On the Value of PHH3 for Mitotic Figure Detection on H&E-stained Images
<|reference_start|>On the Value of PHH3 for Mitotic Figure Detection on H&E-stained Images: The count of mitotic figures (MFs) observed in hematoxylin and eosin (H&E)-stained slides is an important prognostic marker as it is a measure for tumor cell proliferation. However, the identification of MFs has a known low inter-rater agreement. Deep learning algorithms can standardize this task, but they require large amounts of annotated data for training and validation. Furthermore, label noise introduced during the annotation process may impede the algorithm's performance. Unlike H&E, the mitosis-specific antibody phospho-histone H3 (PHH3) specifically highlights MFs. Counting MFs on slides stained against PHH3 leads to higher agreement among raters and has therefore recently been used as a ground truth for the annotation of MFs in H&E. However, as PHH3 facilitates the recognition of cells indistinguishable from H&E stain alone, the use of this ground truth could potentially introduce noise into the H&E-related dataset, impacting model performance. This study analyzes the impact of PHH3-assisted MF annotation on inter-rater reliability and object level agreement through an extensive multi-rater experiment. We found that the annotators' object-level agreement increased when using PHH3-assisted labeling. Subsequently, MF detectors were evaluated on the resulting datasets to investigate the influence of PHH3-assisted labeling on the models' performance. Additionally, a novel dual-stain MF detector was developed to investigate the interpretation-shift of PHH3-assisted labels used in H&E, which clearly outperformed single-stain detectors. However, the PHH3-assisted labels did not have a positive effect on solely H&E-based models. The high performance of our dual-input detector reveals an information mismatch between the H&E and PHH3-stained images as the cause of this effect.<|reference_end|>
@article{ganz2024on,
    title={On the Value of PHH3 for Mitotic Figure Detection on H&E-stained Images},
    author={Jonathan Ganz, Christian Marzahl, Jonas Ammeling, Barbara Richter,
  Chlo'e Puget, Daniela Denk, Elena A. Demeter, Flaviu A. Tabaran, Gabriel
  Wasinger, Karoline Lipnik, Marco Tecilla, Matthew J. Valentine, Michael J.
  Dark, Niklas Abele, Pompei Bolfa, Ramona Erber, Robert Klopfleisch, Sophie
  Merz, Taryn A. Donovan, Samir Jabari, Christof A. Bertram, Katharina
  Breininger, Marc Aubreville},
    journal={arXiv preprint arXiv:2406.19899},
    year={2024},
    doi={10.1038/s41598-024-77244-6},
    archivePrefix={arXiv},
    eprint={2406.19899},
    primaryClass={cs.CV q-bio.QM}
}