Ouput of DomainCharts. A) Visualization chart showing the
distribution of 402 genes among protein domains. The parameters
were set to a minimum hit threshold of 4 and output was sorted
by hit count. Similar to the output of GoCharts and KeggCharts,
blue bars represent the number of genes containing that
particular domain. Selecting a blue bar opens an HTML table
showing the LocusLink, Gene Name, Current Classification, and
Other Classification data for the genes in that pathway (data
not shown). B) Selecting the domain name 'IL8' in Figure 6A that
contains 6 differentially expressed genes brings the user to a
new page containing the output from the Conserved Domain
Database (CDD) of NCBI, which provides detailed information
about the IL8 domain including structural information, multiple
sequence alignments, and descriptive information about the
domain and the proteins that possess it. Dennis et al. Genome
Biology 2003 4:P3 doi:10.1186/gb-2003-4-5-p3