test_class.file: base/silent/src/test/java/org/openscience/cdk/silent/AminoAcidTest.java
test_class.identifier: AminoAcidTest
test_class.superclass: extends AbstractAminoAcidTest
test_case.body: @Test
      public void testAminoAcid() {
          IAminoAcid oAminoAcid = new AminoAcid();
          Assert.assertNotNull(oAminoAcid);
      }
test_case.class_method_signature: AminoAcidTest.testAminoAcid()
test_case.full_signature: @Test public void testAminoAcid()
test_case.identifier: testAminoAcid
test_case.invocations: assertNotNull
test_case.modifiers: @Test public
test_case.parameters: ()
test_case.return: void
test_case.signature: void testAminoAcid()
focal_class.declarator: serialVersionUID = -5032283549467862509L
focal_class.modifier: private static final
focal_class.original_string: private static final long serialVersionUID = -5032283549467862509L;
focal_class.type: long
focal_class.var_name: serialVersionUID
focal_class.declarator: nTerminus
focal_class.modifier: private
focal_class.original_string: private IAtom             nTerminus;
focal_class.type: IAtom
focal_class.var_name: nTerminus
focal_class.declarator: cTerminus
focal_class.modifier: private
focal_class.original_string: private IAtom             cTerminus;
focal_class.type: IAtom
focal_class.var_name: cTerminus
focal_class.file: base/silent/src/main/java/org/openscience/cdk/silent/AminoAcid.java
focal_class.identifier: AminoAcid
focal_class.interfaces: implements IAminoAcid, Serializable, Cloneable
focal_class.class_method_signature: AminoAcid.AminoAcid()
focal_class.full_signature: public  AminoAcid()
focal_class.identifier: AminoAcid
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.signature:  AminoAcid()
focal_class.class_method_signature: AminoAcid.getNTerminus()
focal_class.full_signature: @Override public IAtom getNTerminus()
focal_class.identifier: getNTerminus
focal_class.modifiers: @Override public
focal_class.parameters: ()
focal_class.return: IAtom
focal_class.signature: IAtom getNTerminus()
focal_class.class_method_signature: AminoAcid.addNTerminus(IAtom atom)
focal_class.full_signature: @Override public void addNTerminus(IAtom atom)
focal_class.identifier: addNTerminus
focal_class.modifiers: @Override public
focal_class.parameters: (IAtom atom)
focal_class.return: void
focal_class.signature: void addNTerminus(IAtom atom)
focal_class.class_method_signature: AminoAcid.setNTerminus(IAtom atom)
focal_class.full_signature: private void setNTerminus(IAtom atom)
focal_class.identifier: setNTerminus
focal_class.modifiers: private
focal_class.parameters: (IAtom atom)
focal_class.return: void
focal_class.signature: void setNTerminus(IAtom atom)
focal_class.class_method_signature: AminoAcid.getCTerminus()
focal_class.full_signature: @Override public IAtom getCTerminus()
focal_class.identifier: getCTerminus
focal_class.modifiers: @Override public
focal_class.parameters: ()
focal_class.return: IAtom
focal_class.signature: IAtom getCTerminus()
focal_class.class_method_signature: AminoAcid.addCTerminus(IAtom atom)
focal_class.full_signature: @Override public void addCTerminus(IAtom atom)
focal_class.identifier: addCTerminus
focal_class.modifiers: @Override public
focal_class.parameters: (IAtom atom)
focal_class.return: void
focal_class.signature: void addCTerminus(IAtom atom)
focal_class.class_method_signature: AminoAcid.setCTerminus(IAtom atom)
focal_class.full_signature: private void setCTerminus(IAtom atom)
focal_class.identifier: setCTerminus
focal_class.modifiers: private
focal_class.parameters: (IAtom atom)
focal_class.return: void
focal_class.signature: void setCTerminus(IAtom atom)
focal_class.class_method_signature: AminoAcid.clone()
focal_class.full_signature: @Override public IAminoAcid clone()
focal_class.identifier: clone
focal_class.modifiers: @Override public
focal_class.parameters: ()
focal_class.return: IAminoAcid
focal_class.signature: IAminoAcid clone()
focal_class.class_method_signature: AminoAcid.toString()
focal_class.full_signature: @Override public String toString()
focal_class.identifier: toString
focal_class.modifiers: @Override public
focal_class.parameters: ()
focal_class.return: String
focal_class.signature: String toString()
focal_class.superclass: extends Monomer
focal_method.body: public AminoAcid() {
          super();
      }
focal_method.class_method_signature: AminoAcid.AminoAcid()
focal_method.full_signature: public  AminoAcid()
focal_method.identifier: AminoAcid
focal_method.modifiers: public
focal_method.parameters: ()
focal_method.signature:  AminoAcid()