Simple Question (Direct)
Simple Question
Q22272512
P682
Q2996394
USER
What is the biological process that aromatic amino acid aminotransferase    NMB0540 is involved in ?
(Q22272512,P682,c(Q2996394))
action filter_type
action find
entity Q22272512
relation P682
type Q2996394
['Q22272512', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?f WHERE { resource:Q22272512 property:P682 ?f . ?f rdf:type ontology:Q2996394 }
aromatic amino acid aminotransferase    NMB0540
action filter_type
action find
entity aromatic amino acid aminotransferase    NMB0540
relation biological process
type biological process
['aromatic amino acid aminotransferase    NMB0540', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?f WHERE { resource:aromatic_amino_acid_aminotransferase____NMB0540 property:biological_process ?f . ?f rdf:type ontology:biological_process }
[]
biological process
Q14914008
SYSTEM
biosynthetic process
Q14914008
(Q22272512,P682,c(Q2996394))
action filter_type
action find
entity Q22272512
relation P682
type Q2996394
The biological process that aromatic amino acid aminotransferase NMB 0540 is involved in is a [ANSWER]
['Q22272512', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?f WHERE { resource:Q22272512 property:P682 ?f . ?f rdf:type ontology:Q2996394 }
biosynthetic process
The biological process that aromatic amino acid aminotransferase NMB 0540 is involved in is a biosynthetic process
biosynthetic process
action filter_type
action find
entity aromatic amino acid aminotransferase    NMB0540
relation biological process
type biological process
['aromatic amino acid aminotransferase    NMB0540', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?f WHERE { resource:aromatic_amino_acid_aminotransferase____NMB0540 property:biological_process ?f . ?f rdf:type ontology:biological_process }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q22272512
P702
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(Q14914008,P702,c(Q863908))
action filter_type
action find
entity Q22272512
relation P702
type Q863908
['Q14914008', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q22272512 property:P702 ?c . ?c rdf:type ontology:Q863908 }
aromatic amino acid aminotransferase    NMB0540
action filter_type
action find
entity aromatic amino acid aminotransferase    NMB0540
relation encoded by
type nucleic acid sequence
['biosynthetic process', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:aromatic_amino_acid_aminotransferase____NMB0540 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q22268746
SYSTEM
aromatic amino acid aminotransferase    NMB0540
Q22268746
(Q14914008,P702,c(Q863908))
action filter_type
action find
entity Q22272512
relation P702
type Q863908
Aromatic amino acid aminotransferase NMB0540 encodes that nutrient
['Q14914008', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q22272512 property:P702 ?c . ?c rdf:type ontology:Q863908 }
aromatic amino acid aminotransferase    NMB0540
Aromatic amino acid aminotransferase NMB0540 encodes that nutrient
aromatic amino acid aminotransferase    NMB0540
action filter_type
action find
entity aromatic amino acid aminotransferase    NMB0540
relation encoded by
type nucleic acid sequence
['biosynthetic process', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:aromatic_amino_acid_aminotransferase____NMB0540 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q22294647
P361
Q5962346 Q151885 Q2996394
USER
Which biological processes are a portion of around the same number of classification schemes or concepts as female germline ring canal formation, actin assembly ?
(c(Q2996394),P361,c(Q5962346)|c(Q151885))
action approx
action union
action find_tuple_counts
relation P361
type Q2996394
type Q5962346
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action count
action filter_multi_types
action find
entity Q22294647
relation P361
type Q5962346
type Q151885
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q5962346'}, {'concept': 'Q151885'}]]
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ?s ( COUNT ( ?h ) AS ?j ) WHERE { { ?s property:P361 ?h . ?s rdf:type ontology:Q2996394 . ?h rdf:type ontology:Q5962346 } UNION { ?s property:P361 ?h . ?s rdf:type ontology:Q2996394 . ?h rdf:type ontology:Q151885 } } GROUP BY ?s } . { SELECT DISTINCT ( COUNT ( ?c ) AS ?u ) WHERE { resource:Q22294647 property:P361 ?c . { ?c rdf:type ?b . VALUES ( ?b ) { ( ontology:Q5962346 ) ( ontology:Q151885 ) } } } } . FILTER ( ?j = ?u ) }
female germline ring canal formation, actin assembly
action approx
action union
action find_tuple_counts
relation part of
type biological process
type classification scheme
action find_tuple_counts
relation part of
type biological process
type concept
action count
action filter_multi_types
action find
entity female germline ring canal formation, actin assembly
relation part of
type classification scheme
type concept
[{'concept': 'biological process'}, 'part of', [{'concept': 'classification scheme'}, {'concept': 'concept'}]]
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ?s ( COUNT ( ?h ) AS ?j ) WHERE { { ?s property:part_of ?h . ?s rdf:type ontology:biological_process . ?h rdf:type ontology:classification_scheme } UNION { ?s property:part_of ?h . ?s rdf:type ontology:biological_process . ?h rdf:type ontology:concept } } GROUP BY ?s } . { SELECT DISTINCT ( COUNT ( ?c ) AS ?u ) WHERE { resource:female_germline_ring_canal_formation,_actin_assembly property:part_of ?c . { ?c rdf:type ?b . VALUES ( ?b ) { ( ontology:classification_scheme ) ( ontology:concept ) } } } } . FILTER ( ?j = ?u ) }
[]
classification scheme concept biological process
Q14877671 Q11995 Q22291145
SYSTEM
cartilage condensation, pregnancy, establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
Q22294591 Q22294593 Q22290970 Q22294595 Q22272234 Q14862258 Q24457453 Q14904219 Q83944 Q22289032 Q22271492 Q22271494 Q22294752 Q21368803 Q17342249 Q22294585 Q21122953 Q21104659 Q22294615 Q14860198 Q15325345 Q1115221 Q1759895 Q24459941 Q22291478 Q949618 Q14897640 Q21116174 Q14877671 Q21097540 Q14864099 Q21103041 Q21444598 Q21136671 Q22280551 Q21111890 Q22292538 Q14863654 Q22271536 Q22279989 Q27122058 Q14865397 Q22294630 Q14859996 Q14865659 Q14914558 Q22294730 Q21171796 Q22294732 Q22294734 Q22294736 Q22294738 Q22294637 Q22269960 Q21149516 Q22279515 Q22279517 Q22281166 Q11995 Q22284167 Q22289068 Q16007097 Q22279591 Q22289779 Q22294644 Q22294647 Q15320925 Q22291145 Q22294723 Q22311434 Q163261 Q22294726 Q614138 Q22294728 Q22294486 Q21127160 Q22269715 Q21750263 Q333666 Q22289309 Q22293217 Q22284494 Q22291156 Q22294650 Q21106668 Q22255228 Q22280424 Q14904764 Q21104990 Q14863664 Q22294461 Q22250139 Q21111494 Q22272687 Q17304930 Q22283440 Q22284328 Q21108938 Q14864210 Q22302766 Q21106018 Q22294463 Q14864899 Q22271479 Q14904772 Q14904771 Q14912956 Q22311529 Q22279704 Q22282635 Q21104832 Q22253821 Q21124921 Q22294678 Q22273805 Q22284232 Q21115753 Q24459846 Q14873676 Q22269557 Q21104842 Q21132115 Q21114820 Q22253568 Q22272875
(c(Q2996394),P361,c(Q5962346)|c(Q151885))
action approx
action union
action find_tuple_counts
relation P361
type Q2996394
type Q5962346
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action count
action filter_multi_types
action find
entity Q22294647
relation P361
type Q5962346
type Q151885
[ANSWERS] are a portion of around the same number of classification schemes or concepts as female germline ring canal formation, actin assembly
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q5962346'}, {'concept': 'Q151885'}]]
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ?s ( COUNT ( ?h ) AS ?j ) WHERE { { ?s property:P361 ?h . ?s rdf:type ontology:Q2996394 . ?h rdf:type ontology:Q5962346 } UNION { ?s property:P361 ?h . ?s rdf:type ontology:Q2996394 . ?h rdf:type ontology:Q151885 } } GROUP BY ?s } . { SELECT DISTINCT ( COUNT ( ?c ) AS ?u ) WHERE { resource:Q22294647 property:P361 ?c . { ?c rdf:type ?b . VALUES ( ?b ) { ( ontology:Q5962346 ) ( ontology:Q151885 ) } } } } . FILTER ( ?j = ?u ) }
mitotic cell cycle arrest in response to pheromone cell wall organization involved in conjugation with cellular fusion protein localization to meiotic spindle pole body reproductive behavior detection of stimulus involved in meiotic cell cycle checkpoint dopamine uptake involved in synaptic transmission induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration developmental process involved in reproduction human evolution actomyosin contractile ring localization detoxification of zinc ion detoxification of arsenic-containing substance modification of morphology or physiology of other organism watercraft rowing Ethical attitude adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion male pronucleus assembly detoxification of nitrogen compound luteinizing hormone signaling pathway involved in ovarian follicle development anatomical structure formation involved in morphogenesis pronuclear fusion mores coping manchette assembly pole plasm protein localization Taxis synaptic vesicle docking synaptic vesicle targeting cartilage condensation DNA methylation involved in gamete generation ovulation cycle process protein unfolding positive regulation of flagellated sperm motility involved in capacitation female pronucleus assembly gene conversion at mating-type locus, termination of copy-synthesis synaptic vesicle priming cytoplasmic transport, nurse cell to oocyte multicellular organismal reproductive process response to pheromone involved in conjugation with cellular fusion gene conversion at mating-type locus, DNA double-strand break processing synaptic vesicle tethering involved in synaptic vesicle exocytosis T cell selection fusome organization mesenchymal smoothened signaling pathway involved in prostate gland development tolerance induction nitrogen compound metabolic process karyogamy involved in conjugation with cellular fusion nitric oxide storage maintenance of floral organ identity negative regulation of progesterone biosynthesis involved in luteolysis transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission cell adhesion involved in prostatic bud elongation karyosome formation pollen tube guidance organic substance metabolic process gene conversion at mating-type locus heteroduplex formation involved in gene conversion at mating-type locus gene conversion at mating-type locus, DNA double-strand break formation pregnancy peptidyl-serine phosphorylation involved in acrosome reaction pole plasm RNA localization habit strand invasion involved in gene conversion at mating-type locus bicoid mRNA localization Wnt signaling pathway involved in animal/vegetal axis specification female germline ring canal formation, actin assembly locomotion involved in locomotory behavior establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification nurse cell nucleus anchoring B cell selection acrosome reaction DNA recombinase assembly involved in gene conversion at mating-type locus vital function seed oilbody biogenesis signal transduction involved in meiotic cell cycle checkpoint fertilization, exchange of chromosomal proteins budding cell bud growth FtsZ-dependent cytokinesis abscission oocyte nucleus localization involved in oocyte dorsal/ventral axis specification oocyte localization involved in germarium-derived egg chamber formation reproductive process in single-celled organism pronuclear migration generative cell mitosis synaptic vesicle fusion to presynaptic active zone membrane regulation of transcription from RNA polymerase II promoter involved in spermatogenesis somatic diversification of immune receptors primary ovarian follicle growth spermatid nucleus differentiation neurotransmitter secretion border follicle cell delamination meiotic cell cycle process activation of meiosis involved in egg activation response to stimulus involved in regulation of muscle adaptation cell cycle process mucilage metabolic process involved in seed coat development peptide mating pheromone maturation involved in conjugation with cellular fusion preantral ovarian follicle growth anatomical structure morphogenesis calcium-dependent activation of synaptic vesicle fusion cell separation after cytokinesis sperm chromatin decondensation acrosome matrix dispersal mycothiol-dependent detoxification spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation ovarian cumulus expansion antigen sampling in mucosal-associated lymphoid tissue gene conversion at mating-type locus, DNA repair synthesis cell wall macromolecule catabolic process involved in cytogamy synaptic vesicle exocytosis regulation of transcription involved in meiotic cell cycle P granule organization secondary cell wall biogenesis involved in seed trichome differentiation photoperiodism, flowering signal transduction involved in conjugation with cellular fusion behavioral response to nutrient intermicrovillar adhesion cell motility uterine wall growth chromosome localization to nuclear envelope involved in homologous chromosome segregation prevention of polyspermy spermatid nucleus elongation positive regulation of transcription involved in egg activation detection of stimulus involved in meiotic spindle checkpoint
Cartilage condensation, pregnancy and establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification are a portion of around the same number of classification schemes or concepts as female germline ring canal formation, actin assembly
cartilage condensation pregnancy establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
action approx
action union
action find_tuple_counts
relation part of
type biological process
type classification scheme
action find_tuple_counts
relation part of
type biological process
type concept
action count
action filter_multi_types
action find
entity female germline ring canal formation, actin assembly
relation part of
type classification scheme
type concept
[{'concept': 'biological process'}, 'part of', [{'concept': 'classification scheme'}, {'concept': 'concept'}]]
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ?s ( COUNT ( ?h ) AS ?j ) WHERE { { ?s property:part_of ?h . ?s rdf:type ontology:biological_process . ?h rdf:type ontology:classification_scheme } UNION { ?s property:part_of ?h . ?s rdf:type ontology:biological_process . ?h rdf:type ontology:concept } } GROUP BY ?s } . { SELECT DISTINCT ( COUNT ( ?c ) AS ?u ) WHERE { resource:female_germline_ring_canal_formation,_actin_assembly property:part_of ?c . { ?c rdf:type ?b . VALUES ( ?b ) { ( ontology:classification_scheme ) ( ontology:concept ) } } } } . FILTER ( ?j = ?u ) }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type|Incomplete
Q21132115
P361
Q5962346 Q151885 Q2996394
USER
And what about prevention of polyspermy?
(c(Q2996394),P361,c(Q5962346)|c(Q151885))
action approx
action union
action find_tuple_counts
relation P361
type Q2996394
type Q5962346
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action count
action filter_multi_types
action find
entity Q21132115
relation P361
type Q5962346
type Q151885
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q5962346'}, {'concept': 'Q151885'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?l ) AS ?x ) ?i WHERE { VALUES ( ?s ) { ( ontology:Q5962346 ) ( ontology:Q151885 ) } . ?l rdf:type ?s } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?d ) AS ?g ) WHERE { resource:Q21132115 property:P361 ?d . { { ?d rdf:type ontology:Q151885 } UNION { ?d rdf:type ontology:Q5962346 } } } } . FILTER ( ?x = ?g ) }
prevention of polyspermy
action approx
action union
action find_tuple_counts
relation part of
type biological process
type classification scheme
action find_tuple_counts
relation part of
type biological process
type concept
action count
action filter_multi_types
action find
entity prevention of polyspermy
relation part of
type classification scheme
type concept
[{'concept': 'biological process'}, 'part of', [{'concept': 'classification scheme'}, {'concept': 'concept'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?l ) AS ?x ) ?i WHERE { VALUES ( ?s ) { ( ontology:classification_scheme ) ( ontology:concept ) } . ?l rdf:type ?s } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?d ) AS ?g ) WHERE { resource:prevention_of_polyspermy property:part_of ?d . { { ?d rdf:type ontology:concept } UNION { ?d rdf:type ontology:classification_scheme } } } } . FILTER ( ?x = ?g ) }
[]
classification scheme concept biological process
Q14877671 Q11995 Q22291145
SYSTEM
cartilage condensation, pregnancy, establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
Q22294591 Q22294593 Q22290970 Q22294595 Q22272234 Q14862258 Q24457453 Q14904219 Q83944 Q22289032 Q22271492 Q22271494 Q22294752 Q21368803 Q17342249 Q22294585 Q21122953 Q21104659 Q22294615 Q14860198 Q15325345 Q1115221 Q1759895 Q24459941 Q22291478 Q949618 Q14897640 Q21116174 Q14877671 Q21097540 Q14864099 Q21103041 Q21444598 Q21136671 Q22280551 Q21111890 Q22292538 Q14863654 Q22271536 Q22279989 Q27122058 Q14865397 Q22294630 Q14859996 Q14865659 Q14914558 Q22294730 Q21171796 Q22294732 Q22294734 Q22294736 Q22294738 Q22294637 Q22269960 Q21149516 Q22279515 Q22279517 Q22281166 Q11995 Q22284167 Q22289068 Q16007097 Q22279591 Q22289779 Q22294644 Q22294647 Q15320925 Q22291145 Q22294723 Q22311434 Q163261 Q22294726 Q614138 Q22294728 Q22294486 Q21127160 Q22269715 Q21750263 Q333666 Q22289309 Q22293217 Q22284494 Q22291156 Q22294650 Q21106668 Q22255228 Q22280424 Q14904764 Q21104990 Q14863664 Q22294461 Q22250139 Q21111494 Q22272687 Q17304930 Q22283440 Q22284328 Q21108938 Q14864210 Q22302766 Q21106018 Q22294463 Q14864899 Q22271479 Q14904772 Q14904771 Q14912956 Q22311529 Q22279704 Q22282635 Q21104832 Q22253821 Q21124921 Q22294678 Q22273805 Q22284232 Q21115753 Q24459846 Q14873676 Q22269557 Q21104842 Q21132115 Q21114820 Q22253568 Q22272875
(c(Q2996394),P361,c(Q5962346)|c(Q151885))
action approx
action union
action find_tuple_counts
relation P361
type Q2996394
type Q5962346
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action count
action filter_multi_types
action find
entity Q21132115
relation P361
type Q5962346
type Q151885
[ANSWERS]
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q5962346'}, {'concept': 'Q151885'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?l ) AS ?x ) ?i WHERE { VALUES ( ?s ) { ( ontology:Q5962346 ) ( ontology:Q151885 ) } . ?l rdf:type ?s } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?d ) AS ?g ) WHERE { resource:Q21132115 property:P361 ?d . { { ?d rdf:type ontology:Q151885 } UNION { ?d rdf:type ontology:Q5962346 } } } } . FILTER ( ?x = ?g ) }
mitotic cell cycle arrest in response to pheromone cell wall organization involved in conjugation with cellular fusion protein localization to meiotic spindle pole body reproductive behavior detection of stimulus involved in meiotic cell cycle checkpoint dopamine uptake involved in synaptic transmission induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration developmental process involved in reproduction human evolution actomyosin contractile ring localization detoxification of zinc ion detoxification of arsenic-containing substance modification of morphology or physiology of other organism watercraft rowing Ethical attitude adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion male pronucleus assembly detoxification of nitrogen compound luteinizing hormone signaling pathway involved in ovarian follicle development anatomical structure formation involved in morphogenesis pronuclear fusion mores coping manchette assembly pole plasm protein localization Taxis synaptic vesicle docking synaptic vesicle targeting cartilage condensation DNA methylation involved in gamete generation ovulation cycle process protein unfolding positive regulation of flagellated sperm motility involved in capacitation female pronucleus assembly gene conversion at mating-type locus, termination of copy-synthesis synaptic vesicle priming cytoplasmic transport, nurse cell to oocyte multicellular organismal reproductive process response to pheromone involved in conjugation with cellular fusion gene conversion at mating-type locus, DNA double-strand break processing synaptic vesicle tethering involved in synaptic vesicle exocytosis T cell selection fusome organization mesenchymal smoothened signaling pathway involved in prostate gland development tolerance induction nitrogen compound metabolic process karyogamy involved in conjugation with cellular fusion nitric oxide storage maintenance of floral organ identity negative regulation of progesterone biosynthesis involved in luteolysis transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission cell adhesion involved in prostatic bud elongation karyosome formation pollen tube guidance organic substance metabolic process gene conversion at mating-type locus heteroduplex formation involved in gene conversion at mating-type locus gene conversion at mating-type locus, DNA double-strand break formation pregnancy peptidyl-serine phosphorylation involved in acrosome reaction pole plasm RNA localization habit strand invasion involved in gene conversion at mating-type locus bicoid mRNA localization Wnt signaling pathway involved in animal/vegetal axis specification female germline ring canal formation, actin assembly locomotion involved in locomotory behavior establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification nurse cell nucleus anchoring B cell selection acrosome reaction DNA recombinase assembly involved in gene conversion at mating-type locus vital function seed oilbody biogenesis signal transduction involved in meiotic cell cycle checkpoint fertilization, exchange of chromosomal proteins budding cell bud growth FtsZ-dependent cytokinesis abscission oocyte nucleus localization involved in oocyte dorsal/ventral axis specification oocyte localization involved in germarium-derived egg chamber formation reproductive process in single-celled organism pronuclear migration generative cell mitosis synaptic vesicle fusion to presynaptic active zone membrane regulation of transcription from RNA polymerase II promoter involved in spermatogenesis somatic diversification of immune receptors primary ovarian follicle growth spermatid nucleus differentiation neurotransmitter secretion border follicle cell delamination meiotic cell cycle process activation of meiosis involved in egg activation response to stimulus involved in regulation of muscle adaptation cell cycle process mucilage metabolic process involved in seed coat development peptide mating pheromone maturation involved in conjugation with cellular fusion preantral ovarian follicle growth anatomical structure morphogenesis calcium-dependent activation of synaptic vesicle fusion cell separation after cytokinesis sperm chromatin decondensation acrosome matrix dispersal mycothiol-dependent detoxification spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation ovarian cumulus expansion antigen sampling in mucosal-associated lymphoid tissue gene conversion at mating-type locus, DNA repair synthesis cell wall macromolecule catabolic process involved in cytogamy synaptic vesicle exocytosis regulation of transcription involved in meiotic cell cycle P granule organization secondary cell wall biogenesis involved in seed trichome differentiation photoperiodism, flowering signal transduction involved in conjugation with cellular fusion behavioral response to nutrient intermicrovillar adhesion cell motility uterine wall growth chromosome localization to nuclear envelope involved in homologous chromosome segregation prevention of polyspermy spermatid nucleus elongation positive regulation of transcription involved in egg activation detection of stimulus involved in meiotic spindle checkpoint
cartilage condensation pregnancy establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
action approx
action union
action find_tuple_counts
relation part of
type biological process
type classification scheme
action find_tuple_counts
relation part of
type biological process
type concept
action count
action filter_multi_types
action find
entity prevention of polyspermy
relation part of
type classification scheme
type concept
[{'concept': 'biological process'}, 'part of', [{'concept': 'classification scheme'}, {'concept': 'concept'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?l ) AS ?x ) ?i WHERE { VALUES ( ?s ) { ( ontology:classification_scheme ) ( ontology:concept ) } . ?l rdf:type ?s } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?d ) AS ?g ) WHERE { resource:prevention_of_polyspermy property:part_of ?d . { { ?d rdf:type ontology:concept } UNION { ?d rdf:type ontology:classification_scheme } } } } . FILTER ( ?x = ?g ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22268746
P688
Q181394
USER
Which nutrient is encoded by aromatic amino acid aminotransferase    NMB0540 ?
(Q22268746,P688,c(Q181394))
action filter_type
action find
entity Q22268746
relation P688
type Q181394
['Q22268746', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q181394 . resource:Q22268746 property:P688 ?t }
aromatic amino acid aminotransferase    NMB0540
action filter_type
action find
entity aromatic amino acid aminotransferase    NMB0540
relation encodes
type nutrient
['aromatic amino acid aminotransferase    NMB0540', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:nutrient . resource:aromatic_amino_acid_aminotransferase____NMB0540 property:encodes ?t }
[]
nutrient
Q22272512
SYSTEM
aromatic amino acid aminotransferase    NMB0540
Q22272512
(Q22268746,P688,c(Q181394))
action filter_type
action find
entity Q22268746
relation P688
type Q181394
Aromatic amino acid aminotransferase NMB0540 is encoded by aromatic amino acid aminotransferase NMB0540
['Q22268746', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q181394 . resource:Q22268746 property:P688 ?t }
aromatic amino acid aminotransferase    NMB0540
Aromatic amino acid aminotransferase NMB0540 is encoded by aromatic amino acid aminotransferase NMB0540
aromatic amino acid aminotransferase    NMB0540
action filter_type
action find
entity aromatic amino acid aminotransferase    NMB0540
relation encodes
type nutrient
['aromatic amino acid aminotransferase    NMB0540', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:nutrient . resource:aromatic_amino_acid_aminotransferase____NMB0540 property:encodes ?t }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23266012
Q181394
USER
And how about hypothetical protein    glr3379?
(Q23266012,P688,c(Q181394))
action filter_type
action find
entity Q23266012
relation P688
type Q181394
['Q23266012', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?e WHERE { resource:Q23266012 property:P688 ?e . ?e rdf:type ontology:Q181394 }
hypothetical protein    glr3379
action filter_type
action find
entity hypothetical protein    glr3379
relation encodes
type nutrient
['hypothetical protein    glr3379', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?e WHERE { resource:hypothetical_protein____glr3379 property:encodes ?e . ?e rdf:type ontology:nutrient }
[]
nutrient
Q23569655
SYSTEM
hypothetical protein    glr3379
Q23569655
(Q23266012,P688,c(Q181394))
action filter_type
action find
entity Q23266012
relation P688
type Q181394
[ANSWER]
['Q23266012', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?e WHERE { resource:Q23266012 property:P688 ?e . ?e rdf:type ontology:Q181394 }
hypothetical protein    glr3379
hypothetical protein    glr3379
action filter_type
action find
entity hypothetical protein    glr3379
relation encodes
type nutrient
['hypothetical protein    glr3379', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?e WHERE { resource:hypothetical_protein____glr3379 property:encodes ?e . ?e rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q27747710 Q22268746
P703
Q631147
USER
Which infraspecific names are the taxon to which aromatic amino acid aminotransferase    NMB0540 or amino acid permease    MSMEG_3557 belongs to ?
OR((Q22268746,P703,c(Q631147)), (Q27747710,P703,c(Q631147)))
action filter_type
action union
action find
entity Q22268746
relation P703
action find
entity Q27747710
relation P703
type Q631147
{'OR': [['Q22268746', 'P703', {'concept': 'Q631147'}], ['Q27747710', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?p WHERE { { VALUES ( ?q ) { ( resource:Q22268746 ) ( resource:Q27747710 ) } . ?q property:P703 ?p } . ?p rdf:type ontology:Q631147 }
amino acid permease    MSMEG_3557 aromatic amino acid aminotransferase    NMB0540
action filter_type
action union
action find
entity aromatic amino acid aminotransferase    NMB0540
relation found in taxon
action find
entity amino acid permease    MSMEG_3557
relation found in taxon
type infraspecific name
{'OR': [['aromatic amino acid aminotransferase    NMB0540', 'found in taxon', {'concept': 'infraspecific name'}], ['amino acid permease    MSMEG_3557', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?p WHERE { { VALUES ( ?q ) { ( resource:aromatic_amino_acid_aminotransferase____NMB0540 ) ( resource:amino_acid_permease____MSMEG_3557 ) } . ?q property:found_in_taxon ?p } . ?p rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102986 Q21102922
SYSTEM
Mycobacterium smegmatis str. MC2 155, Neisseria meningitidis MC58
Q21102986 Q21102922
OR((Q22268746,P703,c(Q631147)), (Q27747710,P703,c(Q631147)))
action filter_type
action union
action find
entity Q22268746
relation P703
action find
entity Q27747710
relation P703
type Q631147
[ANSWERS] are the taxon to which aromatic amino acid aminotransferase NMB0540 or amino acid permease MSMEG_3557 belongs to
{'OR': [['Q22268746', 'P703', {'concept': 'Q631147'}], ['Q27747710', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?p WHERE { { VALUES ( ?q ) { ( resource:Q22268746 ) ( resource:Q27747710 ) } . ?q property:P703 ?p } . ?p rdf:type ontology:Q631147 }
Mycobacterium smegmatis str. MC2 155 Neisseria meningitidis MC58
Mycobacterium smegmatis str. MC2 155 and Neisseria meningitidis MC58 are the taxon to which aromatic amino acid aminotransferase NMB0540 or amino acid permease MSMEG_3557 belongs to
Mycobacterium smegmatis str. MC2 155 Neisseria meningitidis MC58
action filter_type
action union
action find
entity aromatic amino acid aminotransferase    NMB0540
relation found in taxon
action find
entity amino acid permease    MSMEG_3557
relation found in taxon
type infraspecific name
{'OR': [['aromatic amino acid aminotransferase    NMB0540', 'found in taxon', {'concept': 'infraspecific name'}], ['amino acid permease    MSMEG_3557', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?p WHERE { { VALUES ( ?q ) { ( resource:aromatic_amino_acid_aminotransferase____NMB0540 ) ( resource:amino_acid_permease____MSMEG_3557 ) } . ?q property:found_in_taxon ?p } . ?p rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23420723 Q23569655
P688
Q863908
USER
Which nucleic acid sequences encodes hypothetical protein    glr3379 or hypothetical protein    SF4331 ?
OR((c(Q863908),P688,Q23569655), (c(Q863908),P688,Q23420723))
action filter_type
action union
action find_reverse
entity Q23569655
relation P688
action find_reverse
entity Q23420723
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q23569655'], [{'concept': 'Q863908'}, 'P688', 'Q23420723']]}
SELECT DISTINCT ?n WHERE { { { ?n property:P688 resource:Q23569655 } UNION { ?n property:P688 resource:Q23420723 } } . ?n rdf:type ontology:Q863908 }
hypothetical protein    SF4331 hypothetical protein    glr3379
action filter_type
action union
action find_reverse
entity hypothetical protein    glr3379
relation encodes
action find_reverse
entity hypothetical protein    SF4331
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    glr3379'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    SF4331']]}
SELECT DISTINCT ?n WHERE { { { ?n property:encodes resource:hypothetical_protein____glr3379 } UNION { ?n property:encodes resource:hypothetical_protein____SF4331 } } . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23266012 Q23093701
SYSTEM
hypothetical protein    glr3379, hypothetical protein    SF4331
Q23266012 Q23093701
OR((c(Q863908),P688,Q23569655), (c(Q863908),P688,Q23420723))
action filter_type
action union
action find_reverse
entity Q23569655
relation P688
action find_reverse
entity Q23420723
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q23569655'], [{'concept': 'Q863908'}, 'P688', 'Q23420723']]}
SELECT DISTINCT ?n WHERE { { { ?n property:P688 resource:Q23569655 } UNION { ?n property:P688 resource:Q23420723 } } . ?n rdf:type ontology:Q863908 }
hypothetical protein    glr3379 hypothetical protein    SF4331
Hypothetical protein glr3379 and hypothetical protein SF4331 encode hypothetical protein glr3379 or hypothetical protein SF4331
hypothetical protein    glr3379 hypothetical protein    SF4331
action filter_type
action union
action find_reverse
entity hypothetical protein    glr3379
relation encodes
action find_reverse
entity hypothetical protein    SF4331
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    glr3379'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    SF4331']]}
SELECT DISTINCT ?n WHERE { { { ?n property:encodes resource:hypothetical_protein____glr3379 } UNION { ?n property:encodes resource:hypothetical_protein____SF4331 } } . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q22292538
P361
Q1047113 Q9332 Q2996394
USER
Which biological processes are a component of greater number of special fields and behaviors than cytoplasmic transport, nurse cell to oocyte ?
(c(Q2996394),P361,c(Q1047113)|c(Q9332))
action greater
action union
action find_tuple_counts
relation P361
type Q2996394
type Q1047113
action find_tuple_counts
relation P361
type Q2996394
type Q9332
action count
action filter_multi_types
action find
entity Q22292538
relation P361
type Q1047113
type Q9332
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q1047113'}, {'concept': 'Q9332'}]]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?c ) AS ?l ) WHERE { { ?b property:P361 ?c . ?b rdf:type ontology:Q2996394 . ?c rdf:type ontology:Q1047113 } UNION { ?b property:P361 ?c . ?b rdf:type ontology:Q2996394 . ?c rdf:type ontology:Q9332 } } GROUP BY ?b } . FILTER ( ?l > ?x ) . { SELECT DISTINCT ( COUNT ( ?t ) AS ?x ) WHERE { resource:Q22292538 property:P361 ?t . { ?t rdf:type ?k . VALUES ( ?k ) { ( ontology:Q1047113 ) ( ontology:Q9332 ) } } } } }
cytoplasmic transport, nurse cell to oocyte
action greater
action union
action find_tuple_counts
relation part of
type biological process
type special field
action find_tuple_counts
relation part of
type biological process
type behavior
action count
action filter_multi_types
action find
entity cytoplasmic transport, nurse cell to oocyte
relation part of
type special field
type behavior
[{'concept': 'biological process'}, 'part of', [{'concept': 'special field'}, {'concept': 'behavior'}]]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?c ) AS ?l ) WHERE { { ?b property:part_of ?c . ?b rdf:type ontology:biological_process . ?c rdf:type ontology:special_field } UNION { ?b property:part_of ?c . ?b rdf:type ontology:biological_process . ?c rdf:type ontology:behavior } } GROUP BY ?b } . FILTER ( ?l > ?x ) . { SELECT DISTINCT ( COUNT ( ?t ) AS ?x ) WHERE { resource:cytoplasmic_transport,_nurse_cell_to_oocyte property:part_of ?t . { ?t rdf:type ?k . VALUES ( ?k ) { ( ontology:special_field ) ( ontology:behavior ) } } } } }
[]
special field behavior biological process
Q83944 Q16007097
SYSTEM
human evolution, habit
Q83944 Q16007097
(c(Q2996394),P361,c(Q1047113)|c(Q9332))
action greater
action union
action find_tuple_counts
relation P361
type Q2996394
type Q1047113
action find_tuple_counts
relation P361
type Q2996394
type Q9332
action count
action filter_multi_types
action find
entity Q22292538
relation P361
type Q1047113
type Q9332
[ANSWERS] are a component of greater number of special fields and behaviors than cytoplasmic transport, nurse cell to oocyte
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q1047113'}, {'concept': 'Q9332'}]]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?c ) AS ?l ) WHERE { { ?b property:P361 ?c . ?b rdf:type ontology:Q2996394 . ?c rdf:type ontology:Q1047113 } UNION { ?b property:P361 ?c . ?b rdf:type ontology:Q2996394 . ?c rdf:type ontology:Q9332 } } GROUP BY ?b } . FILTER ( ?l > ?x ) . { SELECT DISTINCT ( COUNT ( ?t ) AS ?x ) WHERE { resource:Q22292538 property:P361 ?t . { ?t rdf:type ?k . VALUES ( ?k ) { ( ontology:Q1047113 ) ( ontology:Q9332 ) } } } } }
human evolution habit
Human evolution and habit are a component of greater number of special fields and behaviors than cytoplasmic transport, nurse cell to oocyte
human evolution habit
action greater
action union
action find_tuple_counts
relation part of
type biological process
type special field
action find_tuple_counts
relation part of
type biological process
type behavior
action count
action filter_multi_types
action find
entity cytoplasmic transport, nurse cell to oocyte
relation part of
type special field
type behavior
[{'concept': 'biological process'}, 'part of', [{'concept': 'special field'}, {'concept': 'behavior'}]]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?c ) AS ?l ) WHERE { { ?b property:part_of ?c . ?b rdf:type ontology:biological_process . ?c rdf:type ontology:special_field } UNION { ?b property:part_of ?c . ?b rdf:type ontology:biological_process . ?c rdf:type ontology:behavior } } GROUP BY ?b } . FILTER ( ?l > ?x ) . { SELECT DISTINCT ( COUNT ( ?t ) AS ?x ) WHERE { resource:cytoplasmic_transport,_nurse_cell_to_oocyte property:part_of ?t . { ?t rdf:type ?k . VALUES ( ?k ) { ( ontology:special_field ) ( ontology:behavior ) } } } } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type|Incomplete
Q22291145
P361
Q1047113 Q9332 Q2996394
USER
And also tell me about establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification?
(c(Q2996394),P361,c(Q1047113)|c(Q9332))
action greater
action union
action find_tuple_counts
relation P361
type Q2996394
type Q1047113
action find_tuple_counts
relation P361
type Q2996394
type Q9332
action count
action filter_multi_types
action find
entity Q22291145
relation P361
type Q1047113
type Q9332
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q1047113'}, {'concept': 'Q9332'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?v ) AS ?s ) ?i WHERE { VALUES ( ?g ) { ( ontology:Q1047113 ) ( ontology:Q9332 ) } . ?v rdf:type ?g } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?q ) AS ?l ) WHERE { resource:Q22291145 property:P361 ?q . { ?q rdf:type ?b . VALUES ( ?b ) { ( ontology:Q1047113 ) ( ontology:Q9332 ) } } } } . FILTER ( ?s > ?l ) }
establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
action greater
action union
action find_tuple_counts
relation part of
type biological process
type special field
action find_tuple_counts
relation part of
type biological process
type behavior
action count
action filter_multi_types
action find
entity establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
relation part of
type special field
type behavior
[{'concept': 'biological process'}, 'part of', [{'concept': 'special field'}, {'concept': 'behavior'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?v ) AS ?s ) ?i WHERE { VALUES ( ?g ) { ( ontology:special_field ) ( ontology:behavior ) } . ?v rdf:type ?g } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?q ) AS ?l ) WHERE { resource:establishment_of_oocyte_nucleus_localization_involved_in_oocyte_dorsal/ventral_axis_specification property:part_of ?q . { ?q rdf:type ?b . VALUES ( ?b ) { ( ontology:special_field ) ( ontology:behavior ) } } } } . FILTER ( ?s > ?l ) }
[]
special field behavior biological process
Q83944 Q16007097
SYSTEM
human evolution, habit
Q83944 Q16007097
(c(Q2996394),P361,c(Q1047113)|c(Q9332))
action greater
action union
action find_tuple_counts
relation P361
type Q2996394
type Q1047113
action find_tuple_counts
relation P361
type Q2996394
type Q9332
action count
action filter_multi_types
action find
entity Q22291145
relation P361
type Q1047113
type Q9332
[ANSWERS]
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q1047113'}, {'concept': 'Q9332'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?v ) AS ?s ) ?i WHERE { VALUES ( ?g ) { ( ontology:Q1047113 ) ( ontology:Q9332 ) } . ?v rdf:type ?g } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?q ) AS ?l ) WHERE { resource:Q22291145 property:P361 ?q . { ?q rdf:type ?b . VALUES ( ?b ) { ( ontology:Q1047113 ) ( ontology:Q9332 ) } } } } . FILTER ( ?s > ?l ) }
human evolution habit
human evolution habit
action greater
action union
action find_tuple_counts
relation part of
type biological process
type special field
action find_tuple_counts
relation part of
type biological process
type behavior
action count
action filter_multi_types
action find
entity establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
relation part of
type special field
type behavior
[{'concept': 'biological process'}, 'part of', [{'concept': 'special field'}, {'concept': 'behavior'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?v ) AS ?s ) ?i WHERE { VALUES ( ?g ) { ( ontology:special_field ) ( ontology:behavior ) } . ?v rdf:type ?g } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?q ) AS ?l ) WHERE { resource:establishment_of_oocyte_nucleus_localization_involved_in_oocyte_dorsal/ventral_axis_specification property:part_of ?q . { ?q rdf:type ?b . VALUES ( ?b ) { ( ontology:special_field ) ( ontology:behavior ) } } } } . FILTER ( ?s > ?l ) }
[]