Simple Question (Direct)
Simple Question
Q27547211
P681
Q15989253
USER
Which part is a component of Spo75p YLL005C ?
(Q27547211,P681,c(Q15989253))
action filter_type
action find
entity Q27547211
relation P681
type Q15989253
['Q27547211', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?x WHERE { resource:Q27547211 property:P681 ?x . ?x rdf:type ontology:Q15989253 }
Spo75p YLL005C
action filter_type
action find
entity Spo75p YLL005C
relation cell component
type part
['Spo75p YLL005C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?x WHERE { resource:Spo75p_YLL005C property:cell_component ?x . ?x rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q27547211,P681,c(Q15989253))
action filter_type
action find
entity Q27547211
relation P681
type Q15989253
[ANSWER] is a component of Spo75p YLL005C
['Q27547211', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?x WHERE { resource:Q27547211 property:P681 ?x . ?x rdf:type ontology:Q15989253 }
membrane
Membrane is a component of Spo75p YLL005C
membrane
action filter_type
action find
entity Spo75p YLL005C
relation cell component
type part
['Spo75p YLL005C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?x WHERE { resource:Spo75p_YLL005C property:cell_component ?x . ?x rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27547211
P702
Q863908
USER
Which nucleic acid sequence encodes Spo75p YLL005C ?
(Q27547211,P702,c(Q863908))
action filter_type
action find
entity Q27547211
relation P702
type Q863908
['Q27547211', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?s WHERE { resource:Q27547211 property:P702 ?s . ?s rdf:type ontology:Q863908 }
Spo75p YLL005C
action filter_type
action find
entity Spo75p YLL005C
relation encoded by
type nucleic acid sequence
['Spo75p YLL005C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?s WHERE { resource:Spo75p_YLL005C property:encoded_by ?s . ?s rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27527150
SYSTEM
Spo75p YLL005C
Q27527150
(Q27547211,P702,c(Q863908))
action filter_type
action find
entity Q27547211
relation P702
type Q863908
[ANSWER] encodes [ANSWER]
['Q27547211', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?s WHERE { resource:Q27547211 property:P702 ?s . ?s rdf:type ontology:Q863908 }
Spo75p YLL005C
Spo75p YLL005C encodes Spo75p YLL005C
Spo75p YLL005C
action filter_type
action find
entity Spo75p YLL005C
relation encoded by
type nucleic acid sequence
['Spo75p YLL005C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?s WHERE { resource:Spo75p_YLL005C property:encoded_by ?s . ?s rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q27547211 Q21986794
P702
Q863908
USER
How many nucleic acid sequences genes encode Spo75p YLL005C or E3 ubiquitin-protein ligase SIAH1B ?
(Q27547211,P702,c(Q863908)) (Q21986794,P702,c(Q863908))
action count
action union
action filter_type
action find
entity Q27547211
relation P702
type Q863908
action filter_type
action find
entity Q21986794
relation P702
type Q863908
['Q27547211', 'P702', {'concept': 'Q863908'}] ['Q21986794', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?s ) WHERE { { resource:Q27547211 property:P702 ?t . ?t rdf:type ontology:Q863908 } UNION { resource:Q21986794 property:P702 ?t . ?t rdf:type ontology:Q863908 } }
Spo75p YLL005C E3 ubiquitin-protein ligase SIAH1B
action count
action union
action filter_type
action find
entity Spo75p YLL005C
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity E3 ubiquitin-protein ligase SIAH1B
relation encoded by
type nucleic acid sequence
['Spo75p YLL005C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['E3 ubiquitin-protein ligase SIAH1B', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?s ) WHERE { { resource:Spo75p_YLL005C property:encoded_by ?t . ?t rdf:type ontology:nucleic_acid_sequence } UNION { resource:E3_ubiquitin-protein_ligase_SIAH1B property:encoded_by ?t . ?t rdf:type ontology:nucleic_acid_sequence } }
[]
nucleic acid sequence
SYSTEM
2
Q18254077 Q27527150
(Q27547211,P702,c(Q863908)) (Q21986794,P702,c(Q863908))
action count
action union
action filter_type
action find
entity Q27547211
relation P702
type Q863908
action filter_type
action find
entity Q21986794
relation P702
type Q863908
[ANSWER]
['Q27547211', 'P702', {'concept': 'Q863908'}] ['Q21986794', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?s ) WHERE { { resource:Q27547211 property:P702 ?t . ?t rdf:type ontology:Q863908 } UNION { resource:Q21986794 property:P702 ?t . ?t rdf:type ontology:Q863908 } }
Siah1b Spo75p YLL005C
2
action count
action union
action filter_type
action find
entity Spo75p YLL005C
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity E3 ubiquitin-protein ligase SIAH1B
relation encoded by
type nucleic acid sequence
['Spo75p YLL005C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['E3 ubiquitin-protein ligase SIAH1B', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?s ) WHERE { { resource:Spo75p_YLL005C property:encoded_by ?t . ?t rdf:type ontology:nucleic_acid_sequence } UNION { resource:E3_ubiquitin-protein_ligase_SIAH1B property:encoded_by ?t . ?t rdf:type ontology:nucleic_acid_sequence } }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P129
Q8386 Q79529 Q181394
USER
Which nutrients communicates with min number of drugs and chemical substances ?
(c(Q181394),P129,c(Q8386)|c(Q79529))
action argmin
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q79529
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q79529'}]]
SELECT DISTINCT ?r WHERE { { SELECT DISTINCT ( MIN ( ?k ) AS ?m ) { SELECT DISTINCT ( COUNT ( ?j ) AS ?k ) ?p WHERE { { ?p property:P129 ?j . ?p rdf:type ontology:Q181394 . ?j rdf:type ontology:Q79529 } UNION { ?p property:P129 ?j . ?p rdf:type ontology:Q181394 . ?j rdf:type ontology:Q8386 } } GROUP BY ?p } } . FILTER ( ?s = ?m ) . { SELECT DISTINCT ( COUNT ( ?i ) AS ?s ) ?r WHERE { VALUES ( ?z ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } . ?i rdf:type ?z } GROUP BY ?r } }
action argmin
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'chemical substance'}]]
SELECT DISTINCT ?r WHERE { { SELECT DISTINCT ( MIN ( ?k ) AS ?m ) { SELECT DISTINCT ( COUNT ( ?j ) AS ?k ) ?p WHERE { { ?p property:physically_interacts_with ?j . ?p rdf:type ontology:nutrient . ?j rdf:type ontology:chemical_substance } UNION { ?p property:physically_interacts_with ?j . ?p rdf:type ontology:nutrient . ?j rdf:type ontology:drug } } GROUP BY ?p } } . FILTER ( ?s = ?m ) . { SELECT DISTINCT ( COUNT ( ?i ) AS ?s ) ?r WHERE { VALUES ( ?z ) { ( ontology:drug ) ( ontology:chemical_substance ) } . ?i rdf:type ?z } GROUP BY ?r } }
[]
drug chemical substance nutrient
Q15324125 Q1407929 Q13561329
SYSTEM
Transient receptor potential cation channel subfamily V member 4, Cytochrome P450 1A1, Reelin
Q21494718 Q21108693 Q13561329 Q21110295 Q1407929 Q21173169 Q21113552 Q21496578 Q21496575 Q21496576 Q15324125 Q21110296 Q21154430 Q3931282 Q21139123 Q21496918 Q5014947 Q21172884 Q21172886 Q315860 Q21495791
(c(Q181394),P129,c(Q8386)|c(Q79529))
action argmin
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q79529
[ANSWERS] communicate with min number of drugs and chemical substances
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q79529'}]]
SELECT DISTINCT ?r WHERE { { SELECT DISTINCT ( MIN ( ?k ) AS ?m ) { SELECT DISTINCT ( COUNT ( ?j ) AS ?k ) ?p WHERE { { ?p property:P129 ?j . ?p rdf:type ontology:Q181394 . ?j rdf:type ontology:Q79529 } UNION { ?p property:P129 ?j . ?p rdf:type ontology:Q181394 . ?j rdf:type ontology:Q8386 } } GROUP BY ?p } } . FILTER ( ?s = ?m ) . { SELECT DISTINCT ( COUNT ( ?i ) AS ?s ) ?r WHERE { VALUES ( ?z ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } . ?i rdf:type ?z } GROUP BY ?r } }
Lysophosphatidic acid receptor 2 G-protein coupled receptor 87 Reelin Galanin receptor type 2 Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 ATP-sensitive inward rectifier potassium channel 14 Lysophosphatidic acid receptor 3 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Transient receptor potential cation channel subfamily V member 4 Galanin receptor type 3 Lysophosphatidic acid receptor 4 Calcitonin receptor Lysophosphatidic acid receptor 2 Lysophosphatidic acid receptor 1 Cytochrome P450 1B1 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Calcitonin Metabotropic glutamate receptor 5
Transient receptor potential cation channel subfamily V member 4, Cytochrome P450 1A1 and Reelin communicate with min number of drugs and chemical substances
Transient receptor potential cation channel subfamily V member 4 Cytochrome P450 1A1 Reelin
action argmin
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'chemical substance'}]]
SELECT DISTINCT ?r WHERE { { SELECT DISTINCT ( MIN ( ?k ) AS ?m ) { SELECT DISTINCT ( COUNT ( ?j ) AS ?k ) ?p WHERE { { ?p property:physically_interacts_with ?j . ?p rdf:type ontology:nutrient . ?j rdf:type ontology:chemical_substance } UNION { ?p property:physically_interacts_with ?j . ?p rdf:type ontology:nutrient . ?j rdf:type ontology:drug } } GROUP BY ?p } } . FILTER ( ?s = ?m ) . { SELECT DISTINCT ( COUNT ( ?i ) AS ?s ) ?r WHERE { VALUES ( ?z ) { ( ontology:drug ) ( ontology:chemical_substance ) } . ?i rdf:type ?z } GROUP BY ?r } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q27547211 Q21413767
P702
Q863908
USER
How many nucleic acid sequences are the gene that encodes Spo75p YLL005C or let-7a ?
(Q27547211,P702,c(Q863908)) (Q21413767,P702,c(Q863908))
action count
action union
action filter_type
action find
entity Q27547211
relation P702
type Q863908
action filter_type
action find
entity Q21413767
relation P702
type Q863908
['Q27547211', 'P702', {'concept': 'Q863908'}] ['Q21413767', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?n ) WHERE { VALUES ( ?b ) { ( resource:Q27547211 ) ( resource:Q21413767 ) } . ?b property:P702 ?a }
Spo75p YLL005C let-7a
action count
action union
action filter_type
action find
entity Spo75p YLL005C
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity let-7a
relation encoded by
type nucleic acid sequence
['Spo75p YLL005C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['let-7a', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?n ) WHERE { VALUES ( ?b ) { ( resource:Spo75p_YLL005C ) ( resource:let-7a ) } . ?b property:encoded_by ?a }
[]
nucleic acid sequence
SYSTEM
2
Q18304129 Q27527150
(Q27547211,P702,c(Q863908)) (Q21413767,P702,c(Q863908))
action count
action union
action filter_type
action find
entity Q27547211
relation P702
type Q863908
action filter_type
action find
entity Q21413767
relation P702
type Q863908
[ANSWER]
['Q27547211', 'P702', {'concept': 'Q863908'}] ['Q21413767', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?n ) WHERE { VALUES ( ?b ) { ( resource:Q27547211 ) ( resource:Q21413767 ) } . ?b property:P702 ?a }
Mirlet7a-1 Spo75p YLL005C
2
action count
action union
action filter_type
action find
entity Spo75p YLL005C
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity let-7a
relation encoded by
type nucleic acid sequence
['Spo75p YLL005C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['let-7a', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?n ) WHERE { VALUES ( ?b ) { ( resource:Spo75p_YLL005C ) ( resource:let-7a ) } . ?b property:encoded_by ?a }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q2996394 Q181394
USER
How many biological processes are a biological processes that exactly 29 nutrients are involved in ?
(c(Q181394),P682,c(Q2996394))
action count
action equal
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
value 29
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?z ) WHERE { { SELECT DISTINCT ?m ( COUNT ( ?s ) AS ?q ) WHERE { ?s property:P682 ?m . ?s rdf:type ontology:Q181394 . ?m rdf:type ontology:Q2996394 } GROUP BY ?m } . FILTER ( ?q = 29 ) }
action count
action equal
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
value 29
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?z ) WHERE { { SELECT DISTINCT ?m ( COUNT ( ?s ) AS ?q ) WHERE { ?s property:biological_process ?m . ?s rdf:type ontology:nutrient . ?m rdf:type ontology:biological_process } GROUP BY ?m } . FILTER ( ?q = 29 ) }
[]
biological process nutrient
SYSTEM
2
Q15314382 Q14851921
(c(Q181394),P682,c(Q2996394))
action count
action equal
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
value 29
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?z ) WHERE { { SELECT DISTINCT ?m ( COUNT ( ?s ) AS ?q ) WHERE { ?s property:P682 ?m . ?s rdf:type ontology:Q181394 . ?m rdf:type ontology:Q2996394 } GROUP BY ?m } . FILTER ( ?q = 29 ) }
natural killer cell mediated cytotoxicity hormone metabolic process
2
action count
action equal
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
value 29
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?z ) WHERE { { SELECT DISTINCT ?m ( COUNT ( ?s ) AS ?q ) WHERE { ?s property:biological_process ?m . ?s rdf:type ontology:nutrient . ?m rdf:type ontology:biological_process } GROUP BY ?m } . FILTER ( ?q = 29 ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q21169447 Q21413767
P702
Q863908
USER
Which nucleic acid sequences genes encode let-7a or hypothetical protein    CTL0679 ?
OR((Q21413767,P702,c(Q863908)), (Q21169447,P702,c(Q863908)))
action filter_type
action union
action find
entity Q21413767
relation P702
action find
entity Q21169447
relation P702
type Q863908
{'OR': [['Q21413767', 'P702', {'concept': 'Q863908'}], ['Q21169447', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?t WHERE { { VALUES ( ?y ) { ( resource:Q21413767 ) ( resource:Q21169447 ) } . ?y property:P702 ?t } . ?t rdf:type ontology:Q863908 }
hypothetical protein    CTL0679 let-7a
action filter_type
action union
action find
entity let-7a
relation encoded by
action find
entity hypothetical protein    CTL0679
relation encoded by
type nucleic acid sequence
{'OR': [['let-7a', 'encoded by', {'concept': 'nucleic acid sequence'}], ['hypothetical protein    CTL0679', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?t WHERE { { VALUES ( ?y ) { ( resource:let-7a ) ( resource:hypothetical_protein____CTL0679 ) } . ?y property:encoded_by ?t } . ?t rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18304129 Q21169167
SYSTEM
Mirlet7a-1, hypothetical protein    CTL0679
Q18304129 Q21169167
OR((Q21413767,P702,c(Q863908)), (Q21169447,P702,c(Q863908)))
action filter_type
action union
action find
entity Q21413767
relation P702
action find
entity Q21169447
relation P702
type Q863908
[ANSWERS]
{'OR': [['Q21413767', 'P702', {'concept': 'Q863908'}], ['Q21169447', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?t WHERE { { VALUES ( ?y ) { ( resource:Q21413767 ) ( resource:Q21169447 ) } . ?y property:P702 ?t } . ?t rdf:type ontology:Q863908 }
Mirlet7a-1 hypothetical protein    CTL0679
Mirlet7a-1 and hypothetical protein CTL0679 encode let-7a or hypothetical protein CTL0679
Mirlet7a-1 hypothetical protein    CTL0679
action filter_type
action union
action find
entity let-7a
relation encoded by
action find
entity hypothetical protein    CTL0679
relation encoded by
type nucleic acid sequence
{'OR': [['let-7a', 'encoded by', {'concept': 'nucleic acid sequence'}], ['hypothetical protein    CTL0679', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?t WHERE { { VALUES ( ?y ) { ( resource:let-7a ) ( resource:hypothetical_protein____CTL0679 ) } . ?y property:encoded_by ?t } . ?t rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q13561329
P684
Q863908
USER
Which nucleic acid sequence is Reelin an orthlogous gene of ?
(c(Q863908),P684,Q13561329)
action filter_type
action find_reverse
entity Q13561329
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q13561329']
SELECT DISTINCT ?l WHERE { ?l property:P684 resource:Q13561329 . ?l rdf:type ontology:Q863908 }
Reelin
action filter_type
action find_reverse
entity Reelin
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Reelin']
SELECT DISTINCT ?l WHERE { ?l property:ortholog resource:Reelin . ?l rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q14331135
SYSTEM
Reln
Q14331135
(c(Q863908),P684,Q13561329)
action filter_type
action find_reverse
entity Q13561329
relation P684
type Q863908
[ANSWER] is Reelin an orthlogous gene of
[{'concept': 'Q863908'}, 'P684', 'Q13561329']
SELECT DISTINCT ?l WHERE { ?l property:P684 resource:Q13561329 . ?l rdf:type ontology:Q863908 }
Reln
Reln is Reelin an orthlogous gene of
Reln
action filter_type
action find_reverse
entity Reelin
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Reelin']
SELECT DISTINCT ?l WHERE { ?l property:ortholog resource:Reelin . ?l rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q14331135
P688
Q181394
USER
Which nutrient is encoded by that nucleic acid sequence ?
(Q14331135,P688,c(Q181394))
action filter_type
action find
entity Q14331135
relation P688
type Q181394
['Q14331135', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?r WHERE { resource:Q14331135 property:P688 ?r . ?r rdf:type ontology:Q181394 }
Reln
action filter_type
action find
entity Reln
relation encodes
type nutrient
['Reln', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?r WHERE { resource:Reln property:encodes ?r . ?r rdf:type ontology:nutrient }
[]
nutrient
Q14331165
SYSTEM
Reelin
Q14331165
(Q14331135,P688,c(Q181394))
action filter_type
action find
entity Q14331135
relation P688
type Q181394
[ANSWER] is encoded by that nucleic acid sequence
['Q14331135', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?r WHERE { resource:Q14331135 property:P688 ?r . ?r rdf:type ontology:Q181394 }
Reelin
Reelin is encoded by that nucleic acid sequence
Reelin
action filter_type
action find
entity Reln
relation encodes
type nutrient
['Reln', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?r WHERE { resource:Reln property:encodes ?r . ?r rdf:type ontology:nutrient }
[]