Simple Question (Direct)
Simple Question
Q21632546
P703
Q16521
USER
Where is adenylosuccinate lyase    HP1112 found ?
(Q21632546,P703,c(Q16521))
action filter_type
action find
entity Q21632546
relation P703
type Q16521
['Q21632546', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q16521 . resource:Q21632546 property:P703 ?i }
adenylosuccinate lyase    HP1112
action filter_type
action find
entity adenylosuccinate lyase    HP1112
relation found in taxon
type taxon
['adenylosuccinate lyase    HP1112', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:taxon . resource:adenylosuccinate_lyase____HP1112 property:found_in_taxon ?i }
[]
taxon
Q21065231
SYSTEM
Helicobacter pylori 26695
Q21065231
(Q21632546,P703,c(Q16521))
action filter_type
action find
entity Q21632546
relation P703
type Q16521
Adenylosuccinate lyase HP 1112 is found in [ANSWER]
['Q21632546', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q16521 . resource:Q21632546 property:P703 ?i }
Helicobacter pylori 26695
Adenylosuccinate lyase HP 1112 is found in Helicobacter pylori 26695
Helicobacter pylori 26695
action filter_type
action find
entity adenylosuccinate lyase    HP1112
relation found in taxon
type taxon
['adenylosuccinate lyase    HP1112', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:taxon . resource:adenylosuccinate_lyase____HP1112 property:found_in_taxon ?i }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21632546
P702
Q863908
USER
What is the gene that encodes adenylosuccinate lyase    HP1112 ?
(Q21632546,P702,c(Q863908))
action filter_type
action find
entity Q21632546
relation P702
type Q863908
['Q21632546', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?v WHERE { resource:Q21632546 property:P702 ?v . ?v rdf:type ontology:Q863908 }
adenylosuccinate lyase    HP1112
action filter_type
action find
entity adenylosuccinate lyase    HP1112
relation encoded by
type nucleic acid sequence
['adenylosuccinate lyase    HP1112', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?v WHERE { resource:adenylosuccinate_lyase____HP1112 property:encoded_by ?v . ?v rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q21629057
SYSTEM
adenylosuccinate lyase    HP1112
Q21629057
(Q21632546,P702,c(Q863908))
action filter_type
action find
entity Q21632546
relation P702
type Q863908
The gene that encodes adenylosuccinate lyase HP 1112 is also adenylosuccinate lyase HP1112
['Q21632546', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?v WHERE { resource:Q21632546 property:P702 ?v . ?v rdf:type ontology:Q863908 }
adenylosuccinate lyase    HP1112
The gene that encodes adenylosuccinate lyase HP 1112 is also adenylosuccinate lyase HP1112
adenylosuccinate lyase    HP1112
action filter_type
action find
entity adenylosuccinate lyase    HP1112
relation encoded by
type nucleic acid sequence
['adenylosuccinate lyase    HP1112', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?v WHERE { resource:adenylosuccinate_lyase____HP1112 property:encoded_by ?v . ?v rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P180
Q16521 Q340169 Q14660
USER
How many taxons are depicted in approximately 1 medias and flags ?
(c(Q340169)|c(Q14660),P180,c(Q16521))
action count
action approx
action union
action find_reverse_tuple_counts
relation P180
type Q16521
type Q340169
action find_reverse_tuple_counts
relation P180
type Q16521
type Q14660
value 1
[[{'concept': 'Q340169'}, {'concept': 'Q14660'}], 'P180', {'concept': 'Q16521'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?v ) WHERE { FILTER ( ?r = 1 ) . { SELECT DISTINCT ( COUNT ( ?j ) AS ?r ) ?t WHERE { { ?j property:P180 ?t . ?t rdf:type ontology:Q16521 . ?j rdf:type ontology:Q340169 } UNION { ?j property:P180 ?t . ?t rdf:type ontology:Q16521 . ?j rdf:type ontology:Q14660 } } GROUP BY ?t } }
action count
action approx
action union
action find_reverse_tuple_counts
relation depicts
type taxon
type media
action find_reverse_tuple_counts
relation depicts
type taxon
type flag
value 1
[[{'concept': 'media'}, {'concept': 'flag'}], 'depicts', {'concept': 'taxon'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?v ) WHERE { FILTER ( ?r = 1 ) . { SELECT DISTINCT ( COUNT ( ?j ) AS ?r ) ?t WHERE { { ?j property:depicts ?t . ?t rdf:type ontology:taxon . ?j rdf:type ontology:media } UNION { ?j property:depicts ?t . ?t rdf:type ontology:taxon . ?j rdf:type ontology:flag } } GROUP BY ?t } }
[]
taxon media flag
SYSTEM
27
Q156895 Q132826 Q36050 Q146911 Q136874 Q14560 Q25222 Q756 Q171497 Q5113 Q2102 Q133006 Q131044 Q26158 Q47542 Q80005 Q2934 Q217497 Q339803 Q2565286 Q146269 Q146 Q335992 Q12004 Q34687 Q749577 Q61105
(c(Q340169)|c(Q14660),P180,c(Q16521))
action count
action approx
action union
action find_reverse_tuple_counts
relation P180
type Q16521
type Q340169
action find_reverse_tuple_counts
relation P180
type Q16521
type Q14660
value 1
[ANSWER]
[[{'concept': 'Q340169'}, {'concept': 'Q14660'}], 'P180', {'concept': 'Q16521'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?v ) WHERE { FILTER ( ?r = 1 ) . { SELECT DISTINCT ( COUNT ( ?j ) AS ?r ) ?t WHERE { { ?j property:P180 ?t . ?t rdf:type ontology:Q16521 . ?j rdf:type ontology:Q340169 } UNION { ?j property:P180 ?t . ?t rdf:type ontology:Q16521 . ?j rdf:type ontology:Q14660 } } GROUP BY ?t } }
Betula pendula Sabal Salix Cupressus Lilium philadelphicum Cactaceae owl plant Helianthus annuus bird snake Asian elephant Cygnus atratus Bellis perennis Castor ferns goat African fish eagle Gossypium sturtianum California golden bear Populus alba cat grey-crowned crane Quercus Rosa Paradisaea raggiana Cedrus libani
27
action count
action approx
action union
action find_reverse_tuple_counts
relation depicts
type taxon
type media
action find_reverse_tuple_counts
relation depicts
type taxon
type flag
value 1
[[{'concept': 'media'}, {'concept': 'flag'}], 'depicts', {'concept': 'taxon'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?v ) WHERE { FILTER ( ?r = 1 ) . { SELECT DISTINCT ( COUNT ( ?j ) AS ?r ) ?t WHERE { { ?j property:depicts ?t . ?t rdf:type ontology:taxon . ?j rdf:type ontology:media } UNION { ?j property:depicts ?t . ?t rdf:type ontology:taxon . ?j rdf:type ontology:flag } } GROUP BY ?t } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21629057
P688
Q181394
USER
What is the nutrient encoded by adenylosuccinate lyase    HP1112 ?
(Q21629057,P688,c(Q181394))
action filter_type
action find
entity Q21629057
relation P688
type Q181394
['Q21629057', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?g WHERE { resource:Q21629057 property:P688 ?g . ?g rdf:type ontology:Q181394 }
adenylosuccinate lyase    HP1112
action filter_type
action find
entity adenylosuccinate lyase    HP1112
relation encodes
type nutrient
['adenylosuccinate lyase    HP1112', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?g WHERE { resource:adenylosuccinate_lyase____HP1112 property:encodes ?g . ?g rdf:type ontology:nutrient }
[]
nutrient
Q21632546
SYSTEM
adenylosuccinate lyase    HP1112
Q21632546
(Q21629057,P688,c(Q181394))
action filter_type
action find
entity Q21629057
relation P688
type Q181394
The nutrient encoded by adenylosuccinate lyase HP 1112 is from adenylosuccinate lyase HP1112
['Q21629057', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?g WHERE { resource:Q21629057 property:P688 ?g . ?g rdf:type ontology:Q181394 }
adenylosuccinate lyase    HP1112
The nutrient encoded by adenylosuccinate lyase HP 1112 is from adenylosuccinate lyase HP1112
adenylosuccinate lyase    HP1112
action filter_type
action find
entity adenylosuccinate lyase    HP1112
relation encodes
type nutrient
['adenylosuccinate lyase    HP1112', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?g WHERE { resource:adenylosuccinate_lyase____HP1112 property:encodes ?g . ?g rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q21632546 Q23086555
P688
Q863908
USER
Does DUF418 family putative inner membrane protein    b2152 encode that nutrient ?
(Q23086555,P688,Q21632546)
action is_in
entity Q23086555
action find
entity Q21632546
relation P688
['Q23086555', 'P688', 'Q21632546']
ASK WHERE { resource:Q21632546 property:P688 resource:Q23086555 }
adenylosuccinate lyase    HP1112 DUF418 family putative inner membrane protein    b2152
action is_in
entity DUF418 family putative inner membrane protein    b2152
action find
entity adenylosuccinate lyase    HP1112
relation encodes
['DUF418 family putative inner membrane protein    b2152', 'encodes', 'adenylosuccinate lyase    HP1112']
ASK WHERE { resource:adenylosuccinate_lyase____HP1112 property:encodes resource:DUF418_family_putative_inner_membrane_protein____b2152 }
[]
nucleic acid sequence
SYSTEM
NO
(Q23086555,P688,Q21632546)
action is_in
entity Q23086555
action find
entity Q21632546
relation P688
[ANSWER]
['Q23086555', 'P688', 'Q21632546']
ASK WHERE { resource:Q21632546 property:P688 resource:Q23086555 }
No
action is_in
entity DUF418 family putative inner membrane protein    b2152
action find
entity adenylosuccinate lyase    HP1112
relation encodes
['DUF418 family putative inner membrane protein    b2152', 'encodes', 'adenylosuccinate lyase    HP1112']
ASK WHERE { resource:adenylosuccinate_lyase____HP1112 property:encodes resource:DUF418_family_putative_inner_membrane_protein____b2152 }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q8386 Q181394
USER
Which nutrients do atleast 20 drugs and nutrients contact with ?
(c(Q8386)|c(Q181394),P129,c(Q181394))
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 20
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?s WHERE { FILTER ( ?r >= 20 ) . { SELECT DISTINCT ( COUNT ( ?h ) AS ?r ) ?s WHERE { { ?h property:P129 ?s . ?s rdf:type ontology:Q181394 . ?h rdf:type ontology:Q8386 } UNION { ?h property:P129 ?s . ?s rdf:type ontology:Q181394 . ?h rdf:type ontology:Q181394 } } GROUP BY ?s } }
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 20
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?s WHERE { FILTER ( ?r >= 20 ) . { SELECT DISTINCT ( COUNT ( ?h ) AS ?r ) ?s WHERE { { ?h property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?h rdf:type ontology:drug } UNION { ?h property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?h rdf:type ontology:nutrient } } GROUP BY ?s } }
[]
nutrient drug nutrient
Q2034004 Q1949517 Q4639596
SYSTEM
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A, 5-hydroxytryptamine receptor 2B
Q7050954 Q309513 Q287961 Q5123372 Q410142 Q288797 Q287958 Q4639596 Q4734884 Q4734887 Q21115051 Q415364 Q21109355 Q4734894 Q21110872 Q4734892 Q21108118 Q4734891 Q21115046 Q21115043 Q1949517 Q21109363 Q2034004
(c(Q8386)|c(Q181394),P129,c(Q181394))
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 20
Atleast 20 drugs and nutrients contact receptor [ANSWERS]
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?s WHERE { FILTER ( ?r >= 20 ) . { SELECT DISTINCT ( COUNT ( ?h ) AS ?r ) ?s WHERE { { ?h property:P129 ?s . ?s rdf:type ontology:Q181394 . ?h rdf:type ontology:Q8386 } UNION { ?h property:P129 ?s . ?s rdf:type ontology:Q181394 . ?h rdf:type ontology:Q181394 } } GROUP BY ?s } }
Sodium-dependent noradrenaline transporter Histamine H1 receptor Beta-2 adrenergic receptor Mu-type opioid receptor Sodium-dependent serotonin transporter 5-hydroxytryptamine receptor 1B Beta-1 adrenergic receptor 5-hydroxytryptamine receptor 2B Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor 5-hydroxytryptamine receptor 1E Prostaglandin G/H synthase 2 5-hydroxytryptamine receptor 7 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 6 D(2) dopamine receptor
Atleast 20 drugs and nutrients contact receptor D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A and 5-hydroxytryptamine receptor 2B
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 2B
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 20
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?s WHERE { FILTER ( ?r >= 20 ) . { SELECT DISTINCT ( COUNT ( ?h ) AS ?r ) ?s WHERE { { ?h property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?h rdf:type ontology:drug } UNION { ?h property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?h rdf:type ontology:nutrient } } GROUP BY ?s } }
[]
Clarification
Simple Question|Single Entity|Indirect
Q4639596
P682
Q3249551
USER
Which process is that nutrient involved in ?
(Q4639596,P682,c(Q3249551))
action filter_type
action find
entity Q4639596
relation P682
type Q3249551
['Q4639596', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?j WHERE { resource:Q4639596 property:P682 ?j . ?j rdf:type ontology:Q3249551 }
5-hydroxytryptamine receptor 2B
action filter_type
action find
entity 5-hydroxytryptamine receptor 2B
relation biological process
type process
['5-hydroxytryptamine receptor 2B', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?j WHERE { resource:5-hydroxytryptamine_receptor_2B property:biological_process ?j . ?j rdf:type ontology:process }
[]
process
Clarification for simple ques.
Q1949517
SYSTEM
Did you mean 5-hydroxytryptamine receptor 2A ?
Q2034004 Q1949517 Q4639596
(Q2034004,P682,c(Q3249551)) (Q1949517,P682,c(Q3249551)) (Q4639596,P682,c(Q3249551))
[ANSWER]
['Q2034004', 'P682', {'concept': 'Q3249551'}] ['Q1949517', 'P682', {'concept': 'Q3249551'}] ['Q4639596', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?j WHERE { resource:Q4639596 property:P682 ?j . ?j rdf:type ontology:Q3249551 }
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 2B
Did you mean 5-hydroxytryptamine receptor 2A ?
5-hydroxytryptamine receptor 2A
['D(2) dopamine receptor', 'biological process', {'concept': 'process'}] ['5-hydroxytryptamine receptor 2A', 'biological process', {'concept': 'process'}] ['5-hydroxytryptamine receptor 2B', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?j WHERE { resource:5-hydroxytryptamine_receptor_2B property:biological_process ?j . ?j rdf:type ontology:process }
[]
Simple Question (Coreferenced)
USER
No, I meant 5-hydroxytryptamine receptor 2B. Could you tell me the answer for that?
(Q4639596,P682,c(Q3249551))
Q4639596
['Q4639596', 'P682', {'concept': 'Q3249551'}]
['5-hydroxytryptamine receptor 2B', 'biological process', {'concept': 'process'}]
[]
Q9332
SYSTEM
behavior
Q9332
(Q4639596,P682,c(Q3249551))
action filter_type
action find
entity Q4639596
relation P682
type Q3249551
That nutrient is involved in [ANSWER]
['Q4639596', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?j WHERE { resource:Q4639596 property:P682 ?j . ?j rdf:type ontology:Q3249551 }
behavior
That nutrient is involved in behavior
behavior
action filter_type
action find
entity 5-hydroxytryptamine receptor 2B
relation biological process
type process
['5-hydroxytryptamine receptor 2B', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?j WHERE { resource:5-hydroxytryptamine_receptor_2B property:biological_process ?j . ?j rdf:type ontology:process }
[]