test_class.declarator: builder = SilentChemObjectBuilder.getInstance()
test_class.modifier: private final static
test_class.original_string: private final static IChemObjectBuilder builder = SilentChemObjectBuilder.getInstance();
test_class.type: IChemObjectBuilder
test_class.var_name: builder
test_class.file: tool/formula/src/test/java/org/openscience/cdk/formula/IsotopePatternSimilarityTest.java
test_class.identifier: IsotopePatternSimilarityTest
test_class.superclass: extends CDKTestCase
test_case.body: @Test
      public void testIsotopePatternSimilarity() {
          IsotopePatternSimilarity is = new IsotopePatternSimilarity();
          Assert.assertNotNull(is);
      }
test_case.class_method_signature: IsotopePatternSimilarityTest.testIsotopePatternSimilarity()
test_case.full_signature: @Test public void testIsotopePatternSimilarity()
test_case.identifier: testIsotopePatternSimilarity
test_case.invocations: assertNotNull
test_case.modifiers: @Test public
test_case.parameters: ()
test_case.return: void
test_case.signature: void testIsotopePatternSimilarity()
focal_class.declarator: chargeToAdd
focal_class.modifier: private
focal_class.original_string: private double        chargeToAdd;
focal_class.type: double
focal_class.var_name: chargeToAdd
focal_class.declarator: tolerance_ppm = 1
focal_class.modifier: private
focal_class.original_string: private double        tolerance_ppm = 1;
focal_class.type: double
focal_class.var_name: tolerance_ppm
focal_class.declarator: massE         = 0.0005485
focal_class.modifier: private static
focal_class.original_string: private static double massE         = 0.0005485;
focal_class.type: double
focal_class.var_name: massE
focal_class.file: tool/formula/src/main/java/org/openscience/cdk/formula/IsotopePatternSimilarity.java
focal_class.identifier: IsotopePatternSimilarity
focal_class.class_method_signature: IsotopePatternSimilarity.IsotopePatternSimilarity()
focal_class.full_signature: public  IsotopePatternSimilarity()
focal_class.identifier: IsotopePatternSimilarity
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.signature:  IsotopePatternSimilarity()
focal_class.class_method_signature: IsotopePatternSimilarity.seTolerance(double tolerance)
focal_class.full_signature: public void seTolerance(double tolerance)
focal_class.identifier: seTolerance
focal_class.modifiers: public
focal_class.parameters: (double tolerance)
focal_class.return: void
focal_class.signature: void seTolerance(double tolerance)
focal_class.class_method_signature: IsotopePatternSimilarity.getTolerance()
focal_class.full_signature: public double getTolerance()
focal_class.identifier: getTolerance
focal_class.modifiers: public
focal_class.parameters: ()
focal_class.return: double
focal_class.signature: double getTolerance()
focal_class.class_method_signature: IsotopePatternSimilarity.compare(IsotopePattern isoto1, IsotopePattern isoto2)
focal_class.full_signature: public double compare(IsotopePattern isoto1, IsotopePattern isoto2)
focal_class.identifier: compare
focal_class.modifiers: public
focal_class.parameters: (IsotopePattern isoto1, IsotopePattern isoto2)
focal_class.return: double
focal_class.signature: double compare(IsotopePattern isoto1, IsotopePattern isoto2)
focal_class.class_method_signature: IsotopePatternSimilarity.getClosestDataDiff(IsotopeContainer isoContainer, IsotopePattern pattern)
focal_class.full_signature: private int getClosestDataDiff(IsotopeContainer isoContainer, IsotopePattern pattern)
focal_class.identifier: getClosestDataDiff
focal_class.modifiers: private
focal_class.parameters: (IsotopeContainer isoContainer, IsotopePattern pattern)
focal_class.return: int
focal_class.signature: int getClosestDataDiff(IsotopeContainer isoContainer, IsotopePattern pattern)
focal_method.body: public IsotopePatternSimilarity() {}
focal_method.class_method_signature: IsotopePatternSimilarity.IsotopePatternSimilarity()
focal_method.full_signature: public  IsotopePatternSimilarity()
focal_method.identifier: IsotopePatternSimilarity
focal_method.modifiers: public
focal_method.parameters: ()
focal_method.signature:  IsotopePatternSimilarity()