Bug 66094 IAE / Some copy operations don't pick up all of the collapsed regions
New feature to collapse regions of Java source - very nice. The way I copy between files is to position the cursor to the start of the file, use Ctrl+Shift+End to select all of the text between cursor and EOF, or sometimes Shift+Arrow keys to highlight a selected region. After this use Ctrl+C to copy into the clipboard. The collapsed regions are not included. Using Edit>Select All to select the file's contents does work, but holding down the shift key and using the keyboard arrows or Ctrl+End to traverse the selection cursor over collapsed regions doesn't pick up the collapsed bits.
org.eclipse.jdt.ui/ui/org/eclipse/jdt/internal/ui/javaeditor/JavaEditor.java
containingAnnotation= a;
					containingAnnotationPosition= p;
					currentAnnotation= p.length == length;
				}
			} else {
				int currentDistance= 0;
				
				if (forward) {
					currentDistance= p.getOffset() - offset;
					if (currentDistance < 0)
						currentDistance= endOfDocument + currentDistance;
					
					if (currentDistance < distance || currentDistance == distance && p.length < nextAnnotationPosition.length) {
						distance= currentDistance;
						nextAnnotation= a;
						nextAnnotationPosition= p;
					}
				} else {
					currentDistance= offset + length - (p.getOffset() + p.length);
					if (currentDistance < 0)
						currentDistance= endOfDocument + currentDistance;
					
					if (currentDistance < distance || currentDistance == distance && p.length < nextAnnotationPosition.length) {
						distance= currentDistance;
						nextAnnotation= a;
						nextAnnotationPosition= p;
					}
				}
			}
		}