Simple Question (Direct)
Simple Question
Q23494436
P703
Q631147
USER
Which infraspecific name is aspartate carbamoyltransferase    spr1155 found in ?
(Q23494436,P703,c(Q631147))
action filter_type
action find
entity Q23494436
relation P703
type Q631147
['Q23494436', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?k WHERE { resource:Q23494436 property:P703 ?k . ?k rdf:type ontology:Q631147 }
aspartate carbamoyltransferase    spr1155
action filter_type
action find
entity aspartate carbamoyltransferase    spr1155
relation found in taxon
type infraspecific name
['aspartate carbamoyltransferase    spr1155', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?k WHERE { resource:aspartate_carbamoyltransferase____spr1155 property:found_in_taxon ?k . ?k rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102963
SYSTEM
Streptococcus pneumoniae R6
Q21102963
(Q23494436,P703,c(Q631147))
action filter_type
action find
entity Q23494436
relation P703
type Q631147
Which infraspecific name is aspartate carbamoyltransferase spr1155 found in
['Q23494436', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?k WHERE { resource:Q23494436 property:P703 ?k . ?k rdf:type ontology:Q631147 }
Streptococcus pneumoniae R6
Which infraspecific name is aspartate carbamoyltransferase spr1155 found in
Streptococcus pneumoniae R6
action filter_type
action find
entity aspartate carbamoyltransferase    spr1155
relation found in taxon
type infraspecific name
['aspartate carbamoyltransferase    spr1155', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?k WHERE { resource:aspartate_carbamoyltransferase____spr1155 property:found_in_taxon ?k . ?k rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23494436
P702
Q863908
USER
Which nucleic acid sequence encodes aspartate carbamoyltransferase    spr1155 ?
(Q23494436,P702,c(Q863908))
action filter_type
action find
entity Q23494436
relation P702
type Q863908
['Q23494436', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:Q863908 . resource:Q23494436 property:P702 ?y }
aspartate carbamoyltransferase    spr1155
action filter_type
action find
entity aspartate carbamoyltransferase    spr1155
relation encoded by
type nucleic acid sequence
['aspartate carbamoyltransferase    spr1155', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:nucleic_acid_sequence . resource:aspartate_carbamoyltransferase____spr1155 property:encoded_by ?y }
[]
nucleic acid sequence
Q23227484
SYSTEM
aspartate carbamoyltransferase    spr1155
Q23227484
(Q23494436,P702,c(Q863908))
action filter_type
action find
entity Q23494436
relation P702
type Q863908
Aspartate carbamoyltransferase spr1155 encodes aspartate carbamoyltransferase spr1155
['Q23494436', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:Q863908 . resource:Q23494436 property:P702 ?y }
aspartate carbamoyltransferase    spr1155
Aspartate carbamoyltransferase spr1155 encodes aspartate carbamoyltransferase spr1155
aspartate carbamoyltransferase    spr1155
action filter_type
action find
entity aspartate carbamoyltransferase    spr1155
relation encoded by
type nucleic acid sequence
['aspartate carbamoyltransferase    spr1155', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:nucleic_acid_sequence . resource:aspartate_carbamoyltransferase____spr1155 property:encoded_by ?y }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23494436
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by aspartate carbamoyltransferase    spr1155 ?
(c(Q863908),P688,Q23494436)
action filter_type
action find_reverse
entity Q23494436
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23494436']
SELECT DISTINCT ?d WHERE { ?d property:P688 resource:Q23494436 . ?d rdf:type ontology:Q863908 }
aspartate carbamoyltransferase    spr1155
action filter_type
action find_reverse
entity aspartate carbamoyltransferase    spr1155
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'aspartate carbamoyltransferase    spr1155']
SELECT DISTINCT ?d WHERE { ?d property:encodes resource:aspartate_carbamoyltransferase____spr1155 . ?d rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23227484
SYSTEM
aspartate carbamoyltransferase    spr1155
Q23227484
(c(Q863908),P688,Q23494436)
action filter_type
action find_reverse
entity Q23494436
relation P688
type Q863908
The nucleic acid sequence that is encoded by aspartate carbamoyltransferase spr1155 is also aspartate carbamoyltransferase spr1155
[{'concept': 'Q863908'}, 'P688', 'Q23494436']
SELECT DISTINCT ?d WHERE { ?d property:P688 resource:Q23494436 . ?d rdf:type ontology:Q863908 }
aspartate carbamoyltransferase    spr1155
The nucleic acid sequence that is encoded by aspartate carbamoyltransferase spr1155 is also aspartate carbamoyltransferase spr1155
aspartate carbamoyltransferase    spr1155
action filter_type
action find_reverse
entity aspartate carbamoyltransferase    spr1155
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'aspartate carbamoyltransferase    spr1155']
SELECT DISTINCT ?d WHERE { ?d property:encodes resource:aspartate_carbamoyltransferase____spr1155 . ?d rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23494436
P681
Q15989253
USER
Which part is a component of that nutrient ?
(Q23227484,P681,c(Q15989253))
action filter_type
action find
entity Q23494436
relation P681
type Q15989253
['Q23227484', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q23494436 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
aspartate carbamoyltransferase    spr1155
action filter_type
action find
entity aspartate carbamoyltransferase    spr1155
relation cell component
type part
['aspartate carbamoyltransferase    spr1155', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:aspartate_carbamoyltransferase____spr1155 property:cell_component ?e . ?e rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23227484,P681,c(Q15989253))
action filter_type
action find
entity Q23494436
relation P681
type Q15989253
[ANSWER] is a component of that nutrient
['Q23227484', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q23494436 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
cytoplasm
Cytoplasm is a component of that nutrient
cytoplasm
action filter_type
action find
entity aspartate carbamoyltransferase    spr1155
relation cell component
type part
['aspartate carbamoyltransferase    spr1155', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:aspartate_carbamoyltransferase____spr1155 property:cell_component ?e . ?e rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation|Incomplete
Q23438125 Q23494436
P681
Q15989253
USER
Or GGDEF domain-containing protein    VF_A0476?
OR((Q23494436,P681,c(Q15989253)), (Q23438125,P681,c(Q15989253)))
action filter_type
action union
action find
entity Q23494436
relation P681
action find
entity Q23438125
relation P681
type Q15989253
{'OR': [['Q23494436', 'P681', {'concept': 'Q15989253'}], ['Q23438125', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?x WHERE { { VALUES ( ?i ) { ( resource:Q23494436 ) ( resource:Q23438125 ) } . ?i property:P681 ?x } . ?x rdf:type ontology:Q15989253 }
GGDEF domain-containing protein    VF_A0476 aspartate carbamoyltransferase    spr1155
action filter_type
action union
action find
entity aspartate carbamoyltransferase    spr1155
relation cell component
action find
entity GGDEF domain-containing protein    VF_A0476
relation cell component
type part
{'OR': [['aspartate carbamoyltransferase    spr1155', 'cell component', {'concept': 'part'}], ['GGDEF domain-containing protein    VF_A0476', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?x WHERE { { VALUES ( ?i ) { ( resource:aspartate_carbamoyltransferase____spr1155 ) ( resource:GGDEF_domain-containing_protein____VF_A0476 ) } . ?i property:cell_component ?x } . ?x rdf:type ontology:part }
[]
part
Q79899 Q14349455
SYSTEM
cytoplasm, membrane
Q79899 Q14349455
OR((Q23494436,P681,c(Q15989253)), (Q23438125,P681,c(Q15989253)))
action filter_type
action union
action find
entity Q23494436
relation P681
action find
entity Q23438125
relation P681
type Q15989253
[ANSWERS]
{'OR': [['Q23494436', 'P681', {'concept': 'Q15989253'}], ['Q23438125', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?x WHERE { { VALUES ( ?i ) { ( resource:Q23494436 ) ( resource:Q23438125 ) } . ?i property:P681 ?x } . ?x rdf:type ontology:Q15989253 }
cytoplasm membrane
cytoplasm membrane
action filter_type
action union
action find
entity aspartate carbamoyltransferase    spr1155
relation cell component
action find
entity GGDEF domain-containing protein    VF_A0476
relation cell component
type part
{'OR': [['aspartate carbamoyltransferase    spr1155', 'cell component', {'concept': 'part'}], ['GGDEF domain-containing protein    VF_A0476', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?x WHERE { { VALUES ( ?i ) { ( resource:aspartate_carbamoyltransferase____spr1155 ) ( resource:GGDEF_domain-containing_protein____VF_A0476 ) } . ?i property:cell_component ?x } . ?x rdf:type ontology:part }
[]
Clarification
Simple Question|Single Entity|Indirect
Q79899
P361
Q20011319
USER
What is a component of that part ?
(c(Q20011319),P361,Q79899)
action filter_type
action find_reverse
entity Q79899
relation P361
type Q20011319
[{'concept': 'Q20011319'}, 'P361', 'Q79899']
SELECT DISTINCT ?j WHERE { ?j property:P361 resource:Q79899 . ?j rdf:type ontology:Q20011319 }
cytoplasm
action filter_type
action find_reverse
entity cytoplasm
relation part of
type part of a plant
[{'concept': 'part of a plant'}, 'part of', 'cytoplasm']
SELECT DISTINCT ?j WHERE { ?j property:part_of resource:cytoplasm . ?j rdf:type ontology:part_of_a_plant }
[]
part of a plant
Clarification for simple ques.
Q14349455
SYSTEM
Did you mean membrane ?
Q79899 Q14349455
(c(Q20011319),P361,Q79899) (c(Q20011319),P361,Q14349455)
[ANSWER]
[{'concept': 'Q20011319'}, 'P361', 'Q79899'] [{'concept': 'Q20011319'}, 'P361', 'Q14349455']
SELECT DISTINCT ?j WHERE { ?j property:P361 resource:Q79899 . ?j rdf:type ontology:Q20011319 }
cytoplasm membrane
Did you mean membrane ?
membrane
[{'concept': 'part of a plant'}, 'part of', 'cytoplasm'] [{'concept': 'part of a plant'}, 'part of', 'membrane']
SELECT DISTINCT ?j WHERE { ?j property:part_of resource:cytoplasm . ?j rdf:type ontology:part_of_a_plant }
[]
Simple Question (Coreferenced)
USER
No, I meant cytoplasm. Could you tell me the answer for that?
(c(Q20011319),P361,Q79899)
Q79899
[{'concept': 'Q20011319'}, 'P361', 'Q79899']
[{'concept': 'part of a plant'}, 'part of', 'cytoplasm']
[]
Q22329458
SYSTEM
cytoplasmic region
Q22329458
(c(Q20011319),P361,Q79899)
action filter_type
action find_reverse
entity Q79899
relation P361
type Q20011319
A component of that part is a [ANSWER]
[{'concept': 'Q20011319'}, 'P361', 'Q79899']
SELECT DISTINCT ?j WHERE { ?j property:P361 resource:Q79899 . ?j rdf:type ontology:Q20011319 }
cytoplasmic region
A component of that part is a cytoplasmic region
cytoplasmic region
action filter_type
action find_reverse
entity cytoplasm
relation part of
type part of a plant
[{'concept': 'part of a plant'}, 'part of', 'cytoplasm']
SELECT DISTINCT ?j WHERE { ?j property:part_of resource:cytoplasm . ?j rdf:type ontology:part_of_a_plant }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q22329091
Q20011319
USER
And also tell me about proplastid nucleoid?
(Q22329091,P361,c(Q20011319))
action filter_type
action find
entity Q22329091
relation P361
type Q20011319
['Q22329091', 'P361', {'concept': 'Q20011319'}]
SELECT DISTINCT ?l WHERE { resource:Q22329091 property:P361 ?l . ?l rdf:type ontology:Q20011319 }
proplastid nucleoid
action filter_type
action find
entity proplastid nucleoid
relation part of
type part of a plant
['proplastid nucleoid', 'part of', {'concept': 'part of a plant'}]
SELECT DISTINCT ?l WHERE { resource:proplastid_nucleoid property:part_of ?l . ?l rdf:type ontology:part_of_a_plant }
[]
part of a plant
Q22329056
SYSTEM
proplastid
Q22329056
(Q22329091,P361,c(Q20011319))
action filter_type
action find
entity Q22329091
relation P361
type Q20011319
[ANSWER]
['Q22329091', 'P361', {'concept': 'Q20011319'}]
SELECT DISTINCT ?l WHERE { resource:Q22329091 property:P361 ?l . ?l rdf:type ontology:Q20011319 }
proplastid
proplastid
action filter_type
action find
entity proplastid nucleoid
relation part of
type part of a plant
['proplastid nucleoid', 'part of', {'concept': 'part of a plant'}]
SELECT DISTINCT ?l WHERE { resource:proplastid_nucleoid property:part_of ?l . ?l rdf:type ontology:part_of_a_plant }
[]