test_class.file: descriptor/fingerprint/src/test/java/org/openscience/cdk/fingerprint/ExtendedFingerprinterTest.java
test_class.identifier: ExtendedFingerprinterTest
test_class.superclass: extends AbstractFixedLengthFingerprinterTest
test_case.body: @Test
      public void testChebi() throws Exception {
          IAtomContainer searchmol = null;
          IAtomContainer findmol = null;
          String filename = "data/mdl/chebisearch.mol";
          InputStream ins = this.getClass().getClassLoader().getResourceAsStream(filename);
          MDLV2000Reader reader = new MDLV2000Reader(ins);
          searchmol = reader.read(new AtomContainer());
          reader.close();
          filename = "data/mdl/chebifind.mol";
          ins = this.getClass().getClassLoader().getResourceAsStream(filename);
          reader = new MDLV2000Reader(ins);
          findmol = reader.read(new AtomContainer());
          reader.close();
          IFingerprinter fingerprinter = new ExtendedFingerprinter();
          BitSet superBS = fingerprinter.getBitFingerprint(findmol).asBitSet();
          BitSet subBS = fingerprinter.getBitFingerprint(searchmol).asBitSet();
          boolean isSubset = FingerprinterTool.isSubset(superBS, subBS);
          boolean isSubset2 = FingerprinterTool.isSubset(subBS, superBS);
          Assert.assertFalse(isSubset);
          Assert.assertFalse(isSubset2);
      }
test_case.class_method_signature: ExtendedFingerprinterTest.testChebi()
test_case.full_signature: @Test public void testChebi()
test_case.identifier: testChebi
test_case.invocations: getResourceAsStream getClassLoader getClass read close getResourceAsStream getClassLoader getClass read close asBitSet getBitFingerprint asBitSet getBitFingerprint isSubset isSubset assertFalse assertFalse
test_case.modifiers: @Test public
test_case.parameters: ()
test_case.return: void
test_case.signature: void testChebi()
focal_class.declarator: RESERVED_BITS = 25
focal_class.modifier: private final
focal_class.original_string: private final int     RESERVED_BITS = 25;
focal_class.type: int
focal_class.var_name: RESERVED_BITS
focal_class.declarator: fingerprinter = null
focal_class.modifier: private
focal_class.original_string: private Fingerprinter fingerprinter = null;
focal_class.type: Fingerprinter
focal_class.var_name: fingerprinter
focal_class.file: descriptor/fingerprint/src/main/java/org/openscience/cdk/fingerprint/ExtendedFingerprinter.java
focal_class.identifier: ExtendedFingerprinter
focal_class.interfaces: implements IFingerprinter
focal_class.class_method_signature: ExtendedFingerprinter.ExtendedFingerprinter()
focal_class.full_signature: public  ExtendedFingerprinter()
focal_class.identifier: ExtendedFingerprinter
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.signature:  ExtendedFingerprinter()
focal_class.class_method_signature: ExtendedFingerprinter.ExtendedFingerprinter(int size)
focal_class.full_signature: public  ExtendedFingerprinter(int size)
focal_class.identifier: ExtendedFingerprinter
focal_class.modifiers: public
focal_class.parameters: (int size)
focal_class.signature:  ExtendedFingerprinter(int size)
focal_class.class_method_signature: ExtendedFingerprinter.ExtendedFingerprinter(int size, int searchDepth)
focal_class.full_signature: public  ExtendedFingerprinter(int size, int searchDepth)
focal_class.identifier: ExtendedFingerprinter
focal_class.modifiers: public
focal_class.parameters: (int size, int searchDepth)
focal_class.signature:  ExtendedFingerprinter(int size, int searchDepth)
focal_class.class_method_signature: ExtendedFingerprinter.getBitFingerprint(IAtomContainer container)
focal_class.full_signature: @Override public IBitFingerprint getBitFingerprint(IAtomContainer container)
focal_class.identifier: getBitFingerprint
focal_class.modifiers: @Override public
focal_class.parameters: (IAtomContainer container)
focal_class.return: IBitFingerprint
focal_class.signature: IBitFingerprint getBitFingerprint(IAtomContainer container)
focal_class.class_method_signature: ExtendedFingerprinter.getRawFingerprint(IAtomContainer iAtomContainer)
focal_class.full_signature: @Override public Map<String, Integer> getRawFingerprint(IAtomContainer iAtomContainer)
focal_class.identifier: getRawFingerprint
focal_class.modifiers: @Override public
focal_class.parameters: (IAtomContainer iAtomContainer)
focal_class.return: Map<String, Integer>
focal_class.signature: Map<String, Integer> getRawFingerprint(IAtomContainer iAtomContainer)
focal_class.class_method_signature: ExtendedFingerprinter.getBitFingerprint(IAtomContainer atomContainer, IRingSet ringSet, List<IRingSet> rslist)
focal_class.full_signature: public IBitFingerprint getBitFingerprint(IAtomContainer atomContainer, IRingSet ringSet, List<IRingSet> rslist)
focal_class.identifier: getBitFingerprint
focal_class.modifiers: public
focal_class.parameters: (IAtomContainer atomContainer, IRingSet ringSet, List<IRingSet> rslist)
focal_class.return: IBitFingerprint
focal_class.signature: IBitFingerprint getBitFingerprint(IAtomContainer atomContainer, IRingSet ringSet, List<IRingSet> rslist)
focal_class.class_method_signature: ExtendedFingerprinter.getSize()
focal_class.full_signature: @Override public int getSize()
focal_class.identifier: getSize
focal_class.modifiers: @Override public
focal_class.parameters: ()
focal_class.return: int
focal_class.signature: int getSize()
focal_class.class_method_signature: ExtendedFingerprinter.getCountFingerprint(IAtomContainer container)
focal_class.full_signature: @Override public ICountFingerprint getCountFingerprint(IAtomContainer container)
focal_class.identifier: getCountFingerprint
focal_class.modifiers: @Override public
focal_class.parameters: (IAtomContainer container)
focal_class.return: ICountFingerprint
focal_class.signature: ICountFingerprint getCountFingerprint(IAtomContainer container)
focal_class.superclass: extends Fingerprinter
focal_method.body: @Override
      public IBitFingerprint getBitFingerprint(IAtomContainer container) throws CDKException {
          return this.getBitFingerprint(container, null, null);
      }
focal_method.class_method_signature: ExtendedFingerprinter.getBitFingerprint(IAtomContainer container)
focal_method.full_signature: @Override public IBitFingerprint getBitFingerprint(IAtomContainer container)
focal_method.identifier: getBitFingerprint
focal_method.invocations: getBitFingerprint
focal_method.modifiers: @Override public
focal_method.parameters: (IAtomContainer container)
focal_method.return: IBitFingerprint
focal_method.signature: IBitFingerprint getBitFingerprint(IAtomContainer container)