Eleanor Howe|Raktim Sinha|Daniel Schlauch|John Quackenbush
RNA-Seq analysis in MeV
Dana-Farber Cancer Institute|Dana-Farber Cancer Institute|Dana-Farber Cancer Institute|Dana-Farber Cancer Institute
rnaseq exciting methodology leverages power highthroughput sequencing measure rna transcript counts unprecedented accuracy however data generated process extremely large biologistfriendly tools analyze sorely lacking multiexperiment viewer mev javabased desktop application allows advanced analysis gene expression data intuitive graphical user interface report significant enhancement mev allows analysis rnaseq data familiar powerful tools also report addition mev several rnaseqspecific functions addressing differences analysis requirements data type traditional gene expression data tools include automatic conversion functions raw count data processed rpkm fpkm values differential expression detection functional annotation enrichment detection based published methods