Simple Question (Direct)
Simple Question
Q27472581
P703
Q631147
USER
Which taxon does two component heavy metal response transcriptional regulator    NRG857_07480 belong to ?
(Q27472581,P703,c(Q631147))
action filter_type
action find
entity Q27472581
relation P703
type Q631147
['Q27472581', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q631147 . resource:Q27472581 property:P703 ?x }
two component heavy metal response transcriptional regulator    NRG857_07480
action filter_type
action find
entity two component heavy metal response transcriptional regulator    NRG857_07480
relation found in taxon
type infraspecific name
['two component heavy metal response transcriptional regulator    NRG857_07480', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:infraspecific_name . resource:two_component_heavy_metal_response_transcriptional_regulator____NRG857_07480 property:found_in_taxon ?x }
[]
infraspecific name
Q21102934
SYSTEM
Escherichia coli O83:H1 str. NRG 857C
Q21102934
(Q27472581,P703,c(Q631147))
action filter_type
action find
entity Q27472581
relation P703
type Q631147
Two component heavy metal response transcriptional regulator NRG857_07480 belongs to [ANSWER]
['Q27472581', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q631147 . resource:Q27472581 property:P703 ?x }
Escherichia coli O83:H1 str. NRG 857C
Two component heavy metal response transcriptional regulator NRG857_07480 belongs to Escherichia coli O83:H1 str. NRG 857C
Escherichia coli O83:H1 str. NRG 857C
action filter_type
action find
entity two component heavy metal response transcriptional regulator    NRG857_07480
relation found in taxon
type infraspecific name
['two component heavy metal response transcriptional regulator    NRG857_07480', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:infraspecific_name . resource:two_component_heavy_metal_response_transcriptional_regulator____NRG857_07480 property:found_in_taxon ?x }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27472581
P681
Q5058355
USER
What is a component of that nutrient ?
(Q21102934,P681,c(Q5058355))
action filter_type
action find
entity Q27472581
relation P681
type Q5058355
['Q21102934', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q5058355 . resource:Q27472581 property:P681 ?m }
two component heavy metal response transcriptional regulator    NRG857_07480
action filter_type
action find
entity two component heavy metal response transcriptional regulator    NRG857_07480
relation cell component
type cellular component
['Escherichia coli O83:H1 str. NRG 857C', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:cellular_component . resource:two_component_heavy_metal_response_transcriptional_regulator____NRG857_07480 property:cell_component ?m }
[]
cellular component
Q3824358
SYSTEM
intracellular
Q3824358
(Q21102934,P681,c(Q5058355))
action filter_type
action find
entity Q27472581
relation P681
type Q5058355
A component of that nutrient is an [ANSWER]
['Q21102934', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q5058355 . resource:Q27472581 property:P681 ?m }
intracellular
A component of that nutrient is an intracellular
intracellular
action filter_type
action find
entity two component heavy metal response transcriptional regulator    NRG857_07480
relation cell component
type cellular component
['Escherichia coli O83:H1 str. NRG 857C', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:cellular_component . resource:two_component_heavy_metal_response_transcriptional_regulator____NRG857_07480 property:cell_component ?m }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q27472581
P702
Q863908
USER
How many nucleic acid sequences encodes two component heavy metal response transcriptional regulator    NRG857_07480 ?
(Q27472581,P702,c(Q863908))
action count
action filter_type
action find
entity Q27472581
relation P702
type Q863908
['Q27472581', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?s ) WHERE { resource:Q27472581 property:P702 ?r . ?r rdf:type ontology:Q863908 }
two component heavy metal response transcriptional regulator    NRG857_07480
action count
action filter_type
action find
entity two component heavy metal response transcriptional regulator    NRG857_07480
relation encoded by
type nucleic acid sequence
['two component heavy metal response transcriptional regulator    NRG857_07480', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?s ) WHERE { resource:two_component_heavy_metal_response_transcriptional_regulator____NRG857_07480 property:encoded_by ?r . ?r rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q23108311
(Q27472581,P702,c(Q863908))
action count
action filter_type
action find
entity Q27472581
relation P702
type Q863908
[ANSWER]
['Q27472581', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?s ) WHERE { resource:Q27472581 property:P702 ?r . ?r rdf:type ontology:Q863908 }
two component heavy metal response transcriptional regulator    NRG857_07480
1
action count
action filter_type
action find
entity two component heavy metal response transcriptional regulator    NRG857_07480
relation encoded by
type nucleic acid sequence
['two component heavy metal response transcriptional regulator    NRG857_07480', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?s ) WHERE { resource:two_component_heavy_metal_response_transcriptional_regulator____NRG857_07480 property:encoded_by ?r . ?r rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q23456607
P702
Q863908
USER
And how about anti-sigma factor    BT_3011?
(Q23456607,P702,c(Q863908))
action count
action filter_type
action find
entity Q23456607
relation P702
type Q863908
['Q23456607', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?o ) WHERE { resource:Q23456607 property:P702 ?f . ?f rdf:type ontology:Q863908 }
anti-sigma factor    BT_3011
action count
action filter_type
action find
entity anti-sigma factor    BT_3011
relation encoded by
type nucleic acid sequence
['anti-sigma factor    BT_3011', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?o ) WHERE { resource:anti-sigma_factor____BT_3011 property:encoded_by ?f . ?f rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q23357294
(Q23456607,P702,c(Q863908))
action count
action filter_type
action find
entity Q23456607
relation P702
type Q863908
[ANSWER]
['Q23456607', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?o ) WHERE { resource:Q23456607 property:P702 ?f . ?f rdf:type ontology:Q863908 }
anti-sigma factor    BT_3011
1
action count
action filter_type
action find
entity anti-sigma factor    BT_3011
relation encoded by
type nucleic acid sequence
['anti-sigma factor    BT_3011', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?o ) WHERE { resource:anti-sigma_factor____BT_3011 property:encoded_by ?f . ?f rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q21144028
Q863908
USER
And also tell me about Brain-enriched guanylate kinase-associated protein?
(Q21144028,P702,c(Q863908))
action count
action filter_type
action find
entity Q21144028
relation P702
type Q863908
['Q21144028', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?d ) WHERE { resource:Q21144028 property:P702 ?a . ?a rdf:type ontology:Q863908 }
Brain-enriched guanylate kinase-associated protein
action count
action filter_type
action find
entity Brain-enriched guanylate kinase-associated protein
relation encoded by
type nucleic acid sequence
['Brain-enriched guanylate kinase-associated protein', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?d ) WHERE { resource:Brain-enriched_guanylate_kinase-associated_protein property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
(Q21144028,P702,c(Q863908))
action count
action filter_type
action find
entity Q21144028
relation P702
type Q863908
[ANSWER]
['Q21144028', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?d ) WHERE { resource:Q21144028 property:P702 ?a . ?a rdf:type ontology:Q863908 }
1
action count
action filter_type
action find
entity Brain-enriched guanylate kinase-associated protein
relation encoded by
type nucleic acid sequence
['Brain-enriched guanylate kinase-associated protein', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?d ) WHERE { resource:Brain-enriched_guanylate_kinase-associated_protein property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q3824358
P361
Q5058355
USER
What is intracellular a portion of ?
(Q3824358,P361,c(Q5058355))
action filter_type
action find
entity Q3824358
relation P361
type Q5058355
['Q3824358', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?f WHERE { resource:Q3824358 property:P361 ?f . ?f rdf:type ontology:Q5058355 }
intracellular
action filter_type
action find
entity intracellular
relation part of
type cellular component
['intracellular', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?f WHERE { resource:intracellular property:part_of ?f . ?f rdf:type ontology:cellular_component }
[]
cellular component
Q22330431
SYSTEM
unencapsulated part of cell
Q22330431
(Q3824358,P361,c(Q5058355))
action filter_type
action find
entity Q3824358
relation P361
type Q5058355
Intracellular a portion of is an [ANSWER]
['Q3824358', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?f WHERE { resource:Q3824358 property:P361 ?f . ?f rdf:type ontology:Q5058355 }
unencapsulated part of cell
Intracellular a portion of is an unencapsulated part of cell
unencapsulated part of cell
action filter_type
action find
entity intracellular
relation part of
type cellular component
['intracellular', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?f WHERE { resource:intracellular property:part_of ?f . ?f rdf:type ontology:cellular_component }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q127702
Q5058355
USER
And also tell me about vacuole?
(Q127702,P361,c(Q5058355))
action filter_type
action find
entity Q127702
relation P361
type Q5058355
['Q127702', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?e WHERE { resource:Q127702 property:P361 ?e . ?e rdf:type ontology:Q5058355 }
vacuole
action filter_type
action find
entity vacuole
relation part of
type cellular component
['vacuole', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?e WHERE { resource:vacuole property:part_of ?e . ?e rdf:type ontology:cellular_component }
[]
cellular component
Q899827
SYSTEM
endomembrane system
Q899827
(Q127702,P361,c(Q5058355))
action filter_type
action find
entity Q127702
relation P361
type Q5058355
[ANSWER]
['Q127702', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?e WHERE { resource:Q127702 property:P361 ?e . ?e rdf:type ontology:Q5058355 }
endomembrane system
endomembrane system
action filter_type
action find
entity vacuole
relation part of
type cellular component
['vacuole', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?e WHERE { resource:vacuole property:part_of ?e . ?e rdf:type ontology:cellular_component }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q4886486 Q22330431
P361
Q5058355
USER
Which cellular components are a part of unencapsulated part of cell and cell envelope ?
AND((c(Q5058355),P361,Q22330431), (c(Q5058355),P361,Q4886486))
action filter_type
action intersection
action find_reverse
entity Q22330431
relation P361
action find_reverse
entity Q4886486
relation P361
type Q5058355
{'AND': [[{'concept': 'Q5058355'}, 'P361', 'Q22330431'], [{'concept': 'Q5058355'}, 'P361', 'Q4886486']]}
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q5058355 . ?m property:P361 resource:Q4886486 . ?m property:P361 resource:Q22330431 }
cell envelope unencapsulated part of cell
action filter_type
action intersection
action find_reverse
entity unencapsulated part of cell
relation part of
action find_reverse
entity cell envelope
relation part of
type cellular component
{'AND': [[{'concept': 'cellular component'}, 'part of', 'unencapsulated part of cell'], [{'concept': 'cellular component'}, 'part of', 'cell envelope']]}
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:cellular_component . ?m property:part_of resource:cell_envelope . ?m property:part_of resource:unencapsulated_part_of_cell }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
AND((c(Q5058355),P361,Q22330431), (c(Q5058355),P361,Q4886486))
action filter_type
action intersection
action find_reverse
entity Q22330431
relation P361
action find_reverse
entity Q4886486
relation P361
type Q5058355
The [ANSWER] is a part of unencapsulated part of cell and cell envelope
{'AND': [[{'concept': 'Q5058355'}, 'P361', 'Q22330431'], [{'concept': 'Q5058355'}, 'P361', 'Q4886486']]}
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q5058355 . ?m property:P361 resource:Q4886486 . ?m property:P361 resource:Q22330431 }
plasma membrane
The plasma membrane is a part of unencapsulated part of cell and cell envelope
plasma membrane
action filter_type
action intersection
action find_reverse
entity unencapsulated part of cell
relation part of
action find_reverse
entity cell envelope
relation part of
type cellular component
{'AND': [[{'concept': 'cellular component'}, 'part of', 'unencapsulated part of cell'], [{'concept': 'cellular component'}, 'part of', 'cell envelope']]}
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:cellular_component . ?m property:part_of resource:cell_envelope . ?m property:part_of resource:unencapsulated_part_of_cell }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type|Indirect
P361
Q5058355 Q15989253 Q5058355
USER
How many cellular components are more number of parts and cellular components a component of than that cellular component ?
(c(Q15989253)|c(Q5058355),P361,c(Q5058355))
action count
action greater
action union
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q15989253
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_multi_types
action find_reverse
entity Q29548
relation P361
type Q15989253
type Q5058355
[[{'concept': 'Q15989253'}, {'concept': 'Q5058355'}], 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?i ) AS ?n ) WHERE { { SELECT DISTINCT ?i ( COUNT ( ?o ) AS ?r ) WHERE { VALUES ( ?g ) { ( ontology:Q15989253 ) ( ontology:Q5058355 ) } . ?o rdf:type ?g } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?m ) AS ?t ) WHERE { ?m property:P361 resource:Q29548 . { { ?m rdf:type ontology:Q15989253 } UNION { ?m rdf:type ontology:Q5058355 } } } } . FILTER ( ?r > ?t ) }
action count
action greater
action union
action find_reverse_tuple_counts
relation part of
type cellular component
type part
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_multi_types
action find_reverse
entity plasma membrane
relation part of
type part
type cellular component
[[{'concept': 'part'}, {'concept': 'cellular component'}], 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?i ) AS ?n ) WHERE { { SELECT DISTINCT ?i ( COUNT ( ?o ) AS ?r ) WHERE { VALUES ( ?g ) { ( ontology:part ) ( ontology:cellular_component ) } . ?o rdf:type ?g } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?m ) AS ?t ) WHERE { ?m property:part_of resource:plasma_membrane . { { ?m rdf:type ontology:part } UNION { ?m rdf:type ontology:cellular_component } } } } . FILTER ( ?r > ?t ) }
[]
cellular component part cellular component
SYSTEM
10
Q21106124 Q22327479 Q14329032 Q21109092 Q22329851 Q14863372 Q22329162 Q2914458 Q22327475 Q899827
(c(Q15989253)|c(Q5058355),P361,c(Q5058355))
action count
action greater
action union
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q15989253
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_multi_types
action find_reverse
entity Q29548
relation P361
type Q15989253
type Q5058355
[ANSWER]
[[{'concept': 'Q15989253'}, {'concept': 'Q5058355'}], 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?i ) AS ?n ) WHERE { { SELECT DISTINCT ?i ( COUNT ( ?o ) AS ?r ) WHERE { VALUES ( ?g ) { ( ontology:Q15989253 ) ( ontology:Q5058355 ) } . ?o rdf:type ?g } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?m ) AS ?t ) WHERE { ?m property:P361 resource:Q29548 . { { ?m rdf:type ontology:Q15989253 } UNION { ?m rdf:type ontology:Q5058355 } } } } . FILTER ( ?r > ?t ) }
viral capsid presynapse endoplasmic reticulum membrane nuclear outer membrane-endoplasmic reticulum membrane network virus tail myelin sheath ventral disc extracellular space postsynapse endomembrane system
10
action count
action greater
action union
action find_reverse_tuple_counts
relation part of
type cellular component
type part
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_multi_types
action find_reverse
entity plasma membrane
relation part of
type part
type cellular component
[[{'concept': 'part'}, {'concept': 'cellular component'}], 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?i ) AS ?n ) WHERE { { SELECT DISTINCT ?i ( COUNT ( ?o ) AS ?r ) WHERE { VALUES ( ?g ) { ( ontology:part ) ( ontology:cellular_component ) } . ?o rdf:type ?g } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?m ) AS ?t ) WHERE { ?m property:part_of resource:plasma_membrane . { { ?m rdf:type ontology:part } UNION { ?m rdf:type ontology:cellular_component } } } } . FILTER ( ?r > ?t ) }
[]