test_class.declarator: trueSymmetricMatrix
test_class.modifier: private static
test_class.original_string: private static SymmetricMatrix trueSymmetricMatrix;
test_class.type: SymmetricMatrix
test_class.var_name: trueSymmetricMatrix
test_class.declarator: testSymmetricMatrix
test_class.modifier: private static
test_class.original_string: private static Matrix testSymmetricMatrix;
test_class.type: Matrix
test_class.var_name: testSymmetricMatrix
test_class.file: singa-mathematics/src/test/java/bio/singa/mathematics/matrices/SymmetricMatrixTest.java
test_class.identifier: SymmetricMatrixTest
test_case.body: @Test
      void shouldCopy() {
          SymmetricMatrix copy1 = trueSymmetricMatrix.getCopy();
          SquareMatrix copy2 = trueSymmetricMatrix.getCopy();
          copy1.getElements()[0][0] = Double.MIN_VALUE;
          assertTrue(SymmetricMatrix.isCompact(copy2.getElements()));
          assertTrue(copy2.getElements()[0][0] != Double.MIN_VALUE);
      }
test_case.class_method_signature: SymmetricMatrixTest.shouldCopy()
test_case.full_signature: @Test void shouldCopy()
test_case.identifier: shouldCopy
test_case.invocations: getCopy getCopy getElements assertTrue isCompact getElements assertTrue getElements
test_case.modifiers: @Test
test_case.parameters: ()
test_case.return: void
test_case.signature: void shouldCopy()
focal_class.declarator: serialVersionUID = -6578419947334743873L
focal_class.modifier: private static final
focal_class.original_string: private static final long serialVersionUID = -6578419947334743873L;
focal_class.type: long
focal_class.var_name: serialVersionUID
focal_class.file: singa-mathematics/src/main/java/bio/singa/mathematics/matrices/SymmetricMatrix.java
focal_class.identifier: SymmetricMatrix
focal_class.class_method_signature: SymmetricMatrix.SymmetricMatrix(double[][] values)
focal_class.full_signature: public  SymmetricMatrix(double[][] values)
focal_class.identifier: SymmetricMatrix
focal_class.modifiers: public
focal_class.parameters: (double[][] values)
focal_class.signature:  SymmetricMatrix(double[][] values)
focal_class.class_method_signature: SymmetricMatrix.SymmetricMatrix(double[][] values, int rowDimension, int columnDimension)
focal_class.full_signature:   SymmetricMatrix(double[][] values, int rowDimension, int columnDimension)
focal_class.identifier: SymmetricMatrix
focal_class.parameters: (double[][] values, int rowDimension, int columnDimension)
focal_class.signature:  SymmetricMatrix(double[][] values, int rowDimension, int columnDimension)
focal_class.class_method_signature: SymmetricMatrix.isSymmetric(double[][] potentialValues)
focal_class.full_signature: public static boolean isSymmetric(double[][] potentialValues)
focal_class.identifier: isSymmetric
focal_class.modifiers: public static
focal_class.parameters: (double[][] potentialValues)
focal_class.return: boolean
focal_class.signature: boolean isSymmetric(double[][] potentialValues)
focal_class.class_method_signature: SymmetricMatrix.isSymmetric(Matrix matrix)
focal_class.full_signature: public static boolean isSymmetric(Matrix matrix)
focal_class.identifier: isSymmetric
focal_class.modifiers: public static
focal_class.parameters: (Matrix matrix)
focal_class.return: boolean
focal_class.signature: boolean isSymmetric(Matrix matrix)
focal_class.class_method_signature: SymmetricMatrix.assertThatValuesAreSymmetric(double[][] potentialValues)
focal_class.full_signature: public static void assertThatValuesAreSymmetric(double[][] potentialValues)
focal_class.identifier: assertThatValuesAreSymmetric
focal_class.modifiers: public static
focal_class.parameters: (double[][] potentialValues)
focal_class.return: void
focal_class.signature: void assertThatValuesAreSymmetric(double[][] potentialValues)
focal_class.class_method_signature: SymmetricMatrix.isCompact(double[][] potentialValues)
focal_class.full_signature: public static boolean isCompact(double[][] potentialValues)
focal_class.identifier: isCompact
focal_class.modifiers: public static
focal_class.parameters: (double[][] potentialValues)
focal_class.return: boolean
focal_class.signature: boolean isCompact(double[][] potentialValues)
focal_class.class_method_signature: SymmetricMatrix.compactToSymmetricMatrix(double[][] potentialValues)
focal_class.full_signature: public static double[][] compactToSymmetricMatrix(double[][] potentialValues)
focal_class.identifier: compactToSymmetricMatrix
focal_class.modifiers: public static
focal_class.parameters: (double[][] potentialValues)
focal_class.return: double[][]
focal_class.signature: double[][] compactToSymmetricMatrix(double[][] potentialValues)
focal_class.class_method_signature: SymmetricMatrix.getColumn(int columnIndex)
focal_class.full_signature: @Override public RegularVector getColumn(int columnIndex)
focal_class.identifier: getColumn
focal_class.modifiers: @Override public
focal_class.parameters: (int columnIndex)
focal_class.return: RegularVector
focal_class.signature: RegularVector getColumn(int columnIndex)
focal_class.class_method_signature: SymmetricMatrix.getRow(int rowIndex)
focal_class.full_signature: @Override public RegularVector getRow(int rowIndex)
focal_class.identifier: getRow
focal_class.modifiers: @Override public
focal_class.parameters: (int rowIndex)
focal_class.return: RegularVector
focal_class.signature: RegularVector getRow(int rowIndex)
focal_class.class_method_signature: SymmetricMatrix.getElement(int rowIndex, int columnIndex)
focal_class.full_signature: @Override public double getElement(int rowIndex, int columnIndex)
focal_class.identifier: getElement
focal_class.modifiers: @Override public
focal_class.parameters: (int rowIndex, int columnIndex)
focal_class.return: double
focal_class.signature: double getElement(int rowIndex, int columnIndex)
focal_class.class_method_signature: SymmetricMatrix.getCompleteElements()
focal_class.full_signature: public double[][] getCompleteElements()
focal_class.identifier: getCompleteElements
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.return: double[][]
focal_class.signature: double[][] getCompleteElements()
focal_class.class_method_signature: SymmetricMatrix.transpose()
focal_class.full_signature: @Override public Matrix transpose()
focal_class.identifier: transpose
focal_class.modifiers: @Override public
focal_class.parameters: ()
focal_class.return: Matrix
focal_class.signature: Matrix transpose()
focal_class.superclass: extends SquareMatrix
focal_method.body: public static boolean isCompact(double[][] potentialValues) {
          int rowLength = 1;
          for (double[] potentialValue : potentialValues) {
              if (potentialValue.length != rowLength) {
                  return false;
              }
              rowLength++;
          }
          return true;
      }
focal_method.class_method_signature: SymmetricMatrix.isCompact(double[][] potentialValues)
focal_method.full_signature: public static boolean isCompact(double[][] potentialValues)
focal_method.identifier: isCompact
focal_method.modifiers: public static
focal_method.parameters: (double[][] potentialValues)
focal_method.return: boolean
focal_method.signature: boolean isCompact(double[][] potentialValues)