Bug 15544 JavaDoc wizard includes non-selected packages
If you have two source folders: src and test, and tell the JavaDoc wizard to use only the packages in src, it will include any matching packages from the test source folder. Eg. If I have select the package 'ca.beq.tundra' in the 'src' folder, the generated JavaDocs will also include classes from the 'ca.beq.tundra' package in the 'test' folder. Using integration build 0502.
org.eclipse.jdt.ui/ui/org/eclipse/jdt/internal/ui/javadocexport/JavadocTreeWizardPage.java
return iJavaProject.getUnderlyingResource().getLocation().addTrailingSeparator().append(DOCUMENT_DIRECTORY).toOSString();
				}
			}
		} catch (JavaModelException e) {
			return ""; 
		} catch (NullPointerException e) {
			return ""; 
		}
		return ""; 
	}
	private void setOptionSetSettings() {
			if(!fStore.fromStandard()) {
				fCustomButton.setSelection(true);
				fDocletText.setText(fStore.getDocletPath());
				fDocletTypeText.setText(fStore.getDocletName());
				fDestinationText.setText(fStore.getDestination(fWizard.getProject()));
				fDestinationText.setEnabled(false);
				fDestinationBrowserButton.setEnabled(false);
				fDestinationLabel.setEnabled(false);
			} else {
				fStandardButton.setSelection(true);
				fDestinationText.setText(fStore.getDestination(fWizard.getProject()));
				fDocletText.setText(fStore.getDocletPath());
				fDocletTypeText.setText(fStore.getDocletName());
				fDocletText.setEnabled(false);
				fDocletLabel.setEnabled(false);
				fDocletTypeText.setEnabled(false);
				fDocletTypeLabel.setEnabled(false);
			}
	}