This article addresses the fading mechanisms observed in carbon-coated and disproportionated Si/SiO x /C negative electrode for Li-ion secondary batteries. A combined characterization revealed that Si/SiO x consisted of multiple nano-sized domains of amorphous Si and SiO x , with some crystalline Si. The initial discharge capacity of Si/SiO x /C was 1380mAhg−1, however, it decreased to 578mAhg−1 at the 90th cycle. The electrode exhibited two different fading modes: local fading and global fading. Through intensive TEM analysis, it was concluded that both fading modes were closely related to the structural change in Si/SiO x /C during alloying/de-alloying. Local fading was induced by the contact loss between active material and conducting carbon, and the limited buffering effect of lithium silicates. Global fading was attributed to the crumbling of Si/SiO x , which limited further alloying, leading to ever decreasing discharge capacity. Both fading modes were thoroughly investigated and monitored by qualitative and quantitative STEM-EDX analysis.