Merge branch 'main' of https://huggingface.co/datasets/barma7/oai-t2maps-epgfit
Browse files
README.md
CHANGED
@@ -1,5 +1,14 @@
|
|
1 |
---
|
2 |
license: mit
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
3 |
---
|
4 |
# Osteoarthritis Initiative (OAI) T2 Maps – EPG Fit Dataset
|
5 |
|
@@ -20,7 +29,7 @@ The dataset is organized by acquisition timepoints. Each main folder represents
|
|
20 |
- **Subject folders**: Each folder name is the unique OAI subject ID (e.g., `9000099`).
|
21 |
|
22 |
Within each subject folder:
|
23 |
-
- **`t2.nii.gz`**: The T2 map computed using the EPG dictionary fitting method, specific to cartilage
|
24 |
- **`r2.nii.gz`**: The r-squared value of the fit (goodness of fit).
|
25 |
|
26 |
### MESE Data Location Files
|
@@ -33,7 +42,7 @@ For each acquisition timepoint (e.g., `00_month_mese_locations.csv`, `12_month_m
|
|
33 |
- **dicom_mese_path**: The relative path to the original DICOM MESE data within the OAI dataset.
|
34 |
- **t2map_nifti_path**: The relative path to the computed T2 map for that subject, located in this dataset.
|
35 |
|
36 |
-
These CSV files help
|
37 |
|
38 |
### Features
|
39 |
|
@@ -103,7 +112,3 @@ This dataset was created based on the Osteoarthritis Initiative (OAI) dataset. T
|
|
103 |
If you use this dataset in your research, please cite:
|
104 |
|
105 |
Barbieri, M., Gatti, A.A. and Kogan, F. (2024), Improving Accuracy and Reproducibility of Cartilage T2 Mapping in the OAI Dataset Through Extended Phase Graph Modeling. J Magn Reson Imaging. https://doi.org/10.1002/jmri.29646
|
106 |
-
|
107 |
-
---
|
108 |
-
|
109 |
-
This README now covers all necessary information in a structured, accessible way. Let me know if you’d like further adjustments!
|
|
|
1 |
---
|
2 |
license: mit
|
3 |
+
language:
|
4 |
+
- en
|
5 |
+
tags:
|
6 |
+
- medical
|
7 |
+
- biology
|
8 |
+
- cartilage
|
9 |
+
- t2mapping
|
10 |
+
- OAI
|
11 |
+
pretty_name: OAI T2 maps with EPG fitting
|
12 |
---
|
13 |
# Osteoarthritis Initiative (OAI) T2 Maps – EPG Fit Dataset
|
14 |
|
|
|
29 |
- **Subject folders**: Each folder name is the unique OAI subject ID (e.g., `9000099`).
|
30 |
|
31 |
Within each subject folder:
|
32 |
+
- **`t2.nii.gz`**: The T2 map computed using the EPG dictionary fitting method, specific to cartilage tissue.
|
33 |
- **`r2.nii.gz`**: The r-squared value of the fit (goodness of fit).
|
34 |
|
35 |
### MESE Data Location Files
|
|
|
42 |
- **dicom_mese_path**: The relative path to the original DICOM MESE data within the OAI dataset.
|
43 |
- **t2map_nifti_path**: The relative path to the computed T2 map for that subject, located in this dataset.
|
44 |
|
45 |
+
These CSV files will help locate the original MESE DICOM data within the OAI dataset.
|
46 |
|
47 |
### Features
|
48 |
|
|
|
112 |
If you use this dataset in your research, please cite:
|
113 |
|
114 |
Barbieri, M., Gatti, A.A. and Kogan, F. (2024), Improving Accuracy and Reproducibility of Cartilage T2 Mapping in the OAI Dataset Through Extended Phase Graph Modeling. J Magn Reson Imaging. https://doi.org/10.1002/jmri.29646
|
|
|
|
|
|
|
|