Simple Question (Direct)
Simple Question
Q21122937
P702
Q863908
USER
Which nucleic acid sequence encodes V-type proton ATPase 116 kDa subunit a isoform 3 ?
(Q21122937,P702,c(Q863908))
action filter_type
action find
entity Q21122937
relation P702
type Q863908
['Q21122937', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q21122937 property:P702 ?n . ?n rdf:type ontology:Q863908 }
V-type proton ATPase 116 kDa subunit a isoform 3
action filter_type
action find
entity V-type proton ATPase 116 kDa subunit a isoform 3
relation encoded by
type nucleic acid sequence
['V-type proton ATPase 116 kDa subunit a isoform 3', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:V-type_proton_ATPase_116_kDa_subunit_a_isoform_3 property:encoded_by ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18035285
SYSTEM
TCIRG1
Q18035285
(Q21122937,P702,c(Q863908))
action filter_type
action find
entity Q21122937
relation P702
type Q863908
[ANSWER] encodes V-type proton ATPase 116 kDa subunit a isoform 3
['Q21122937', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q21122937 property:P702 ?n . ?n rdf:type ontology:Q863908 }
TCIRG1
TCIRG1 encodes V-type proton ATPase 116 kDa subunit a isoform 3
TCIRG1
action filter_type
action find
entity V-type proton ATPase 116 kDa subunit a isoform 3
relation encoded by
type nucleic acid sequence
['V-type proton ATPase 116 kDa subunit a isoform 3', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:V-type_proton_ATPase_116_kDa_subunit_a_isoform_3 property:encoded_by ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21122937
P688
Q863908
USER
Which nucleic acid sequence encodes V-type proton ATPase 116 kDa subunit a isoform 3 ?
(c(Q863908),P688,Q21122937)
action filter_type
action find_reverse
entity Q21122937
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21122937']
SELECT DISTINCT ?n WHERE { ?n property:P688 resource:Q21122937 . ?n rdf:type ontology:Q863908 }
V-type proton ATPase 116 kDa subunit a isoform 3
action filter_type
action find_reverse
entity V-type proton ATPase 116 kDa subunit a isoform 3
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'V-type proton ATPase 116 kDa subunit a isoform 3']
SELECT DISTINCT ?n WHERE { ?n property:encodes resource:V-type_proton_ATPase_116_kDa_subunit_a_isoform_3 . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18035285
SYSTEM
TCIRG1
Q18035285
(c(Q863908),P688,Q21122937)
action filter_type
action find_reverse
entity Q21122937
relation P688
type Q863908
[ANSWER] encodes V-type proton ATPase 116 kDa subunit a isoform 3
[{'concept': 'Q863908'}, 'P688', 'Q21122937']
SELECT DISTINCT ?n WHERE { ?n property:P688 resource:Q21122937 . ?n rdf:type ontology:Q863908 }
TCIRG1
TCIRG1 encodes V-type proton ATPase 116 kDa subunit a isoform 3
TCIRG1
action filter_type
action find_reverse
entity V-type proton ATPase 116 kDa subunit a isoform 3
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'V-type proton ATPase 116 kDa subunit a isoform 3']
SELECT DISTINCT ?n WHERE { ?n property:encodes resource:V-type_proton_ATPase_116_kDa_subunit_a_isoform_3 . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q18035285
P688
Q181394
USER
How many nutrients are TCIRG1 an encoding of ?
(Q18035285,P688,c(Q181394))
action count
action filter_type
action find
entity Q18035285
relation P688
type Q181394
['Q18035285', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?v ) WHERE { resource:Q18035285 property:P688 ?j . ?j rdf:type ontology:Q181394 }
TCIRG1
action count
action filter_type
action find
entity TCIRG1
relation encodes
type nutrient
['TCIRG1', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?v ) WHERE { resource:TCIRG1 property:encodes ?j . ?j rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
2
Q21122937 Q21137636
(Q18035285,P688,c(Q181394))
action count
action filter_type
action find
entity Q18035285
relation P688
type Q181394
[ANSWER]
['Q18035285', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?v ) WHERE { resource:Q18035285 property:P688 ?j . ?j rdf:type ontology:Q181394 }
V-type proton ATPase 116 kDa subunit a isoform 3 V-type proton ATPase subunit a
2
action count
action filter_type
action find
entity TCIRG1
relation encodes
type nutrient
['TCIRG1', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?v ) WHERE { resource:TCIRG1 property:encodes ?j . ?j rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q18303721
P688
Q181394
USER
And also tell me about Prdm14?
(Q18303721,P688,c(Q181394))
action count
action filter_type
action find
entity Q18303721
relation P688
type Q181394
['Q18303721', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?p ) WHERE { resource:Q18303721 property:P688 ?b . ?b rdf:type ontology:Q181394 }
Prdm14
action count
action filter_type
action find
entity Prdm14
relation encodes
type nutrient
['Prdm14', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?p ) WHERE { resource:Prdm14 property:encodes ?b . ?b rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q21496753
(Q18303721,P688,c(Q181394))
action count
action filter_type
action find
entity Q18303721
relation P688
type Q181394
[ANSWER]
['Q18303721', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?p ) WHERE { resource:Q18303721 property:P688 ?b . ?b rdf:type ontology:Q181394 }
PR domain zinc finger protein 14
1
action count
action filter_type
action find
entity Prdm14
relation encodes
type nutrient
['Prdm14', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?p ) WHERE { resource:Prdm14 property:encodes ?b . ?b rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q23392845
Q181394
USER
And what about uridylate kinase    Caur_3567?
(Q23392845,P688,c(Q181394))
action count
action filter_type
action find
entity Q23392845
relation P688
type Q181394
['Q23392845', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?b ) WHERE { resource:Q23392845 property:P688 ?s . ?s rdf:type ontology:Q181394 }
uridylate kinase    Caur_3567
action count
action filter_type
action find
entity uridylate kinase    Caur_3567
relation encodes
type nutrient
['uridylate kinase    Caur_3567', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?b ) WHERE { resource:uridylate_kinase____Caur_3567 property:encodes ?s . ?s rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
(Q23392845,P688,c(Q181394))
action count
action filter_type
action find
entity Q23392845
relation P688
type Q181394
[ANSWER]
['Q23392845', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?b ) WHERE { resource:Q23392845 property:P688 ?s . ?s rdf:type ontology:Q181394 }
1
action count
action filter_type
action find
entity uridylate kinase    Caur_3567
relation encodes
type nutrient
['uridylate kinase    Caur_3567', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?b ) WHERE { resource:uridylate_kinase____Caur_3567 property:encodes ?s . ?s rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q8386 Q79529 Q181394
USER
Which nutrients interacts with atleast 80 drugs or chemical substances ?
(c(Q181394),P129,c(Q8386)|c(Q79529))
action atleast
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q79529
value 80
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q79529'}]]
SELECT DISTINCT ?v WHERE { { SELECT DISTINCT ( COUNT ( ?h ) AS ?p ) ?v WHERE { { ?v property:P129 ?h . ?v rdf:type ontology:Q181394 . ?h rdf:type ontology:Q8386 } UNION { ?v property:P129 ?h . ?v rdf:type ontology:Q181394 . ?h rdf:type ontology:Q79529 } } GROUP BY ?v } . FILTER ( ?p >= 80 ) }
action atleast
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 80
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'chemical substance'}]]
SELECT DISTINCT ?v WHERE { { SELECT DISTINCT ( COUNT ( ?h ) AS ?p ) ?v WHERE { { ?v property:physically_interacts_with ?h . ?v rdf:type ontology:nutrient . ?h rdf:type ontology:drug } UNION { ?v property:physically_interacts_with ?h . ?v rdf:type ontology:nutrient . ?h rdf:type ontology:chemical_substance } } GROUP BY ?v } . FILTER ( ?p >= 80 ) }
[]
drug chemical substance nutrient
Q21115043 Q1949517
SYSTEM
5-hydroxytryptamine receptor 1A, 5-hydroxytryptamine receptor 2A
Q21115043 Q1949517
(c(Q181394),P129,c(Q8386)|c(Q79529))
action atleast
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q79529
value 80
[ANSWERS] interact with atleast 80 drugs or chemical substances
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q79529'}]]
SELECT DISTINCT ?v WHERE { { SELECT DISTINCT ( COUNT ( ?h ) AS ?p ) ?v WHERE { { ?v property:P129 ?h . ?v rdf:type ontology:Q181394 . ?h rdf:type ontology:Q8386 } UNION { ?v property:P129 ?h . ?v rdf:type ontology:Q181394 . ?h rdf:type ontology:Q79529 } } GROUP BY ?v } . FILTER ( ?p >= 80 ) }
5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A
5-hydroxytryptamine receptor 1A and 5-hydroxytryptamine receptor 2A interact with atleast 80 drugs or chemical substances
5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A
action atleast
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 80
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'chemical substance'}]]
SELECT DISTINCT ?v WHERE { { SELECT DISTINCT ( COUNT ( ?h ) AS ?p ) ?v WHERE { { ?v property:physically_interacts_with ?h . ?v rdf:type ontology:nutrient . ?h rdf:type ontology:drug } UNION { ?v property:physically_interacts_with ?h . ?v rdf:type ontology:nutrient . ?h rdf:type ontology:chemical_substance } } GROUP BY ?v } . FILTER ( ?p >= 80 ) }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q424446
P129
Q8386
USER
Does lisuride interact with those nutrients ?
(Q424446,P129,Q21115043) (Q424446,P129,Q1949517)
action is_in
entity prev_answer
action find
entity Q424446
relation P129
['Q424446', 'P129', 'Q21115043'] ['Q424446', 'P129', 'Q1949517']
ASK WHERE { VALUES ( ?q ) { ( resource:Q21115043 ) ( resource:Q1949517 ) } . resource:Q424446 property:P129 ?q }
lisuride
action is_in
entity prev_answer
action find
entity lisuride
relation physically interacts with
['lisuride', 'physically interacts with', '5-hydroxytryptamine receptor 1A'] ['lisuride', 'physically interacts with', '5-hydroxytryptamine receptor 2A']
ASK WHERE { VALUES ( ?q ) { ( resource:5-hydroxytryptamine_receptor_1A ) ( resource:5-hydroxytryptamine_receptor_2A ) } . resource:lisuride property:physically_interacts_with ?q }
[]
drug
SYSTEM
YES
(Q424446,P129,Q21115043) (Q424446,P129,Q1949517)
action is_in
entity prev_answer
action find
entity Q424446
relation P129
[ANSWER]
['Q424446', 'P129', 'Q21115043'] ['Q424446', 'P129', 'Q1949517']
ASK WHERE { VALUES ( ?q ) { ( resource:Q21115043 ) ( resource:Q1949517 ) } . resource:Q424446 property:P129 ?q }
Yes
action is_in
entity prev_answer
action find
entity lisuride
relation physically interacts with
['lisuride', 'physically interacts with', '5-hydroxytryptamine receptor 1A'] ['lisuride', 'physically interacts with', '5-hydroxytryptamine receptor 2A']
ASK WHERE { VALUES ( ?q ) { ( resource:5-hydroxytryptamine_receptor_1A ) ( resource:5-hydroxytryptamine_receptor_2A ) } . resource:lisuride property:physically_interacts_with ?q }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q21122937 Q21116899 Q22327083
P681
Q5058355
USER
Is complement component C1 complex and PTEN phosphatase complex a cell component of V-type proton ATPase 116 kDa subunit a isoform 3 ?
(Q21122937,P681,Q21116899) (Q21122937,P681,Q22327083)
action is_in
entity Q21122937
action intersection
action find_reverse
entity Q21116899
relation P681
action find_reverse
entity Q22327083
relation P681
['Q21122937', 'P681', 'Q21116899'] ['Q21122937', 'P681', 'Q22327083']
ASK WHERE { resource:Q21122937 property:P681 resource:Q21116899 . resource:Q21122937 property:P681 resource:Q22327083 }
V-type proton ATPase 116 kDa subunit a isoform 3 complement component C1 complex PTEN phosphatase complex
action is_in
entity V-type proton ATPase 116 kDa subunit a isoform 3
action intersection
action find_reverse
entity complement component C1 complex
relation cell component
action find_reverse
entity PTEN phosphatase complex
relation cell component
['V-type proton ATPase 116 kDa subunit a isoform 3', 'cell component', 'complement component C1 complex'] ['V-type proton ATPase 116 kDa subunit a isoform 3', 'cell component', 'PTEN phosphatase complex']
ASK WHERE { resource:V-type_proton_ATPase_116_kDa_subunit_a_isoform_3 property:cell_component resource:complement_component_C1_complex . resource:V-type_proton_ATPase_116_kDa_subunit_a_isoform_3 property:cell_component resource:PTEN_phosphatase_complex }
[]
cellular component
SYSTEM
NO
(Q21122937,P681,Q21116899) (Q21122937,P681,Q22327083)
action is_in
entity Q21122937
action intersection
action find_reverse
entity Q21116899
relation P681
action find_reverse
entity Q22327083
relation P681
[ANSWER]
['Q21122937', 'P681', 'Q21116899'] ['Q21122937', 'P681', 'Q22327083']
ASK WHERE { resource:Q21122937 property:P681 resource:Q21116899 . resource:Q21122937 property:P681 resource:Q22327083 }
No
action is_in
entity V-type proton ATPase 116 kDa subunit a isoform 3
action intersection
action find_reverse
entity complement component C1 complex
relation cell component
action find_reverse
entity PTEN phosphatase complex
relation cell component
['V-type proton ATPase 116 kDa subunit a isoform 3', 'cell component', 'complement component C1 complex'] ['V-type proton ATPase 116 kDa subunit a isoform 3', 'cell component', 'PTEN phosphatase complex']
ASK WHERE { resource:V-type_proton_ATPase_116_kDa_subunit_a_isoform_3 property:cell_component resource:complement_component_C1_complex . resource:V-type_proton_ATPase_116_kDa_subunit_a_isoform_3 property:cell_component resource:PTEN_phosphatase_complex }
[]