test_class.file: storage/inchi/src/test/java/org/openscience/cdk/inchi/InChIToStructureTest.java
test_class.identifier: InChIToStructureTest
test_class.superclass: extends CDKTestCase
test_case.body: @Test
      public void testGetMessage() throws CDKException {
          InChIToStructure parser = new InChIToStructure("InChI=1S/CH5/h1H4", DefaultChemObjectBuilder.getInstance());
          parser.getAtomContainer();
          String message = parser.getMessage();
          assertNotNull(message);
      }
test_case.class_method_signature: InChIToStructureTest.testGetMessage()
test_case.full_signature: @Test public void testGetMessage()
test_case.identifier: testGetMessage
test_case.invocations: getInstance getAtomContainer getMessage assertNotNull
test_case.modifiers: @Test public
test_case.parameters: ()
test_case.return: void
test_case.signature: void testGetMessage()
focal_class.declarator: input
focal_class.modifier: protected
focal_class.original_string: protected JniInchiInputInchi      input;
focal_class.type: JniInchiInputInchi
focal_class.var_name: input
focal_class.declarator: output
focal_class.modifier: protected
focal_class.original_string: protected JniInchiOutputStructure output;
focal_class.type: JniInchiOutputStructure
focal_class.var_name: output
focal_class.declarator: molecule
focal_class.modifier: protected
focal_class.original_string: protected IAtomContainer          molecule;
focal_class.type: IAtomContainer
focal_class.var_name: molecule
focal_class.declarator: ISOTOPIC_SHIFT_FLAG = 10000
focal_class.modifier: private static final
focal_class.original_string: private static final int          ISOTOPIC_SHIFT_FLAG = 10000;
focal_class.type: int
focal_class.var_name: ISOTOPIC_SHIFT_FLAG
focal_class.file: storage/inchi/src/main/java/org/openscience/cdk/inchi/InChIToStructure.java
focal_class.identifier: InChIToStructure
focal_class.class_method_signature: InChIToStructure.InChIToStructure(String inchi, IChemObjectBuilder builder)
focal_class.full_signature: protected  InChIToStructure(String inchi, IChemObjectBuilder builder)
focal_class.identifier: InChIToStructure
focal_class.modifiers: protected
focal_class.parameters: (String inchi, IChemObjectBuilder builder)
focal_class.signature:  InChIToStructure(String inchi, IChemObjectBuilder builder)
focal_class.class_method_signature: InChIToStructure.InChIToStructure(String inchi, IChemObjectBuilder builder, String options)
focal_class.full_signature: protected  InChIToStructure(String inchi, IChemObjectBuilder builder, String options)
focal_class.identifier: InChIToStructure
focal_class.modifiers: protected
focal_class.parameters: (String inchi, IChemObjectBuilder builder, String options)
focal_class.signature:  InChIToStructure(String inchi, IChemObjectBuilder builder, String options)
focal_class.class_method_signature: InChIToStructure.InChIToStructure(String inchi, IChemObjectBuilder builder, List<String> options)
focal_class.full_signature: protected  InChIToStructure(String inchi, IChemObjectBuilder builder, List<String> options)
focal_class.identifier: InChIToStructure
focal_class.modifiers: protected
focal_class.parameters: (String inchi, IChemObjectBuilder builder, List<String> options)
focal_class.signature:  InChIToStructure(String inchi, IChemObjectBuilder builder, List<String> options)
focal_class.class_method_signature: InChIToStructure.generateAtomContainerFromInchi(IChemObjectBuilder builder)
focal_class.full_signature: protected void generateAtomContainerFromInchi(IChemObjectBuilder builder)
focal_class.identifier: generateAtomContainerFromInchi
focal_class.modifiers: protected
focal_class.parameters: (IChemObjectBuilder builder)
focal_class.return: void
focal_class.signature: void generateAtomContainerFromInchi(IChemObjectBuilder builder)
focal_class.class_method_signature: InChIToStructure.findOtherSinglyBonded(IAtomContainer container, IAtom atom, IAtom exclude)
focal_class.full_signature: private static IAtom findOtherSinglyBonded(IAtomContainer container, IAtom atom, IAtom exclude)
focal_class.identifier: findOtherSinglyBonded
focal_class.modifiers: private static
focal_class.parameters: (IAtomContainer container, IAtom atom, IAtom exclude)
focal_class.return: IAtom
focal_class.signature: IAtom findOtherSinglyBonded(IAtomContainer container, IAtom atom, IAtom exclude)
focal_class.class_method_signature: InChIToStructure.getAtomContainer()
focal_class.full_signature: public IAtomContainer getAtomContainer()
focal_class.identifier: getAtomContainer
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.return: IAtomContainer
focal_class.signature: IAtomContainer getAtomContainer()
focal_class.class_method_signature: InChIToStructure.getReturnStatus()
focal_class.full_signature: public INCHI_RET getReturnStatus()
focal_class.identifier: getReturnStatus
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.return: INCHI_RET
focal_class.signature: INCHI_RET getReturnStatus()
focal_class.class_method_signature: InChIToStructure.getMessage()
focal_class.full_signature: public String getMessage()
focal_class.identifier: getMessage
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.return: String
focal_class.signature: String getMessage()
focal_class.class_method_signature: InChIToStructure.getLog()
focal_class.full_signature: public String getLog()
focal_class.identifier: getLog
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.return: String
focal_class.signature: String getLog()
focal_class.class_method_signature: InChIToStructure.getWarningFlags()
focal_class.full_signature: public long[][] getWarningFlags()
focal_class.identifier: getWarningFlags
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.return: long[][]
focal_class.signature: long[][] getWarningFlags()
focal_method.body: public String getMessage() {
          return (output.getMessage());
      }
focal_method.class_method_signature: InChIToStructure.getMessage()
focal_method.full_signature: public String getMessage()
focal_method.identifier: getMessage
focal_method.invocations: getMessage
focal_method.modifiers: public
focal_method.parameters: ()
focal_method.return: String
focal_method.signature: String getMessage()