Naqvi is the principal of Jamia Urwa-tul-Wusqa and Jamia Jaffria, seminaries in Lahore and Gujranwala respectively. He is also the principal of Jamia Ummul Kitaab in Lahore, head of Deen-ul-Qayyim Online Islamic school and Siraat Education School System. Naqvi is also the editor of the monthly magazine Masharab-e-Naab.