test_class.declarator: logger = LoggingToolFactory.createLoggingTool(PCSubstanceXMLReaderTest.class)
test_class.modifier: private static
test_class.original_string: private static ILoggingTool logger = LoggingToolFactory.createLoggingTool(PCSubstanceXMLReaderTest.class);
test_class.type: ILoggingTool
test_class.var_name: logger
test_class.file: storage/io/src/test/java/org/openscience/cdk/io/PCSubstanceXMLReaderTest.java
test_class.identifier: PCSubstanceXMLReaderTest
test_class.superclass: extends SimpleChemObjectReaderTest
test_case.body: @Test
      public void testAccepts() throws Exception {
          PCSubstanceXMLReader reader = new PCSubstanceXMLReader();
          Assert.assertTrue(reader.accepts(AtomContainer.class));
      }
test_case.class_method_signature: PCSubstanceXMLReaderTest.testAccepts()
test_case.full_signature: @Test public void testAccepts()
test_case.identifier: testAccepts
test_case.invocations: assertTrue accepts
test_case.modifiers: @Test public
test_case.parameters: ()
test_case.return: void
test_case.signature: void testAccepts()
focal_class.declarator: input
focal_class.modifier: private
focal_class.original_string: private Reader             input;
focal_class.type: Reader
focal_class.var_name: input
focal_class.declarator: parser
focal_class.modifier: private
focal_class.original_string: private XMLStreamReader    parser;
focal_class.type: XMLStreamReader
focal_class.var_name: parser
focal_class.declarator: parserHelper
focal_class.modifier: private
focal_class.original_string: private PubChemXMLHelper   parserHelper;
focal_class.type: PubChemXMLHelper
focal_class.var_name: parserHelper
focal_class.declarator: builder
focal_class.modifier: private
focal_class.original_string: private IChemObjectBuilder builder;
focal_class.type: IChemObjectBuilder
focal_class.var_name: builder
focal_class.declarator: molecule = null
focal_class.original_string: IAtomContainer             molecule = null;
focal_class.type: IAtomContainer
focal_class.var_name: molecule
focal_class.file: storage/io/src/main/java/org/openscience/cdk/io/PCSubstanceXMLReader.java
focal_class.identifier: PCSubstanceXMLReader
focal_class.class_method_signature: PCSubstanceXMLReader.PCSubstanceXMLReader(Reader input)
focal_class.full_signature: public  PCSubstanceXMLReader(Reader input)
focal_class.identifier: PCSubstanceXMLReader
focal_class.modifiers: public
focal_class.parameters: (Reader input)
focal_class.signature:  PCSubstanceXMLReader(Reader input)
focal_class.class_method_signature: PCSubstanceXMLReader.PCSubstanceXMLReader(InputStream input)
focal_class.full_signature: public  PCSubstanceXMLReader(InputStream input)
focal_class.identifier: PCSubstanceXMLReader
focal_class.modifiers: public
focal_class.parameters: (InputStream input)
focal_class.signature:  PCSubstanceXMLReader(InputStream input)
focal_class.class_method_signature: PCSubstanceXMLReader.PCSubstanceXMLReader()
focal_class.full_signature: public  PCSubstanceXMLReader()
focal_class.identifier: PCSubstanceXMLReader
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.signature:  PCSubstanceXMLReader()
focal_class.class_method_signature: PCSubstanceXMLReader.getFormat()
focal_class.full_signature: @Override public IResourceFormat getFormat()
focal_class.identifier: getFormat
focal_class.modifiers: @Override public
focal_class.parameters: ()
focal_class.return: IResourceFormat
focal_class.signature: IResourceFormat getFormat()
focal_class.class_method_signature: PCSubstanceXMLReader.setReader(Reader input)
focal_class.full_signature: @Override public void setReader(Reader input)
focal_class.identifier: setReader
focal_class.modifiers: @Override public
focal_class.parameters: (Reader input)
focal_class.return: void
focal_class.signature: void setReader(Reader input)
focal_class.class_method_signature: PCSubstanceXMLReader.setReader(InputStream input)
focal_class.full_signature: @Override public void setReader(InputStream input)
focal_class.identifier: setReader
focal_class.modifiers: @Override public
focal_class.parameters: (InputStream input)
focal_class.return: void
focal_class.signature: void setReader(InputStream input)
focal_class.class_method_signature: PCSubstanceXMLReader.accepts(Class<? extends IChemObject> classObject)
focal_class.full_signature: @Override public boolean accepts(Class<? extends IChemObject> classObject)
focal_class.identifier: accepts
focal_class.modifiers: @Override public
focal_class.parameters: (Class<? extends IChemObject> classObject)
focal_class.return: boolean
focal_class.signature: boolean accepts(Class<? extends IChemObject> classObject)
focal_class.class_method_signature: PCSubstanceXMLReader.read(T object)
focal_class.full_signature: @Override public T read(T object)
focal_class.identifier: read
focal_class.modifiers: @Override public
focal_class.parameters: (T object)
focal_class.return: T
focal_class.signature: T read(T object)
focal_class.class_method_signature: PCSubstanceXMLReader.close()
focal_class.full_signature: @Override public void close()
focal_class.identifier: close
focal_class.modifiers: @Override public
focal_class.parameters: ()
focal_class.return: void
focal_class.signature: void close()
focal_class.class_method_signature: PCSubstanceXMLReader.readMolecule()
focal_class.full_signature: private IAtomContainer readMolecule()
focal_class.identifier: readMolecule
focal_class.modifiers: private
focal_class.parameters: ()
focal_class.return: IAtomContainer
focal_class.signature: IAtomContainer readMolecule()
focal_class.superclass: extends DefaultChemObjectReader
focal_method.body: @Override
      public boolean accepts(Class<? extends IChemObject> classObject) {
          return IAtomContainer.class.isAssignableFrom(classObject);
      }
focal_method.class_method_signature: PCSubstanceXMLReader.accepts(Class<? extends IChemObject> classObject)
focal_method.full_signature: @Override public boolean accepts(Class<? extends IChemObject> classObject)
focal_method.identifier: accepts
focal_method.invocations: isAssignableFrom
focal_method.modifiers: @Override public
focal_method.parameters: (Class<? extends IChemObject> classObject)
focal_method.return: boolean
focal_method.signature: boolean accepts(Class<? extends IChemObject> classObject)