Simple Question (Direct)
Simple Question
Q27550815
P681
Q15989253
USER
Which are the cell components of oxysterol-binding protein KES1 YPL145C ?
(Q27550815,P681,c(Q15989253))
action filter_type
action find
entity Q27550815
relation P681
type Q15989253
['Q27550815', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q15989253 . resource:Q27550815 property:P681 ?t }
oxysterol-binding protein KES1 YPL145C
action filter_type
action find
entity oxysterol-binding protein KES1 YPL145C
relation cell component
type part
['oxysterol-binding protein KES1 YPL145C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:part . resource:oxysterol-binding_protein_KES1_YPL145C property:cell_component ?t }
[]
part
Q79899 Q14349455
SYSTEM
cytoplasm, membrane
Q79899 Q14349455
(Q27550815,P681,c(Q15989253))
action filter_type
action find
entity Q27550815
relation P681
type Q15989253
The cell components of oxysterol-binding protein KES1 YPL145C are in [ANSWERS]
['Q27550815', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q15989253 . resource:Q27550815 property:P681 ?t }
cytoplasm membrane
The cell components of oxysterol-binding protein KES1 YPL145C are in cytoplasm and membrane
cytoplasm membrane
action filter_type
action find
entity oxysterol-binding protein KES1 YPL145C
relation cell component
type part
['oxysterol-binding protein KES1 YPL145C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:part . resource:oxysterol-binding_protein_KES1_YPL145C property:cell_component ?t }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27550815
P703
Q631147
USER
Where is oxysterol-binding protein KES1 YPL145C found ?
(Q27550815,P703,c(Q631147))
action filter_type
action find
entity Q27550815
relation P703
type Q631147
['Q27550815', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?b WHERE { resource:Q27550815 property:P703 ?b . ?b rdf:type ontology:Q631147 }
oxysterol-binding protein KES1 YPL145C
action filter_type
action find
entity oxysterol-binding protein KES1 YPL145C
relation found in taxon
type infraspecific name
['oxysterol-binding protein KES1 YPL145C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?b WHERE { resource:oxysterol-binding_protein_KES1_YPL145C property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27550815,P703,c(Q631147))
action filter_type
action find
entity Q27550815
relation P703
type Q631147
Oxysterol-binding protein KES1 YPL145C is found in [ANSWER]
['Q27550815', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?b WHERE { resource:Q27550815 property:P703 ?b . ?b rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
Oxysterol-binding protein KES1 YPL145C is found in Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
action filter_type
action find
entity oxysterol-binding protein KES1 YPL145C
relation found in taxon
type infraspecific name
['oxysterol-binding protein KES1 YPL145C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?b WHERE { resource:oxysterol-binding_protein_KES1_YPL145C property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23506624
Q631147
USER
And also tell me about prophage pi2 protein 34    L57508?
(Q23506624,P703,c(Q631147))
action filter_type
action find
entity Q23506624
relation P703
type Q631147
['Q23506624', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?v WHERE { resource:Q23506624 property:P703 ?v . ?v rdf:type ontology:Q631147 }
prophage pi2 protein 34    L57508
action filter_type
action find
entity prophage pi2 protein 34    L57508
relation found in taxon
type infraspecific name
['prophage pi2 protein 34    L57508', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?v WHERE { resource:prophage_pi2_protein_34____L57508 property:found_in_taxon ?v . ?v rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102967
SYSTEM
Lactococcus lactis subsp. lactis Il1403
Q21102967
(Q23506624,P703,c(Q631147))
action filter_type
action find
entity Q23506624
relation P703
type Q631147
[ANSWER]
['Q23506624', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?v WHERE { resource:Q23506624 property:P703 ?v . ?v rdf:type ontology:Q631147 }
Lactococcus lactis subsp. lactis Il1403
Lactococcus lactis subsp. lactis Il1403
action filter_type
action find
entity prophage pi2 protein 34    L57508
relation found in taxon
type infraspecific name
['prophage pi2 protein 34    L57508', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?v WHERE { resource:prophage_pi2_protein_34____L57508 property:found_in_taxon ?v . ?v rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23506624
P702
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(Q21102967,P702,c(Q863908))
action filter_type
action find
entity Q23506624
relation P702
type Q863908
['Q21102967', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?q WHERE { resource:Q23506624 property:P702 ?q . ?q rdf:type ontology:Q863908 }
prophage pi2 protein 34    L57508
action filter_type
action find
entity prophage pi2 protein 34    L57508
relation encoded by
type nucleic acid sequence
['Lactococcus lactis subsp. lactis Il1403', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?q WHERE { resource:prophage_pi2_protein_34____L57508 property:encoded_by ?q . ?q rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23185340
SYSTEM
prophage pi2 protein 34    L57508
Q23185340
(Q21102967,P702,c(Q863908))
action filter_type
action find
entity Q23506624
relation P702
type Q863908
Prophage pi2 protein 34 L57508 encodes that nutrient
['Q21102967', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?q WHERE { resource:Q23506624 property:P702 ?q . ?q rdf:type ontology:Q863908 }
prophage pi2 protein 34    L57508
Prophage pi2 protein 34 L57508 encodes that nutrient
prophage pi2 protein 34    L57508
action filter_type
action find
entity prophage pi2 protein 34    L57508
relation encoded by
type nucleic acid sequence
['Lactococcus lactis subsp. lactis Il1403', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?q WHERE { resource:prophage_pi2_protein_34____L57508 property:encoded_by ?q . ?q rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23185340
P688
Q181394
USER
Which nutrient is encoded by that nucleic acid sequence ?
(Q23185340,P688,c(Q181394))
action filter_type
action find
entity Q23185340
relation P688
type Q181394
['Q23185340', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { resource:Q23185340 property:P688 ?t . ?t rdf:type ontology:Q181394 }
prophage pi2 protein 34    L57508
action filter_type
action find
entity prophage pi2 protein 34    L57508
relation encodes
type nutrient
['prophage pi2 protein 34    L57508', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { resource:prophage_pi2_protein_34____L57508 property:encodes ?t . ?t rdf:type ontology:nutrient }
[]
nutrient
Q23506624
SYSTEM
prophage pi2 protein 34    L57508
Q23506624
(Q23185340,P688,c(Q181394))
action filter_type
action find
entity Q23185340
relation P688
type Q181394
Prophage pi2 protein 34 L57508 is encoded by that nucleic acid sequence
['Q23185340', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { resource:Q23185340 property:P688 ?t . ?t rdf:type ontology:Q181394 }
prophage pi2 protein 34    L57508
Prophage pi2 protein 34 L57508 is encoded by that nucleic acid sequence
prophage pi2 protein 34    L57508
action filter_type
action find
entity prophage pi2 protein 34    L57508
relation encodes
type nutrient
['prophage pi2 protein 34    L57508', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { resource:prophage_pi2_protein_34____L57508 property:encodes ?t . ?t rdf:type ontology:nutrient }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q18298450
Q181394
USER
And also tell me about Zfp280d?
(Q18298450,P688,c(Q181394))
action filter_type
action find
entity Q18298450
relation P688
type Q181394
['Q18298450', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?o WHERE { resource:Q18298450 property:P688 ?o . ?o rdf:type ontology:Q181394 }
Zfp280d
action filter_type
action find
entity Zfp280d
relation encodes
type nutrient
['Zfp280d', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?o WHERE { resource:Zfp280d property:encodes ?o . ?o rdf:type ontology:nutrient }
[]
nutrient
Q21992420
SYSTEM
Zinc finger protein 280D
Q21992420
(Q18298450,P688,c(Q181394))
action filter_type
action find
entity Q18298450
relation P688
type Q181394
[ANSWER]
['Q18298450', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?o WHERE { resource:Q18298450 property:P688 ?o . ?o rdf:type ontology:Q181394 }
Zinc finger protein 280D
Zinc finger protein 280D
action filter_type
action find
entity Zfp280d
relation encodes
type nutrient
['Zfp280d', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?o WHERE { resource:Zfp280d property:encodes ?o . ?o rdf:type ontology:nutrient }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q21110752
P129
Q181394 Q8386 Q79529
USER
Which nutrients do less number of drugs or chemical substances collaborate with than Cytochrome P450 2J2 ?
(c(Q8386)|c(Q79529),P129,c(Q181394))
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action count
action filter_multi_types
action find_reverse
entity Q21110752
relation P129
type Q8386
type Q79529
[[{'concept': 'Q8386'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?n WHERE { FILTER ( ?h < ?z ) . { SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) WHERE { ?q property:P129 resource:Q21110752 . { { ?q rdf:type ontology:Q8386 } UNION { ?q rdf:type ontology:Q79529 } } } } . { SELECT DISTINCT ?n ( COUNT ( ?b ) AS ?h ) WHERE { ?b rdf:type ?a . VALUES ( ?a ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } } GROUP BY ?n } }
Cytochrome P450 2J2
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action count
action filter_multi_types
action find_reverse
entity Cytochrome P450 2J2
relation physically interacts with
type drug
type chemical substance
[[{'concept': 'drug'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?n WHERE { FILTER ( ?h < ?z ) . { SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) WHERE { ?q property:physically_interacts_with resource:Cytochrome_P450_2J2 . { { ?q rdf:type ontology:drug } UNION { ?q rdf:type ontology:chemical_substance } } } } . { SELECT DISTINCT ?n ( COUNT ( ?b ) AS ?h ) WHERE { ?b rdf:type ?a . VALUES ( ?a ) { ( ontology:drug ) ( ontology:chemical_substance ) } } GROUP BY ?n } }
[]
nutrient drug chemical substance
Q423510 Q15324125 Q1407929
SYSTEM
Amyloid beta A4 protein, Transient receptor potential cation channel subfamily V member 4, Cytochrome P450 1A1
Q21494718 Q21108693 Q1407929 Q21173169 Q423510 Q21113552 Q21496578 Q21496575 Q21496576 Q15324125 Q21154430 Q3931282 Q21139123 Q21496918 Q5014947 Q21172884 Q21172886 Q315860 Q1979313 Q21495791
(c(Q8386)|c(Q79529),P129,c(Q181394))
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action count
action filter_multi_types
action find_reverse
entity Q21110752
relation P129
type Q8386
type Q79529
[ANSWERS] less number of drugs or chemical substances collaborate with than Cytochrome P450 2J2
[[{'concept': 'Q8386'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?n WHERE { FILTER ( ?h < ?z ) . { SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) WHERE { ?q property:P129 resource:Q21110752 . { { ?q rdf:type ontology:Q8386 } UNION { ?q rdf:type ontology:Q79529 } } } } . { SELECT DISTINCT ?n ( COUNT ( ?b ) AS ?h ) WHERE { ?b rdf:type ?a . VALUES ( ?a ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } } GROUP BY ?n } }
Lysophosphatidic acid receptor 2 G-protein coupled receptor 87 Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Amyloid beta A4 protein ATP-sensitive inward rectifier potassium channel 14 Lysophosphatidic acid receptor 3 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Transient receptor potential cation channel subfamily V member 4 Lysophosphatidic acid receptor 4 Calcitonin receptor Lysophosphatidic acid receptor 2 Lysophosphatidic acid receptor 1 Cytochrome P450 1B1 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Calcitonin Very low-density lipoprotein receptor Metabotropic glutamate receptor 5
Amyloid beta A4 protein, Transient receptor potential cation channel subfamily V member 4 and Cytochrome P450 1A1 less number of drugs or chemical substances collaborate with than Cytochrome P450 2J2
Amyloid beta A4 protein Transient receptor potential cation channel subfamily V member 4 Cytochrome P450 1A1
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action count
action filter_multi_types
action find_reverse
entity Cytochrome P450 2J2
relation physically interacts with
type drug
type chemical substance
[[{'concept': 'drug'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?n WHERE { FILTER ( ?h < ?z ) . { SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) WHERE { ?q property:physically_interacts_with resource:Cytochrome_P450_2J2 . { { ?q rdf:type ontology:drug } UNION { ?q rdf:type ontology:chemical_substance } } } } . { SELECT DISTINCT ?n ( COUNT ( ?b ) AS ?h ) WHERE { ?b rdf:type ?a . VALUES ( ?a ) { ( ontology:drug ) ( ontology:chemical_substance ) } } GROUP BY ?n } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type|Incomplete
Q3609382
P129
Q181394 Q8386 Q79529
USER
And also tell me about Cytochrome P450 11B2, mitochondrial?
(c(Q8386)|c(Q79529),P129,c(Q181394))
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action count
action filter_multi_types
action find_reverse
entity Q3609382
relation P129
type Q8386
type Q79529
[[{'concept': 'Q8386'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?v ) WHERE { ?m property:P129 resource:Q3609382 . { VALUES ( ?y ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } . ?m rdf:type ?y } } } . FILTER ( ?l < ?v ) . { SELECT DISTINCT ?u ( COUNT ( ?e ) AS ?l ) WHERE { ?e rdf:type ?d . VALUES ( ?d ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } } GROUP BY ?u } }
Cytochrome P450 11B2, mitochondrial
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action count
action filter_multi_types
action find_reverse
entity Cytochrome P450 11B2, mitochondrial
relation physically interacts with
type drug
type chemical substance
[[{'concept': 'drug'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?v ) WHERE { ?m property:physically_interacts_with resource:Cytochrome_P450_11B2,_mitochondrial . { VALUES ( ?y ) { ( ontology:drug ) ( ontology:chemical_substance ) } . ?m rdf:type ?y } } } . FILTER ( ?l < ?v ) . { SELECT DISTINCT ?u ( COUNT ( ?e ) AS ?l ) WHERE { ?e rdf:type ?d . VALUES ( ?d ) { ( ontology:drug ) ( ontology:chemical_substance ) } } GROUP BY ?u } }
[]
nutrient drug chemical substance
Q423510 Q15324125 Q1407929
SYSTEM
Amyloid beta A4 protein, Transient receptor potential cation channel subfamily V member 4, Cytochrome P450 1A1
Q21494718 Q21108693 Q1407929 Q21173169 Q423510 Q21113552 Q21496578 Q21496575 Q21496576 Q15324125 Q21154430 Q3931282 Q21139123 Q21496918 Q5014947 Q21172884 Q21172886 Q315860 Q1979313 Q21495791
(c(Q8386)|c(Q79529),P129,c(Q181394))
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action count
action filter_multi_types
action find_reverse
entity Q3609382
relation P129
type Q8386
type Q79529
[ANSWERS]
[[{'concept': 'Q8386'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?v ) WHERE { ?m property:P129 resource:Q3609382 . { VALUES ( ?y ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } . ?m rdf:type ?y } } } . FILTER ( ?l < ?v ) . { SELECT DISTINCT ?u ( COUNT ( ?e ) AS ?l ) WHERE { ?e rdf:type ?d . VALUES ( ?d ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } } GROUP BY ?u } }
Lysophosphatidic acid receptor 2 G-protein coupled receptor 87 Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Amyloid beta A4 protein ATP-sensitive inward rectifier potassium channel 14 Lysophosphatidic acid receptor 3 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Transient receptor potential cation channel subfamily V member 4 Lysophosphatidic acid receptor 4 Calcitonin receptor Lysophosphatidic acid receptor 2 Lysophosphatidic acid receptor 1 Cytochrome P450 1B1 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Calcitonin Very low-density lipoprotein receptor Metabotropic glutamate receptor 5
Amyloid beta A4 protein Transient receptor potential cation channel subfamily V member 4 Cytochrome P450 1A1
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action count
action filter_multi_types
action find_reverse
entity Cytochrome P450 11B2, mitochondrial
relation physically interacts with
type drug
type chemical substance
[[{'concept': 'drug'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?v ) WHERE { ?m property:physically_interacts_with resource:Cytochrome_P450_11B2,_mitochondrial . { VALUES ( ?y ) { ( ontology:drug ) ( ontology:chemical_substance ) } . ?m rdf:type ?y } } } . FILTER ( ?l < ?v ) . { SELECT DISTINCT ?u ( COUNT ( ?e ) AS ?l ) WHERE { ?e rdf:type ?d . VALUES ( ?d ) { ( ontology:drug ) ( ontology:chemical_substance ) } } GROUP BY ?u } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q423510
P682
Q1057
USER
What is the metabolic process that Amyloid beta A4 protein is involved in ?
(Q423510,P682,c(Q1057))
action filter_type
action find
entity Q423510
relation P682
type Q1057
['Q423510', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?e WHERE { resource:Q423510 property:P682 ?e . ?e rdf:type ontology:Q1057 }
Amyloid beta A4 protein
action filter_type
action find
entity Amyloid beta A4 protein
relation biological process
type metabolic process
['Amyloid beta A4 protein', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?e WHERE { resource:Amyloid_beta_A4_protein property:biological_process ?e . ?e rdf:type ontology:metabolic_process }
[]
metabolic process
Q21095286
SYSTEM
amyloid fibril formation
Q21095286
(Q423510,P682,c(Q1057))
action filter_type
action find
entity Q423510
relation P682
type Q1057
The metabolic process that Amyloid beta A4 protein is involved in is the [ANSWER]
['Q423510', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?e WHERE { resource:Q423510 property:P682 ?e . ?e rdf:type ontology:Q1057 }
amyloid fibril formation
The metabolic process that Amyloid beta A4 protein is involved in is the amyloid fibril formation
amyloid fibril formation
action filter_type
action find
entity Amyloid beta A4 protein
relation biological process
type metabolic process
['Amyloid beta A4 protein', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?e WHERE { resource:Amyloid_beta_A4_protein property:biological_process ?e . ?e rdf:type ontology:metabolic_process }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q423510
P680
Q44424
USER
Which chemical bonds represent molecular function of Amyloid beta A4 protein ?
(Q423510,P680,c(Q44424))
action filter_type
action find
entity Q423510
relation P680
type Q44424
['Q423510', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?o WHERE { resource:Q423510 property:P680 ?o . ?o rdf:type ontology:Q44424 }
Amyloid beta A4 protein
action filter_type
action find
entity Amyloid beta A4 protein
relation molecular function
type chemical bond
['Amyloid beta A4 protein', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?o WHERE { resource:Amyloid_beta_A4_protein property:molecular_function ?o . ?o rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380 Q14865842
SYSTEM
metal ion binding, transition metal ion binding
Q13667380 Q14865842
(Q423510,P680,c(Q44424))
action filter_type
action find
entity Q423510
relation P680
type Q44424
The [ANSWERS] represent molecular function of Amyloid beta A4 protein
['Q423510', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?o WHERE { resource:Q423510 property:P680 ?o . ?o rdf:type ontology:Q44424 }
metal ion binding transition metal ion binding
The metal ion binding and transition metal ion binding represent molecular function of Amyloid beta A4 protein
metal ion binding transition metal ion binding
action filter_type
action find
entity Amyloid beta A4 protein
relation molecular function
type chemical bond
['Amyloid beta A4 protein', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?o WHERE { resource:Amyloid_beta_A4_protein property:molecular_function ?o . ?o rdf:type ontology:chemical_bond }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21174515
Q44424
USER
And also tell me about Tripartite motif-containing protein 6?
(Q21174515,P680,c(Q44424))
action filter_type
action find
entity Q21174515
relation P680
type Q44424
['Q21174515', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?v WHERE { resource:Q21174515 property:P680 ?v . ?v rdf:type ontology:Q44424 }
Tripartite motif-containing protein 6
action filter_type
action find
entity Tripartite motif-containing protein 6
relation molecular function
type chemical bond
['Tripartite motif-containing protein 6', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?v WHERE { resource:Tripartite_motif-containing_protein_6 property:molecular_function ?v . ?v rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380 Q14633865
SYSTEM
metal ion binding, zinc ion binding
Q13667380 Q14633865
(Q21174515,P680,c(Q44424))
action filter_type
action find
entity Q21174515
relation P680
type Q44424
[ANSWERS]
['Q21174515', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?v WHERE { resource:Q21174515 property:P680 ?v . ?v rdf:type ontology:Q44424 }
metal ion binding zinc ion binding
metal ion binding zinc ion binding
action filter_type
action find
entity Tripartite motif-containing protein 6
relation molecular function
type chemical bond
['Tripartite motif-containing protein 6', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?v WHERE { resource:Tripartite_motif-containing_protein_6 property:molecular_function ?v . ?v rdf:type ontology:chemical_bond }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q27548023
P680
Q181394
USER
Do alcohol dehydrogenase ADH2 YMR303C have molecular function as those chemical bonds ?
(Q27548023,P680,Q13667380) (Q27548023,P680,Q14633865)
action is_in
entity prev_answer
action find
entity Q27548023
relation P680
['Q27548023', 'P680', 'Q13667380'] ['Q27548023', 'P680', 'Q14633865']
ASK WHERE { resource:Q27548023 property:P680 ?r . VALUES ( ?r ) { ( resource:Q13667380 ) ( resource:Q14633865 ) } }
alcohol dehydrogenase ADH2 YMR303C
action is_in
entity prev_answer
action find
entity alcohol dehydrogenase ADH2 YMR303C
relation molecular function
['alcohol dehydrogenase ADH2 YMR303C', 'molecular function', 'metal ion binding'] ['alcohol dehydrogenase ADH2 YMR303C', 'molecular function', 'zinc ion binding']
ASK WHERE { resource:alcohol_dehydrogenase_ADH2_YMR303C property:molecular_function ?r . VALUES ( ?r ) { ( resource:metal_ion_binding ) ( resource:zinc_ion_binding ) } }
[]
nutrient
SYSTEM
YES
(Q27548023,P680,Q13667380) (Q27548023,P680,Q14633865)
action is_in
entity prev_answer
action find
entity Q27548023
relation P680
[ANSWER]
['Q27548023', 'P680', 'Q13667380'] ['Q27548023', 'P680', 'Q14633865']
ASK WHERE { resource:Q27548023 property:P680 ?r . VALUES ( ?r ) { ( resource:Q13667380 ) ( resource:Q14633865 ) } }
Yes
action is_in
entity prev_answer
action find
entity alcohol dehydrogenase ADH2 YMR303C
relation molecular function
['alcohol dehydrogenase ADH2 YMR303C', 'molecular function', 'metal ion binding'] ['alcohol dehydrogenase ADH2 YMR303C', 'molecular function', 'zinc ion binding']
ASK WHERE { resource:alcohol_dehydrogenase_ADH2_YMR303C property:molecular_function ?r . VALUES ( ?r ) { ( resource:metal_ion_binding ) ( resource:zinc_ion_binding ) } }
[]
Simple Question (Ellipsis)
Incomplete|object parent is changed, subject and predicate remain same
Q27548023
Q44424
USER
And which chemical bond?
(Q27548023,P680,c(Q44424))
action filter_type
action find
entity Q27548023
relation P680
type Q44424
['Q27548023', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?p WHERE { resource:Q27548023 property:P680 ?p . ?p rdf:type ontology:Q44424 }
alcohol dehydrogenase ADH2 YMR303C
action filter_type
action find
entity alcohol dehydrogenase ADH2 YMR303C
relation molecular function
type chemical bond
['alcohol dehydrogenase ADH2 YMR303C', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?p WHERE { resource:alcohol_dehydrogenase_ADH2_YMR303C property:molecular_function ?p . ?p rdf:type ontology:chemical_bond }
[]
chemical bond
Q14633865 Q13667380
SYSTEM
zinc ion binding, metal ion binding
Q14633865 Q13667380
(Q27548023,P680,c(Q44424))
action filter_type
action find
entity Q27548023
relation P680
type Q44424
[ANSWERS]
['Q27548023', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?p WHERE { resource:Q27548023 property:P680 ?p . ?p rdf:type ontology:Q44424 }
zinc ion binding metal ion binding
zinc ion binding metal ion binding
action filter_type
action find
entity alcohol dehydrogenase ADH2 YMR303C
relation molecular function
type chemical bond
['alcohol dehydrogenase ADH2 YMR303C', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?p WHERE { resource:alcohol_dehydrogenase_ADH2_YMR303C property:molecular_function ?p . ?p rdf:type ontology:chemical_bond }
[]