Simple Question (Direct)
Simple Question
Q23481027
P702
Q863908
USER
What is the gene that encodes alkyl hydroperoxide reductase    SE2357 ?
(Q23481027,P702,c(Q863908))
action filter_type
action find
entity Q23481027
relation P702
type Q863908
['Q23481027', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q23481027 property:P702 ?c . ?c rdf:type ontology:Q863908 }
alkyl hydroperoxide reductase    SE2357
action filter_type
action find
entity alkyl hydroperoxide reductase    SE2357
relation encoded by
type nucleic acid sequence
['alkyl hydroperoxide reductase    SE2357', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:alkyl_hydroperoxide_reductase____SE2357 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23178745
SYSTEM
alkyl hydroperoxide reductase    SE2357
Q23178745
(Q23481027,P702,c(Q863908))
action filter_type
action find
entity Q23481027
relation P702
type Q863908
The gene that encodes alkyl hydroperoxide reductase SE2357 is codes alkyl hydroperoxide reductase SE2357
['Q23481027', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q23481027 property:P702 ?c . ?c rdf:type ontology:Q863908 }
alkyl hydroperoxide reductase    SE2357
The gene that encodes alkyl hydroperoxide reductase SE2357 is codes alkyl hydroperoxide reductase SE2357
alkyl hydroperoxide reductase    SE2357
action filter_type
action find
entity alkyl hydroperoxide reductase    SE2357
relation encoded by
type nucleic acid sequence
['alkyl hydroperoxide reductase    SE2357', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:alkyl_hydroperoxide_reductase____SE2357 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23481027
P682
Q1057
USER
What is the metabolic process that alkyl hydroperoxide reductase    SE2357 is involved in ?
(Q23481027,P682,c(Q1057))
action filter_type
action find
entity Q23481027
relation P682
type Q1057
['Q23481027', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?v WHERE { resource:Q23481027 property:P682 ?v . ?v rdf:type ontology:Q1057 }
alkyl hydroperoxide reductase    SE2357
action filter_type
action find
entity alkyl hydroperoxide reductase    SE2357
relation biological process
type metabolic process
['alkyl hydroperoxide reductase    SE2357', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?v WHERE { resource:alkyl_hydroperoxide_reductase____SE2357 property:biological_process ?v . ?v rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q23481027,P682,c(Q1057))
action filter_type
action find
entity Q23481027
relation P682
type Q1057
The metabolic process that alkyl hydroperoxide reductase SE2357 is involved in is p [ANSWER]
['Q23481027', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?v WHERE { resource:Q23481027 property:P682 ?v . ?v rdf:type ontology:Q1057 }
oxidation-reduction process
The metabolic process that alkyl hydroperoxide reductase SE2357 is involved in is p oxidation-reduction process
oxidation-reduction process
action filter_type
action find
entity alkyl hydroperoxide reductase    SE2357
relation biological process
type metabolic process
['alkyl hydroperoxide reductase    SE2357', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?v WHERE { resource:alkyl_hydroperoxide_reductase____SE2357 property:biological_process ?v . ?v rdf:type ontology:metabolic_process }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q27470341
Q1057
USER
And how about hydroxylamine reductase    NRG857_03945?
(Q27470341,P682,c(Q1057))
action filter_type
action find
entity Q27470341
relation P682
type Q1057
['Q27470341', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:Q1057 . resource:Q27470341 property:P682 ?d }
hydroxylamine reductase    NRG857_03945
action filter_type
action find
entity hydroxylamine reductase    NRG857_03945
relation biological process
type metabolic process
['hydroxylamine reductase    NRG857_03945', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:metabolic_process . resource:hydroxylamine_reductase____NRG857_03945 property:biological_process ?d }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q27470341,P682,c(Q1057))
action filter_type
action find
entity Q27470341
relation P682
type Q1057
[ANSWER]
['Q27470341', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:Q1057 . resource:Q27470341 property:P682 ?d }
oxidation-reduction process
oxidation-reduction process
action filter_type
action find
entity hydroxylamine reductase    NRG857_03945
relation biological process
type metabolic process
['hydroxylamine reductase    NRG857_03945', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:metabolic_process . resource:hydroxylamine_reductase____NRG857_03945 property:biological_process ?d }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type
Q21126777
P129
Q8386 Q181394 Q181394
USER
How many nutrients interacts with lesser number of drugs and nutrients than P2Y purinoceptor 2 ?
(c(Q181394),P129,c(Q8386)|c(Q181394))
action count
action less
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find
entity Q21126777
relation P129
type Q8386
type Q181394
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ( COUNT ( ?c ) AS ?f ) WHERE { FILTER ( ?j < ?a ) . { SELECT DISTINCT ( COUNT ( ?r ) AS ?a ) WHERE { { VALUES ( ?z ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } . ?r rdf:type ?z } . resource:Q21126777 property:P129 ?r } } . { SELECT DISTINCT ?c ( COUNT ( ?o ) AS ?j ) WHERE { VALUES ( ?m ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?o rdf:type ?m } GROUP BY ?c } }
P2Y purinoceptor 2
action count
action less
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find
entity P2Y purinoceptor 2
relation physically interacts with
type drug
type nutrient
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ( COUNT ( ?c ) AS ?f ) WHERE { FILTER ( ?j < ?a ) . { SELECT DISTINCT ( COUNT ( ?r ) AS ?a ) WHERE { { VALUES ( ?z ) { ( ontology:nutrient ) ( ontology:drug ) } . ?r rdf:type ?z } . resource:P2Y_purinoceptor_2 property:physically_interacts_with ?r } } . { SELECT DISTINCT ?c ( COUNT ( ?o ) AS ?j ) WHERE { VALUES ( ?m ) { ( ontology:drug ) ( ontology:nutrient ) } . ?o rdf:type ?m } GROUP BY ?c } }
[]
drug nutrient nutrient
SYSTEM
528
Q21135479 Q21987720 Q5635781 Q22679043 Q21494718 Q21115210 Q5018799 Q21115219 Q14872770 Q21119831 Q21119830 Q4217286 Q21108693 Q12746346 Q21108695 Q21123087 Q21988043 Q21127094 Q21985448 Q21119231 Q21115284 Q21172741 Q413209 Q420930 Q21110295 Q21111688 Q1407929 Q21173169 Q14908176 Q21107052 Q21119836 Q21118791 Q21108135 Q21111175 Q21125451 Q21147674 Q21113310 Q21113312 Q21113313 Q21113314 Q21113317 Q409166 Q21113170 Q21113172 Q1947065 Q15335226 Q21113176 Q21118071 Q2463389 Q21126314 Q14864142 Q4042017 Q15323688 Q21496155 Q6590338 Q7073181 Q21108789 Q21107107 Q4216080 Q21156475 Q7317662 Q4048886 Q22675842 Q14911986 Q21100441 Q7202245 Q21113552 Q21137668 Q21114547 Q21100658 Q1552797 Q14865158 Q21110488 Q21117208 Q21102756 Q906403 Q3609382 Q21990430 Q21105011 Q4789587 Q21981115 Q401536 Q420604 Q258915 Q21126218 Q21130085 Q21135448 Q21135449 Q21173374 Q21108357 Q21126214 Q21156663 Q5500227 Q21118967 Q6589868 Q21108408 Q21118678 Q21984552 Q21123083 Q21984557 Q7861688 Q21118909 Q7923221 Q21106653 Q7169504 Q21118293 Q21130016 Q21136517 Q21111689 Q908221 Q21496578 Q5323823 Q21496575 Q21496576 Q21109253 Q21100773 Q21100774 Q21988044 Q21107535 Q2042529 Q21114341 Q21985924 Q21988816 Q14905576 Q21113326 Q14905270 Q21984063 Q14911929 Q21122125 Q4812911 Q21103089 Q21112081 Q21172213 Q14914580 Q4459747 Q511968 Q21102129 Q21130042 Q5198252 Q21109744 Q21123723 Q5198256 Q21124458 Q21107884 Q21123236 Q21111742 Q21123239 Q15324125 Q7275807 Q2640417 Q21125231 Q21117805 Q21110296 Q21100472 Q21123725 Q21123722 Q21107891 Q21155668 Q1147372 Q5514576 Q7671473 Q22677568 Q15327635 Q21119824 Q21980258 Q21119826 Q2385013 Q5419640 Q21494502 Q22680153 Q21114166 Q7671499 Q14913392 Q21116513 Q21104645 Q21499436 Q21115906 Q408853 Q21119851 Q21130460 Q21102588 Q5611730 Q21097266 Q5512777 Q21118785 Q21154430 Q21173746 Q21125466 Q412483 Q420766 Q21496383 Q21113719 Q1493174 Q11071131 Q21139471 Q21497887 Q21113101 Q21113100 Q424031 Q21110304 Q3459294 Q21114338 Q21497941 Q21102511 Q21119672 Q21202200 Q21132140 Q21118732 Q21126779 Q21126773 Q419999 Q21135949 Q21096262 Q21105660 Q21991514 Q21135943 Q21135945 Q21991512 Q21117235 Q21108844 Q21113155 Q21981993 Q21171763 Q21494387 Q4650061 Q21119704 Q21112691 Q15322943 Q21499097 Q21105060 Q21114807 Q21125240 Q21208052 Q21987569 Q21173156 Q21121807 Q21124061 Q21118356 Q4822491 Q21117300 Q21126205 Q21108578 Q21113173 Q21120142 Q21110921 Q411978 Q21106540 Q288382 Q4036865 Q21111184 Q21983261 Q21111182 Q21111181 Q4859538 Q21102300 Q3931282 Q21139123 Q14891582 Q21109298 Q21496918 Q21106795 Q21117407 Q21113926 Q21110752 Q408305 Q21097237 Q21114574 Q21112525 Q21118072 Q14911895 Q3721138 Q7251483 Q21113330 Q5419638 Q21113337 Q21156191 Q21108487 Q21110901 Q21104817 Q14914570 Q21113158 Q21135903 Q21107088 Q21113152 Q21103337 Q21103323 Q21102136 Q21145932 Q21173215 Q21123245 Q5014947 Q21123246 Q5512833 Q5500223 Q21132248 Q21114845 Q423572 Q422579 Q21499210 Q21100464 Q15323346 Q21112674 Q21988035 Q21105636 Q21126242 Q21991520 Q21126786 Q7117825 Q21115989 Q5572421 Q21107443 Q7117823 Q21497124 Q21123241 Q6590408 Q21118919 Q21497128 Q5198254 Q21132652 Q6594119 Q21119694 Q7136149 Q21111879 Q21125249 Q21988026 Q21988024 Q7671460 Q7671461 Q21173504 Q7671469 Q12746382 Q21100975 Q21121368 Q21106693 Q21119848 Q21497155 Q5464652 Q7671464 Q21126833 Q356093 Q21119847 Q21121466 Q21110933 Q6714411 Q7118491 Q13566123 Q21979519 Q21135411 Q21990458 Q22676780 Q21120698 Q21113274 Q7120326 Q21113278 Q21113115 Q21113504 Q21989670 Q418404 Q6881891 Q21497874 Q21127300 Q2083074 Q21111553 Q21108161 Q21124401 Q4897285 Q21111495 Q21123752 Q21172884 Q21172886 Q21122109 Q6534535 Q21140676 Q311568 Q1436420 Q21121716 Q6590443 Q21130508 Q21132789 Q21123216 Q21106691 Q6981557 Q22679008 Q5198250 Q21113831 Q14914198 Q4377404 Q4822488 Q21119843 Q21116933 Q315860 Q21119827 Q5014193 Q21172286 Q21114819 Q288395 Q21120144 Q6714959 Q22678664 Q5446457 Q5446456 Q21106737 Q14914104 Q3271142 Q21992684 Q21119816 Q10988613 Q21102593 Q5014192 Q21114585 Q21102123 Q21108517 Q565672 Q21154413 Q21113832 Q5611755 Q21123416 Q21111517 Q21988152 Q21982871 Q21122433 Q21122435 Q3162114 Q21984578 Q21113305 Q21133205 Q21119825 Q21113169 Q21113168 Q21113161 Q21172271 Q21131101 Q5014958 Q21119822 Q21172800 Q5014957 Q415718 Q7455513 Q21123251 Q21119591 Q21114857 Q21100450 Q21100324 Q21114850 Q21982203 Q21132247 Q21113540 Q21150595 Q21106448 Q21987287 Q7119501 Q21115996 Q21118578 Q21115992 Q21109157 Q21115998 Q21201618 Q21118676 Q21118677 Q21108701 Q21988427 Q21991039 Q411791 Q14905763 Q21118884 Q425201 Q9020944 Q21121379 Q21112289 Q21157860 Q7671478 Q21113099 Q21118970 Q21126947 Q416336 Q21113295 Q21113297 Q21110922 Q21113292 Q21173608 Q21136134 Q21129997 Q21107799 Q423628 Q21113349 Q21494464 Q21121276 Q7120338 Q21983336 Q21113510 Q21100810 Q424693 Q21123223 Q288431 Q21107871 Q6589190 Q21097216 Q7671497 Q21122509 Q6449562 Q21111520 Q7390572 Q6155967 Q21114955 Q5201183 Q21984381 Q415762 Q6714402 Q21499447 Q15324415 Q21135787 Q15323565 Q571999 Q21495791 Q2005209 Q21100886 Q21115429 Q22683566 Q7002508 Q21121490 Q2356259 Q21121496 Q21123220 Q21113683 Q6981560 Q414401 Q21113127 Q21986206
(c(Q181394),P129,c(Q8386)|c(Q181394))
action count
action less
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find
entity Q21126777
relation P129
type Q8386
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ( COUNT ( ?c ) AS ?f ) WHERE { FILTER ( ?j < ?a ) . { SELECT DISTINCT ( COUNT ( ?r ) AS ?a ) WHERE { { VALUES ( ?z ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } . ?r rdf:type ?z } . resource:Q21126777 property:P129 ?r } } . { SELECT DISTINCT ?c ( COUNT ( ?o ) AS ?j ) WHERE { VALUES ( ?m ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?o rdf:type ?m } GROUP BY ?c } }
Sodium channel protein type 8 subunit alpha Mas-related G-protein coupled receptor member D GTPase HRas Aldose reductase Lysophosphatidic acid receptor 2 ATP-binding cassette sub-family A member 1 Calcium-activated potassium channel subunit alpha-1 Oxysterols receptor LXR-beta Histamine H4 receptor Potassium voltage-gated channel subfamily H member 5 Potassium channel subfamily K member 18 Cathepsin S G-protein coupled receptor 87 Nociceptin receptor G-protein coupled receptor 84 Neuromedin-K receptor Sphingosine 1-phosphate receptor 4 Rho-associated protein kinase 2 Hydroxycarboxylic acid receptor 1 Tyrosine-protein kinase TXK Activated CDC42 kinase 1 G-protein coupled receptor 3 Transient receptor potential cation channel subfamily V member 1 Glutathione reductase, mitochondrial Galanin receptor type 2 B2 bradykinin receptor Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Transient receptor potential cation channel subfamily V member 1 Gap junction alpha-4 protein Small conductance calcium-activated potassium channel protein 1 Multidrug resistance-associated protein 5 Neuronal acetylcholine receptor subunit alpha-10 Neuronal acetylcholine receptor subunit alpha-3 Tryptophan 5-hydroxylase 1 Estrogen-related receptor gamma Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit beta-3 Gamma-aminobutyric acid receptor subunit rho-2 Gamma-aminobutyric acid receptor subunit beta-2 Gamma-aminobutyric acid receptor subunit epsilon Prothrombin Gap junction delta-3 protein Gap junction delta-4 protein Voltage-dependent N-type calcium channel subunit alpha-1B D(2) dopamine receptor Gap junction delta-2 protein Steroid hormone receptor ERR2 Tyrosine-protein kinase Lyn Sodium channel protein type 1 subunit alpha 3-hydroxy-3-methylglutaryl-coenzyme A reductase GTPase KRas Transient receptor potential cation channel subfamily V member 2 Bromodomain testis-specific protein Metabotropic glutamate receptor 7 2-oxoglutarate receptor 1 Potassium voltage-gated channel subfamily KQT member 5 Gap junction alpha-3 protein 72 kDa type IV collagenase Hydroxycarboxylic acid receptor 3 Nuclear receptor subfamily 1 group D member 2 3-oxo-5-alpha-steroid 4-dehydrogenase 2 Rhodopsin kinase Nociceptin receptor Bromodomain-containing protein 4 Platelet-activating factor receptor ATP-sensitive inward rectifier potassium channel 14 Fibroblast growth factor receptor 4 Nitric oxide synthase, inducible Rho-associated protein kinase 1 Heat-stable enterotoxin receptor Potassium voltage-gated channel subfamily KQT member 1 Serine/threonine-protein kinase BRSK2 Chymotrypsin-like elastase family member 1 Testis-specific serine/threonine-protein kinase 1 Protein kinase C zeta type Cytochrome P450 11B2, mitochondrial P2Y purinoceptor 14 cGMP-dependent 3',5'-cyclic phosphodiesterase Vasopressin V1b receptor G-protein coupled receptor 6 Tyrosine-protein kinase Blk Phenylalanine-4-hydroxylase Renin Folate transporter 1 Mitogen-activated protein kinase kinase kinase kinase 5 Sodium channel protein type 2 subunit alpha Sodium channel protein type 3 subunit alpha Plasminogen Cystine/glutamate transporter Sphingosine 1-phosphate receptor 1 Mitogen-activated protein kinase 11 Free fatty acid receptor 3 G-protein coupled receptor 183 Metabotropic glutamate receptor 6 H(+)/Cl(-) exchange transporter 3 Melanocortin receptor 3 Potassium voltage-gated channel subfamily A member 3 Substance-K receptor Potassium voltage-gated channel subfamily D member 1 Non-receptor tyrosine-protein kinase TYK2 Ovarian cancer G-protein coupled receptor 1 Vesicular acetylcholine transporter Solute carrier family 23 member 1 Peroxisome proliferator-activated receptor delta Hydroxymethylglutaryl-CoA synthase, cytoplasmic Serine/threonine-protein kinase PAK 2 Zinc-activated ligand-gated ion channel B1 bradykinin receptor Indoleamine 2,3-dioxygenase 1 Lysophosphatidic acid receptor 3 Histone acetyltransferase p300 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Protein kinase C iota type Chloride transport protein 6 H(+)/Cl(-) exchange transporter 7 Sphingosine 1-phosphate receptor 3 Dual specificity mitogen-activated protein kinase kinase 6 Toll-like receptor 9 Excitatory amino acid transporter 3 P2X purinoceptor 4 Neuropeptide S receptor Thromboxane A2 receptor Gamma-aminobutyric acid receptor subunit gamma-1 Thyrotropin-releasing hormone receptor G-protein coupled receptor family C group 6 member A Mu-type opioid receptor Serine palmitoyltransferase 3 Serine/threonine-protein kinase ATR Homeodomain-interacting protein kinase 1 Gap junction gamma-3 protein Solute carrier family 22 member 1 Short transient receptor potential channel 6 Toll-like receptor 8 Cyclin-dependent kinase 2 Voltage-dependent T-type calcium channel subunit alpha-1H Carbonyl reductase [NADPH] 1 Cyclin-dependent kinase 6 Dual specificity mitogen-activated protein kinase kinase 7 Pannexin-2 Cyclin-dependent kinase 9 Sodium-dependent neutral amino acid transporter B(0)AT2 Potassium voltage-gated channel subfamily B member 1 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform Complement C1r subcomponent Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' Transient receptor potential cation channel subfamily V member 4 Nuclear receptor ROR-alpha Aldehyde dehydrogenase, mitochondrial Solute carrier organic anion transporter family member 1A2 cAMP-specific 3',5'-cyclic phosphodiesterase 4A Galanin receptor type 3 Bromodomain testis-specific protein Pannexin-1 Pannexin-3 Potassium voltage-gated channel subfamily D member 1 Death-associated protein kinase 1 Cyclin-dependent kinase 1 Glycogen synthase kinase-3 beta Short transient receptor potential channel 7 Corticotropin-releasing factor receptor 1 Transient receptor potential cation channel subfamily M member 7 G protein-activated inward rectifier potassium channel 2 Short transient receptor potential channel 2 G protein-activated inward rectifier potassium channel 1 Translocator protein Excitatory amino acid transporter 5 G-protein coupled receptor 35 Ornithine decarboxylase Hepatocyte nuclear factor 4-alpha Transient receptor potential cation channel subfamily V member 3 Prostaglandin D2 receptor Serine/threonine-protein kinase 4 Dual specificity mitogen-activated protein kinase kinase 4 Muscarinic acetylcholine receptor M1 Poly [ADP-ribose] polymerase 2 Nitric oxide synthase, endothelial Potassium channel subfamily K member 4 Methionine aminopeptidase 2 Sn1-specific diacylglycerol lipase beta Growth hormone-releasing hormone receptor Angiopoietin-1 receptor Gamma-aminobutyric acid receptor subunit alpha-4 Mas-related G-protein coupled receptor member D Lysophosphatidic acid receptor 4 Melanocyte-stimulating hormone receptor Tryptophan 5-hydroxylase 2 Cholesterol side-chain cleavage enzyme, mitochondrial Tyrosine 3-monooxygenase Gastrin/cholecystokinin type B receptor NAD-dependent protein deacetylase sirtuin-1 Vitamin K-dependent gamma-carboxylase Glucagon-like peptide 2 receptor Mitogen-activated protein kinase 10 G protein-activated inward rectifier potassium channel 1 Gap junction beta-6 protein Gap junction beta-5 protein Mevalonate kinase Galanin receptor type 1 Sodium channel protein type 5 subunit alpha Excitatory amino acid transporter 2 5-hydroxytryptamine receptor 4 Platelet-derived growth factor receptor alpha Phosphatidylinositol 4-kinase type 2-beta cAMP-specific 3',5'-cyclic phosphodiesterase 4C Aurora kinase C Maltase-glucoamylase, intestinal P2Y purinoceptor 4 Putative P2Y purinoceptor 10 Transthyretin Solute carrier family 22 member 11 Sodium leak channel non-selective protein Cyclic nucleotide-gated cation channel alpha-3 Trace amine-associated receptor 3 Solute carrier family 22 member 8 Solute carrier family 22 member 12 Trace amine-associated receptor 5 Nuclear receptor ROR-beta P2X purinoceptor 4 Gap junction gamma-1 protein fMet-Leu-Phe receptor G-protein coupled receptor 12 Steroid hormone receptor ERR1 Bile salt export pump Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Beta-adrenergic receptor kinase 2 Short transient receptor potential channel 4 Retinoic acid receptor RXR-alpha Aldo-keto reductase family 1 member C3 Lysine-specific demethylase 7A Solute carrier organic anion transporter family member 2A1 Sodium/myo-inositol cotransporter ATP-sensitive inward rectifier potassium channel 15 Bcl-2-like protein 1 P2Y purinoceptor 14 Neurotensin receptor type 1 Calcium/calmodulin-dependent protein kinase type II subunit gamma Aurora kinase B Cytochrome P450 3A5 Sphingosine 1-phosphate receptor 4 Squalene synthase Gap junction beta-4 protein Neuropeptide Y receptor type 1 Uracil nucleotide/cysteinyl leukotriene receptor Thromboxane A2 receptor Geranylgeranyl pyrophosphate synthase Histamine H4 receptor Discoidin domain-containing receptor 2 Neuronal acetylcholine receptor subunit alpha-9 Platelet-derived growth factor receptor beta Neuronal acetylcholine receptor subunit alpha-6 Neuronal acetylcholine receptor subunit alpha-2 Metabotropic glutamate receptor 2 C-C chemokine receptor type 4 Calcitonin receptor Lysophosphatidic acid receptor 2 Transient receptor potential cation channel subfamily V member 6 Protein kinase C epsilon type Lysophosphatidic acid receptor 1 cAMP-specific 3',5'-cyclic phosphodiesterase 4D Serine/threonine-protein kinase 24 Cholecystokinin receptor type A Cytochrome P450 2J2 Steroid 17-alpha-hydroxylase/17,20 lyase Aromatic-L-amino-acid decarboxylase Gamma-aminobutyric acid receptor subunit beta-1 Serine/threonine-protein kinase N1 Steroid hormone receptor ERR1 Thymidylate synthase Neutrophil elastase Interferon-induced, double-stranded RNA-activated protein kinase Gamma-aminobutyric acid receptor subunit gamma-3 Excitatory amino acid transporter 4 Gamma-aminobutyric acid receptor subunit theta Cyclin-dependent kinase 19 Parathyroid hormone/parathyroid hormone-related peptide receptor Gastrin/cholecystokinin type B receptor Receptor tyrosine-protein kinase erbB-4 Transient receptor potential cation channel subfamily M member 6 Gap junction alpha-8 protein Vasoactive intestinal polypeptide receptor 1 Gap junction alpha-10 protein Gap junction alpha-5 protein Two pore calcium channel protein 1 Two pore calcium channel protein 2 Retinoic acid receptor RXR-beta Phospholipase D2 Serine/threonine-protein kinase 3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A Cytochrome P450 1B1 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C Cyclin-G-associated kinase Free fatty acid receptor 2 G protein-coupled receptor kinase 6 Protein kinase C gamma type Tyrosine-protein kinase BTK Insulin receptor Carbonic anhydrase 13 Bromodomain-containing protein 3 Nuclear receptor subfamily 1 group D member 1 Poly [ADP-ribose] polymerase 1 Sphingosine 1-phosphate receptor 5 cGMP-gated cation channel alpha-1 Sphingosine 1-phosphate receptor 5 Trace amine-associated receptor 1 P2X purinoceptor 7 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 Excitatory amino acid transporter 1 N-formyl peptide receptor 2 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform B2 bradykinin receptor Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B Metabotropic glutamate receptor 8 P2X purinoceptor 1 B1 bradykinin receptor Cyclin-dependent kinase 8 Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Parathyroid hormone 2 receptor Potassium voltage-gated channel subfamily A member 2 Solute carrier organic anion transporter family member 1C1 Sphingosine 1-phosphate receptor 2 Sphingosine 1-phosphate receptor 1 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Interstitial collagenase Short transient receptor potential channel 6 Oxoeicosanoid receptor 1 Macrophage colony-stimulating factor 1 receptor Sodium- and chloride-dependent GABA transporter 1 Cytoplasmic tyrosine-protein kinase BMX Potassium channel subfamily K member 9 Voltage-dependent L-type calcium channel subunit alpha-1S Follicle-stimulating hormone receptor Short transient receptor potential channel 4 Polycystic kidney disease 2-like 1 protein Adenosine deaminase Potassium channel subfamily K member 12 Sphingosine 1-phosphate receptor 2 Probable G-protein coupled receptor 63 Mitogen-activated protein kinase 8 Histone acetyltransferase KAT2B Neuropeptide FF receptor 2 Equilibrative nucleoside transporter 1 Multidrug and toxin extrusion protein 2 Prostaglandin F2-alpha receptor Neuronal acetylcholine receptor subunit alpha-7 P2Y purinoceptor 6 Fatty-acid amide hydrolase 1 cAMP-dependent protein kinase catalytic subunit alpha Fatty-acid amide hydrolase 2 Gap junction beta-1 protein Inward rectifier potassium channel 13 DNA topoisomerase 2-alpha C-C chemokine receptor type 5 Mitogen-activated protein kinase 9 Potassium channel subfamily U member 1 Serine/threonine-protein kinase 10 Aquaporin-1 Solute carrier family 22 member 6 Lysine-specific histone demethylase 1A Solute carrier family 15 member 1 Beta-adrenergic receptor kinase 1 Calcium/calmodulin-dependent protein kinase type II subunit beta Serine/threonine-protein kinase pim-2 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Serine palmitoyltransferase 2 Leukotriene B4 receptor 2 Histone deacetylase 11 Histamine H2 receptor Xanthine dehydrogenase/oxidase Nitric oxide synthase, brain Oxytocin receptor Inhibitor of nuclear factor kappa-B kinase subunit alpha Chloride channel protein ClC-Kb Serine/threonine-protein kinase N2 Tyrosine-protein kinase FRK Sodium channel protein type 4 subunit alpha Cathepsin K Cyclin-dependent kinase 4 Type-2 angiotensin II receptor Trifunctional purine biosynthetic protein adenosine-3 Presenilin-1 Aurora kinase A Small conductance calcium-activated potassium channel protein 2 Cyclin-dependent-like kinase 5 Calcitonin Potassium channel subfamily K member 10 Casein kinase I isoform delta Brain-specific angiogenesis inhibitor 1 Lysine-specific demethylase 2A Histamine H3 receptor Neuropeptide Y receptor type 2 Mucolipin-1 Ceramide glucosyltransferase Fibroblast growth factor receptor 3 Fibroblast growth factor receptor 2 Proteinase-activated receptor 1 Toll-like receptor 4 Cytochrome P450 2D6 Vascular endothelial growth factor receptor 3 Potassium channel subfamily K member 3 Leukotriene B4 receptor 1 Sn1-specific diacylglycerol lipase alpha Casein kinase I isoform epsilon Gamma-aminobutyric acid receptor subunit alpha-6 Voltage-dependent T-type calcium channel subunit alpha-1G TRAF2 and NCK-interacting protein kinase Lysosomal alpha-glucosidase Cathepsin Z Adhesion G protein-coupled receptor G3 Growth hormone secretagogue receptor type 1 Sodium/hydrogen exchanger 5 cAMP-dependent protein kinase catalytic subunit beta Serine palmitoyltransferase 1 Glucocorticoid receptor Orexin receptor type 1 Orexin receptor type 2 Tyrosine-protein kinase JAK2 Potassium voltage-gated channel subfamily D member 2 Gamma-aminobutyric acid receptor subunit gamma-2 Mas-related G-protein coupled receptor member X1 G protein-activated inward rectifier potassium channel 4 Gap junction beta-7 protein Gap junction gamma-2 protein Gap junction alpha-9 protein Platelet-activating factor acetylhydrolase Membrane primary amine oxidase Cytochrome P450 2B6 Inward rectifier potassium channel 4 Free fatty acid receptor 4 Cytochrome P450 2C8 C-X-C chemokine receptor type 4 Serum amyloid P-component cAMP-specific 3',5'-cyclic phosphodiesterase 7B Neurotensin receptor type 2 Protein kinase C eta type Bromodomain-containing protein 2 Serine/threonine-protein kinase pim-1 Protein kinase C beta type Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 G protein-coupled receptor kinase 4 Calcium/calmodulin-dependent protein kinase type 1D Cannabinoid receptor 2 Aquaporin-9 Neuromedin-K receptor Protein kinase C alpha type Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 Potassium channel subfamily T member 2 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform Serine/threonine-protein kinase PLK4 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Neuronal acetylcholine receptor subunit alpha-4 Melanocortin receptor 4 Melanocortin receptor 5 Glutamate receptor ionotropic, kainate 1 Prostacyclin receptor Multidrug and toxin extrusion protein 2 Arachidonate 5-lipoxygenase Inward rectifier potassium channel 2 Niemann-Pick C1-like protein 1 Apoptosis regulator Bcl-2 Tyrosine-protein kinase Lck Sodium/myo-inositol cotransporter 2 Oxysterols receptor LXR-alpha Cystathionine gamma-lyase Transient receptor potential cation channel subfamily M member 1 Gap junction beta-3 protein G-protein coupled receptor 143 GTPase NRas Antithrombin-III Gamma-aminobutyric acid receptor subunit pi Gamma-aminobutyric acid receptor subunit delta N-arachidonyl glycine receptor Gamma-aminobutyric acid receptor subunit rho-3 Peptidyl-prolyl cis-trans isomerase A Solute carrier organic anion transporter family member 3A1 Atypical chemokine receptor 3 Inositol 1,4,5-trisphosphate receptor type 2 Tyrosine-protein kinase Fyn Metabotropic glutamate receptor 4 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor Proton-coupled amino acid transporter 1 Protein kinase C delta type Histamine H3 receptor ATP-sensitive inward rectifier potassium channel 10 Chloride channel protein ClC-Ka Pancreatic triacylglycerol lipase High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B Metabotropic glutamate receptor 1 Potassium voltage-gated channel subfamily A member 6 Metabotropic glutamate receptor 5 Tyrosine-protein kinase Yes Transient receptor potential cation channel subfamily V member 2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform Potassium voltage-gated channel subfamily KQT member 3 Chloride channel protein 1 Small conductance calcium-activated potassium channel protein 3 Tyrosine-protein kinase JAK1 3-phosphoinositide-dependent protein kinase 1 Cystathionine beta-synthase Voltage-dependent L-type calcium channel subunit alpha-1D Dopamine beta-hydroxylase Mitogen-activated protein kinase 14 Muscarinic acetylcholine receptor M2 Transient receptor potential cation channel subfamily M member 8 Tubulin beta-3 chain Transient receptor potential cation channel subfamily M member 5 Inhibitor of nuclear factor kappa-B kinase subunit beta Metabotropic glutamate receptor 5 Insulin-like growth factor 1 receptor Lanosterol 14-alpha demethylase High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Histone lysine demethylase PHF8 Neuropeptide FF receptor 1 Sphingosine 1-phosphate receptor 3 Gap junction alpha-1 protein Phosphatidylinositol 4-kinase type 2-alpha High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A ATP-binding cassette sub-family G member 2 Sodium channel protein type 9 subunit alpha Purine nucleoside phosphorylase Gap junction beta-2 protein Neurotensin receptor type 2
528
action count
action less
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find
entity P2Y purinoceptor 2
relation physically interacts with
type drug
type nutrient
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ( COUNT ( ?c ) AS ?f ) WHERE { FILTER ( ?j < ?a ) . { SELECT DISTINCT ( COUNT ( ?r ) AS ?a ) WHERE { { VALUES ( ?z ) { ( ontology:nutrient ) ( ontology:drug ) } . ?r rdf:type ?z } . resource:P2Y_purinoceptor_2 property:physically_interacts_with ?r } } . { SELECT DISTINCT ?c ( COUNT ( ?o ) AS ?j ) WHERE { VALUES ( ?m ) { ( ontology:drug ) ( ontology:nutrient ) } . ?o rdf:type ?m } GROUP BY ?c } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q23481027
P703
Q631147
USER
How many infraspecific names are alkyl hydroperoxide reductase    SE2357 found ?
(Q23481027,P703,c(Q631147))
action count
action filter_type
action find
entity Q23481027
relation P703
type Q631147
['Q23481027', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?j ) WHERE { resource:Q23481027 property:P703 ?w . ?w rdf:type ontology:Q631147 }
alkyl hydroperoxide reductase    SE2357
action count
action filter_type
action find
entity alkyl hydroperoxide reductase    SE2357
relation found in taxon
type infraspecific name
['alkyl hydroperoxide reductase    SE2357', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?j ) WHERE { resource:alkyl_hydroperoxide_reductase____SE2357 property:found_in_taxon ?w . ?w rdf:type ontology:infraspecific_name }
[]
infraspecific name
SYSTEM
1
Q21102957
(Q23481027,P703,c(Q631147))
action count
action filter_type
action find
entity Q23481027
relation P703
type Q631147
[ANSWER]
['Q23481027', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?j ) WHERE { resource:Q23481027 property:P703 ?w . ?w rdf:type ontology:Q631147 }
Staphylococcus epidermidis ATCC 12228
1
action count
action filter_type
action find
entity alkyl hydroperoxide reductase    SE2357
relation found in taxon
type infraspecific name
['alkyl hydroperoxide reductase    SE2357', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?j ) WHERE { resource:alkyl_hydroperoxide_reductase____SE2357 property:found_in_taxon ?w . ?w rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q27544851
P703
Q631147
USER
And also tell me about calcineurin catalytic subunit A YML057W?
(Q27544851,P703,c(Q631147))
action count
action filter_type
action find
entity Q27544851
relation P703
type Q631147
['Q27544851', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?k ) WHERE { ?h rdf:type ontology:Q631147 . resource:Q27544851 property:P703 ?h }
calcineurin catalytic subunit A YML057W
action count
action filter_type
action find
entity calcineurin catalytic subunit A YML057W
relation found in taxon
type infraspecific name
['calcineurin catalytic subunit A YML057W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?k ) WHERE { ?h rdf:type ontology:infraspecific_name . resource:calcineurin_catalytic_subunit_A_YML057W property:found_in_taxon ?h }
[]
infraspecific name
SYSTEM
1
Q27510868
(Q27544851,P703,c(Q631147))
action count
action filter_type
action find
entity Q27544851
relation P703
type Q631147
[ANSWER]
['Q27544851', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?k ) WHERE { ?h rdf:type ontology:Q631147 . resource:Q27544851 property:P703 ?h }
Saccharomyces cerevisiae S288c
1
action count
action filter_type
action find
entity calcineurin catalytic subunit A YML057W
relation found in taxon
type infraspecific name
['calcineurin catalytic subunit A YML057W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?k ) WHERE { ?h rdf:type ontology:infraspecific_name . resource:calcineurin_catalytic_subunit_A_YML057W property:found_in_taxon ?h }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q24146701
Q631147
USER
And also tell me about hypothetical protein    ECUMN_2563?
(Q24146701,P703,c(Q631147))
action count
action filter_type
action find
entity Q24146701
relation P703
type Q631147
['Q24146701', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?k ) WHERE { resource:Q24146701 property:P703 ?s . ?s rdf:type ontology:Q631147 }
hypothetical protein    ECUMN_2563
action count
action filter_type
action find
entity hypothetical protein    ECUMN_2563
relation found in taxon
type infraspecific name
['hypothetical protein    ECUMN_2563', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?k ) WHERE { resource:hypothetical_protein____ECUMN_2563 property:found_in_taxon ?s . ?s rdf:type ontology:infraspecific_name }
[]
infraspecific name
SYSTEM
1
(Q24146701,P703,c(Q631147))
action count
action filter_type
action find
entity Q24146701
relation P703
type Q631147
[ANSWER]
['Q24146701', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?k ) WHERE { resource:Q24146701 property:P703 ?s . ?s rdf:type ontology:Q631147 }
1
action count
action filter_type
action find
entity hypothetical protein    ECUMN_2563
relation found in taxon
type infraspecific name
['hypothetical protein    ECUMN_2563', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?k ) WHERE { resource:hypothetical_protein____ECUMN_2563 property:found_in_taxon ?s . ?s rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24146701
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
action filter_type
action find_reverse
entity Q24146701
relation P688
type Q863908
SELECT DISTINCT ?r WHERE { ?r property:P688 resource:Q24146701 . ?r rdf:type ontology:Q863908 }
hypothetical protein    ECUMN_2563
action filter_type
action find_reverse
entity hypothetical protein    ECUMN_2563
relation encodes
type nucleic acid sequence
SELECT DISTINCT ?r WHERE { ?r property:encodes resource:hypothetical_protein____ECUMN_2563 . ?r rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23140977
SYSTEM
hypothetical protein    ECUMN_2563
Q23140977
action filter_type
action find_reverse
entity Q24146701
relation P688
type Q863908
Hypothetical protein ECUMN 2563 encodes that nutrient
SELECT DISTINCT ?r WHERE { ?r property:P688 resource:Q24146701 . ?r rdf:type ontology:Q863908 }
hypothetical protein    ECUMN_2563
Hypothetical protein ECUMN 2563 encodes that nutrient
hypothetical protein    ECUMN_2563
action filter_type
action find_reverse
entity hypothetical protein    ECUMN_2563
relation encodes
type nucleic acid sequence
SELECT DISTINCT ?r WHERE { ?r property:encodes resource:hypothetical_protein____ECUMN_2563 . ?r rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q23140977 Q24270365
P688
Q181394
USER
Is putative regulatory protein MarR    KPHS_23890 encoded by that nucleic acid sequence ?
(Q23140977,P688,Q24270365)
action is_in
entity Q24270365
action find
entity Q23140977
relation P688
['Q23140977', 'P688', 'Q24270365']
ASK WHERE { resource:Q23140977 property:P688 resource:Q24270365 }
hypothetical protein    ECUMN_2563 putative regulatory protein MarR    KPHS_23890
action is_in
entity putative regulatory protein MarR    KPHS_23890
action find
entity hypothetical protein    ECUMN_2563
relation encodes
['hypothetical protein    ECUMN_2563', 'encodes', 'putative regulatory protein MarR    KPHS_23890']
ASK WHERE { resource:hypothetical_protein____ECUMN_2563 property:encodes resource:putative_regulatory_protein_MarR____KPHS_23890 }
[]
nutrient
SYSTEM
NO
(Q23140977,P688,Q24270365)
action is_in
entity Q24270365
action find
entity Q23140977
relation P688
[ANSWER]
['Q23140977', 'P688', 'Q24270365']
ASK WHERE { resource:Q23140977 property:P688 resource:Q24270365 }
No
action is_in
entity putative regulatory protein MarR    KPHS_23890
action find
entity hypothetical protein    ECUMN_2563
relation encodes
['hypothetical protein    ECUMN_2563', 'encodes', 'putative regulatory protein MarR    KPHS_23890']
ASK WHERE { resource:hypothetical_protein____ECUMN_2563 property:encodes resource:putative_regulatory_protein_MarR____KPHS_23890 }
[]