In 2001, Bee married actor Jason Jones, whom she first met in 1996.[5] They reside in Manhattan, New York.[44] In January 2006, she gave birth to Piper Bee-Jones; she returned to The Daily Show in March 2006.[44] On January 24, 2008, Bee announced a second pregnancy on air during a bit about the media's coverage of the 2008 presidential campaign.[45] In 2008, their second child, Fletcher Bee-Jones, was born.[46] Their third child, a daughter named Ripley, was born in late 2010.[47] During her third pregnancy, Bee joked she and Jones were "just procreating like we're farmers."[48]