Simple Question (Direct)
Simple Question
Q24150216
P703
Q631147
USER
Where is L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042 found ?
(Q24150216,P703,c(Q631147))
action filter_type
action find
entity Q24150216
relation P703
type Q631147
['Q24150216', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?e WHERE { resource:Q24150216 property:P703 ?e . ?e rdf:type ontology:Q631147 }
L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
action filter_type
action find
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
relation found in taxon
type infraspecific name
['L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?e WHERE { resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 property:found_in_taxon ?e . ?e rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102931
SYSTEM
Escherichia coli UMN026
Q21102931
(Q24150216,P703,c(Q631147))
action filter_type
action find
entity Q24150216
relation P703
type Q631147
L-carnitine / gamma-butyrobetaine antiporter ECUMN_0042 is found in [ANSWER]
['Q24150216', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?e WHERE { resource:Q24150216 property:P703 ?e . ?e rdf:type ontology:Q631147 }
Escherichia coli UMN026
L-carnitine / gamma-butyrobetaine antiporter ECUMN_0042 is found in Escherichia coli UMN026
Escherichia coli UMN026
action filter_type
action find
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
relation found in taxon
type infraspecific name
['L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?e WHERE { resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 property:found_in_taxon ?e . ?e rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24150216
P702
Q863908
USER
What is the gene that encodes that nutrient ?
(Q21102931,P702,c(Q863908))
action filter_type
action find
entity Q24150216
relation P702
type Q863908
['Q21102931', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { resource:Q24150216 property:P702 ?g . ?g rdf:type ontology:Q863908 }
L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
action filter_type
action find
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
relation encoded by
type nucleic acid sequence
['Escherichia coli UMN026', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 property:encoded_by ?g . ?g rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23151442
SYSTEM
L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
Q23151442
(Q21102931,P702,c(Q863908))
action filter_type
action find
entity Q24150216
relation P702
type Q863908
The gene that encodes that nutrient is the L-carnitine/gamma-butyrobetaine antiporter ECUMN 0042
['Q21102931', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { resource:Q24150216 property:P702 ?g . ?g rdf:type ontology:Q863908 }
L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
The gene that encodes that nutrient is the L-carnitine/gamma-butyrobetaine antiporter ECUMN 0042
L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
action filter_type
action find
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
relation encoded by
type nucleic acid sequence
['Escherichia coli UMN026', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 property:encoded_by ?g . ?g rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q23151442 Q24150216
P688
Q181394
USER
Does that nucleic acid sequence encode L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042 ?
(Q23151442,P688,Q24150216)
action is_in
entity Q24150216
action find
entity Q23151442
relation P688
['Q23151442', 'P688', 'Q24150216']
ASK WHERE { resource:Q23151442 property:P688 resource:Q24150216 }
L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042 L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
action is_in
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
action find
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
relation encodes
['L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042', 'encodes', 'L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042']
ASK WHERE { resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 property:encodes resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 }
[]
nutrient
SYSTEM
YES
(Q23151442,P688,Q24150216)
action is_in
entity Q24150216
action find
entity Q23151442
relation P688
[ANSWER]
['Q23151442', 'P688', 'Q24150216']
ASK WHERE { resource:Q23151442 property:P688 resource:Q24150216 }
Yes
action is_in
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
action find
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
relation encodes
['L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042', 'encodes', 'L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042']
ASK WHERE { resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 property:encodes resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q24150216 Q29548
P681
Q5058355
USER
Is plasma membrane a component of L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042 ?
(Q24150216,P681,Q29548)
action is_in
entity Q29548
action find
entity Q24150216
relation P681
['Q24150216', 'P681', 'Q29548']
ASK WHERE { resource:Q24150216 property:P681 resource:Q29548 }
L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042 plasma membrane
action is_in
entity plasma membrane
action find
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
relation cell component
['L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042', 'cell component', 'plasma membrane']
ASK WHERE { resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 property:cell_component resource:plasma_membrane }
[]
cellular component
SYSTEM
YES
(Q24150216,P681,Q29548)
action is_in
entity Q29548
action find
entity Q24150216
relation P681
[ANSWER]
['Q24150216', 'P681', 'Q29548']
ASK WHERE { resource:Q24150216 property:P681 resource:Q29548 }
Yes
action is_in
entity plasma membrane
action find
entity L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042
relation cell component
['L-carnitine/gamma-butyrobetaine antiporter    ECUMN_0042', 'cell component', 'plasma membrane']
ASK WHERE { resource:L-carnitine/gamma-butyrobetaine_antiporter____ECUMN_0042 property:cell_component resource:plasma_membrane }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q8386 Q181394 Q181394
USER
Which nutrients interacts with approximately 24 drugs or nutrients ?
(c(Q181394),P129,c(Q8386)|c(Q181394))
action approx
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q181394
value 24
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ?i ( COUNT ( ?o ) AS ?z ) WHERE { { ?i property:P129 ?o . ?o rdf:type ontology:Q181394 . ?i rdf:type ontology:Q181394 } UNION { ?i rdf:type ontology:Q181394 . ?o rdf:type ontology:Q8386 . ?i property:P129 ?o } } GROUP BY ?i } . FILTER ( ?z = 24 ) }
action approx
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 24
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ?i ( COUNT ( ?o ) AS ?z ) WHERE { { ?i property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient . ?i rdf:type ontology:nutrient } UNION { ?i rdf:type ontology:nutrient . ?o rdf:type ontology:drug . ?i property:physically_interacts_with ?o } } GROUP BY ?i } . FILTER ( ?z = 24 ) }
[]
drug nutrient nutrient
Q4639596 Q415364 Q5123372
SYSTEM
5-hydroxytryptamine receptor 2B, Prostaglandin G/H synthase 2, Mu-type opioid receptor
Q7050954 Q308856 Q5123372 Q410142 Q288797 Q287958 Q4639596 Q4734884 Q4734887 Q21115051 Q415364 Q21109355 Q4734894 Q21110872 Q4734892 Q4734891 Q21115046 Q21109363
(c(Q181394),P129,c(Q8386)|c(Q181394))
action approx
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q181394
value 24
[ANSWERS] interact with approximately 24 drugs or nutrients
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ?i ( COUNT ( ?o ) AS ?z ) WHERE { { ?i property:P129 ?o . ?o rdf:type ontology:Q181394 . ?i rdf:type ontology:Q181394 } UNION { ?i rdf:type ontology:Q181394 . ?o rdf:type ontology:Q8386 . ?i property:P129 ?o } } GROUP BY ?i } . FILTER ( ?z = 24 ) }
Sodium-dependent noradrenaline transporter D(4) dopamine receptor Mu-type opioid receptor Sodium-dependent serotonin transporter 5-hydroxytryptamine receptor 1B Beta-1 adrenergic receptor 5-hydroxytryptamine receptor 2B Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor 5-hydroxytryptamine receptor 1E Prostaglandin G/H synthase 2 5-hydroxytryptamine receptor 7 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Alpha-2C adrenergic receptor 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 6
5-hydroxytryptamine receptor 2B, Prostaglandin G/H synthase 2 and Mu-type opioid receptor interact with approximately 24 drugs or nutrients
5-hydroxytryptamine receptor 2B Prostaglandin G/H synthase 2 Mu-type opioid receptor
action approx
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 24
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ?i ( COUNT ( ?o ) AS ?z ) WHERE { { ?i property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient . ?i rdf:type ontology:nutrient } UNION { ?i rdf:type ontology:nutrient . ?o rdf:type ontology:drug . ?i property:physically_interacts_with ?o } } GROUP BY ?i } . FILTER ( ?z = 24 ) }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q4639596
P129
Q79529
USER
How many chemical substances do 5-hydroxytryptamine receptor 2B interact with ?
(Q4639596,P129,c(Q79529))
action count
action filter_type
action find
entity Q4639596
relation P129
type Q79529
['Q4639596', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?d ) WHERE { ?g rdf:type ontology:Q79529 . resource:Q4639596 property:P129 ?g }
5-hydroxytryptamine receptor 2B
action count
action filter_type
action find
entity 5-hydroxytryptamine receptor 2B
relation physically interacts with
type chemical substance
['5-hydroxytryptamine receptor 2B', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?d ) WHERE { ?g rdf:type ontology:chemical_substance . resource:5-hydroxytryptamine_receptor_2B property:physically_interacts_with ?g }
[]
chemical substance
SYSTEM
47
Q6592066 Q7940202 Q5514387 Q419405 Q7906743 Q253187 Q7388910 Q4836376 Q7372445 Q44814 Q413976 Q4734914 Q7101734 Q7577785 Q6822173 Q15124168 Q286112 Q6823517 Q8042940 Q3937260 Q6456080 Q3069482 Q7388908 Q5567525 Q7296272 Q167934 Q15410189 Q7277958 Q15409372 Q7452012 Q209251 Q4644282 Q409439 Q44804 Q7388907 Q7101741 Q44787 Q4836835 Q7277678 Q4639580 Q4652228 Q7388905 Q5010989 Q209241 Q75884 Q415997 Q7272557
(Q4639596,P129,c(Q79529))
action count
action filter_type
action find
entity Q4639596
relation P129
type Q79529
[ANSWER]
['Q4639596', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?d ) WHERE { ?g rdf:type ontology:Q79529 . resource:Q4639596 property:P129 ?g }
spiroxatrine volinanserin GR 127935 TFMPP VER-3323 quinpirole SB-277,011-A BRL-15572 roxindole SDZ SER-082 piribedil α-methyl-5-HT Org 12962 spiramide mesulergine MK-212 Meta-Chlorophenylpiperazine metergoline xanomeline ritanserin L-741,626 norfenfluramine SB 242084 glemanserin rauwolscine 5-hydroxytryptamine SB 243213 RU 24969 1-naphthylpiperazine norfluoxetine DOI 8-OH-DPAT tryptamine RS-127445 SB 216641 ORG-37684 SB 204741 BW723C86 RS-102221 5-CT AL-37350A SB 206553 CGS-12066 brolamfetamine piboserod Ketanserin quipazine
47
action count
action filter_type
action find
entity 5-hydroxytryptamine receptor 2B
relation physically interacts with
type chemical substance
['5-hydroxytryptamine receptor 2B', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?d ) WHERE { ?g rdf:type ontology:chemical_substance . resource:5-hydroxytryptamine_receptor_2B property:physically_interacts_with ?g }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q21109355
P129
Q79529
USER
And how about 5-hydroxytryptamine receptor 7?
(Q21109355,P129,c(Q79529))
action count
action filter_type
action find
entity Q21109355
relation P129
type Q79529
['Q21109355', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) WHERE { resource:Q21109355 property:P129 ?b . ?b rdf:type ontology:Q79529 }
5-hydroxytryptamine receptor 7
action count
action filter_type
action find
entity 5-hydroxytryptamine receptor 7
relation physically interacts with
type chemical substance
['5-hydroxytryptamine receptor 7', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) WHERE { resource:5-hydroxytryptamine_receptor_7 property:physically_interacts_with ?b . ?b rdf:type ontology:chemical_substance }
[]
chemical substance
SYSTEM
20
Q4352011 Q855468 Q6822173 Q6823517 Q258775 Q1427742 Q4596865 Q167934 Q15409372 Q4644282 Q8042940 Q409439 Q855345 Q855474 Q4639580 Q855654 Q855386 Q3937260 Q4370 Q415997
(Q21109355,P129,c(Q79529))
action count
action filter_type
action find
entity Q21109355
relation P129
type Q79529
[ANSWER]
['Q21109355', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) WHERE { resource:Q21109355 property:P129 ?b . ?b rdf:type ontology:Q79529 }
5-MeOT LP-44 mesulergine metergoline EMDT SB269970 2-bromo-LSD 5-hydroxytryptamine 1-naphthylpiperazine 8-OH-DPAT xanomeline tryptamine SB 258719 AS-19 5-CT fluperlapine LP-12 ritanserin oleamide Ketanserin
20
action count
action filter_type
action find
entity 5-hydroxytryptamine receptor 7
relation physically interacts with
type chemical substance
['5-hydroxytryptamine receptor 7', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) WHERE { resource:5-hydroxytryptamine_receptor_7 property:physically_interacts_with ?b . ?b rdf:type ontology:chemical_substance }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q5629167
Q79529
USER
And how about Histone deacetylase 1?
(Q5629167,P129,c(Q79529))
action count
action filter_type
action find
entity Q5629167
relation P129
type Q79529
['Q5629167', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?h ) WHERE { resource:Q5629167 property:P129 ?r . ?r rdf:type ontology:Q79529 }
Histone deacetylase 1
action count
action filter_type
action find
entity Histone deacetylase 1
relation physically interacts with
type chemical substance
['Histone deacetylase 1', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?h ) WHERE { resource:Histone_deacetylase_1 property:physically_interacts_with ?r . ?r rdf:type ontology:chemical_substance }
[]
chemical substance
SYSTEM
10
(Q5629167,P129,c(Q79529))
action count
action filter_type
action find
entity Q5629167
relation P129
type Q79529
[ANSWER]
['Q5629167', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?h ) WHERE { resource:Q5629167 property:P129 ?r . ?r rdf:type ontology:Q79529 }
10
action count
action filter_type
action find
entity Histone deacetylase 1
relation physically interacts with
type chemical substance
['Histone deacetylase 1', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?h ) WHERE { resource:Histone_deacetylase_1 property:physically_interacts_with ?r . ?r rdf:type ontology:chemical_substance }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q5629167
P682
Q1057
USER
Which metabolic process is that nutrient involved in ?
action filter_type
action find
entity Q5629167
relation P682
type Q1057
SELECT DISTINCT ?m WHERE { resource:Q5629167 property:P682 ?m . ?m rdf:type ontology:Q1057 }
Histone deacetylase 1
action filter_type
action find
entity Histone deacetylase 1
relation biological process
type metabolic process
SELECT DISTINCT ?m WHERE { resource:Histone_deacetylase_1 property:biological_process ?m . ?m rdf:type ontology:metabolic_process }
[]
metabolic process
Q15313450
SYSTEM
methylation-dependent chromatin silencing
Q15313450
action filter_type
action find
entity Q5629167
relation P682
type Q1057
That nutrient is the [ANSWER]
SELECT DISTINCT ?m WHERE { resource:Q5629167 property:P682 ?m . ?m rdf:type ontology:Q1057 }
methylation-dependent chromatin silencing
That nutrient is the methylation-dependent chromatin silencing
methylation-dependent chromatin silencing
action filter_type
action find
entity Histone deacetylase 1
relation biological process
type metabolic process
SELECT DISTINCT ?m WHERE { resource:Histone_deacetylase_1 property:biological_process ?m . ?m rdf:type ontology:metabolic_process }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Logical operators
Q5629167
P129
Q79529 Q8386
USER
How many chemical substances or drugs communicates with Histone deacetylase 1 ?
(c(Q79529),P129,Q5629167) (c(Q8386),P129,Q5629167)
action count
action union
action filter_type
action find_reverse
entity Q5629167
relation P129
type Q79529
action filter_type
action find_reverse
entity Q5629167
relation P129
type Q8386
[{'concept': 'Q79529'}, 'P129', 'Q5629167'] [{'concept': 'Q8386'}, 'P129', 'Q5629167']
SELECT DISTINCT ( COUNT ( ?l ) AS ?s ) WHERE { { ?l property:P129 resource:Q5629167 . ?l rdf:type ontology:Q79529 } UNION { ?l property:P129 resource:Q5629167 . ?l rdf:type ontology:Q8386 } }
Histone deacetylase 1
action count
action union
action filter_type
action find_reverse
entity Histone deacetylase 1
relation physically interacts with
type chemical substance
action filter_type
action find_reverse
entity Histone deacetylase 1
relation physically interacts with
type drug
[{'concept': 'chemical substance'}, 'physically interacts with', 'Histone deacetylase 1'] [{'concept': 'drug'}, 'physically interacts with', 'Histone deacetylase 1']
SELECT DISTINCT ( COUNT ( ?l ) AS ?s ) WHERE { { ?l property:physically_interacts_with resource:Histone_deacetylase_1 . ?l rdf:type ontology:chemical_substance } UNION { ?l property:physically_interacts_with resource:Histone_deacetylase_1 . ?l rdf:type ontology:drug } }
[]
chemical substance drug
SYSTEM
15
Q425894 Q4667249 Q905901 Q7272620 Q7363205 Q424869 Q1281020 Q7131441 Q16829635 Q4882925 Q18394103 Q18344027 Q240642 Q426257 Q193213
(c(Q79529),P129,Q5629167) (c(Q8386),P129,Q5629167)
action count
action union
action filter_type
action find_reverse
entity Q5629167
relation P129
type Q79529
action filter_type
action find_reverse
entity Q5629167
relation P129
type Q8386
[ANSWER]
[{'concept': 'Q79529'}, 'P129', 'Q5629167'] [{'concept': 'Q8386'}, 'P129', 'Q5629167']
SELECT DISTINCT ( COUNT ( ?l ) AS ?s ) WHERE { { ?l property:P129 resource:Q5629167 . ?l rdf:type ontology:Q79529 } UNION { ?l property:P129 resource:Q5629167 . ?l rdf:type ontology:Q8386 } }
trichostatin A abexinostat vorinostat quisinostat romidepsin mocetinostat entinostat panobinostat apicidin Belinostat resminostat pracinostat valproic acid givinostat butyric acid
15
action count
action union
action filter_type
action find_reverse
entity Histone deacetylase 1
relation physically interacts with
type chemical substance
action filter_type
action find_reverse
entity Histone deacetylase 1
relation physically interacts with
type drug
[{'concept': 'chemical substance'}, 'physically interacts with', 'Histone deacetylase 1'] [{'concept': 'drug'}, 'physically interacts with', 'Histone deacetylase 1']
SELECT DISTINCT ( COUNT ( ?l ) AS ?s ) WHERE { { ?l property:physically_interacts_with resource:Histone_deacetylase_1 . ?l rdf:type ontology:chemical_substance } UNION { ?l property:physically_interacts_with resource:Histone_deacetylase_1 . ?l rdf:type ontology:drug } }
[]
Logical Reasoning (All)
Logical|Difference|Single_Relation
Q21108118 Q4639596
P129
Q8386
USER
Which drugs do 5-hydroxytryptamine receptor 2B but not 5-hydroxytryptamine receptor 2C contact with ?
AND((Q4639596,P129,c(Q8386)), NOT((Q21108118,P129,c(Q8386))))
action filter_type
action difference
action find
entity Q4639596
relation P129
action find
entity Q21108118
relation P129
type Q8386
{'AND': [['Q4639596', 'P129', {'concept': 'Q8386'}], {'NOT': [['Q21108118', 'P129', {'concept': 'Q8386'}]]}]}
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:Q8386 . MINUS { resource:Q21108118 property:P129 ?n } . resource:Q4639596 property:P129 ?n }
5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 2B
action filter_type
action difference
action find
entity 5-hydroxytryptamine receptor 2B
relation physically interacts with
action find
entity 5-hydroxytryptamine receptor 2C
relation physically interacts with
type drug
{'AND': [['5-hydroxytryptamine receptor 2B', 'physically interacts with', {'concept': 'drug'}], {'NOT': [['5-hydroxytryptamine receptor 2C', 'physically interacts with', {'concept': 'drug'}]]}]}
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:drug . MINUS { resource:5-hydroxytryptamine_receptor_2C property:physically_interacts_with ?n } . resource:5-hydroxytryptamine_receptor_2B property:physically_interacts_with ?n }
[]
drug
Q422244 Q180912 Q418101 Q251347 Q412226
SYSTEM
fluoxetine, melatonin, pindolol, haloperidol, yohimbine
Q422244 Q180912 Q418101 Q251347 Q412226
AND((Q4639596,P129,c(Q8386)), NOT((Q21108118,P129,c(Q8386))))
action filter_type
action difference
action find
entity Q4639596
relation P129
action find
entity Q21108118
relation P129
type Q8386
[ANSWERS] 5-hydroxytryptamine receptor 2B but not 5-hydroxytryptamine receptor 2C contact with
{'AND': [['Q4639596', 'P129', {'concept': 'Q8386'}], {'NOT': [['Q21108118', 'P129', {'concept': 'Q8386'}]]}]}
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:Q8386 . MINUS { resource:Q21108118 property:P129 ?n } . resource:Q4639596 property:P129 ?n }
fluoxetine melatonin pindolol haloperidol yohimbine
Fluoxetine, melatonin, pindolol, haloperidol and yohimbine 5-hydroxytryptamine receptor 2B but not 5-hydroxytryptamine receptor 2C contact with
fluoxetine melatonin pindolol haloperidol yohimbine
action filter_type
action difference
action find
entity 5-hydroxytryptamine receptor 2B
relation physically interacts with
action find
entity 5-hydroxytryptamine receptor 2C
relation physically interacts with
type drug
{'AND': [['5-hydroxytryptamine receptor 2B', 'physically interacts with', {'concept': 'drug'}], {'NOT': [['5-hydroxytryptamine receptor 2C', 'physically interacts with', {'concept': 'drug'}]]}]}
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:drug . MINUS { resource:5-hydroxytryptamine_receptor_2C property:physically_interacts_with ?n } . resource:5-hydroxytryptamine_receptor_2B property:physically_interacts_with ?n }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q22990837
P129
Q181394
USER
Does glycerol metabolism activator    PA1978 interact with those drugs ?
(Q22990837,P129,Q422244) (Q22990837,P129,Q180912) (Q22990837,P129,Q418101) (Q22990837,P129,Q251347) (Q22990837,P129,Q412226)
action is_in
entity prev_answer
action find
entity Q22990837
relation P129
['Q22990837', 'P129', 'Q422244'] ['Q22990837', 'P129', 'Q180912'] ['Q22990837', 'P129', 'Q418101'] ['Q22990837', 'P129', 'Q251347'] ['Q22990837', 'P129', 'Q412226']
ASK WHERE { VALUES ( ?i ) { ( resource:Q422244 ) ( resource:Q180912 ) ( resource:Q418101 ) } . resource:Q22990837 property:P129 ?i }
glycerol metabolism activator    PA1978
action is_in
entity prev_answer
action find
entity glycerol metabolism activator    PA1978
relation physically interacts with
['glycerol metabolism activator    PA1978', 'physically interacts with', 'fluoxetine'] ['glycerol metabolism activator    PA1978', 'physically interacts with', 'melatonin'] ['glycerol metabolism activator    PA1978', 'physically interacts with', 'pindolol'] ['glycerol metabolism activator    PA1978', 'physically interacts with', 'haloperidol'] ['glycerol metabolism activator    PA1978', 'physically interacts with', 'yohimbine']
ASK WHERE { VALUES ( ?i ) { ( resource:fluoxetine ) ( resource:melatonin ) ( resource:pindolol ) } . resource:glycerol_metabolism_activator____PA1978 property:physically_interacts_with ?i }
[]
nutrient
SYSTEM
NO
(Q22990837,P129,Q422244) (Q22990837,P129,Q180912) (Q22990837,P129,Q418101) (Q22990837,P129,Q251347) (Q22990837,P129,Q412226)
action is_in
entity prev_answer
action find
entity Q22990837
relation P129
[ANSWER]
['Q22990837', 'P129', 'Q422244'] ['Q22990837', 'P129', 'Q180912'] ['Q22990837', 'P129', 'Q418101'] ['Q22990837', 'P129', 'Q251347'] ['Q22990837', 'P129', 'Q412226']
ASK WHERE { VALUES ( ?i ) { ( resource:Q422244 ) ( resource:Q180912 ) ( resource:Q418101 ) } . resource:Q22990837 property:P129 ?i }
No
action is_in
entity prev_answer
action find
entity glycerol metabolism activator    PA1978
relation physically interacts with
['glycerol metabolism activator    PA1978', 'physically interacts with', 'fluoxetine'] ['glycerol metabolism activator    PA1978', 'physically interacts with', 'melatonin'] ['glycerol metabolism activator    PA1978', 'physically interacts with', 'pindolol'] ['glycerol metabolism activator    PA1978', 'physically interacts with', 'haloperidol'] ['glycerol metabolism activator    PA1978', 'physically interacts with', 'yohimbine']
ASK WHERE { VALUES ( ?i ) { ( resource:fluoxetine ) ( resource:melatonin ) ( resource:pindolol ) } . resource:glycerol_metabolism_activator____PA1978 property:physically_interacts_with ?i }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q422244
P129
Q181394
USER
How many nutrients do fluoxetine contact with ?
(Q422244,P129,c(Q181394))
action count
action filter_type
action find
entity Q422244
relation P129
type Q181394
['Q422244', 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?f ) WHERE { resource:Q422244 property:P129 ?z . ?z rdf:type ontology:Q181394 }
fluoxetine
action count
action filter_type
action find
entity fluoxetine
relation physically interacts with
type nutrient
['fluoxetine', 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?f ) WHERE { resource:fluoxetine property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
5
Q21134814 Q21105176 Q410142 Q4639596 Q21497878
(Q422244,P129,c(Q181394))
action count
action filter_type
action find
entity Q422244
relation P129
type Q181394
[ANSWER]
['Q422244', 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?f ) WHERE { resource:Q422244 property:P129 ?z . ?z rdf:type ontology:Q181394 }
Equilibrative nucleoside transporter 4 Anoctamin-1 Sodium-dependent serotonin transporter 5-hydroxytryptamine receptor 2B G protein-activated inward rectifier potassium channel 2
5
action count
action filter_type
action find
entity fluoxetine
relation physically interacts with
type nutrient
['fluoxetine', 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?f ) WHERE { resource:fluoxetine property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q241150
P129
Q181394
USER
And how about aminoglutethimide?
(Q241150,P129,c(Q181394))
action count
action filter_type
action find
entity Q241150
relation P129
type Q181394
['Q241150', 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?u ) WHERE { resource:Q241150 property:P129 ?o . ?o rdf:type ontology:Q181394 }
aminoglutethimide
action count
action filter_type
action find
entity aminoglutethimide
relation physically interacts with
type nutrient
['aminoglutethimide', 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?u ) WHERE { resource:aminoglutethimide property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q415287
(Q241150,P129,c(Q181394))
action count
action filter_type
action find
entity Q241150
relation P129
type Q181394
[ANSWER]
['Q241150', 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?u ) WHERE { resource:Q241150 property:P129 ?o . ?o rdf:type ontology:Q181394 }
Aromatase
1
action count
action filter_type
action find
entity aminoglutethimide
relation physically interacts with
type nutrient
['aminoglutethimide', 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?u ) WHERE { resource:aminoglutethimide property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q905901
Q181394
USER
And what about vorinostat?
(Q905901,P129,c(Q181394))
action count
action filter_type
action find
entity Q905901
relation P129
type Q181394
['Q905901', 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?c ) WHERE { resource:Q905901 property:P129 ?l . ?l rdf:type ontology:Q181394 }
vorinostat
action count
action filter_type
action find
entity vorinostat
relation physically interacts with
type nutrient
['vorinostat', 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?c ) WHERE { resource:vorinostat property:physically_interacts_with ?l . ?l rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
9
(Q905901,P129,c(Q181394))
action count
action filter_type
action find
entity Q905901
relation P129
type Q181394
[ANSWER]
['Q905901', 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?c ) WHERE { resource:Q905901 property:P129 ?l . ?l rdf:type ontology:Q181394 }
9
action count
action filter_type
action find
entity vorinostat
relation physically interacts with
type nutrient
['vorinostat', 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?c ) WHERE { resource:vorinostat property:physically_interacts_with ?l . ?l rdf:type ontology:nutrient }
[]