In the 1930s, observers noticed the increasing pollution of the river, as fish migration from Laguna de Bay diminished. People ceased using the river's water for laundering in the 1960s, and ferry transport declined. By the 1970s, the river started to emanate offensive smells as a result of waste from swine and poultry establishments in the area where protected Marikina watershed is located (Pinugay,Baras,Rizal) and in the 1980s, fishing in the river was prohibited.