A: The variant NC_000019.10:g.49861384G>T in gene PNKP is classified as 'Benign/Likely_benign' for Developmental_and_epileptic_encephalopathy,_12|not_specified. Molecular consequence: SO:0001627: intron_variant. Variant type: single_nucleotide_variant. Disease database links: MONDO:MONDO:0013389,MedGen:C3150988,OMIM:613722|MedGen:CN169374. Review status: criteria provided, multiple submitters, no conflicts.