Bug 125272 [Viewers] AbstractTreeViewer needs remove(Object parentElement, Object[] childElements)
There is an add(Object parentElement, Object[] childElements) but no corresponding remove(). Without this method, if you have an element that appears under multiple parents, the only way to get model and viewer in sync after removing the element from just one of its parents is calling refresh().
bundles/org.eclipse.jface/src/org/eclipse/jface/viewers/AbstractTreeViewer.java
Item current = getItem(x, y);
        if (current != null) {
            Item next = getNextItem(current, true);
            showItem(next == null ? current : next);
            return next;
        }
        return null;
    }
    
    public Item scrollUp(int x, int y) {
        Item current = getItem(x, y);
        if (current != null) {
            Item previous = getPreviousItem(current);
            showItem(previous == null ? current : previous);
            return previous;
        }
        return null;
    }
    /**
     * Sets the auto-expand level. The value 0 means that there is no
     * auto-expand; 1 means that top-level elements are expanded, but not their
     * children; 2 means that top-level elements are expanded, and their
     * children, but not grandchildren; and so on.
     * <p>
     * The value <code>ALL_LEVELS</code> means that all subtrees should be
     * expanded.
     * </p>
     * 
     * @param level
     *           non-negative level, or <code>ALL_LEVELS</code> to expand all