title: Fast Training of Sparse Graph Neural Networks on Dense Hardware
abstract: Graph neural networks have become increasingly popular in recent years due to their ability to naturally encode relational input data and their ability to operate on large graphs by using a sparse representation of graph adjacency matrices. As we look to scale up these models using custom hardware, a natural assumption would be that we need hardware tailored to sparse operations and/or dynamic control flow. In this work, we question this assumption by scaling up sparse graph neural networks using a platform targeted at dense computation on fixed-size data. Drawing inspiration from optimization of numerical algorithms on sparse matrices, we develop techniques that enable training the sparse graph neural network model from Allamanis et al. (2018) in 13 minutes using a 512-core TPUv2 Pod, whereas the original training takes almost a day.
authors: Matej Balog Bart van Merriënboer Subhodeep Moitra Yujia Li Daniel Tarlow
hIndex: Daniel Tarlow 26