr1, and npr1 Plants and Analysis of PR-1 Gene Expression.
Shown at top is the disease index of control plants (Ctrl) and plants that received an ISR or SAR treatment. The disease index is the mean (n = 20 plants) of the percentage of leaves with symptoms relative to control plants (100%) 4 days after challenge inoculation with the virulent pathogen P. s. tomato. The absolute proportions of diseased leaves of control-treated Col-0, NahG, jar1, etr1, and npr1 plants were 60.1, 82.9, 80.6, 60.2, and 68.0%, respectively. Within each frame, different letters indicate statistically significant differences between treatments (Fisher's LSD test; α = 0.05). Plants treated with ISR-inducing bacteria were grown in soil containing P. fluorescens WCS417r. SAR was induced 3 days before challenge inoculation by infiltrating three leaves per plant with the avirulent pathogen P. s. tomato carrying avrRpt2. Shown below are ethidium bromide–stained agarose gels with competitive RT-PCR products obtained after amplification of equal portions of first-strand cDNA and 500 pg of heterologous competitor DNA (comp. DNA) by using PR-1–specific primers. First-strand cDNA was synthesized on mRNA that was isolated from leaves of the indicated plant and treatment combinations that were harvested just before challenge inoculation. The data shown are taken from representative experiments that were repeated at least twice with similar results.
Rhizobacteria-Mediated ISR Is Dependent on NPR1
NPR1 has been shown to be an important regulatory factor in the SA-dependent SAR response (Cao et al., 1994). To investigate whether NPR1 is involved in the SA-independent ISR response as well, we tested the Arabidopsis mutant npr1. Figure 1 and Table 1 show that npr1 plants failed to develop SAR and did not show PR-1 gene activation after predisposing infection with the avirulent P. s. tomato strain, confirming that the SAR response was effectively blocked in these plants. Surprisingly, npr1 plants were also affected in the expression of P. fluorescens WCS417r–mediated ISR, indicating that both types of biologically induced disease resistance are dependent on NPR1.
Colonization of the Rhizosphere by P. fluorescens WCS417r
To investigate whether the inability to express ISR in the mutants was caused by insufficient colonization of the rhizosphere by P. fluorescens WCS417r, we determined the number of rifampicin-resistant P. fluorescens WCS417r bacteria per gram of root fresh weight at the end of each bioassay. Table 2 shows that P. fluorescens WCS417r colonizes the rhizosphere of Col-0, NahG, jar1, etr1, and npr1 plants with equal efficiency. Thus, the loss of the capacity to express P. fluorescens WCS417r–mediated ISR in jar1, etr1, and npr1 plants is not caused by changes in bacterial root colonization but must be the result of alterations in properties of the mutants.
Number of P. s. tomato Bacteria in Challenged Leaves of Control Plants and P. fluorescens WCS417r– and Avirulent P. s. tomato–Treated Arabidopsis Plants
Colonization of the Rhizosphere of Arabidopsis Col-0, NahG, jar1, etr1, and npr1 Plants by P. fluorescens WCS417r
Sequence of Signaling Events
To elucidate the sequence of the signaling events involved in the jasmonate-, ethylene-, and NPR1-dependent ISR response, we tested the resistance-inducing ability of MeJA and 1-aminocyclopropane-1-carboxylate (ACC), the natural precursor of ethylene, in Col-0, NahG, jar1, etr1, and npr1 plants. Figure 2A shows that applied ACC was readily converted to ethylene by endogenous ACC oxidase activity. H2O- and MeJA-treated plants showed basal levels of ethylene production, whereas in ACC-treated plants, a 10- to 25-fold increase in ethylene production was observed (Figure 2B). As shown in Figure 2C, pretreatment of Col-0 plants with MeJA or ACC resulted in a 50% reduction of the symptoms caused by P. s. tomato infection. Table 3 shows that growth of P. s. tomato was inhibited as well, indicating that the observed reduction of symptoms is caused by the activation of a resistance response.
Application of MeJA or ACC to NahG plants also resulted in a reduction of symptoms, although the level of protection was somewhat lower than that observed in wild-type Col-0 plants. In jar1 plants, application of MeJA did not elicit a resistance response, whereas application of ACC resulted in wild-type levels of protection. Mutant etr1 plants were non-responsive to ACC treatment but also failed to respond to MeJA-treatment, indicating that components of the ethylene response act downstream of jasmonate in the signaling pathway leading to protection against P. s. tomato. In npr1 plants, responsiveness to MeJA or ACC was blocked and strongly reduced, respectively, indicating that components of the jasmonate and ethylene response act upstream of NPR1 in regulating the expression of induced resistance against P. s. tomato.
Ethylene Production and Quantification of Induced Protection in MeJA- and ACC-Treated Arabidopsis Plants.
(A) Ethylene production in leaves of Arabidopsis ecotype Col-0 after treatment of the leaves with different concentrations of ACC. Data points are means (microliters of ethylene produced per gram fresh weight [FW] of leaf tissue in the first 24 hr after treatment) with standard errors from three independent samples that received the same treatment.
(B) Ethylene production in leaves of Col-0, NahG, jar1, etr1, and npr1 plants in the first 24 hr after treatment with H2O, 100 μM MeJA, or 1 mM ACC. Bars represent standard errors from six independent samples that received the same treatment.
(C) MeJA- and ACC-mediated protection against P. s. tomato in Col-0, NahG, jar1, etr1, and npr1 plants. Plants were pretreated with H2O, 100 μM MeJA, or 1 mM ACC 3 days before challenge inoculation with P. s. tomato. Four days after challenge inoculation, the disease index was determined (see legend to Figure 1). The absolute proportions of diseased leaves of control-treated Col-0, NahG, jar1, etr1, and npr1 plants were 49.9, 78.2, 74.8, 61.0, and 70.0%, respectively. Within each frame, different letters indicate statistically significant differences between treatments (Fisher's LSD test; n = 20; α = 0.05).
Number of P. s. tomato Bacteria in Challenged Leaves of Control Plants and MeJA- and ACC-Treated Arabidopsis Col-0 Plants
ISR Is Not Associated with Jasmonate- and Ethylene-Responsive Gene Activation
The involvement of components from the jasmonate and ethylene response in rhizobacteria-mediated ISR suggests that ISR might be associated with jasmonate- and ethylene-induced processes. To investigate whether treatment with P. fluorescens WCS417r stimulates known jasmonate- or ethylene-inducible responses, we studied the expression of the jasmonate-inducible gene Atvsp, encoding a vegetative storage protein (Berger et al., 1995), the ethylene-inducible Hel gene, encoding a hevein-like protein with antifungal activity (Potter et al., 1993), and the jasmonate- and ethylene-inducible plant defensin gene Pdf1.2, encoding a small protein with antifungal activity (Penninckx et al., 1996). Figure 3 shows that application of MeJA or ACC to the leaves activated the expression of the Atvsp or Hel gene, respectively, demonstrating that both MeJA and ACC triggered their corresponding response pathway specifically. As expected, both MeJA and ACC induced Pdf1.2 transcript accumulation in the leaves. However, in roots and leaves of P. fluorescens WCS417r–induced plants, no increase in Atvsp, Hel, or Pdf1.2 transcript levels was detected, indicating that the expression of P. fluorescens WCS417r–mediated ISR does not coincide with a strong stimulation of the jasmonate and ethylene response.
We demonstrated previously that plants expressing pathogen-induced SAR or rhizobacteria-mediated ISR against P. s. tomato infection develop significantly fewer symptoms compared with noninduced plants and show a strong inhibition of pathogen growth in the leaves (Pieterse et al., 1996; van Wees et al., 1997). Despite these phenotypical similarities, the signaling pathways leading to both biologically induced resistance responses diverge in their requirement for SA. Moreover, the expression of SAR is accompanied by the activation of PR genes, whereas this response is lacking during expression of ISR (Pieterse et al., 1996). In this study, we used well-characterized Arabidopsis mutants in our attempt to elucidate the steps involved in the SA-independent signaling pathway controlling rhizobacteria-mediated ISR. Systemic resistance induced by nonpathogenic rhizobacteria was blocked in the Arabidopsis mutants jar1, etr1, and npr1 (Figure 1 and Table 1), indicating that components of the jasmonate and ethylene response as well as NPR1 play a crucial role in the ISR signaling pathway. Consistent with our observations, Lawton et al. (1995, 1996) previously demonstrated that both jar1 and etr1 are not impaired in their ability to develop SAR. Thus, the rhizobacteria-mediated ISR and pathogen-induced SAR signaling pathways diverge in their requirement for SA, on the one hand, and for jasmonate and ethylene, on the other hand.
Several lines of evidence indicate that MeJA- and ACC-induced protection against P. s. tomato follow the same signaling pathway as P. fluorescens WCS417r–mediated ISR. First, P. fluorescens WCS417r, MeJA, and ACC induce resistance against P. s. tomato in NahG plants (Figures 1 and 2C), indicating that these agents activate an SA-independent resistance mechanism. This is supported by the fact that P. fluorescens WCS417r–, MeJA- and ACC-treated plants do not show an increase in SA-inducible PR-1 gene expression (Figure 3). The level of protection in NahG plants after induction by these agents was lower compared with that observed in wild-type Col-0 plants. This may be due to the fact that NahG plants are more susceptible to pathogen infection (Delaney et al., 1994; Figures 1 and 2, and Table1), resulting in a lower efficacy of the ISR-inducing agents. Nevertheless, a modulating role of SA in the ISR response cannot be ruled out. The second line of evidence indicating that P. fluorescens WCS417r, MeJA, and ACC trigger the same signaling pathway controlling induced resistance against P. s. tomato is the observation that resistance induced by these three agents requires responsiveness to ethylene and is dependent on NPR1 to be fully expressed. All together, this strongly suggests that resistance induced by P. fluorescens WCS417r, MeJA, or ACC is reached by activating the same defense pathway.
Expression of Jasmonate-, Ethylene-, and SA-Inducible Genes in Response to P. fluorescens WCS417r, MeJA, ACC, and SA Treatment.
The results of RNA gel blot analysis of Atvsp, Hel, Pdf1.2, and PR-1 gene expression are shown. Roots and leaves of plants that were grown in soil supplemented with 10 mM MgSO4 (Ctrl) or P. fluorescens WCS417r bacteria (WCS417r) were harvested when the plants were 5 weeks old. Chemical treatments were performed by dipping the leaves of 5-week-old plants in a solution containing 0.01% (v/v) Silwet L-77 and MeJA (100 μM), ACC (1 mM), or SA (5 mM). Control leaves were treated with 0.01% (v/v) Silwet L-77 only. Chemically treated leaves were harvested 2 days after the application of the chemicals. Arabidopsis Atvsp, Hel, Pdf1.2, and PR-1 gene-specific probes were used for RNA gel blot hybridizations.
Using MeJA and ACC as inducing agents, we determined the sequence of signaling events involved in the pathway leading to resistance against P. s. tomato. Figure 2C clearly shows that MeJA-mediated protection against P. s. tomato requires an intact response to ethylene, whereas ACC is fully active in jar1 plants. Hence, components of the ethylene response act downstream of jasmonate. Moreover, MeJA- and ACC-induced protection are blocked or highly diminished in npr1 plants, indicating that NPR1 acts downstream of jasmonate and ethylene in the signaling pathway leading to resistance against P. s. tomato. Therefore, we postulate that during signal transduction leading to P. fluorescens WCS417r–mediated ISR, the jasmonate and ethylene responses are engaged successively to trigger a defense response that is regulated by NPR1 (Figure 4).
The observation that ACC-mediated protection was not completely blocked in npr1 plants (Figure 2C) suggests the existence of a parallel ethylene-inducible defensive pathway that does not require NPR1. A candidate pathway might be the ethylene-inducible pathway leading to Pdf1.2 gene expression that has been shown to be NPR1 independent (Penninckx et al., 1996). Alternatively, this low level of protection in npr1 plants may be caused by the twofold higher production of ethylene after ACC treatment (Figure 2B). However, the latter possibility seems unlikely because a twofold increase in ethylene production in wild-type Col-0 plants, by applying 2.5 mM ACC to the leaves instead of 1 mM, does not result in a higher level of protection against P. s. tomato infection (S.C.M. van Wees, unpublished results). In itself, the enhanced level of ethylene production in ACC-treated npr1 plants is intriguing because it demonstrates that npr1 plants show twofold higher ACC oxidase activity than do wild-type plants. Interestingly, pathogen infection also causes a significantly higher increase in ethylene production in npr1 plants (C.M.J. Pieterse, unpublished results), suggesting that not only SA responsiveness but also ethylene metabolism is altered by the npr1 mutation.
Elicitation of a similar SA-independent defense pathway against P. s. tomato infection by P. fluorescens WCS417r, MeJA, and ACC implies that ISR is associated with an increase in the production of jasmonate or ethylene. However, P. fluorescens WCS417r–mediated ISR does not coincide with jasmonate- and ethylene-responsive gene expression (Figure 3), suggesting that the production of jasmonate and ethylene is not strongly stimulated. When plants were treated with lower concentrations of MeJA or ACC (25 μM and 0.25 mM rather than 100 μM and 1 mM, respectively), they clearly developed enhanced protection against P. s. tomato, without activating Atvsp, Hel, or Pdf1.2 gene expression (S.C.M. van Wees, unpublished results). Hence, P. fluorescens WCS417r–mediated ISR may involve a moderate or localized stimulation of the jasmonate and ethylene response that is below the threshold level needed for Atvsp, Hel, and Pdf1.2 gene activation. Nevertheless, it cannot be ruled out that simply the availability of jasmonate and ethylene signaling intermediates is sufficient to facilitate induction of ISR. Recently, Schweizer et al. (1997) demonstrated that during infection of rice with the fungal pathogen Magnaporthe grisea, jasmonate-inducible genes are activated without an increase in endogenous jasmonate levels. Moreover, Tsai et al. (1996) provided evidence that an increase in ethylene sensitivity rather than ethylene production is the initial event to trigger jasmonate-enhanced senescence in detached rice leaves. Thus, ethylene- and jasmonate-dependent plant responses can be triggered without a concomitant increase in the levels of these phytohormones. Whether enhanced sensitivity to either jasmonate or ethylene plays a role in rhizobacteria-mediated ISR needs to be elucidated.
Proposed Model for the Nonpathogenic Rhizobacteria-Mediated ISR Signaling Pathway as Part of the Network of Pathways Controlling Biologically Induced Systemic Resistance.
P. fluorescens WCS417r bacteria trigger an SA-independent pathway in which components from the jasmonate (JA) and ethylene response act in sequence to activate a systemic resistance response that is dependent on the regulatory protein NPR1. The ISR pathway shares signaling events that are initiated upon pathogen infection but is not associated with PR or Pdf1.2 gene expression. This indicates that P. fluorescens WCS417r bacteria trigger a novel signaling pathway and that resistance induced by these nonpathogenic rhizobacteria involves the production of thus far unidentified defensive compounds that are active against P. s. tomato. The NPR1-dependent pathway controlling PR gene expression and the NPR1-independent pathway leading to Pdf1.2 gene expression are according to Ryals et al. (1996) and Penninckx et al. (1996), respectively.
Pathogen-induced systemic activation of the Arabidopsis plant defensin gene Pdf1.2 is independent of SA and requires components from both the jasmonate- and the ethylene-response pathways (Penninckx et al., 1996). Therefore, this defense reaction appears to share specific signaling events with P. fluorescens WCS417r–mediated ISR. However, the latter is not associated with an increase in Pdf1.2 transcript levels (Figure 3). Moreover, signal transduction leading to Pdf1.2 gene activation was reported to be independent of NPR1 (Penninckx et al., 1996), whereas P. fluorescens WCS417r–mediated ISR requires NPR1 (Figure 1). Thus, the corresponding signaling pathways must be dissimilar (Figure 4). Recently, analysis of the SAR signal transduction mutant cpr5 revealed that the signaling pathways controlling NPR1-dependent SAR and NPR1-independent Pdf1.2 gene expression are connected in early signal transduction steps and branch upstream of SA (Bowling et al., 1997). Here, we show that the ISR pathway is connected with that of SAR as well in that they both require NPR1. Apparently, biologically induced systemic resistance responses in plants are connected via a complex network of signaling pathways that involve that not only SA but also the concerted action of jasmonate and ethylene (Figure 4).
Mutant npr1 was originally isolated in a screen for SAR mutants that are blocked in the response pathway leading from SA to PR gene activation (Cao et al., 1994). Although ISR is independent of SA accumulation and is not associated with PR gene activation, this resistance response is blocked in mutant npr1 as well. Hence, NPR1 is not only required for the SA-dependent expression of PR genes that are activated during SAR but also for the jasmonate- and ethylene-dependent activation of thus far unidentified defense responses that are involved in rhizobacteria-mediated ISR. Thus, NPR1 differentially regulates defense gene expression, depending on the signaling pathway that is activated upstream of it. Future research should reveal the molecular basis underlying this phenomenon.
Induced systemic resistance (ISR)–inducing Pseudomonas fluorescens WCS417r bacteria (van Peer et al., 1991) were grown on King's medium B agar plates (King et al., 1954) for 24 hr at 28°C. The bacterial cells were collected, resuspended in 10 mM MgSO4, and adjusted to a concentration of 109 colony-forming units (cfu) per mL (OD600 = 1.0) before mixing throughout the soil.
The avirulent pathogen P. syringae pv tomato DC3000 carrying a plasmid with avirulence gene avrRpt2 (Whalen et al., 1991) was used for induction of systemic acquired resistance (SAR). Bacteria were cultured overnight at 28°C in liquid King's medium B (King et al., 1954) supplemented with 20 mg/L tetracycline to select for the plasmid. The bacterial cells were collected by centrifugation, resuspended in 10 mM MgSO4, and adjusted to a concentration of 107 cfu/mL before pressure infiltration into the leaves.
The virulent pathogen P. s. tomato DC3000 without the plasmid carrying avrRpt2 (Whalen et al., 1991) was used for challenge inoculations. P. s. tomato bacteria were grown overnight in liquid King's medium B at 28°C. After centrifugation, bacterial cells were resuspended to a final concentration of 2.5 × 107 cfu/mL in 10 mM MgSO4 containing 0.01% (v/v) of the surfactant Silwet L-77 (van Meeuwen Chemicals BV, Weesp, The Netherlands).
Cultivation of Plants
Seeds of wild-type Arabidopsis thaliana ecotype Columbia (Col-0) plants, transgenic NahG plants harboring the bacterial nahG gene (Delaney et al., 1994), and mutant jar1 (Staswick et al., 1992), etr1 (Bleecker et al., 1988), and npr1 plants (Cao et al., 1994) were sown in quartz sand. Two-week-old seedlings were transferred to 60-mL pots containing a sand and potting soil mixture that had been autoclaved twice for 1 hr. Plants were cultivated in a growth chamber with a 9-hr day (200 μE m−2 sec−1 at 24°C) and 15-hr night (20°C) cycle and 70% relative humidity. Plants were watered on alternate days and once a week were supplied with modified half-strength Hoagland's nutrient solution (2 mM KNO3, 5 mM Ca[NO3]2, 1 mM KH2PO4, 1 mM MgSO4, and trace elements, pH 7; Hoagland and Arnon, 1938) containing 10 μM Sequestreen (Novartis, Basel, Switzerland).
Induction Treatments
Plants were treated with nonpathogenic, ISR-inducing rhizobacteria by mixing a suspension of P. fluorescens WCS417r bacteria throughout the soil to a final density of 5 × 107 cfu/kg just before the seedlings were planted as described by Pieterse et al. (1996).
SAR was induced 3 days before challenge inoculation by pressure infiltrating three lower leaves per plant with the avirulent pathogen P. s. tomato carrying avrRpt2 at 107 cfu/mL in 10 mM MgSO4 by using a 1-mL syringe without a needle, as described by Swanson et al. (1988).
Chemical treatments were performed 3 days before challenge inoculation by dipping the leaves of 5-week-old plants in a solution containing 0.01% (v/v) Silwet L-77 and either methyl jasmonate (MeJA; 100 μM), salicylic acid (SA; 5 mM), or 1-aminocyclopropane-1-carboxylate (ACC; 0.25, 0.5, 1.0, 2.5, or 5.0 mM), pH 6. Control plants were treated with 0.01% (v/v) Silwet L-77 only. MeJA was purchased from Serva, Brunschwig Chemie (Amsterdam, The Netherlands), ACC from Sigma-Aldrich Chemie BV (Zwijndrecht, The Netherlands), and SA from Malinckrodt Baker BV (Deventer, The Netherlands).
Challenge Inoculation and Disease Assessment
Challenge inoculations were performed by dipping the leaves of 5-week-old plants in a bacterial suspension of the virulent pathogen P. s. tomato at 2.5 × 107 cfu/mL in 10 mM MgSO4, 0.01% (v/v) Silwet L-77. Four days after challenge, disease severity was assessed by determining the percentage of leaves with symptoms per plant (20 plants per treatment) and by examining the growth of the challenging pathogen in leaves. Leaves were scored as diseased when showing necrotic or water-soaked lesions surrounded by chlorosis. The number of P. s. tomato bacteria in inoculated leaves was assessed in three sets of 20 randomly selected leaves per treatment. Leaves were weighed, rinsed thoroughly in sterile water, and homogenized in 10 mM MgSO4. Subsequently, appropriate dilutions were plated onto King's medium B agar supplemented with 50 mg/L rifampicin and 100 mg/L cycloheximide. After an incubation time of 48 hr at 28°C, the number of rifampicin-resistant colony-forming units per gram of infected leaf tissue was determined.
Rhizosphere Colonization
Colonization of the rhizosphere of wild-type, transgenic, and mutant plants by rifampicin-resistant P. fluorescens WCS417r bacteria was examined at the end of each bioassay. In duplicate, roots of six plants per treatment were harvested, weighed, and shaken vigorously for 1 min in 5 mL of 10 mM MgSO4 containing 0.5 g of glass beads (0.17 mm diameter). Appropriate dilutions were plated onto King's medium B agar supplemented with cycloheximide (100 mg/L), ampicillin (50 mg/L), chloramphenicol (13 mg/L), and rifampicin (150 mg/L), which is selective for rifampicin-resistant, fluorescent Pseudomonas spp (Geels and Schippers, 1983). After overnight incubation at 28°C, the number of rifampicin-resistant colony-forming units per gram of root fresh weight was determined.
Competitive Reverse Transcriptase–Polymerase Chain Reaction
Analysis of PR-1 gene expression was performed using the competitive reverse transcriptase–polymerase chain reaction (RT-PCR) as described by Siebert and Larrick (1992). A PR-1–specific primer pair (5′-GTAGGTGCTCTTGTTCTTCC-3′ and 5′-TTCACATAATTCCCACGAGG-3′), yielding RT-PCR products of 422 bp, was prepared based on the Arabidopsis PR-1 cDNA sequence described by Uknes et al. (1992). A 900-bp heterologous competitor DNA fragment, competing for the same set of primers, was obtained as described by Siebert and Larrick (1992). Fifty nanograms of poly(A)+ RNA, isolated from frozen leaves, was converted into first-strand cDNA. Subsequently, equal portions of cDNA were amplified in the presence of 500 pg of competitive DNA by using the PR-1–specific primer pair. The products were then resolved on an agarose gel stained with ethidium bromide.
Ethylene Measurement
Thirty minutes after the application of the chemicals, leaves were detached, weighed, and placed in 25-mL gas-tight serum flasks that subsequently were incubated for 24 hr under climate chamber conditions. Ethylene accumulation was measured by gas chromatography as described by de Laat and van Loon (1982).
RNA Gel Blot Analysis
Total RNA was extracted from roots and leaves of 5-week-old control and ISR-expressing plants and from leaves collected 2 days after chemical application, using the guanidine–hydrochloride RNA extraction method as described by Logemann et al. (1987). For RNA gel blot analysis, 15 μg of total RNA was electrophoretically separated on denaturing formaldehyde–agarose gels and blotted onto Hybond-N+ membranes (Amersham, 's-Hertogenbosch, The Netherlands) by capillary transfer, as described by Sambrook et al. (1989). RNA gel blots were hybridized and washed as described previously (Pieterse et al., 1994) and exposed to a Kodak X-OMAT AR film. DNA probes were labeled with α-32P-dCTP by random primer labeling (Feinberg and Vogelstein, 1983). Probes for the detection of Atvsp and Hel transcripts were prepared by PCR with primers based on sequences obtained from GenBank accession numbers Z18377 and U01880, respectively. Probes for Pdf1.2 and PR-1 were derived from an Arabidopsis Pdf1.2 and a PR-1 cDNA clone, respectively (Uknes et al., 1992; Penninckx et al., 1996).
We thank the Nottingham Arabidopsis Stock Centre and Drs. John Ryals, Paul Staswick, and Xinnian Dong for plant seeds; Dr. Brian Staskawicz for P. s. tomato strains; Drs. John Ryals and Willem Broekaert for the PR-1 and the Pdf1.2 cDNA clone, respectively; and Dr. Peter Bakker and Jurriaan Ton for critically reading the manuscript. This research was supported in part by grants No. 805-45.002 (to S.C.M.V.W), No. 805-22.852 (to M.K.), and No. 805-45.007 (to H.G.) from the Life Science Foundation (SLW), which is subsidized by the Netherlands Organization of Scientific Research (NWO).
Received June 10, 1998.
Accepted July 17, 1998.
Published September 1, 1998.
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The Plant Cell Sep 1998, 10 (9) 1571-1580; DOI: 10.1105/tpc.10.9.1571
Chloroplast Chaperonin-Mediated Targeting of a Thylakoid Membrane Protein
Ectopic Expression of the Transcriptional Regulator silky3 Causes Pleiotropic Meristem and Sex Determination Defects in Maize Inflorescences
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text:
Family expresses support for medical marijuana bills
Updated: 10:15 AM CST Jan 30, 2015
Cannabidiol oil could be the biggest force behind the Cannabis Compassion and Care Act recently introduced in the Nebraska Legislature. It's one of two bills aimed at legalizing medical marijuana in the state.Families of children with severe epilepsy want the drug to treat seizures, which often prevent mental development in children.Video: Family expresses support for medical marijuana billsSen. Sue Crawford's bill exclusively legalizes the oil. The other bill, introduced by Sen. Tommy Garrett, legalizes the entire plant. Shari Lawlor supports both proposals, because she supports her daughter."I just want a better life for her," Lawlor said.Shari Lawlor's daughter, Brooke Lawlor, 22, had her first seizure when she was 15 months old. She still suffers from three seizures each day."She functions more like a third-grade level," Shari Lawlor said.A few years ago in Colorado, parents of children with seizures started using a marijuana extract called cannabidiol oil as a treatment. It can dramatically reduce seizures in patients with epilepsy and now parents in Nebraska want access to the same drug."This should be a doctor-patient relationship," Lawlor said. "It's immoral for a politician to be in the way of this decision."Brooke doesn't know much about the treatment, but she knows it would mean less pills."I just want to take the oil twice a day and the pill once a day," Brooke Lawlor said.The prescription cocktail she currently takes costs $17,000 for a five-month supply.While opponents of medical marijuana fear it is a gateway to recreational legalization, Shari and Brooke Lawlor believe the risk is worth the reward."You cannot prohibit just because of that fear," Shari Lawlor said. "There will always be a small minority that will try to abuse it and resell it, but there is also this small minority that deserves a better life."Garrett's bill would allow patients who qualify to grow up to 12 plants and keep 6 ounces of usable pot at any time. Many state law enforcement agencies have already stepped up in opposition to the bill.
Cannabidiol oil could be the biggest force behind the Cannabis Compassion and Care Act recently introduced in the Nebraska Legislature. It's one of two bills aimed at legalizing medical marijuana in the state.
Families of children with severe epilepsy want the drug to treat seizures, which often prevent mental development in children.
Video: Family expresses support for medical marijuana bills
Sen. Sue Crawford's bill exclusively legalizes the oil. The other bill, introduced by Sen. Tommy Garrett, legalizes the entire plant. Shari Lawlor supports both proposals, because she supports her daughter.
"I just want a better life for her," Lawlor said.
Shari Lawlor's daughter, Brooke Lawlor, 22, had her first seizure when she was 15 months old. She still suffers from three seizures each day.
"She functions more like a third-grade level," Shari Lawlor said.
A few years ago in Colorado, parents of children with seizures started using a marijuana extract called cannabidiol oil as a treatment. It can dramatically reduce seizures in patients with epilepsy and now parents in Nebraska want access to the same drug.
"This should be a doctor-patient relationship," Lawlor said. "It's immoral for a politician to be in the way of this decision."
Brooke doesn't know much about the treatment, but she knows it would mean less pills.
"I just want to take the oil twice a day and the pill once a day," Brooke Lawlor said.
The prescription cocktail she currently takes costs $17,000 for a five-month supply.
While opponents of medical marijuana fear it is a gateway to recreational legalization, Shari and Brooke Lawlor believe the risk is worth the reward.
"You cannot prohibit just because of that fear," Shari Lawlor said. "There will always be a small minority that will try to abuse it and resell it, but there is also this small minority that deserves a better life."
Garrett's bill would allow patients who qualify to grow up to 12 plants and keep 6 ounces of usable pot at any time. Many state law enforcement agencies have already stepped up in opposition to the bill.

redpajama_set_name: RedPajamaCommonCrawl


I've been doing more DIY Christmas gifts this year, but the problem with that is – you have to plan ahead. Usually. Not in this case! I guarantee these easy DIY bath salts and sugar scrubs can be done in 5 minutes or less.
I used the himalayan sea salt mostly to make the jar look prettier – layered with the white epsom salts you can create a very pretty effect! If you're using something that's about the size of a spice jar, you only need about 2-3 drops of essential oil. Fill your jar halfway, put in a drop, fill it up the rest of the way, and put another drop. Tie a ribbon and tag on it and you're done!
So – isn't that super easy, like I promised?? I'm putting one of each of these in my gifts this year – such a great little addition, and extremely frugal too!
What's your favourite super easy DIY gift?


Monday, October 6th is World Habitat Day – an event created by the United Nations to draw international attention to the importance of the built environment in achieving development goals and to raise awareness of healthy shelters as a basic human right. This year's theme, Voices from Slums, will draw global attention to the conditions in informal housing settlements around the world, facilitate the development and implementation of processes to alleviate the numerous problems faced by residents, and call upon both local and international policy-makers and leaders to address the manifold problems associated with slums in a substantive manner.
The sad reality is that the poorest and most vulnerable among us face the harshest and deadliest of living conditions. With rapid urbanization, dense and dangerous slums are a common feature in many cities around the world. High rates of disease and premature deaths are often hallmarks of these substandard living environments. Diseases of poverty, such as tuberculosis, malaria, and diarrheal illnesses, are rapidly transmitted and have devastating effects on the families and communities.
As an organization working at the intersection of architecture and public health, we at ARCHIVE Global address many of the issues highlighted by this annual event. We believe that healthy homes are vital to health and well-being. We work in some of the world's most vulnerable environments to develop and deliver architectural interventions within impoverished communities. In Haiti, we are working on improving ventilation in a community suffering from the dual burden of TB and HIV/AIDs. In Cameroon, we are implementing interventions to reduce malaria rates in urban homes. In Camden, New Jersey, we are tackling the common indoor triggers of respiratory illnesses to combat crippling rates of asthma among children living in poverty. Our goal is two-fold. We implement cost-effective solutions that can be easily replicated and scaled up by the larger community, while also directly training community members on the most critical health issues and building practices to create a sustainable future for these communities.
Sign our petition urging world leaders to prioritize housing as an essential pillar of public health and, more broadly, development.
A powerful way you can support our work and World Habitat Day is by signing our online petition urging world leaders to prioritize housing as an essential pillar of public health and, more broadly, development.
We are excited about High Fives, our new project in Savar, Bangladesh, where we are working with residents of a marginalized community to replace disease-spreading dirt floors with cleaner concrete floors. Over 750,000 children die each year as a direct result of diarrheal sickness. We want to drastically cut down that number. The fact is that this heavy morbidity and mortality is preventable. Dirt is literally a breeding ground for parasites and bacteria. High Fives is based on the public health principle that children who survive past their 5th birthday are more likely to live into adulthood.
High Fives will reduce rates of diarrheal diseases among children in one of the poorest communities in Bangladesh. Working with our local partners in Dhaka and with a team of dedicated and talented architects from various universities and firms, we have developed a cost-effective and scalable flooring project. We are replacing dirt floors with strong, cleanable concrete floors and empowering the local community with the financial resources and training needed to replicate this model.
This project is unique in that we're using a crowd-funding model that allows and relies on individuals, organizations (such as schools, student groups, and clubs), and businesses to create their own campaigns to fund the floors for individual families. We hope that this project will allow donors and supporters to take on a more active and rewarding role as part of a high impact development project. We strongly believe that, working together, our supporters can deliver simple, powerful, and lifesaving housing solutions for families and communities around the world.


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text:
Crossover mixer
Quad Cortex Feature Requests
quad-cortex
greim December 8, 2021, 7:12am #1
This would be a "mode" or "variant", like the splitter crossover variant, but on the mixer. That is, at the mix point, it would discard everything above frequency X on channel A, and discard everything below on channel B, then mix what remains to produce the full-range signal.
For example say I like the high-end of amp A, but the low end of amp B. This would give me the best of both worlds, and would open up a lot of tone-shaping options.
It can't be done with a crossover splitter, since effects applied after the split tend to "escape" the crossover bands. That is, a distortion pedal—even though the incoming signal only contains 800Hz and below—will add coloration above 800Hz to the outgoing signal. The frequency-selection needs to happen after all effects are applied, i.e. at the mixer.
Firerock December 11, 2021, 12:45am #2
You could try using the current crossover option and just add high and low pass filters at the end of each fork of the split.


What to do in Europe in October?
Engel & Völkers Licence Partner Cerdanya / Blog / What to do in Europe in October?
After a long summer relaxing on the beach and recharging our batteries, it's time to get out there and experience some new things. And there's no better place to find them than Europe in October. With the leaves changing to a riot of colour and the evenings drawing in, cities across the continent are in a magical period of transformation.
If you're looking for an autumn getaway, here's our guide to the best of Europe in October.
Autumn in Europe would be far less raucous and fun without the German harvest festivals. Oktoberfest Munich is perhaps the most famous example – as people gather from around the world to enjoy beer and good Bavarian food between 22 September and 7 October – but there are lots more to enjoy.
La mercè Barcelona began as a festival honouring the patron saint of Barcelona, but has steadily grown into Europe's biggest street party. It also gets started early, running between 21 and 24 September.
Today's version still contains some traditional folk elements, but also not incorporates music, fireworks and performance art. It's even expanded beyond the boundaries of Barcelona, with this year's sister event taking place in Lisbon.
Unlike Munich during Oktoberfest or Barcelona during La mercè, Paris in October is pure art and culture, mostly thanks to the growing reputation of Nuit Blanche. This translates as 'sleepless night', because 6 October is all about a night of wakeful contemplation in which you'll see the city afresh. As you wander the streets, you'll be treated to concerts, installations and experiences planned by avant-garde artists – so you're guaranteed to find something new for the senses.
If you arrive later in the month, you can also enjoy contemporary art week, a series of events that includes the FIAC (International Contemporary Art Fair). This year you'll also find a huge Cubism exhibition at the Pompidou Centre beginning on 17 October.
While Paris might carry an international cachet that few can match, Budapest boasts its own programme of arts and culture – but without the throngs of tourists. And this year, the city has managed to attract a range of artists that stand shoulder to shoulder with its westerly rival.
The CAFe Budapest contemporary arts festival runs from 5 to 21 October this year, and it brings the already-vibrant city to life with international artworks and fresh, local treasures. There's also a large art market, so you can take some home with you too. You never know; it might just be the first holiday from which you make a profit.
Even though the days are getting colder and the nights longer, there's no doubt that Europe in October is still bursting with colour and culture. Whether you take a short break or a longer trip, a visit to one of the continent's great cities at this time of year is sure to be richly rewarded with autumnal cheer.


Many people are aware that alcohol causes more harm than many other drugs available in our society.
harms to others (e.g. crime, injury and social costs).
Among New Zealanders aged 15-49 years (% of the total population), alcohol causes more detah and disability than smoking, poor nutrition, or other unhealthy behaviours measured.


Tawney, R. H.: The Attack: And Other Papers.
Oliver, Robert T.: Verdict in Korea. / Jones, F. C.
Griffis, Stanton: Lying in State. / Minshall, T. H.
Hatch, John: The Dilemma of South Africa. / Davis, S. R.
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