Simple Question (Direct)
Simple Question
Q21982323
P681
Q5058355
USER
What is a component of Non-histone chromosomal protein HMG-17 ?
(Q21982323,P681,c(Q5058355))
action filter_type
action find
entity Q21982323
relation P681
type Q5058355
['Q21982323', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?e WHERE { resource:Q21982323 property:P681 ?e . ?e rdf:type ontology:Q5058355 }
Non-histone chromosomal protein HMG-17
action filter_type
action find
entity Non-histone chromosomal protein HMG-17
relation cell component
type cellular component
['Non-histone chromosomal protein HMG-17', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?e WHERE { resource:Non-histone_chromosomal_protein_HMG-17 property:cell_component ?e . ?e rdf:type ontology:cellular_component }
[]
cellular component
Q180951
SYSTEM
chromatin
Q180951
(Q21982323,P681,c(Q5058355))
action filter_type
action find
entity Q21982323
relation P681
type Q5058355
A component of Non-histone chromosomal protein HMG-17 is a [ANSWER]
['Q21982323', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?e WHERE { resource:Q21982323 property:P681 ?e . ?e rdf:type ontology:Q5058355 }
chromatin
A component of Non-histone chromosomal protein HMG-17 is a chromatin
chromatin
action filter_type
action find
entity Non-histone chromosomal protein HMG-17
relation cell component
type cellular component
['Non-histone chromosomal protein HMG-17', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?e WHERE { resource:Non-histone_chromosomal_protein_HMG-17 property:cell_component ?e . ?e rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21982323
P702
Q863908
USER
What is the gene that encodes Non-histone chromosomal protein HMG-17 ?
(Q21982323,P702,c(Q863908))
action filter_type
action find
entity Q21982323
relation P702
type Q863908
['Q21982323', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q863908 . resource:Q21982323 property:P702 ?m }
Non-histone chromosomal protein HMG-17
action filter_type
action find
entity Non-histone chromosomal protein HMG-17
relation encoded by
type nucleic acid sequence
['Non-histone chromosomal protein HMG-17', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:nucleic_acid_sequence . resource:Non-histone_chromosomal_protein_HMG-17 property:encoded_by ?m }
[]
nucleic acid sequence
Q18251230
SYSTEM
Hmgn2
Q18251230
(Q21982323,P702,c(Q863908))
action filter_type
action find
entity Q21982323
relation P702
type Q863908
The gene that encodes Non-histone chromosomal protein HMG-17 is named [ANSWER]
['Q21982323', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q863908 . resource:Q21982323 property:P702 ?m }
Hmgn2
The gene that encodes Non-histone chromosomal protein HMG-17 is named Hmgn2
Hmgn2
action filter_type
action find
entity Non-histone chromosomal protein HMG-17
relation encoded by
type nucleic acid sequence
['Non-histone chromosomal protein HMG-17', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:nucleic_acid_sequence . resource:Non-histone_chromosomal_protein_HMG-17 property:encoded_by ?m }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q18251230 Q21982323
P688
Q181394
USER
Is Non-histone chromosomal protein HMG-17 encoded by that nucleic acid sequence ?
(Q18251230,P688,Q21982323)
action is_in
entity Q21982323
action find
entity Q18251230
relation P688
['Q18251230', 'P688', 'Q21982323']
ASK WHERE { resource:Q18251230 property:P688 resource:Q21982323 }
Hmgn2 Non-histone chromosomal protein HMG-17
action is_in
entity Non-histone chromosomal protein HMG-17
action find
entity Hmgn2
relation encodes
['Hmgn2', 'encodes', 'Non-histone chromosomal protein HMG-17']
ASK WHERE { resource:Hmgn2 property:encodes resource:Non-histone_chromosomal_protein_HMG-17 }
[]
nutrient
SYSTEM
YES
(Q18251230,P688,Q21982323)
action is_in
entity Q21982323
action find
entity Q18251230
relation P688
[ANSWER]
['Q18251230', 'P688', 'Q21982323']
ASK WHERE { resource:Q18251230 property:P688 resource:Q21982323 }
Yes
action is_in
entity Non-histone chromosomal protein HMG-17
action find
entity Hmgn2
relation encodes
['Hmgn2', 'encodes', 'Non-histone chromosomal protein HMG-17']
ASK WHERE { resource:Hmgn2 property:encodes resource:Non-histone_chromosomal_protein_HMG-17 }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23326109 Q18251230
P688
Q181394
USER
Which nutrients are Hmgn2 or MotA/TolQ/ExbB proton channel family protein    DVU2806 an encoding of ?
OR((Q18251230,P688,c(Q181394)), (Q23326109,P688,c(Q181394)))
action filter_type
action union
action find
entity Q18251230
relation P688
action find
entity Q23326109
relation P688
type Q181394
{'OR': [['Q18251230', 'P688', {'concept': 'Q181394'}], ['Q23326109', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?b WHERE { { { resource:Q18251230 property:P688 ?b } UNION { resource:Q23326109 property:P688 ?b } } . ?b rdf:type ontology:Q181394 }
MotA/TolQ/ExbB proton channel family protein    DVU2806 Hmgn2
action filter_type
action union
action find
entity Hmgn2
relation encodes
action find
entity MotA/TolQ/ExbB proton channel family protein    DVU2806
relation encodes
type nutrient
{'OR': [['Hmgn2', 'encodes', {'concept': 'nutrient'}], ['MotA/TolQ/ExbB proton channel family protein    DVU2806', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?b WHERE { { { resource:Hmgn2 property:encodes ?b } UNION { resource:MotA/TolQ/ExbB_proton_channel_family_protein____DVU2806 property:encodes ?b } } . ?b rdf:type ontology:nutrient }
[]
nutrient
Q21982323 Q23464115
SYSTEM
Non-histone chromosomal protein HMG-17, MotA/TolQ/ExbB proton channel family protein    DVU2806
Q21982323 Q23464115
OR((Q18251230,P688,c(Q181394)), (Q23326109,P688,c(Q181394)))
action filter_type
action union
action find
entity Q18251230
relation P688
action find
entity Q23326109
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q18251230', 'P688', {'concept': 'Q181394'}], ['Q23326109', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?b WHERE { { { resource:Q18251230 property:P688 ?b } UNION { resource:Q23326109 property:P688 ?b } } . ?b rdf:type ontology:Q181394 }
Non-histone chromosomal protein HMG-17 MotA/TolQ/ExbB proton channel family protein    DVU2806
Non-histone chromosomal protein HMG-17 and MotA/TolQ/ExbB proton channel family protein DVU2806 are Hmgn2 or MotA/TolQ/ExbB proton channel family protein DVU2806 an encoding of
Non-histone chromosomal protein HMG-17 MotA/TolQ/ExbB proton channel family protein    DVU2806
action filter_type
action union
action find
entity Hmgn2
relation encodes
action find
entity MotA/TolQ/ExbB proton channel family protein    DVU2806
relation encodes
type nutrient
{'OR': [['Hmgn2', 'encodes', {'concept': 'nutrient'}], ['MotA/TolQ/ExbB proton channel family protein    DVU2806', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?b WHERE { { { resource:Hmgn2 property:encodes ?b } UNION { resource:MotA/TolQ/ExbB_proton_channel_family_protein____DVU2806 property:encodes ?b } } . ?b rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23464115 Q22954521
P688
Q863908
USER
How many nucleic acid sequences encodes MotA/TolQ/ExbB proton channel family protein    DVU2806 or Zika virus RNA-dependent RNA polymerase NS5 ?
(c(Q863908),P688,Q23464115) (c(Q863908),P688,Q22954521)
action count
action union
action filter_type
action find_reverse
entity Q23464115
relation P688
type Q863908
action filter_type
action find_reverse
entity Q22954521
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23464115'] [{'concept': 'Q863908'}, 'P688', 'Q22954521']
SELECT DISTINCT ( COUNT ( ?a ) AS ?d ) WHERE { ?a property:P688 ?m . VALUES ( ?m ) { ( resource:Q23464115 ) ( resource:Q22954521 ) } }
MotA/TolQ/ExbB proton channel family protein    DVU2806 Zika virus RNA-dependent RNA polymerase NS5
action count
action union
action filter_type
action find_reverse
entity MotA/TolQ/ExbB proton channel family protein    DVU2806
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity Zika virus RNA-dependent RNA polymerase NS5
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'MotA/TolQ/ExbB proton channel family protein    DVU2806'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Zika virus RNA-dependent RNA polymerase NS5']
SELECT DISTINCT ( COUNT ( ?a ) AS ?d ) WHERE { ?a property:encodes ?m . VALUES ( ?m ) { ( resource:MotA/TolQ/ExbB_proton_channel_family_protein____DVU2806 ) ( resource:Zika_virus_RNA-dependent_RNA_polymerase_NS5 ) } }
[]
nucleic acid sequence
SYSTEM
2
Q23326109 Q22918717
(c(Q863908),P688,Q23464115) (c(Q863908),P688,Q22954521)
action count
action union
action filter_type
action find_reverse
entity Q23464115
relation P688
type Q863908
action filter_type
action find_reverse
entity Q22954521
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q23464115'] [{'concept': 'Q863908'}, 'P688', 'Q22954521']
SELECT DISTINCT ( COUNT ( ?a ) AS ?d ) WHERE { ?a property:P688 ?m . VALUES ( ?m ) { ( resource:Q23464115 ) ( resource:Q22954521 ) } }
MotA/TolQ/ExbB proton channel family protein    DVU2806 ZIKV flavivirus polyprotein gene
2
action count
action union
action filter_type
action find_reverse
entity MotA/TolQ/ExbB proton channel family protein    DVU2806
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity Zika virus RNA-dependent RNA polymerase NS5
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'MotA/TolQ/ExbB proton channel family protein    DVU2806'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Zika virus RNA-dependent RNA polymerase NS5']
SELECT DISTINCT ( COUNT ( ?a ) AS ?d ) WHERE { ?a property:encodes ?m . VALUES ( ?m ) { ( resource:MotA/TolQ/ExbB_proton_channel_family_protein____DVU2806 ) ( resource:Zika_virus_RNA-dependent_RNA_polymerase_NS5 ) } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23464115
P703
Q16521
USER
Where is MotA/TolQ/ExbB proton channel family protein    DVU2806 found ?
(Q23464115,P703,c(Q16521))
action filter_type
action find
entity Q23464115
relation P703
type Q16521
['Q23464115', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?j WHERE { resource:Q23464115 property:P703 ?j . ?j rdf:type ontology:Q16521 }
MotA/TolQ/ExbB proton channel family protein    DVU2806
action filter_type
action find
entity MotA/TolQ/ExbB proton channel family protein    DVU2806
relation found in taxon
type taxon
['MotA/TolQ/ExbB proton channel family protein    DVU2806', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?j WHERE { resource:MotA/TolQ/ExbB_proton_channel_family_protein____DVU2806 property:found_in_taxon ?j . ?j rdf:type ontology:taxon }
[]
taxon
Q21383317
SYSTEM
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Q21383317
(Q23464115,P703,c(Q16521))
action filter_type
action find
entity Q23464115
relation P703
type Q16521
MotA / TolQ / ExbB proton channel family protein DVU2806 found in [ANSWER] is
['Q23464115', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?j WHERE { resource:Q23464115 property:P703 ?j . ?j rdf:type ontology:Q16521 }
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
MotA / TolQ / ExbB proton channel family protein DVU2806 found in Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough is
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
action filter_type
action find
entity MotA/TolQ/ExbB proton channel family protein    DVU2806
relation found in taxon
type taxon
['MotA/TolQ/ExbB proton channel family protein    DVU2806', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?j WHERE { resource:MotA/TolQ/ExbB_proton_channel_family_protein____DVU2806 property:found_in_taxon ?j . ?j rdf:type ontology:taxon }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q24611934
Q16521
USER
And what about PROP1?
(Q24611934,P703,c(Q16521))
action filter_type
action find
entity Q24611934
relation P703
type Q16521
['Q24611934', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?s WHERE { resource:Q24611934 property:P703 ?s . ?s rdf:type ontology:Q16521 }
PROP1
action filter_type
action find
entity PROP1
relation found in taxon
type taxon
['PROP1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?s WHERE { resource:PROP1 property:found_in_taxon ?s . ?s rdf:type ontology:taxon }
[]
taxon
Q618026
SYSTEM
Southern pig-tailed macaque
Q618026
(Q24611934,P703,c(Q16521))
action filter_type
action find
entity Q24611934
relation P703
type Q16521
[ANSWER]
['Q24611934', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?s WHERE { resource:Q24611934 property:P703 ?s . ?s rdf:type ontology:Q16521 }
Southern pig-tailed macaque
Southern pig-tailed macaque
action filter_type
action find
entity PROP1
relation found in taxon
type taxon
['PROP1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?s WHERE { resource:PROP1 property:found_in_taxon ?s . ?s rdf:type ontology:taxon }
[]