test_class.file: storage/smiles/src/test/java/org/openscience/cdk/smiles/CDKToBeamTest.java
test_class.identifier: CDKToBeamTest
test_case.body: @Test(expected = NullPointerException.class)
      public void noSymbol() throws Exception {
          new CDKToBeam().toBeamAtom(new Atom());
      }
test_case.class_method_signature: CDKToBeamTest.noSymbol()
test_case.full_signature: @Test(expected = NullPointerException.class) public void noSymbol()
test_case.identifier: noSymbol
test_case.invocations: toBeamAtom
test_case.modifiers: @Test(expected = NullPointerException.class) public
test_case.parameters: ()
test_case.return: void
test_case.signature: void noSymbol()
focal_class.declarator: flavour
focal_class.modifier: private final
focal_class.original_string: private final int flavour;
focal_class.type: int
focal_class.var_name: flavour
focal_class.file: storage/smiles/src/main/java/org/openscience/cdk/smiles/CDKToBeam.java
focal_class.identifier: CDKToBeam
focal_class.class_method_signature: CDKToBeam.CDKToBeam()
focal_class.full_signature:   CDKToBeam()
focal_class.identifier: CDKToBeam
focal_class.parameters: ()
focal_class.signature:  CDKToBeam()
focal_class.class_method_signature: CDKToBeam.CDKToBeam(int flavour)
focal_class.full_signature:   CDKToBeam(int flavour)
focal_class.identifier: CDKToBeam
focal_class.parameters: (int flavour)
focal_class.signature:  CDKToBeam(int flavour)
focal_class.class_method_signature: CDKToBeam.toBeamGraph(IAtomContainer ac)
focal_class.full_signature:  Graph toBeamGraph(IAtomContainer ac)
focal_class.identifier: toBeamGraph
focal_class.parameters: (IAtomContainer ac)
focal_class.return: Graph
focal_class.signature: Graph toBeamGraph(IAtomContainer ac)
focal_class.class_method_signature: CDKToBeam.toBeamAtom(IAtom atom)
focal_class.full_signature:  Atom toBeamAtom(IAtom atom)
focal_class.identifier: toBeamAtom
focal_class.parameters: (IAtom atom)
focal_class.return: Atom
focal_class.signature: Atom toBeamAtom(IAtom atom)
focal_class.class_method_signature: CDKToBeam.toBeamEdge(IBond b, Map<IAtom, Integer> indices)
focal_class.full_signature:  Edge toBeamEdge(IBond b, Map<IAtom, Integer> indices)
focal_class.identifier: toBeamEdge
focal_class.parameters: (IBond b, Map<IAtom, Integer> indices)
focal_class.return: Edge
focal_class.signature: Edge toBeamEdge(IBond b, Map<IAtom, Integer> indices)
focal_class.class_method_signature: CDKToBeam.toBeamGraph(IAtomContainer ac, int flavour)
focal_class.full_signature: static Graph toBeamGraph(IAtomContainer ac, int flavour)
focal_class.identifier: toBeamGraph
focal_class.modifiers: static
focal_class.parameters: (IAtomContainer ac, int flavour)
focal_class.return: Graph
focal_class.signature: Graph toBeamGraph(IAtomContainer ac, int flavour)
focal_class.class_method_signature: CDKToBeam.getMajorMassNumber(Element e)
focal_class.full_signature: private static Integer getMajorMassNumber(Element e)
focal_class.identifier: getMajorMassNumber
focal_class.modifiers: private static
focal_class.parameters: (Element e)
focal_class.return: Integer
focal_class.signature: Integer getMajorMassNumber(Element e)
focal_class.class_method_signature: CDKToBeam.toBeamAtom(final IAtom a, final int flavour)
focal_class.full_signature: static Atom toBeamAtom(final IAtom a, final int flavour)
focal_class.identifier: toBeamAtom
focal_class.modifiers: static
focal_class.parameters: (final IAtom a, final int flavour)
focal_class.return: Atom
focal_class.signature: Atom toBeamAtom(final IAtom a, final int flavour)
focal_class.class_method_signature: CDKToBeam.toBeamEdge(IBond b, int flavour, Map<IAtom, Integer> indices)
focal_class.full_signature: static Edge toBeamEdge(IBond b, int flavour, Map<IAtom, Integer> indices)
focal_class.identifier: toBeamEdge
focal_class.modifiers: static
focal_class.parameters: (IBond b, int flavour, Map<IAtom, Integer> indices)
focal_class.return: Edge
focal_class.signature: Edge toBeamEdge(IBond b, int flavour, Map<IAtom, Integer> indices)
focal_class.class_method_signature: CDKToBeam.toBeamEdgeLabel(IBond b, int flavour)
focal_class.full_signature: private static Bond toBeamEdgeLabel(IBond b, int flavour)
focal_class.identifier: toBeamEdgeLabel
focal_class.modifiers: private static
focal_class.parameters: (IBond b, int flavour)
focal_class.return: Bond
focal_class.signature: Bond toBeamEdgeLabel(IBond b, int flavour)
focal_class.class_method_signature: CDKToBeam.addGeometricConfiguration(IDoubleBondStereochemistry dbs, int flavour, GraphBuilder gb, Map<IAtom, Integer> indices)
focal_class.full_signature: private static void addGeometricConfiguration(IDoubleBondStereochemistry dbs, int flavour, GraphBuilder gb, Map<IAtom, Integer> indices)
focal_class.identifier: addGeometricConfiguration
focal_class.modifiers: private static
focal_class.parameters: (IDoubleBondStereochemistry dbs, int flavour, GraphBuilder gb, Map<IAtom, Integer> indices)
focal_class.return: void
focal_class.signature: void addGeometricConfiguration(IDoubleBondStereochemistry dbs, int flavour, GraphBuilder gb, Map<IAtom, Integer> indices)
focal_class.class_method_signature: CDKToBeam.addTetrahedralConfiguration(ITetrahedralChirality tc, GraphBuilder gb, Map<IAtom, Integer> indices)
focal_class.full_signature: private static void addTetrahedralConfiguration(ITetrahedralChirality tc, GraphBuilder gb, Map<IAtom, Integer> indices)
focal_class.identifier: addTetrahedralConfiguration
focal_class.modifiers: private static
focal_class.parameters: (ITetrahedralChirality tc, GraphBuilder gb, Map<IAtom, Integer> indices)
focal_class.return: void
focal_class.signature: void addTetrahedralConfiguration(ITetrahedralChirality tc, GraphBuilder gb, Map<IAtom, Integer> indices)
focal_class.class_method_signature: CDKToBeam.addExtendedTetrahedralConfiguration(ExtendedTetrahedral et, GraphBuilder gb,
              Map<IAtom, Integer> indices)
focal_class.full_signature: private static void addExtendedTetrahedralConfiguration(ExtendedTetrahedral et, GraphBuilder gb,
              Map<IAtom, Integer> indices)
focal_class.identifier: addExtendedTetrahedralConfiguration
focal_class.modifiers: private static
focal_class.parameters: (ExtendedTetrahedral et, GraphBuilder gb,
              Map<IAtom, Integer> indices)
focal_class.return: void
focal_class.signature: void addExtendedTetrahedralConfiguration(ExtendedTetrahedral et, GraphBuilder gb,
              Map<IAtom, Integer> indices)
focal_class.class_method_signature: CDKToBeam.addExtendedCisTransConfig(ExtendedCisTrans ect, GraphBuilder gb,
                                                    Map<IAtom, Integer> indices,
                                                    IAtomContainer container)
focal_class.full_signature: private static void addExtendedCisTransConfig(ExtendedCisTrans ect, GraphBuilder gb,
                                                    Map<IAtom, Integer> indices,
                                                    IAtomContainer container)
focal_class.identifier: addExtendedCisTransConfig
focal_class.modifiers: private static
focal_class.parameters: (ExtendedCisTrans ect, GraphBuilder gb,
                                                    Map<IAtom, Integer> indices,
                                                    IAtomContainer container)
focal_class.return: void
focal_class.signature: void addExtendedCisTransConfig(ExtendedCisTrans ect, GraphBuilder gb,
                                                    Map<IAtom, Integer> indices,
                                                    IAtomContainer container)
focal_method.body: Atom toBeamAtom(IAtom atom) throws CDKException {
          return toBeamAtom(atom, flavour);
      }
focal_method.class_method_signature: CDKToBeam.toBeamAtom(IAtom atom)
focal_method.full_signature:  Atom toBeamAtom(IAtom atom)
focal_method.identifier: toBeamAtom
focal_method.invocations: toBeamAtom
focal_method.parameters: (IAtom atom)
focal_method.return: Atom
focal_method.signature: Atom toBeamAtom(IAtom atom)