Simple Question (Direct)
Simple Question
Q27550981
P681
Q15989253
USER
Which parts are the components of cytochrome c oxidase subunit 1 Q0045 ?
(Q27550981,P681,c(Q15989253))
action filter_type
action find
entity Q27550981
relation P681
type Q15989253
['Q27550981', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?q WHERE { resource:Q27550981 property:P681 ?q . ?q rdf:type ontology:Q15989253 }
cytochrome c oxidase subunit 1 Q0045
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation cell component
type part
['cytochrome c oxidase subunit 1 Q0045', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?q WHERE { resource:cytochrome_c_oxidase_subunit_1_Q0045 property:cell_component ?q . ?q rdf:type ontology:part }
[]
part
Q39572 Q14349455
SYSTEM
mitochondrion, membrane
Q39572 Q14349455
(Q27550981,P681,c(Q15989253))
action filter_type
action find
entity Q27550981
relation P681
type Q15989253
The [ANSWERS] are the components of cytochrome c oxidase subunit 1 Q0045
['Q27550981', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?q WHERE { resource:Q27550981 property:P681 ?q . ?q rdf:type ontology:Q15989253 }
mitochondrion membrane
The mitochondrion and membrane are the components of cytochrome c oxidase subunit 1 Q0045
mitochondrion membrane
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation cell component
type part
['cytochrome c oxidase subunit 1 Q0045', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?q WHERE { resource:cytochrome_c_oxidase_subunit_1_Q0045 property:cell_component ?q . ?q rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27550981
P702
Q863908
USER
Which gene encodes cytochrome c oxidase subunit 1 Q0045 ?
(Q27550981,P702,c(Q863908))
action filter_type
action find
entity Q27550981
relation P702
type Q863908
['Q27550981', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q27550981 property:P702 ?a . ?a rdf:type ontology:Q863908 }
cytochrome c oxidase subunit 1 Q0045
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation encoded by
type nucleic acid sequence
['cytochrome c oxidase subunit 1 Q0045', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:cytochrome_c_oxidase_subunit_1_Q0045 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27543918
SYSTEM
cytochrome c oxidase subunit 1 Q0045
Q27543918
(Q27550981,P702,c(Q863908))
action filter_type
action find
entity Q27550981
relation P702
type Q863908
[ANSWER] encodes [ANSWER]
['Q27550981', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q27550981 property:P702 ?a . ?a rdf:type ontology:Q863908 }
cytochrome c oxidase subunit 1 Q0045
Cytochrome c oxidase subunit 1 Q0045 encodes cytochrome c oxidase subunit 1 Q0045
cytochrome c oxidase subunit 1 Q0045
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation encoded by
type nucleic acid sequence
['cytochrome c oxidase subunit 1 Q0045', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:cytochrome_c_oxidase_subunit_1_Q0045 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27550981
P703
Q631147
USER
Which infraspecific name is that nutrient found in ?
(Q27543918,P703,c(Q631147))
action filter_type
action find
entity Q27550981
relation P703
type Q631147
['Q27543918', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?x WHERE { resource:Q27550981 property:P703 ?x . ?x rdf:type ontology:Q631147 }
cytochrome c oxidase subunit 1 Q0045
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation found in taxon
type infraspecific name
['cytochrome c oxidase subunit 1 Q0045', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?x WHERE { resource:cytochrome_c_oxidase_subunit_1_Q0045 property:found_in_taxon ?x . ?x rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27543918,P703,c(Q631147))
action filter_type
action find
entity Q27550981
relation P703
type Q631147
[ANSWER] is that nutrient found in
['Q27543918', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?x WHERE { resource:Q27550981 property:P703 ?x . ?x rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c is that nutrient found in
Saccharomyces cerevisiae S288c
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation found in taxon
type infraspecific name
['cytochrome c oxidase subunit 1 Q0045', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?x WHERE { resource:cytochrome_c_oxidase_subunit_1_Q0045 property:found_in_taxon ?x . ?x rdf:type ontology:infraspecific_name }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type|Indirect
P703
Q631147 Q863908 Q181394
USER
How many infraspecific names are lesser number of nucleic acid sequences or nutrients a part of than that infraspecific name ?
(c(Q863908)|c(Q181394),P703,c(Q631147))
action count
action less
action union
action find_reverse_tuple_counts
relation P703
type Q631147
type Q863908
action find_reverse_tuple_counts
relation P703
type Q631147
type Q181394
action count
action filter_multi_types
action find_reverse
entity Q27510868
relation P703
type Q863908
type Q181394
[[{'concept': 'Q863908'}, {'concept': 'Q181394'}], 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?k ) WHERE { { SELECT DISTINCT ?n ( COUNT ( ?q ) AS ?j ) WHERE { { ?q property:P703 ?n . ?n rdf:type ontology:Q631147 . ?q rdf:type ontology:Q863908 } UNION { ?q property:P703 ?n . ?n rdf:type ontology:Q631147 . ?q rdf:type ontology:Q181394 } } GROUP BY ?n } . { SELECT DISTINCT ( COUNT ( ?s ) AS ?u ) WHERE { ?s property:P703 resource:Q27510868 . { VALUES ( ?o ) { ( ontology:Q181394 ) ( ontology:Q863908 ) } . ?s rdf:type ?o } } } . FILTER ( ?j < ?u ) }
action count
action less
action union
action find_reverse_tuple_counts
relation found in taxon
type infraspecific name
type nucleic acid sequence
action find_reverse_tuple_counts
relation found in taxon
type infraspecific name
type nutrient
action count
action filter_multi_types
action find_reverse
entity Saccharomyces cerevisiae S288c
relation found in taxon
type nucleic acid sequence
type nutrient
[[{'concept': 'nucleic acid sequence'}, {'concept': 'nutrient'}], 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?k ) WHERE { { SELECT DISTINCT ?n ( COUNT ( ?q ) AS ?j ) WHERE { { ?q property:found_in_taxon ?n . ?n rdf:type ontology:infraspecific_name . ?q rdf:type ontology:nucleic_acid_sequence } UNION { ?q property:found_in_taxon ?n . ?n rdf:type ontology:infraspecific_name . ?q rdf:type ontology:nutrient } } GROUP BY ?n } . { SELECT DISTINCT ( COUNT ( ?s ) AS ?u ) WHERE { ?s property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c . { VALUES ( ?o ) { ( ontology:nutrient ) ( ontology:nucleic_acid_sequence ) } . ?s rdf:type ?o } } } . FILTER ( ?j < ?u ) }
[]
infraspecific name nucleic acid sequence nutrient
SYSTEM
75
Q21102990 Q21102991 Q21102992 Q21102993 Q21102994 Q21102995 Q21102996 Q21102997 Q21102999 Q21102960 Q21065229 Q21079489 Q21102919 Q21102943 Q21102942 Q21102941 Q21102940 Q21102947 Q21102946 Q21102920 Q21102965 Q21102964 Q21102949 Q21102966 Q21102961 Q21102930 Q21102963 Q21102962 Q21102921 Q21102987 Q21102922 Q21102925 Q21102924 Q21102927 Q21102928 Q21102974 Q21102989 Q21079490 Q21079491 Q21102985 Q21102984 Q21102983 Q21102982 Q21102981 Q21102980 Q21102973 Q21102969 Q21102944 Q21102968 Q21102954 Q21102955 Q21102956 Q21102957 Q21102950 Q21102951 Q21102978 Q21102953 Q21102976 Q21102977 Q21102975 Q21102972 Q21102959 Q21102970 Q21102971 Q21064863 Q21064832 Q21102931 Q21102948 Q21102937 Q21102934 Q21102979 Q21079559 Q21102938 Q21102939 Q21102967
(c(Q863908)|c(Q181394),P703,c(Q631147))
action count
action less
action union
action find_reverse_tuple_counts
relation P703
type Q631147
type Q863908
action find_reverse_tuple_counts
relation P703
type Q631147
type Q181394
action count
action filter_multi_types
action find_reverse
entity Q27510868
relation P703
type Q863908
type Q181394
[ANSWER]
[[{'concept': 'Q863908'}, {'concept': 'Q181394'}], 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?k ) WHERE { { SELECT DISTINCT ?n ( COUNT ( ?q ) AS ?j ) WHERE { { ?q property:P703 ?n . ?n rdf:type ontology:Q631147 . ?q rdf:type ontology:Q863908 } UNION { ?q property:P703 ?n . ?n rdf:type ontology:Q631147 . ?q rdf:type ontology:Q181394 } } GROUP BY ?n } . { SELECT DISTINCT ( COUNT ( ?s ) AS ?u ) WHERE { ?s property:P703 resource:Q27510868 . { VALUES ( ?o ) { ( ontology:Q181394 ) ( ontology:Q863908 ) } . ?s rdf:type ?o } } } . FILTER ( ?j < ?u ) }
Mycoplasma pneumoniae M129 Thermotoga maritima MSB8 Gardnerella vaginalis ATCC 14019 Burkholderia mallei ATCC 23344 Streptococcus mitis B6 Burkholderia pseudomallei K96243 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Salmonella enterica subsp. enterica serovar Typhi str. CT18 Geobacter sulfurreducens PCA Streptococcus suis BM407 Leptospira interrogans serovar Lai str. 56601 Pseudomonas putida KT2440 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 Yersinia pestis CO92 Yersinia enterocolitica subsp. enterocolitica 8081 Shigella flexneri 2a str. 301 Shigella dysenteriae Sd197 Vibrio parahaemolyticus RIMD 2210633 Vibrio fischeri ES114 Acinetobacter pittii PHEA-2 Enterococcus faecalis V583 Streptococcus pyogenes M1 GAS Rickettsia prowazekii str. Madrid E Enterococcus faecium DO Streptococcus mutans UA159 Escherichia coli O157:H7 str. Sakai Streptococcus pneumoniae R6 Streptococcus agalactiae 2603V/R Neisseria gonorrhoeae FA 1090 Mycobacterium tuberculosis H37Rv Neisseria meningitidis MC58 Bordetella pertussis Tohama I Bordetella bronchiseptica 253 Enterobacter aerogenes KCTC 2190 Enterobacter cloacae subsp. cloacae ATCC 13047 Clostridium botulinum A str. Hall Mycoplasma mycoides subsp. mycoides SC str. PG1 Pseudomonas syringae pv. syringae B728a Xanthomonas campestris pv. campestris str. ATCC 33913 Mycobacterium leprae TN Mycobacterium bovis AF2122/97 Corynebacterium glutamicum ATCC 13032 Bifidobacterium bifidum PRL2010 Listeria monocytogenes EGD-e Lactobacillus salivarius UCC118 Clostridium acetobutylicum ATCC 824 Bacillus anthracis str. Sterne Aeromonas hydrophila subsp. hydrophila ATCC 7966 Bacillus anthracis str. Ames Rhodospirillum rubrum ATCC 11170 Chloroflexus aurantiacus J-10-fl Staphylococcus aureus subsp. aureus NCTC 8325 Staphylococcus epidermidis ATCC 12228 Bacteroides fragilis YCH46 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 Lactobacillus casei ATCC 334 Rhodobacter sphaeroides 2.4.1 Peptoclostridium difficile 630 Lactobacillus acidophilus NCFM Clostridium botulinum A str. ATCC 3502 Bacillus thuringiensis serovar konkukian str. 97-27 Deinococcus radiodurans R1 Bacillus cereus ATCC 14579 Bacillus subtilis subsp. subtilis str. 168 Bordetella parapertussis Bpp5 Coxiella burnetii RSA 493 Escherichia coli UMN026 Haemophilus influenzae Rd KW20 Escherichia coli O104:H4 str. 2011C-3493 Escherichia coli O83:H1 str. NRG 857C Lactobacillus plantarum WCFS1 Salinibacter ruber DSM 13855 Escherichia coli str. K-12 substr. MG1655 Klebsiella pneumoniae subsp. pneumoniae HS11286 Lactococcus lactis subsp. lactis Il1403
75
action count
action less
action union
action find_reverse_tuple_counts
relation found in taxon
type infraspecific name
type nucleic acid sequence
action find_reverse_tuple_counts
relation found in taxon
type infraspecific name
type nutrient
action count
action filter_multi_types
action find_reverse
entity Saccharomyces cerevisiae S288c
relation found in taxon
type nucleic acid sequence
type nutrient
[[{'concept': 'nucleic acid sequence'}, {'concept': 'nutrient'}], 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?k ) WHERE { { SELECT DISTINCT ?n ( COUNT ( ?q ) AS ?j ) WHERE { { ?q property:found_in_taxon ?n . ?n rdf:type ontology:infraspecific_name . ?q rdf:type ontology:nucleic_acid_sequence } UNION { ?q property:found_in_taxon ?n . ?n rdf:type ontology:infraspecific_name . ?q rdf:type ontology:nutrient } } GROUP BY ?n } . { SELECT DISTINCT ( COUNT ( ?s ) AS ?u ) WHERE { ?s property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c . { VALUES ( ?o ) { ( ontology:nutrient ) ( ontology:nucleic_acid_sequence ) } . ?s rdf:type ?o } } } . FILTER ( ?j < ?u ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27550981
P680
Q44424
USER
Which the chemical bonds that represents the molecular function of cytochrome c oxidase subunit 1 Q0045 ?
(Q27550981,P680,c(Q44424))
action filter_type
action find
entity Q27550981
relation P680
type Q44424
['Q27550981', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?u WHERE { resource:Q27550981 property:P680 ?u . ?u rdf:type ontology:Q44424 }
cytochrome c oxidase subunit 1 Q0045
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation molecular function
type chemical bond
['cytochrome c oxidase subunit 1 Q0045', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?u WHERE { resource:cytochrome_c_oxidase_subunit_1_Q0045 property:molecular_function ?u . ?u rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380 Q14358439
SYSTEM
metal ion binding, iron ion binding
Q13667380 Q14358439
(Q27550981,P680,c(Q44424))
action filter_type
action find
entity Q27550981
relation P680
type Q44424
Represents the [ANSWERS]
['Q27550981', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?u WHERE { resource:Q27550981 property:P680 ?u . ?u rdf:type ontology:Q44424 }
metal ion binding iron ion binding
Represents the metal ion binding and iron ion binding
metal ion binding iron ion binding
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation molecular function
type chemical bond
['cytochrome c oxidase subunit 1 Q0045', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?u WHERE { resource:cytochrome_c_oxidase_subunit_1_Q0045 property:molecular_function ?u . ?u rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27543918
P688
Q181394
USER
What is the nutrient encoded by cytochrome c oxidase subunit 1 Q0045 ?
(Q27543918,P688,c(Q181394))
action filter_type
action find
entity Q27543918
relation P688
type Q181394
['Q27543918', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q181394 . resource:Q27543918 property:P688 ?c }
cytochrome c oxidase subunit 1 Q0045
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation encodes
type nutrient
['cytochrome c oxidase subunit 1 Q0045', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:nutrient . resource:cytochrome_c_oxidase_subunit_1_Q0045 property:encodes ?c }
[]
nutrient
Q27550981
SYSTEM
cytochrome c oxidase subunit 1 Q0045
Q27550981
(Q27543918,P688,c(Q181394))
action filter_type
action find
entity Q27543918
relation P688
type Q181394
The nutrient encoded by [ANSWER] is in [ANSWER]
['Q27543918', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q181394 . resource:Q27543918 property:P688 ?c }
cytochrome c oxidase subunit 1 Q0045
The nutrient encoded by cytochrome c oxidase subunit 1 Q0045 is in cytochrome c oxidase subunit 1 Q0045
cytochrome c oxidase subunit 1 Q0045
action filter_type
action find
entity cytochrome c oxidase subunit 1 Q0045
relation encodes
type nutrient
['cytochrome c oxidase subunit 1 Q0045', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:nutrient . resource:cytochrome_c_oxidase_subunit_1_Q0045 property:encodes ?c }
[]