Bug 66094 IAE / Some copy operations don't pick up all of the collapsed regions
New feature to collapse regions of Java source - very nice. The way I copy between files is to position the cursor to the start of the file, use Ctrl+Shift+End to select all of the text between cursor and EOF, or sometimes Shift+Arrow keys to highlight a selected region. After this use Ctrl+C to copy into the clipboard. The collapsed regions are not included. Using Edit>Select All to select the file's contents does work, but holding down the shift key and using the keyboard arrows or Ctrl+End to traverse the selection cursor over collapsed regions doesn't pick up the collapsed bits.
org.eclipse.jdt.ui/ui/org/eclipse/jdt/internal/ui/javaeditor/JavaEditor.java
return;
				}
				
				
				OccurrencesFinder finder = new OccurrencesFinder(binding);
				message= finder.initialize(astRoot, selection.getOffset(), selection.getLength());
				if (message == null)
					matches= finder.perform();
			} else if (!fMarkMethodExitPoints) {
				if (!fStickyOccurrenceAnnotations)
					removeOccurrenceAnnotations();
				return;
			}
		} else if (!fMarkExceptionOccurrences) {
			if (!fStickyOccurrenceAnnotations)
				removeOccurrenceAnnotations();
			return;
		}
		
		Position[] positions= new Position[matches.size()];
		int i= 0;
		for (Iterator each= matches.iterator(); each.hasNext();) {
			ASTNode currentNode= (ASTNode)each.next();
			positions[i++]= new Position(currentNode.getStartPosition(), currentNode.getLength());
		}
		
		fOccurrencesFinderJob= new OccurrencesFinderJob(document, positions, selection);