Simple Question (Direct)
Simple Question
Q24267787
P680
Q44424
USER
Which the chemical bonds that represents the molecular function of thiamine-phosphate pyrophosphorylase    KPHS_02120 ?
(Q24267787,P680,c(Q44424))
action filter_type
action find
entity Q24267787
relation P680
type Q44424
['Q24267787', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?y WHERE { resource:Q24267787 property:P680 ?y . ?y rdf:type ontology:Q44424 }
thiamine-phosphate pyrophosphorylase    KPHS_02120
action filter_type
action find
entity thiamine-phosphate pyrophosphorylase    KPHS_02120
relation molecular function
type chemical bond
['thiamine-phosphate pyrophosphorylase    KPHS_02120', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?y WHERE { resource:thiamine-phosphate_pyrophosphorylase____KPHS_02120 property:molecular_function ?y . ?y rdf:type ontology:chemical_bond }
[]
chemical bond
Q14860850 Q13667380
SYSTEM
magnesium ion binding, metal ion binding
Q14860850 Q13667380
(Q24267787,P680,c(Q44424))
action filter_type
action find
entity Q24267787
relation P680
type Q44424
Represents and [ANSWERS]
['Q24267787', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?y WHERE { resource:Q24267787 property:P680 ?y . ?y rdf:type ontology:Q44424 }
magnesium ion binding metal ion binding
Represents and magnesium ion binding and metal ion binding
magnesium ion binding metal ion binding
action filter_type
action find
entity thiamine-phosphate pyrophosphorylase    KPHS_02120
relation molecular function
type chemical bond
['thiamine-phosphate pyrophosphorylase    KPHS_02120', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?y WHERE { resource:thiamine-phosphate_pyrophosphorylase____KPHS_02120 property:molecular_function ?y . ?y rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24267787
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by thiamine-phosphate pyrophosphorylase    KPHS_02120 ?
(c(Q863908),P688,Q24267787)
action filter_type
action find_reverse
entity Q24267787
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24267787']
SELECT DISTINCT ?v WHERE { ?v property:P688 resource:Q24267787 . ?v rdf:type ontology:Q863908 }
thiamine-phosphate pyrophosphorylase    KPHS_02120
action filter_type
action find_reverse
entity thiamine-phosphate pyrophosphorylase    KPHS_02120
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'thiamine-phosphate pyrophosphorylase    KPHS_02120']
SELECT DISTINCT ?v WHERE { ?v property:encodes resource:thiamine-phosphate_pyrophosphorylase____KPHS_02120 . ?v rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23121596
SYSTEM
thiamine-phosphate pyrophosphorylase    KPHS_02120
Q23121596
(c(Q863908),P688,Q24267787)
action filter_type
action find_reverse
entity Q24267787
relation P688
type Q863908
The nucleic acid sequence that is encoded by thiamine-phosphate pyrophosphorylase KPHS_02120 is of thiamine-phosphate pyrophosphorylase KPHS 02120
[{'concept': 'Q863908'}, 'P688', 'Q24267787']
SELECT DISTINCT ?v WHERE { ?v property:P688 resource:Q24267787 . ?v rdf:type ontology:Q863908 }
thiamine-phosphate pyrophosphorylase    KPHS_02120
The nucleic acid sequence that is encoded by thiamine-phosphate pyrophosphorylase KPHS_02120 is of thiamine-phosphate pyrophosphorylase KPHS 02120
thiamine-phosphate pyrophosphorylase    KPHS_02120
action filter_type
action find_reverse
entity thiamine-phosphate pyrophosphorylase    KPHS_02120
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'thiamine-phosphate pyrophosphorylase    KPHS_02120']
SELECT DISTINCT ?v WHERE { ?v property:encodes resource:thiamine-phosphate_pyrophosphorylase____KPHS_02120 . ?v rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23121596
P703
Q631147
USER
Which taxon is that nucleic acid sequence a part of ?
(Q23121596,P703,c(Q631147))
action filter_type
action find
entity Q23121596
relation P703
type Q631147
['Q23121596', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { resource:Q23121596 property:P703 ?q . ?q rdf:type ontology:Q631147 }
thiamine-phosphate pyrophosphorylase    KPHS_02120
action filter_type
action find
entity thiamine-phosphate pyrophosphorylase    KPHS_02120
relation found in taxon
type infraspecific name
['thiamine-phosphate pyrophosphorylase    KPHS_02120', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { resource:thiamine-phosphate_pyrophosphorylase____KPHS_02120 property:found_in_taxon ?q . ?q rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102939
SYSTEM
Klebsiella pneumoniae subsp. pneumoniae HS11286
Q21102939
(Q23121596,P703,c(Q631147))
action filter_type
action find
entity Q23121596
relation P703
type Q631147
Species [ANSWER] is that nucleic acid sequence a part of
['Q23121596', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { resource:Q23121596 property:P703 ?q . ?q rdf:type ontology:Q631147 }
Klebsiella pneumoniae subsp. pneumoniae HS11286
Species Klebsiella pneumoniae subsp. pneumoniae HS11286 is that nucleic acid sequence a part of
Klebsiella pneumoniae subsp. pneumoniae HS11286
action filter_type
action find
entity thiamine-phosphate pyrophosphorylase    KPHS_02120
relation found in taxon
type infraspecific name
['thiamine-phosphate pyrophosphorylase    KPHS_02120', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { resource:thiamine-phosphate_pyrophosphorylase____KPHS_02120 property:found_in_taxon ?q . ?q rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q14330639 Q13667380
P680
Q181394
USER
Which nutrients have molecular function as metal ion binding and RNA binding ?
AND((c(Q181394),P680,Q13667380), (c(Q181394),P680,Q14330639))
action filter_type
action intersection
action find_reverse
entity Q13667380
relation P680
action find_reverse
entity Q14330639
relation P680
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P680', 'Q13667380'], [{'concept': 'Q181394'}, 'P680', 'Q14330639']]}
SELECT DISTINCT ?j WHERE { ?j property:P680 resource:Q13667380 . ?j property:P680 resource:Q14330639 . ?j rdf:type ontology:Q181394 }
RNA binding metal ion binding
action filter_type
action intersection
action find_reverse
entity metal ion binding
relation molecular function
action find_reverse
entity RNA binding
relation molecular function
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'molecular function', 'metal ion binding'], [{'concept': 'nutrient'}, 'molecular function', 'RNA binding']]}
SELECT DISTINCT ?j WHERE { ?j property:molecular_function resource:metal_ion_binding . ?j property:molecular_function resource:RNA_binding . ?j rdf:type ontology:nutrient }
[]
nutrient
Q21985834 Q27761868 Q23490075 Q14877436 Q24277555 Q23592115 Q23622873 Q21113759 Q24098266 Q22292923
SYSTEM
Some of them are Nanos homolog 1, polynucleotide phosphorylase    TM1345, 30S ribosomal protein S14    SSUBM407_0079, 2-5A-dependent ribonuclease, multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    O3K_03670, 50S ribosomal protein L31    BDGL_001895, hypothetical protein    BL1192, tRNA-specific adenosine deaminase 1, threonyl-tRNA synthetase    XCC2463, ribonuclease III    TDE1027
Q21990306 Q27761179 Q21989321 Q23526725 Q21112153 Q21136613 Q23507265 Q21136618 Q21136619 Q21120556 Q21632383 Q23532290 Q27548684 Q23501440 Q23462494 Q22987580 Q27760854 Q23493076 Q23576418 Q23634951 Q23467255 Q23518800 Q23063841 Q21992414 Q23495513 Q21980309 Q21980308 Q27740284 Q21100322 Q27761109 Q21990947 Q21986065 Q27552401 Q22300723 Q23477388 Q21599691 Q21984461 Q27759641 Q21115073 Q27759527 Q23508467 Q21132948 Q24270140 Q23437374 Q22265676 Q23595026 Q21111297 Q21157680 Q24277699 Q21991315 Q22335174 Q21135762 Q21118375 Q27550179 Q23464695 Q23490695 Q24119383 Q21496527 Q27552437 Q21604488 Q23483989 Q23594298 Q21136743 Q21107689 Q21984217 Q21989724 Q24121371 Q23454414 Q21982863 Q14914005 Q23537544 Q23539875 Q21114993 Q27760179 Q23624286 Q27551515 Q21171707 Q22291212 Q27740623 Q23491506 Q23551667 Q24278107 Q21106897 Q24148275 Q23459285 Q21119156 Q21119157 Q21494858 Q23547985 Q27550696 Q21431161 Q21989153 Q27550695 Q23626739 Q23591287 Q21496016 Q21498273 Q21113897 Q23603230 Q21987831 Q24128435 Q27547308 Q21987835 Q21173980 Q21987838 Q21121594 Q23445717 Q23427081 Q21990529 Q23423349 Q22574741 Q21985584 Q27551908 Q23501746 Q21130904 Q21982899 Q23473910 Q21986123 Q24095814 Q21174609 Q21104900 Q21096374 Q23538152 Q27551022 Q21990059 Q23445244 Q24105196 Q27476844 Q27476846 Q22987544 Q21984135 Q21499010 Q21111069 Q21985833 Q27760797 Q21985834 Q23515934 Q23525684 Q24116149 Q24124110 Q24114167 Q24113710 Q21605256 Q21981875 Q21495170 Q27746725 Q22271555 Q23568867 Q23608064 Q21978130 Q23507537 Q23477731 Q23460889 Q21136626 Q23526594 Q23480383 Q21992418 Q23615040 Q21633024 Q22264761 Q27550139 Q23489148 Q24129093 Q23446827 Q23608465 Q21169472 Q23499901 Q23063832 Q23627544 Q23449292 Q21986117 Q23467562 Q23605909 Q14862232 Q21131652 Q23437726 Q23527952 Q21132872 Q21985494 Q23602838 Q23448245 Q24112264 Q27738853 Q21106307 Q21599529 Q22257416 Q27551805 Q23490792 Q21630508 Q23550418 Q27760030 Q23602677 Q27760034 Q24279945 Q27762931 Q21105878 Q24119903 Q23432113 Q23569517 Q23470122 Q23448882 Q21632329 Q23483182 Q23516275 Q23501733 Q23476038 Q21498889 Q27552862 Q27746190 Q21096253 Q23588061 Q21172550 Q22259093 Q21172653 Q23490075 Q21496297 Q23495727 Q23602400 Q23478955 Q21982859 Q23511870 Q21605108 Q27746451 Q21113759 Q21141149 Q21991202 Q21991203 Q21106961 Q23604020 Q21992772 Q21985300 Q21496753 Q21105459 Q21986303 Q27548565 Q23548039 Q23522745 Q24148732 Q21603960 Q22300990 Q23482648 Q23449499 Q23439390 Q23480024 Q22264633 Q27552761 Q21130489 Q23459293 Q21207993 Q24104481 Q23530465 Q21096283 Q23492283 Q23492954 Q22258766 Q23492957 Q22987021 Q23487032 Q22265869 Q23502903 Q21990702 Q23549459 Q23572666 Q21112885 Q23431185 Q22300216 Q24252094 Q22300747 Q21167117 Q23522446 Q21109863 Q21986393 Q21980312 Q21495194 Q21118453 Q21986394 Q27761868 Q23480735 Q24221767 Q27553068 Q21118512 Q21990985 Q21130623 Q21498903 Q23624648 Q21987150 Q23514954 Q22234749 Q22678582 Q23463895 Q23514652 Q23470498 Q23504710 Q27549147 Q24134430 Q23527627 Q27550161 Q23489298 Q27743403 Q21111282 Q23550454 Q21992423 Q21992422 Q22257613 Q23495797 Q27552420 Q21173804 Q21603695 Q261483 Q21107976 Q21104791 Q23551477 Q2663095 Q23431965 Q27551287 Q21149590 Q27760544 Q21120626 Q23489687 Q23479562 Q22258565 Q27552943 Q23456177 Q23537256 Q23495002 Q24251810 Q23595645 Q21990524 Q24148089 Q27761777 Q15315162 Q23592515 Q21992633 Q24281667 Q23624792 Q27550190 Q27550192 Q24280243 Q23489596 Q23595323 Q23502898 Q23476844 Q21983216 Q21135116 Q27550908 Q27552938 Q21127316 Q21756612 Q23610621 Q23463050 Q23488087 Q27553031 Q24252998 Q21104807 Q23446421 Q23613904 Q27547660 Q27550997 Q23507116 Q24122162 Q21986505 Q23489475 Q23053575 Q23446423 Q27476052 Q24092262 Q24113681 Q23505707 Q23511097 Q21761345 Q21986044 Q21766962 Q23508103 Q24096371 Q21122858 Q21115125 Q22291150 Q23614023 Q23475906 Q23525128 Q24123663 Q27740372 Q22987089 Q23448506 Q23594044 Q23494665 Q21115982 Q23506659 Q23548078 Q21173960 Q21201178 Q21115407 Q23439214 Q21115244 Q21153876 Q23493245 Q27551157 Q27549922 Q23499376 Q23603600 Q21167151 Q23535806 Q23479017 Q21136967 Q27551018 Q27549214 Q23512765 Q21153886 Q21989006 Q21108475 Q27761439 Q23469404 Q27553053 Q21765692 Q27761431 Q21123852 Q23469764 Q23484094 Q22301800 Q23447422 Q23495169 Q21983594 Q21499335 Q23616653 Q14908005 Q21102307 Q22326217 Q23471798 Q23524401 Q21483218 Q22987421 Q22335421 Q21118028 Q21767045 Q22270853 Q23485152 Q21987084 Q27760024 Q27552378 Q21599877 Q23596295 Q23549546 Q23496011 Q23550700 Q21132458 Q21984805 Q27552375 Q21984807 Q21992060 Q21985416 Q23448716 Q23569504 Q24096939 Q23445194 Q23524717 Q21494626 Q22676734 Q21599955 Q23621329 Q21494748 Q23590960 Q23490665 Q21989743 Q21986498 Q23550940 Q23586702 Q23482489 Q23635913 Q21134266 Q21134265 Q24249708 Q27551903 Q27754819 Q21112520 Q27547428 Q27551906 Q23623108 Q23489885 Q27739721 Q22134727 Q21992605 Q14877436 Q21494452 Q27550712 Q21499322 Q21603578 Q21499329 Q27550719 Q23491629 Q21103284 Q27550694 Q27550979 Q27550978 Q23446767 Q21109634 Q27740231 Q21112176 Q23611782 Q23451724 Q23570558 Q22293798 Q21130998 Q21119621 Q21172827 Q21991098 Q23527621 Q22265661 Q27551752 Q22235570 Q21112555 Q21495206 Q24151171 Q27760201 Q27755725 Q23599807 Q21983162 Q23549344 Q27549385 Q23569853 Q21495571 Q23478196 Q24103711 Q27760697 Q24117767 Q21108874 Q23446286 Q23621734 Q21118660 Q22235495 Q23597829 Q21125056 Q23469688 Q21125055 Q23426016 Q23514947 Q21122816 Q21977876 Q21114159 Q23490448 Q21990354 Q27756328 Q23622873 Q21991730 Q5205796 Q21115712 Q21111274 Q21114780 Q27550117 Q22679306 Q21499458 Q27547887 Q23481176 Q22233704 Q21124756 Q23489512 Q23489045 Q23487177 Q23492650 Q23486486 Q27552432 Q27740935 Q27549224 Q23448446 Q23527926 Q21495370 Q27752598 Q22326263 Q23491557 Q21136785 Q24119990 Q22326630 Q23575315 Q21599781 Q21989166 Q21987125 Q23502084 Q23595676 Q21121666 Q21990517 Q22987410 Q23600383 Q21496015 Q24254177 Q21990510 Q22264541 Q27550459 Q23536534 Q21105814 Q23446506 Q21496013 Q23460893 Q23465364 Q21130600 Q23448210 Q21992816 Q21174599 Q21100416 Q21986215 Q23303604 Q21117439 Q21110842 Q23437937 Q22291830 Q21986219 Q21985888 Q23524549 Q27749653 Q23482202 Q21981693 Q27759462 Q23063840 Q21989776 Q21113647 Q23484164 Q21978335 Q24125618 Q23536408 Q21116870 Q27547672 Q22292827 Q21174885 Q21108146 Q21118044 Q22680310 Q23614906 Q23611059 Q23484552 Q27763126 Q23486862 Q23587240 Q21499311 Q23590358 Q21122666 Q21101071 Q21101076 Q21104922 Q21495533 Q24098266 Q24253115 Q27547919 Q22335556 Q23050609 Q21989163 Q23470726 Q21989513 Q23520306 Q21134215 Q7697809 Q21436587 Q23614055 Q24279547 Q21436584 Q23488662 Q23508020 Q23427586 Q27759335 Q23487112 Q27763532 Q23529957 Q24117833 Q21980277 Q21987778 Q23509377 Q21987415 Q23492853 Q27548365 Q23477996 Q24267164 Q22258009 Q27476189 Q27737070 Q23448798 Q23477401 Q22334131 Q23584486 Q21117768 Q27476827 Q21110445 Q21980318 Q27549186 Q23505852 Q21122190 Q23548948 Q23493180 Q23505911 Q21115780 Q21990817 Q22300739 Q27553045 Q23538030 Q27553041 Q23508110 Q23549427 Q23520407 Q21123954 Q21123956 Q21599473 Q23505274 Q23493389 Q24116626 Q23490477 Q23487968 Q17487737 Q23490470 Q23507812 Q21105854 Q27551865 Q24097946 Q21991812 Q22315705 Q21767115 Q27552369 Q21132584 Q22271106 Q27550148 Q22292411 Q23594570 Q21985177 Q21766835 Q22271719 Q21992076 Q23571735 Q27470796 Q23611987 Q21109029 Q27553082 Q21985179 Q22292927 Q23621332 Q22987665 Q27761126 Q22292923 Q23610268 Q24092981 Q23464641 Q23482717 Q22317779 Q23518748 Q23459313 Q27550709 Q23478934 Q21127013 Q27760281 Q23446478 Q23522876 Q21173237 Q27551915 Q21134378 Q23635265 Q21100537 Q27758330 Q23460250 Q21113739 Q21989836 Q21104991 Q23549208 Q22292592 Q21113646 Q21984999 Q23477871 Q27761643 Q23458805 Q23446209 Q27739492 Q24227553 Q21113649 Q22325954 Q21118682 Q24277555 Q21633409 Q24124494 Q21990514 Q23445819 Q21119611 Q21981173 Q23456616 Q23536750 Q27475171 Q24248979 Q23435700 Q21990512 Q23502432 Q27547727 Q21132160 Q23502021 Q24116870 Q21494688 Q21495442 Q27548710 Q23588478 Q21116568 Q23596251 Q21115268 Q23452373 Q23444958 Q23461636 Q27760413 Q27761419 Q21122667 Q23459768 Q27549174 Q23491120 Q23582972 Q21632274 Q23063899 Q24114089 Q21984123 Q23447006 Q21116364 Q23473787 Q23635762 Q23622086 Q296209 Q21135180 Q27553084 Q21991942 Q23433167 Q23635769 Q21991319 Q21109795 Q27547897 Q22264549 Q23507779 Q23484186 Q21172846 Q23460020 Q23494036 Q21495319 Q23512262 Q22986700 Q21495201 Q21168207 Q21987467 Q22314899 Q23622937 Q21113644 Q21986429 Q21632832 Q23523416 Q23596227 Q21111268 Q22300244 Q24131294 Q21987083 Q21122378 Q23446852 Q22272674 Q21118098 Q23477691 Q21135759 Q23484982 Q23569273 Q24094293 Q21632584 Q23584762 Q21119875 Q23448459 Q22234946 Q24113673 Q23501152 Q21132902 Q23550086 Q21989849 Q27757098 Q23073056 Q21632784 Q22258345 Q23493963 Q23468901 Q21990664 Q22987405 Q21105865 Q23569059 Q23474866 Q21106902 Q23490780 Q21172705 Q24149318 Q22335767 Q23585567 Q23486608 Q23446624 Q27740074 Q24121609 Q23063794 Q21986216 Q21599973 Q23592115 Q21498896 Q21174428 Q23530379 Q21110288 Q21978496 Q23612770 Q22290918 Q21114453 Q21125928 Q23600530 Q23490163 Q22326124 Q27552910 Q21632715 Q23065212 Q23603255 Q23483584 Q24097487 Q23491786 Q21604756 Q23434107 Q23433463 Q27551886 Q23480427 Q21985645 Q22325200 Q22325959 Q22301068 Q22300337 Q21172890 Q27763551 Q21105767 Q27552380 Q21989931 Q21499437 Q23535731 Q23610776 Q23500727 Q24094848 Q21118632 Q24252882 Q23613810 Q23425250 Q23607844 Q21494373 Q23494603 Q21120178 Q22259011 Q21108184 Q23492604 Q27550882 Q23539325 Q21112343 Q21114825 Q22265279 Q23511242 Q23426813 Q27763488
AND((c(Q181394),P680,Q13667380), (c(Q181394),P680,Q14330639))
action filter_type
action intersection
action find_reverse
entity Q13667380
relation P680
action find_reverse
entity Q14330639
relation P680
type Q181394
[ANSWERS]
{'AND': [[{'concept': 'Q181394'}, 'P680', 'Q13667380'], [{'concept': 'Q181394'}, 'P680', 'Q14330639']]}
SELECT DISTINCT ?j WHERE { ?j property:P680 resource:Q13667380 . ?j property:P680 resource:Q14330639 . ?j rdf:type ontology:Q181394 }
RING finger protein unkempt homolog nucleotidyltransferase, primase    Mfl004 Matrin-3 30S ribosomal protein S14    CA_C3120 Zinc finger CCCH domain-containing protein 14 Zinc finger protein 385B ribonuclease III    L0326 Zinc finger protein 385A Zinc finger protein 385D Ribonuclease H2 subunit A ribonuclease III    HP0662 50S ribosomal protein L31    CD630_34861 gag-pol fusion protein YPR137C-B metallo-beta-lactamase superfamily protein    EF1185 alanyl-tRNA synthetase    DVU1089 alanyl-tRNA synthetase    FTT_1096c ribonuclease III, dsRNA-specific ribonuclease    Mfl231 metallo-beta-lactamase superfamily protein    SAG1186 30S ribosomal protein S14    AMED_0690 alanyl-tRNA synthetase    RB8543 RNAse E    Rru_A2149 ribonuclease HIII    BT9727_4289 methionyl-tRNA synthetase    LA_3918 Zinc finger protein 385C ribonuclease III    spr1127 Zinc finger matrin-type protein 1 Zinc finger matrin-type protein 3 30S ribosomal protein S14    ML1846 Poly(A)-specific ribonuclease PARN metallo-beta lactamase hydrolase    Mfl570 Regulator of nonsense transcripts 1 Interferon-stimulated gene 20 kDa protein gag-pol fusion protein YML039W alanine--tRNA ligase    Cj0506 Ribonuclease PH    Pro_1307 alanyl-tRNA synthetase    BU403 RNA-binding protein EWS hypothetical protein    MSC_0670 Protein argonaute-2 alanyl-tRNA synthetase    MSC_0178 tRNA CCA-pyrophosphorylase    L0324 Splicing factor 1 ribonuclease HII    KPHS_09300 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    VF_2244 polyribonucleotide nucleotidyltransferase    NGO0335 glutamyl-tRNA synthetase    aq_1221 Endoribonuclease Dicer Serine/arginine-rich splicing factor 7 phenylalanyl-tRNA synthetase subunit beta    O3K_11415 TRMT1-like protein ribonuclease III    lpg1869 Alanine--tRNA ligase, mitochondrial Splicing factor 3A subunit 3 gag-pol fusion protein YDR365W-B ribonuclease III    DVU1440 ribonuclease HIII    SMU_1873 tRNA nucleotidyltransferase    BN117_0202 Bifunctional endoribonuclease and deubiquitinase ZC3H12A tRNA-specific adenosine deaminase YGL243W ribonuclease III    BB_0705 50S ribosomal protein L32    DR_2366 tRNA nucleotidyl transferase    BDGL_001832 Zinc finger protein 638 2-5A-dependent ribonuclease E3 ubiquitin-protein ligase DZIP3 Zinc finger CCCH domain-containing protein 14 methionyl-tRNA synthetase    BN117_0786 ribonuclease III    BT_3357 Cleavage and polyadenylation specificity factor subunit 3 Alpha-enolase polynucleotide phosphorylase/polyadenylase    Moth_1056 metallo-beta-lactamase superfamily protein    lp_2122 Serine/threonine-protein phosphatase 5 30S ribosomal protein S14    MPN178 methionyl-tRNA synthetase    PSPTO_4147 ribosomal 60S subunit protein L37B YDR500C CCR4-NOT transcription complex subunit 6 polynucleotide phosphorylase/polyadenylase    TDE1041 ribonuclease HII    ML1611 tRNA CCA-pyrophosphorylase    SMU_901 glutamyl-tRNA synthetase    THEYE_A2003 methionyl-tRNA synthetase    O3K_08875 Putative cleavage and polyadenylation specificity factor subunit 4-like protein ribonuclease III    ECUMN_2888 alanyl-tRNA synthetase    FN0697 Inosine-5'-monophosphate dehydrogenase 2 Inosine-5'-monophosphate dehydrogenase 1 DNA-(apurinic or apyrimidinic site) lyase hypothetical protein    smi_1586 gag-pol fusion protein YOL103W-B Polycomb protein Suz12 Splicing factor 1 gag-pol fusion protein YCL019W ribonuclease, Rne/Rng family protein    PSPTO_3841 alanyl-tRNA synthetase    BDGL_000426 RNA-binding protein MEX3B Probable ATP-dependent DNA helicase DDX11 Lysine-specific demethylase 2B Alanine--tRNA ligase    FP1941 Poly(A) polymerase alpha 50S ribosomal protein L31    EAE_07585 TRAMP complex RNA-binding subunit YDL175C Poly(A) polymerase gamma Poly(A) polymerase alpha Poly(A) RNA polymerase, mitochondrial Protein lin-28 homolog A 50S ribosomal protein L31    HI0758 alanyl-tRNA synthetase    YE0834 RNA-binding protein 5 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    YE0743 alanyl-tRNA synthetase    YPO3305 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 gag-pol fusion protein YPR158W-B ribonuclease HIII    EF1267 Nanos homolog 1 Microprocessor complex subunit DGCR8 polynucleotide phosphorylase/polyadenylase    Caur_2047 Muscleblind-like protein 1 methionyl-tRNA synthetase    Psyr_3886 ribonuclease HII    CT_008 C->U-editing enzyme APOBEC-2 2'-5'-oligoadenylate synthase 1 ribonuclease H    Moth_0976 gag-pol fusion protein YPR158C-D U1 small nuclear ribonucleoprotein C 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    HI0333 ribonuclease E    NGR_c11120 50S ribosomal protein L31    SDY_3801 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    SDY_3002 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    FTT_0705 Bromodomain adjacent to zinc finger domain protein 2A Rho guanine nucleotide exchange factor 28 Interferon-induced helicase C domain-containing protein 1 Nanos homolog 3 ribonuclease J    MPN280 Nanos homolog 1 23S rRNA (uracil-C(5))-methyltransferase RlmCD    BSU06730 ribonuclease III    CA_C1748 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    BN112_0816 ribonuclease E    BP0475 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    NMB1241 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    lpg2742 alanine--tRNA ligase    BB_0220 Eyes absent homolog 1 m7GpppN-mRNA hydrolase ribonuclease III    MSMEG_2418 polynucleotide phosphorylase    NMB0758 ribonuclease III    gvip371 ribonuclease HII    Smed_0451 30S ribosomal protein S4    TTHA1665 ribonuclease HIII    L132875 polynucleotide phosphorylase/polyadenylase    SAOUHSC_01251 phenylalanyl-tRNA synthetase subunit beta    FN2122 Zinc finger matrin-type protein 1 primase-like protein    CA_C2987 alanyl-tRNA synthetase    SAOUHSC_01722 Zinc finger protein 36, C3H1 type-like 3 ribonuclease III    SRU_1343 methionine--tRNA ligase    HP0417 phenylalanine--tRNA ligase subunit beta    NGO0304 gag-pol fusion protein YDR210W-B metallo-beta-lactamase superfamily protein    SSUBM407_1379 polynucleotide phosphorylase/polyadenylase    EAE_04255 ribonuclease III    CBU_1503 ribonuclease    Smed_0957 23S rRNA (uracil-5-)-methyltransferase RumA    CTL0111 metallo-beta-lactamase superfamily protein    EF2924 alanyl-tRNA synthetase    LA_3407 polyribonucleotide nucleotidyltransferase    PSPTO_4486 alanyl-tRNA synthetase    RP856 Muscleblind-like protein 2 ribonuclease HII    Rru_A3209 alanyl-tRNA synthetase    Smed_1521 Breast cancer type 1 susceptibility protein homolog Alkylated DNA repair protein alkB homolog 8 ribonuclease III    VF_2087 RNA-metabolising metallo-beta-lactamase    CLC_1332 U1 small nuclear ribonucleoprotein C Interferon-induced helicase C domain-containing protein 1 Polyribonucleotide nucleotidyltransferase    FP2046 multifunctional CCA protein    CBU_1827 alanyl-tRNA synthetase    SMc00475 hypothetical protein    Mb2773c Small RNA 2'-O-methyltransferase ribonuclease III    BU258 alanyl-tRNA synthetase    LBA0417 mRNA-binding protein NAB2 YGL122C ribonuclease III    SMU_1514 ribonuclease E    FTT_1227 50S ribosomal protein L31    THEYE_A0367 ribonuclease H II    MSC_0430 Methionine--tRNA ligase    FP0055 ribonuclease III    MSC_0479 ribonuclease III    O3K_06575 ribonuclease HII    TM0915 Poly(U)-specific endoribonuclease ribonuclease HII    BN117_2452 ribonuclease HII    AHA_1187 hypothetical protein    gll3134 ribonuclease HII    CT2261 hypothetical protein    RP441 ribonuclease J    HP1430 ribonucleoprotein Ro/SS-A-like protein    DR_1262 RNA methyltransferase YfjO    BSU08020 phenylalanyl-tRNA synthetase subunit beta    EF1116 Ribonuclease HII    Pro_1658 Roquin-1 Tis11p YLR136C ribonuclease HII    MSMEG_2442 Transcriptional repressor protein YY1 Ribonuclease HII (RNase HII)    MAB_3222c ribonuclease HIII    CTL0263 ribonuclease III    LBA1297 phenylalanine--tRNA ligase subunit beta    CTL0736 30S ribosomal protein S14    SSUBM407_0079 Cytoplasmic polyadenylation element-binding protein 1 threonyl-tRNA synthetase    spr1472 Probable CRISPR-associated (Cas) protein. csn1 family, subtype Nmeni    FP1524 RNA methyltransferase    SAOUHSC_02113 Cleavage and polyadenylation specificity factor subunit 4 phenylalanyl-tRNA synthetase subunit beta    BC4560 ribonuclease HII    BB_0046 twitching motility protein PilT    MSMEG_1284 tRNA-specific adenosine deaminase 1 TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae), isoform CRA_c Alanine--tRNA ligase, mitochondrial Alanine--tRNA ligase, cytoplasmic Cleavage and polyadenylation specificity factor subunit 3 Phenylalanine--tRNA ligase beta subunit    FP1041 Zinc finger protein 638 RNA-binding protein 10 PR domain zinc finger protein 14 Bromodomain adjacent to zinc finger domain protein 2A E3 SUMO-protein ligase RanBP2 Yhc1p YLR298C ribonuclease HII    smi_1062 ribonuclease III    BT9727_3590 phenylalanyl-tRNA synthetase subunit beta    ECUMN_2004 polyribonucleotide nucleotidyltransferase    BB_0805 phenylalanine--tRNA ligase subunit beta    Cj0896c hypothetical protein    SE2291 methionyl-tRNA synthetase    BF4503 50S ribosomal protein L31    VF_2273 hypothetical protein    SAOUHSC_01035 ribonuclease E    NGO1785 Nrp1p YDL167C Zinc finger Ran-binding domain-containing protein 2 ribonuclease HII    FN1371 Zinc finger RNA-binding protein ribonuclease III    NGR_c08290 50S ribosomal protein L31    CLC_0183 Cytoplasmic aconitate hydratase ribonuclease III    SAG0723 alanyl-tRNA synthetase    SAG0810 phenylalanyl-tRNA synthetase subunit beta    LBA1518 ribonuclease HII    SAG1012 ribonuclease HII    FTT_1278c ribonuclease III    SSA_1561 ribonuclease III    NGO0259 polyribonucleotide nucleotidyltransferase    HMPREF0351_10160 Zinc finger protein 36, C3H1 type-like 2 polyribonucleotide nucleotidyltransferase    smi_1598 ribonuclease HII    AMED_1965 CCR4-NOT transcription complex subunit 8 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    AHA_0817 polynucleotide phosphorylase    Cj1253 ribonuclease III    lmo1805 metallo-beta-lactamase family protein    Cj1710c threonine--tRNA ligase    CT_581 metallo-beta-lactamase superfamily hydrolase    BT9727_3719 CCR4-NOT transcription complex subunit 4 Double-stranded RNA-specific editase 1 Zinc finger matrin-type protein 4 E3 ubiquitin-protein ligase TRIM21 Iron-responsive element-binding protein 2 Double-stranded RNA-specific editase B2 polynucleotide phosphorylase    TM1345 [cytidine(C)-cytidine(C)-adenosine (A)]-adding enzyme    SE1145 RNase III    bll5061 gag-pol fusion protein YIL082W-A Wilms tumor protein Ribonuclease 3 3'-5' exoribonuclease 1 Protein argonaute-2 ribonuclease III    PSPTO_4217 DNA/RNA-binding protein KIN17 alanine--tRNA ligase    BSU27410 ribonuclease HII    Rv2902c MORC family CW-type zinc finger protein 3 phenylalanyl-tRNA synthetase subunit beta    DVU2533 ribonuclease J 2    BSU16780 methionyl-tRNA synthetase    CT0969 topoisomerase-primase (TOPRIM) domain-containing protein    HMPREF0351_12254 U4/U6-U5 snRNP complex subunit SNU23 YDL098C ribonuclease HII    ECL_00986 4-hydroxy-3-methylbut-2-enyl diphosphate reductase    CA_C1847 CCR4-NOT core DEDD family RNase subunit POP2 YNR052C ribonuclease III    SSUBM407_0754 30S ribosomal protein S14    MSMEG_1468 CCR4-NOT transcription complex subunit 7 polyribonucleotide nucleotidyltransferase    THEYE_A1827 Zinc finger protein 385A Zinc finger protein 385B hypothetical protein    LBA0843 tRNA CCA-pyrophosphorylase    spr1413 gag-pol fusion protein YMR050C Ribonuclease H1 ribonuclease M5    BB_0626 Ribonuclease 3 tRNA (guanine(26)-N(2))-dimethyltransferase C->U-editing enzyme APOBEC-1 alanyl-tRNA synthetase    THEYE_A0536 Glucocorticoid receptor ribonuclease III    AHA_0800 cleavage polyadenylation factor subunit YSH1 YLR277C ribonuclease HII    CT_029 ribonuclease J    MPN621 Eukaryotic translation initiation factor 2 subunit 2 ribonuclease HIII    SSUBM407_0204 ribonuclease HII    SAOUHSC_01215 primase like    LBA0215 polynucleotide adenylyltransferase PAP1 YKR002W alanyl-tRNA synthetase    BT_3995 4-hydroxy-3-methylbut-2-enyl diphosphate reductase    Moth_1329 ribonuclease HIII    spr0365 hypothetical protein    lmo1434 phenylalanyl-tRNA synthetase subunit beta    aq_1730 RNA-binding protein 4B 23S rRNA (uracil(1939)-C(5))-methyltransferase    ECUMN_3114 30S ribosomal protein S14    TM1487 Telomerase reverse transcriptase RNAse HII    BDGL_000423 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 polynucleotide phosphorylase/polyadenylase    O3K_03110 50S ribosomal protein L31    PSPTO_5136 gag-pol fusion protein YML045W gag-pol fusion protein YLR410W-B 23S rRNA (uracil(1939)-C(5))-methyltransferase    O3K_05585 ribonuclease HII    SSUBM407_0922 polynucleotide phosphorylase/polyadenylase    aq_221 ribonuclease HIII    HMPREF0351_12106 dsRNA-specific ribonuclease/ribonuclease III    Pro_1762 Probable ATP-dependent RNA helicase DHX58 TRMT1-like protein cleavage polyadenylation factor RNA-binding subunit YTH1 YPR107C Cwc2p YDL209C Speckle targeted PIP5K1A-regulated poly(A) polymerase metallo-beta-lactamase    TTHA0252 ribonuclease HII    tll0663 30S ribosomal protein S14    DVU1316 metallo-beta-lactamase superfamily hydrolase    SSA_0312 gag-pol fusion protein YDR316W-B tRNA CCA-pyrophosphorylase    lmo1905 E3 ubiquitin-protein ligase TRIM32 glutamate--tRNA ligase    HI0274 methionyl-tRNA synthetase    SRU_1557 gag-pol fusion protein YER138C gag-pol fusion protein YDR034C-D 30S ribosomal protein S14    L0391 polyribonucleotide nucleotidyltransferase    BN117_3394 Protein lin-28 homolog A tRNA CCA-pyrophosphorylase    SSUBM407_1063 putative hydrolase of the metallo-beta-lactamase superfamily    RSP_2534 methionine--tRNA ligase    HI1276 alanyl-tRNA synthetase    SDY_2893 polynucleotide phosphorylase/polyadenylase    Psyr_4176 alanyl-tRNA synthetase    lpg1799 ribonuclease III    HMPREF0351_10101 tRNA (Uracil-5-)-methyltransferase    BC0364 50S ribosomal protein L31    PA5049 Iron-responsive element-binding protein 2 hypothetical protein    TTHA1493 alanyl-tRNA synthetase    L0343 alanyl-tRNA synthetase    Psyr_3556 Zinc finger protein 36, C3H1 type-like 2 7,8-dihydro-8-oxoguanine triphosphatase methionyl-tRNA synthetase    TDE1063 polynucleotide phosphorylase/polyadenylase    SRU_1773 Metallo-beta-lactamase superfamily hydrolase    Pro_1812 phenylalanyl-tRNA synthetase subunit beta    CA_C2356 ribonuclease III    BP2431 phenylalanyl-tRNA synthetase subunit beta    ML1402 50S ribosomal protein L31    FTT_0366 polynucleotide phosphorylase    RP504 methionyl-tRNA synthetase    BDGL_000047 alanyl-tRNA synthetase    spr1240 Polycomb protein SUZ12 polynucleotide phosphorylase/polyadenylase    L0325 hypothetical protein    smi_0294 Nanos homolog 3 Splicing factor U2AF 35 kDa subunit Poly(A) RNA polymerase, mitochondrial degrades RNA of DNA-RNA hybrids    VF_1948 DNA dC->dU-editing enzyme APOBEC-3F ribonuclease III    CT_297 ribonuclease HIII    SAG1722 isocitrate dehydrogenase (NAD(+)) IDH2 YOR136W bifunctional DRAP deaminase/tRNA pseudouridine synthase RIB2 YOL066C ribonuclease HII    EF1653 Ribonuclease HII    FP1200 rRNA methyltransferse    CT_742 hypothetical protein    Moth_1069 ribonuclease III    SAOUHSC_01203 Myc-associated zinc finger protein gag-pol fusion protein YBR012W-B truncated gag-pol fusion protein YAR009C threonyl-tRNA synthetase    BC4576 polyribonucleotide nucleotidyltransferase    CT_842 60S ribosomal protein L37 E3 ubiquitin-protein ligase UBR5 phenylalanyl-tRNA synthetase subunit beta    Mfl398 phenylalanyl-tRNA synthetase subunit beta    Rru_A3524 gag-pol fusion protein YHR214C-B 30S ribosomal protein S14    TTHA1679 metallo-beta lactamase hydrolase    Mfl092 60 kDa SS-A/Ro ribonucleoprotein phenylalanyl-tRNA synthetase subunit beta    CT0730 aconitate hydratase    DR_1720 ribonuclease HII    Cj0010c ribonuclease HII    CBU_1339 primase-related protein    spr1804 Splicing factor U2AF 26 kDa subunit CCR4-NOT transcription complex subunit 8 phenylalanyl-tRNA synthetase subunit beta    SRU_2807 DNA (cytosine-5)-methyltransferase 1 Probable ATP-dependent DNA helicase DDX11 phenylalanyl-tRNA synthetase subunit beta    HMPREF0421_20586 ribonuclease III    CT2119 ribonuclease HII    CA_C1762 Nocturnin methionyl-tRNA synthetase    FTT_1290 ribonuclease HII    lpg1373 Double-stranded RNA-specific adenosine deaminase metallo-beta-lactamase    TTHA1140 alanyl-tRNA synthetase    NMB1595 phenylalanyl-tRNA synthetase subunit beta    DR_2357 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 hypothetical protein    MSC_0003 gag-pol fusion protein YDR261C-D tRNA CCA-pyrophosphorylase    BU061 alanyl-tRNA synthetase    aq_1293 phenylalanyl-tRNA synthetase, beta chain    smi_1801 hypothetical protein    spr1717 30S ribosomal protein S14p/S29e    THEYE_A1433 Nanos homolog 2 Poly(U)-specific endoribonuclease ribonuclease H2 catalytic subunit RNH201 YNL072W Endonuclease V Zinc finger protein 239 Poly(A) polymerase beta aconitate hydratase    RP799 threonyl-tRNA synthetase    gvip395 polynucleotide phosphorylase    XCC2507 alanine--tRNA ligase    HI0814 polynucleotide phosphorylase    CA_C1808 Inosine-5'-monophosphate dehydrogenase 2 DNA-(apurinic or apyrimidinic site) lyase phenylalanyl-tRNA synthetase subunit beta    BU130 polynucleotide phosphorylase/polyadenylase    BL1546 7,8-dihydro-8-oxoguanine triphosphatase Alanyl-tRNA synthetase    MAB_2851c RNA methyltransferase    SMU_1779c Zinc finger CCCH domain-containing protein 8 Protein lin-28 homolog B phenylalanyl-tRNA synthetase subuit beta    THEYE_A1416 50S ribosomal protein L31    GSU3107 ribonuclease HIII    SE0833 50S ribosomal protein L31    RB9304 Poly(A) polymerase beta Poly(A) polymerase gamma 30S ribosomal protein S14    lmo2619 gag-pol fusion protein YPL257W-B glutamyl-tRNA synthetase    SCO5547 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 decapping enzyme complex catalytic subunit YNL118C gag-pol fusion protein YGR109W-B rpsN    BL1593 metallo-beta-lactamase superfamily protein    SSUBM407_0153 hypothetical protein    ML1512 phenylalanyl-tRNA synthetase subunit beta    ECIAI39_1340 Zinc finger CCCH-type antiviral protein 1 2-5A-dependent ribonuclease Glucosidase 2 subunit beta alanine--tRNA ligase YOR335C CCR4-NOT transcription complex subunit 4 30S ribosomal protein S14    BB_0491 CCR4-NOT transcription complex subunit 6 gag-pol fusion protein YBL100W-B aconitate hydratase    SMU_670 E3 ubiquitin-protein ligase TRIM21 gag-pol fusion protein YGR038C-B gag-pol fusion protein YOR192C-B ribosomal 60S subunit protein L37A YLR185W phenylalanyl-tRNA synthetase subunit beta    CBU_1321 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 50S ribosomal protein L31    ML1133 Microprocessor complex subunit DGCR8 alanyl-tRNA synthetase    tll2103 phenylalanyl-tRNA synthetase beta chain    BF2565 alanyl-tRNA synthetase    gvip323 phenylalanyl-tRNA synthetase subunit beta    TDE1927 Alpha-enolase ADP-sugar pyrophosphatase alanine--tRNA ligase    CTL0118 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 50S ribosomal protein L31    CA_C2888 50S ribosomal protein L31    NGO2126 isocitrate dehydrogenase (NAD(+)) IDH1 YNL037C ribonuclease J    Rv2752c Zinc finger matrin-type protein 2 Probable ATP-dependent RNA helicase DDX59 ribonuclease HII    NRG857_00935 ribonuclease M5    MPN072 polynucleotide phosphorylase/polyadenylase    SCO5737 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    SO_3456 Endoribonuclease Dicer tRNA nucleotidyltransferase    smi_1546 CCR4-NOT core ubiquitin-protein ligase subunit MOT2 YER068W 50S ribosomal protein L31    gvip574 3'-5' exoribonuclease 1 30S ribosomal protein S14    SAOUHSC_02499 metal dependent hydrolase    NGR_c10650 alanine--tRNA ligase    MPN418 tRNA nucleotidyltransferase    BN112_3207 E3 ubiquitin-protein ligase TRIM71 threonine--tRNA ligase    HI1367 pheT    BL1066 Protein lin-28 homolog B alanine--tRNA ligase    Rv2555c 50S ribosomal protein L31 RpmE    SO_4120 RNA-binding protein 27 alanyl-tRNA synthetase    CT0166 Pre-mRNA-splicing factor RBM22 ribonuclease III    YE1017 ribonuclease HII    BSU16060 DNA-binding protein SMUBP-2 50S ribosomal protein L31    TTHA1073 Probable ATP-dependent RNA helicase DDX41 alanyl-tRNA synthetase    SMU_650 Nocturnin ribonuclease HII    SCO5812 hypothetical protein    BL1192 Serine/arginine-rich splicing factor 7 DNA (cytosine-5)-methyltransferase 1 Cytoplasmic polyadenylation element-binding protein 1 Zinc finger matrin-type protein 3 Interferon-stimulated gene 20 kDa protein gag-pol fusion protein YLR157C-B Endonuclease V Alkylated DNA repair protein alkB homolog 8 gag-pol fusion protein YHL009W-B aconitate hydratase    SE1032 bifunctional guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase    Rv2783c Zinc finger CCHC-type and RNA-binding motif-containing protein 1 alanyl-tRNA synthetase    SSUBM407_0713 polynucleotide phosphorylase    SSUBM407_1792 phenylalanyl-tRNA synthetase subunit beta    SSA_0914 hypothetical protein    SAG0894 alanyl-tRNA synthetase    SSA_0756 decapping nuclease YGL246C alanyl-tRNA synthetase    ML0512 gag-pol fusion protein YOR142W-B ribonuclease HII    RP202 primase-like protein    CBO0080 tRNA-specific adenosine deaminase 1 30S ribosomal protein S14    SCO4715 50S ribosomal protein L31    HMPREF0421_20948 ribonuclease HII    SMU_994 Zinc finger CCCH domain-containing protein 8 ribonuclease III    BN117_3259 30S ribosomal protein S14    HMPREF0421_21270 ribonuclease III    AMED_1796 polynucleotide phosphorylase    BU373 DNA-binding protein SMUBP-2 Lysine-specific demethylase 2B ribonuclease III    EF3097 hypothetical protein    aq_1768 Matrin-3 RNA-binding protein 4 polynucleotide phosphorylase    FTT_0699 alanyl-tRNA synthetase AlaS    SO_3428 RNA-binding protein MEX3D Uncharacterized RNA methyltransferase lmo1751    lmo1751 RNA-binding protein 27 alanine--tRNA ligase    NGO1254 mRNA splicing protein MSL5 YLR116W phenylalanyl-tRNA synthetase subunit beta    Moth_1750 2'-5'-oligoadenylate synthase 3 phenylalanine--tRNA ligase subunit beta    HI1312 RNA-binding E3 ubiquitin-protein ligase MEX3C DNA primase and small primase-like proteins    FN0039 polynucleotide phosphorylase/polyadenylase    Rru_A3785 Zinc finger protein 346 threonyl-tRNA synthetase    CBU_1326 Wilms tumor protein homolog alanine--tRNA ligase    CT_749 BRCA1-associated RING domain protein 1 Diphosphoinositol polyphosphate phosphohydrolase 2 Splicing factor U2AF 35 kDa subunit-like protein Zinc finger matrin-type protein 4 Muscleblind-like protein 1 23S rRNA (uracil(1939)-C(5))-methyltransferase    VF_2081 ribonuclease HII    TDE1547 ADP-sugar pyrophosphatase Nucleolar protein of 40 kDa methionyl-tRNA synthetase    CA_C2991 50S ribosomal protein L31    Rv1298 ribonuclease HII    SE0922 Probable ATP-dependent RNA helicase DDX58 hypothetical protein    MSC_0300 phenylalanyl-tRNA synthetase subunit beta    LA_4035 Zinc finger Ran-binding domain-containing protein 2 RNA-binding protein MEX3B polynucleotide phosphorylase/polyadenylase    DR_2063 phenylalanyl-tRNA synthetase subunit beta    TTHA1959 phenylalanine--tRNA ligase subunit beta    BP2573 30S ribosomal protein S14    Moth_2447 Nuclear fragile X mental retardation-interacting protein 1 gag-pol fusion protein YLR227W-B 30S ribosomal protein S14    TDE0780 RNA-binding protein 4 Bifunctional endoribonuclease and deubiquitinase ZC3H12A Decapping and exoribonuclease protein Ribonuclease H2 subunit A ribonuclease HII    SRU_2372 hypothetical protein    tlr1220 50S ribosomal protein L36    DR_2124 methionyl-tRNA synthetase    TM1085 tRNA CCA-pyrophosphorylase    SSA_1086 Phenylalanyl-tRNA synthetase beta chain PheT    MAB_2335 Nanos homolog 2 Bifunctional protein polyribonucleotide nucleotidyltransferase GpsI    MAB_3106c Roquin-1 Probable ATP-dependent RNA helicase DDX59 Zinc finger CCCH-type antiviral protein 1 Regulator of nonsense transcripts 1 Decapping and exoribonuclease protein threonyl-tRNA synthetase    XCC2463 RNA methyltransferase    lmo1703 gag-pol fusion protein YLR035C-A phenylalanyl-tRNA synthetase subunit beta    lpg2710 polyribonucleotide nucleotidyltransferase    RSP_1112 Splicing factor 3A subunit 3 polynucleotide phosphorylase    CT1649 Transcriptional repressor protein YY1 ribonuclease HII    BT9727_3578 60S ribosomal protein L37 Telomerase reverse transcriptase 2'-5'-oligoadenylate synthase-like protein 2 alanyl-tRNA synthetase    SRU_1544 alanyl-tRNA synthetase    O3K_06095 2'-5'-oligoadenylate synthase 1A phenylalanyl-tRNA synthetase subunit beta    SSUBM407_0791 ribonuclease HII    L0320 methionyl-tRNA synthetase    YPO1522 phenylalanyl-tRNA synthetase subunit beta    MSC_0595 ribonuclease HIII    SSA_0352 ribonuclease III    TM1102 methionyl-tRNA synthetase    CLC_0123 alanyl-tRNA synthetase    BN112_0993 Splicing factor U2AF 35 kDa subunit U8 snoRNA-decapping enzyme ribonuclease HIII    BC4556 Serine/threonine-protein phosphatase 5 phenylalanyl-tRNA synthetase subunit beta    SAG0871 SF3a splicing factor complex subunit PRP9 YDL030W phenylalanyl-tRNA synthetase subunit beta    SAOUHSC_01093 RNase E    KPHS_19620 tRNA CCA-pyrophosphorylase    LBA0973 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    SDY_3239 30S ribosomal protein S14    Mb0738 phenylalanyl-tRNA synthetase subunit beta    RP418 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase    Pro_0965 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    lpg1456 alanyl-tRNA ligase    GSU0148 RNA-binding protein EWS ribonuclease III    SDY_2808 Rho guanine nucleotide exchange factor 28 Zinc finger matrin-type protein 2 gag-pol fusion protein YDR210C-D metallo-beta-lactamase superfamily hydrolase    HMPREF0351_12227 Transcription factor IIIA ribonuclease III    smi_1210 polynucleotide phosphorylase    SAG0203 30S ribosomal protein S14    HMPREF0351_10071 DIS3-like exonuclease 2 Zinc finger RNA-binding protein ribonuclease III    Cj1635c gag-pol fusion protein YMR045C alanyl-tRNA synthetase    Moth_1644 gag-pol fusion protein YJR027W phenylalanyl-tRNA synthetase subunit beta    L0355 alanyl-tRNA synthetase    smi_0749 alanyl-tRNA synthetase    BT9727_4121 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 Splicing factor U2AF 26 kDa subunit 50S ribosomal protein L31    BU577 alanine--tRNA ligase    HMPREF0351_11337 metallo-beta-lactamase superfamily protein    SAG1761 ribonuclease HII    BN112_0435 hypothetical protein    SMU_1405c ribonuclease HII    SSA_1188 Breast cancer type 1 susceptibility protein phenylalanyl-tRNA synthetase subunit beta    SMU_1510 hypothetical protein    L88730 RNA-binding protein 4B gag-pol fusion protein YJR029W multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    XCC3407 Transcription factor IIIA alanine--tRNA ligase    PP_4474 polynucleotide phosphorylase/polyadenylase    TTHA1139 gag-pol fusion protein YBL005W-B Zinc finger protein 239 ribonuclease III    NMB0686 CCR4-NOT core exoribonuclease subunit CCR4 YAL021C 50S ribosomal protein L31    TDE1504 ribonuclease III, ds RNA    BDGL_001989 2'-5'-oligoadenylate synthase 2 methionyl-tRNA synthetase    TTHA1298 phenylalanyl-tRNA synthetase subunit beta    NMB0728 Zinc finger protein 346 30S ribosomal protein S14    gvip522 ribonuclease E    NRG857_05230 RNA methyltransferase    tlr0942 RNA-binding protein 26 Dxo1p YDR370C 2'-5'-oligoadenylate synthase 3 CRISPR-associated Cas5e    TDE0327 alaS    BL0882 phenylalanyl-tRNA synthetase subunit beta    FTT_1002c 30S ribosomal protein S14    Mfl136 ribonuclease III    TDE1027 beta-lactamase domain-containing protein    Smed_0905 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD    Psyr_3696 methionyl-tRNA synthetase    DVU2055 ribonuclease III    SE0908 50S ribosomal protein L31    PP_5087 phenylalanyl-tRNA synthetase subunit beta    BT9727_4293 threonyl-tRNA synthetase    FN0611 gag-pol fusion protein YER160C threonyl-tRNA synthetase    SAOUHSC_01788 Double-stranded RNA-specific editase B2 phenylalanine--tRNA ligase subunit beta    MPN106 ribonuclease HII    HI1059 metallo-beta-lactamase family protein    BT9727_3538 m7GpppN-mRNA hydrolase gag-pol fusion protein YGR161C-D Serine/threonine-protein phosphatase 1 regulatory subunit 10 ribonuclease III    RB4925 Probable ATP-dependent RNA helicase DDX58 phenylalanyl-tRNA synthetase subunit beta    SCO1594 metal dependent hydrolase    FN1210 Double-stranded RNA-specific editase 1 Nuclear fragile X mental retardation-interacting protein 1 Arf-GAP domain and FG repeat-containing protein 1 ribonuclease HIII    smi_1736 GTPase YjeQ    TDE1449 RNA-binding E3 ubiquitin-protein ligase MEX3C DIS3-like exonuclease 2 ribonuclease HIII    SAOUHSC_01095 alanyl-tRNA synthetase    TM1396 ribonuclease HII    BT_3412 ribonuclease III    HI0014 polynucleotide phosphorylase    ML0854 aconitate hydratase    bll0466 RNA-binding protein MEX3D alanine--tRNA ligase    HMPREF0421_21093 Muscleblind-like protein 2 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    O3K_03670 alanine--tRNA ligase    HP1241 tRNA CCA-pyrophosphorylase    BP3059 Pre-mRNA-splicing factor RBM22 ribonuclease E    HI0413 Peroxisomal coenzyme A diphosphatase NUDT7 Small RNA 2'-O-methyltransferase methionyl-tRNA synthetase    BT_2933 50S ribosomal protein L31    Moth_2399 cytidylate kinase activity    SDY_3343 threonyl-tRNA synthetase    lmo1559 alanyl-tRNA synthetase    VC0545 RNA-binding protein 26 RNA methyltransferase    EF2706 Prp11p YDL043C Nucleolar protein 3 polynucleotide phosphorylase/polyadenylase    EF3064 phenylalanyl-tRNA synthetase subunit beta    BN112_1476 Beta-lactamase-like protein 2 CCR4-NOT transcription complex subunit 7 gag-pol fusion protein YOR343W-B Ribonuclease III Rnc    MAB_3256c E3 ubiquitin-protein ligase DZIP3 threonyl-tRNA synthetase    aq_1667 DNA dC->dU-editing enzyme APOBEC-3B polyribonucleotide nucleotidyltransferase    BF4326 polynucleotide phosphorylase/polyadenylase    HI0229 50S ribosomal protein L31    DVU2912 ribonuclease III    MPN545 alanyl-tRNA synthetase    Mfl613 Roquin-2 methionyl-tRNA synthetase    FN1268 gag-pol fusion protein YGR027W-B 30S ribosomal protein S14    SMU_2014 30S ribosomal protein S14    GSU2844 aconitate hydratase B    HP0779 tRNA (uracil-5-)-methyltransferase    LA_0292 polynucleotide phosphorylase    lpg2768 BRCA1-associated RING domain protein 1 polynucleotide phosphorylase    CBU_0852 RNA-binding protein 10 23S rRNA (uracil-5-)-methyltransferase RumA    Caur_1949 threonyl-tRNA synthetase    RB12129 rpmE    BL1711 DNA dC->dU-editing enzyme APOBEC-3G RING finger protein unkempt homolog gag-pol fusion protein YDR261W-B E3 ubiquitin-protein ligase UBR5 50S ribosomal protein L31    VC2679 glutamyl-tRNA synthetase-related protein    RB13261 tRNA (guanine(26)-N(2))-dimethyltransferase 2'-5'-oligoadenylate synthase 2 gag-pol fusion protein YNL284C-B ribonuclease HII    NGO1789 hypothetical protein    L61727 alanyl-tRNA synthetase    DR_2300 polyribonucleotide nucleotidyltransferase    CTL0214 ribonuclease III    FN0152 RNA methyltransferase    SAG0413 RNA-binding protein FUS alanyl-tRNA synthetase    BC4383 ribonuclease III    FTT_1555c Probable ATP-dependent RNA helicase DDX41 phenylalanine--tRNA ligase subunit beta    CT_475 Roquin-2 polyribonucleotide nucleotidyltransferase    PP_4708 rncS    BL0295 RNA-binding protein MEX3A 60 kDa SS-A/Ro ribonucleoprotein polynucleotide phosphorylase    HP1213 polynucleotide phosphorylase    BT9727_3548 RNase III    aq_946 Probable ATP-dependent RNA helicase DHX58 CRISPR-associated protein    Cj1523c 23S rRNA (uracil(1939)-C(5))-methyltransferase    EAE_01970 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 MORC family CW-type zinc finger protein 3 alanyl-tRNA synthetase    CBU_1052 50S ribosomal protein L31    NMB1956 RNA-binding protein FUS Phenylalanyl-tRNA synthetase beta subunit    Pro_0966 Alanine--tRNA ligase, cytoplasmic threonyl-tRNA synthetase    DR_2081 polynucleotide phosphorylase    gll3149 ribonuclease III    Psyr_3951 30S ribosomal protein S14    HP1306 metal-dependent hydrolase    GSU3113 Diphosphoinositol polyphosphate phosphohydrolase 2 ribonuclease III    RP117 ribonuclease III    Rv2925c aconitate hydratase    lpg1690 poly A polymerase    EF1558 Zinc finger protein 385C methionyl-tRNA synthetase    THEYE_A0382 Poly(A)-specific ribonuclease PARN hypothetical protein    SCO5745 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    NGO0763 phenylalanine--tRNA ligase subunit beta    HP0402 metallo-b-lactamase superfamily protein    LBA0828 tRNA CCA-pyrophosphorylase    SAG1341 alanyl-tRNA synthetase    Rru_A2818 Speckle targeted PIP5K1A-regulated poly(A) polymerase tRNA CCA-pyrophosphorylase    FTT_0108c Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 phenylalanyl-tRNA synthetase subunit beta    gvip406 alanyl-tRNA synthetase    Caur_3847 Cleavage and polyadenylation specificity factor subunit 4 hypothetical protein    SMU_368c ribonuclease HII    CTL0284 alanyl-tRNA synthetase    ECUMN_3018 methionyl-tRNA synthetase    lpg2882 ribonuclease III    GSU2228 30S ribosomal protein S14    SSA_2391 50S ribosomal protein L31    CBU_0905 ribonuclease III    ML1659 phenylalanyl-tRNA synthetase subunit beta    BN117_1920 ribonuclease III    LB_084 Peroxisomal coenzyme A diphosphatase NUDT7 ribonuclease E    BU347 50S ribosomal protein L31    BDGL_001895 E3 ubiquitin-protein ligase TRIM32 Zinc finger protein 74 glutamyl-tRNA synthetase    CLC_1146 TATA-binding protein-associated factor 2N alanyl-tRNA synthetase    TTHA1831 phenylalanyl-tRNA synthetase subunit beta    tll0662 alanyl-tRNA synthetase    TDE1659 Eyes absent homolog 1 Endogenous retrovirus group K member 9 Pol protein tRNA nucleotidyltransferase Cca    SO_1296 DNA primase    SSUBM407_1871 metallo-beta-lactamase    HMPREF0421_21191 putative mRNA-binding protein CTH1 YDR151C ribonuclease HII    HP1323 magnesium transport P-type atpase    LA_2221 Ribonuclease III    FP0202 glutamyl-tRNA synthetase-like protein    DR_1687 phenylalanyl-tRNA synthetase subunit beta    XCC2458 hypothetical protein    SMU_1444c methionine--tRNA ligase    BB_0587 threonyl-tRNA synthetase    VCA0287 ribonuclease HII    VC2246 gag-pol fusion protein YJL113W hypothetical protein    SAOUHSC_01252 E3 ubiquitin-protein ligase TRIM71 polyribonucleotide nucleotidyltransferase    HMPREF0421_20335 ribonuclease III    HMPREF0421_21131 30S ribosomal protein S14    Cj1694c 50S ribosomal protein L31    Cj0155c ribonuclease III    CTL0549 phenylalanyl-tRNA synthetase subunit beta    TM0822 RNA-binding protein 5 gag-pol fusion protein YDR098C-B Serine/threonine-protein phosphatase 1 regulatory subunit 10 Cytoplasmic aconitate hydratase ribonuclease III    Moth_0951 polynucleotide phosphorylase    tll2193 alanyl-tRNA synthetase    EF1379 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    Psyr_4634 Beta-lactamase-like protein 2 alanyl-tRNA synthetase    lmo1504 30S ribosomal protein S14    SRU_1048 50S ribosomal protein L31    YE0109 ribonuclease III    Smed_0682 Double-stranded RNA-specific adenosine deaminase ribonuclease HII    spr1044 U8 snoRNA-decapping enzyme ribonuclease HII    LBA0979 PR domain zinc finger protein 14 primase-like protein    SAG1781 Pzf1p YPR186C metallo-beta-lactamase superfamily protein    lp_2158 E3 SUMO-protein ligase RanBP2 DNA/RNA-binding protein KIN17 methionine--tRNA ligase    NGO2044 Zn-dependent hydrolase    BC3977 polynucleotide phosphorylase/polyadenylase    YE0438 50S ribosomal protein L31    TM1684
TRNA-specific adenosine deaminase 1, threonyl-tRNA synthetase XCC2463 and ribonuclease III TDE1027 have molecular function as metal ion binding and RNA binding
Nanos homolog 1 polynucleotide phosphorylase    TM1345 30S ribosomal protein S14    SSUBM407_0079 2-5A-dependent ribonuclease multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase    O3K_03670 50S ribosomal protein L31    BDGL_001895 hypothetical protein    BL1192 tRNA-specific adenosine deaminase 1 threonyl-tRNA synthetase    XCC2463 ribonuclease III    TDE1027
action filter_type
action intersection
action find_reverse
entity metal ion binding
relation molecular function
action find_reverse
entity RNA binding
relation molecular function
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'molecular function', 'metal ion binding'], [{'concept': 'nutrient'}, 'molecular function', 'RNA binding']]}
SELECT DISTINCT ?j WHERE { ?j property:molecular_function resource:metal_ion_binding . ?j property:molecular_function resource:RNA_binding . ?j rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q1057 Q181394
USER
Which metabolic processes are a biological processes that atmost 12853 nutrients are involved in ?
(c(Q181394),P682,c(Q1057))
action atmost
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
value 12853
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?z WHERE { { SELECT DISTINCT ?z ( COUNT ( ?o ) AS ?d ) WHERE { ?o property:P682 ?z . ?z rdf:type ontology:Q1057 . ?o rdf:type ontology:Q181394 } GROUP BY ?z } . FILTER ( ?d <= 12853 ) }
action atmost
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
value 12853
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?z WHERE { { SELECT DISTINCT ?z ( COUNT ( ?o ) AS ?d ) WHERE { ?o property:biological_process ?z . ?z rdf:type ontology:metabolic_process . ?o rdf:type ontology:nutrient } GROUP BY ?z } . FILTER ( ?d <= 12853 ) }
[]
metabolic process nutrient
Q22251129 Q14905693 Q133895
SYSTEM
proteolysis in other organism, translational initiation, tricarboxylic acid cycle
Q14864889 Q14907628 Q14913194 Q22274727 Q22251129 Q14905693 Q14860777 Q21134382 Q21097138 Q14819379 Q21759902 Q21133617 Q133895 Q21157940 Q21116483 Q14863351 Q21102358 Q21114210 Q14907178 Q21121151 Q14880758 Q21761098 Q14762260 Q22275051 Q21100626 Q14913439 Q14916189 Q14349667 Q21159531 Q21111970 Q898365 Q22274640 Q22279483 Q21119973 Q14865941 Q22282595 Q14907180 Q14907181 Q14905125 Q21096256 Q14863432 Q14902250 Q21124879 Q14909347 Q15313450 Q179924 Q21101220 Q21095286 Q14863986 Q14358591 Q838181 Q21116485 Q14859896 Q21103172 Q22276072 Q14914233 Q14897831 Q14645736 Q14864262 Q14859628 Q14819787 Q21119193 Q22274791 Q14819781 Q22279537 Q22283508 Q14327719 Q22279533 Q21124620 Q14860507 Q21112195 Q14890104 Q14864417 Q14864414 Q21759328 Q900386 Q14912265 Q21760838
(c(Q181394),P682,c(Q1057))
action atmost
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
value 12853
[ANSWERS] are a biological processes that atmost 12853 nutrients are involved in
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?z WHERE { { SELECT DISTINCT ?z ( COUNT ( ?o ) AS ?d ) WHERE { ?o property:P682 ?z . ?z rdf:type ontology:Q1057 . ?o rdf:type ontology:Q181394 } GROUP BY ?z } . FILTER ( ?d <= 12853 ) }
cellular aromatic compound metabolic process multicellular organism metabolic process cellular ketone body metabolic process secondary metabolic process proteolysis in other organism translational initiation hormone biosynthetic process cofactor metabolic process cellular aldehyde metabolic process one-carbon metabolic process carbon fixation actin modification tricarboxylic acid cycle nitrobenzene metabolic process lymphotoxin A biosynthetic process signal transduction by protein phosphorylation sulfur compound metabolic process regulation of translational initiation by eIF2 alpha dephosphorylation interleukin-2 biosynthetic process reactive nitrogen species metabolic process nucleobase-containing compound metabolic process photosynthesis carbohydrate metabolic process halogenated hydrocarbon metabolic process peptidyl-lysine modification to peptidyl-hypusine organophosphate metabolic process organic acid metabolic process lipid metabolic process selenium compound metabolic process reactive oxygen species biosynthetic process glycosylation cellular biosynthetic process cellular macromolecule metabolic process oxygen metabolic process connective tissue growth factor biosynthetic process ketone body metabolic process interleukin-13 biosynthetic process granulocyte macrophage colony-stimulating factor biosynthetic process neurotransmitter metabolic process cellular carbohydrate metabolic process reactive oxygen species metabolic process telomere maintenance via semi-conservative replication interleukin-8 biosynthetic process flavonoid metabolic process methylation-dependent chromatin silencing bioluminescence wax biosynthetic process amyloid fibril formation hormone catabolic process xenobiotic metabolic process respiratory burst interleukin-6 biosynthetic process cellular amino acid metabolic process DNA protection glycosyl compound metabolic process phosphatidic acid metabolic process isotype switching thyroid hormone metabolic process protein metabolic process cellular lipid metabolic process peptide hormone processing cellular modified amino acid metabolic process organic cyclic compound metabolic process generation of precursor metabolites and energy viral RNA genome replication IRES-dependent viral translational initiation small molecule metabolic process transposon integration transposition, DNA-mediated receptor internalization patched ligand maturation toxin metabolic process heterocycle metabolic process drug metabolic process cellular catabolic process demethylation cellular ketone metabolic process phosphorus metabolic process
Proteolysis in other organism, translational initiation and tricarboxylic acid cycle are a biological processes that atmost 12853 nutrients are involved in
proteolysis in other organism translational initiation tricarboxylic acid cycle
action atmost
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
value 12853
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?z WHERE { { SELECT DISTINCT ?z ( COUNT ( ?o ) AS ?d ) WHERE { ?o property:biological_process ?z . ?z rdf:type ontology:metabolic_process . ?o rdf:type ontology:nutrient } GROUP BY ?z } . FILTER ( ?d <= 12853 ) }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Logical operators
Q21985834
P680
Q44424 Q2996394
USER
How many chemical bonds and biological processes represents the molecular function of Nanos homolog 1 ?
(Q21985834,P680,c(Q44424)) (Q21985834,P680,c(Q2996394))
action count
action union
action filter_type
action find
entity Q21985834
relation P680
type Q44424
action filter_type
action find
entity Q21985834
relation P680
type Q2996394
['Q21985834', 'P680', {'concept': 'Q44424'}] ['Q21985834', 'P680', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?n ) WHERE { { resource:Q21985834 property:P680 ?l . ?l rdf:type ontology:Q44424 } UNION { ?l rdf:type ontology:Q2996394 . resource:Q21985834 property:P680 ?l } }
Nanos homolog 1
action count
action union
action filter_type
action find
entity Nanos homolog 1
relation molecular function
type chemical bond
action filter_type
action find
entity Nanos homolog 1
relation molecular function
type biological process
['Nanos homolog 1', 'molecular function', {'concept': 'chemical bond'}] ['Nanos homolog 1', 'molecular function', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?n ) WHERE { { resource:Nanos_homolog_1 property:molecular_function ?l . ?l rdf:type ontology:chemical_bond } UNION { ?l rdf:type ontology:biological_process . resource:Nanos_homolog_1 property:molecular_function ?l } }
[]
chemical bond biological process
SYSTEM
2 chemical bonds and 1 biological processes
Q14633865 Q14860489 Q13667380
(Q21985834,P680,c(Q44424)) (Q21985834,P680,c(Q2996394))
action count
action union
action filter_type
action find
entity Q21985834
relation P680
type Q44424
action filter_type
action find
entity Q21985834
relation P680
type Q2996394
[ANSWER]
['Q21985834', 'P680', {'concept': 'Q44424'}] ['Q21985834', 'P680', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?n ) WHERE { { resource:Q21985834 property:P680 ?l . ?l rdf:type ontology:Q44424 } UNION { ?l rdf:type ontology:Q2996394 . resource:Q21985834 property:P680 ?l } }
zinc ion binding molecular function metal ion binding
2 chemical bonds and 1 biological processes
action count
action union
action filter_type
action find
entity Nanos homolog 1
relation molecular function
type chemical bond
action filter_type
action find
entity Nanos homolog 1
relation molecular function
type biological process
['Nanos homolog 1', 'molecular function', {'concept': 'chemical bond'}] ['Nanos homolog 1', 'molecular function', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?n ) WHERE { { resource:Nanos_homolog_1 property:molecular_function ?l . ?l rdf:type ontology:chemical_bond } UNION { ?l rdf:type ontology:biological_process . resource:Nanos_homolog_1 property:molecular_function ?l } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21985834
P681
Q15989253
USER
Which is the cell component of Nanos homolog 1 ?
(Q21985834,P681,c(Q15989253))
action filter_type
action find
entity Q21985834
relation P681
type Q15989253
['Q21985834', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { resource:Q21985834 property:P681 ?n . ?n rdf:type ontology:Q15989253 }
Nanos homolog 1
action filter_type
action find
entity Nanos homolog 1
relation cell component
type part
['Nanos homolog 1', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { resource:Nanos_homolog_1 property:cell_component ?n . ?n rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q21985834,P681,c(Q15989253))
action filter_type
action find
entity Q21985834
relation P681
type Q15989253
The cell component of Nanos homolog 1 is the [ANSWER]
['Q21985834', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { resource:Q21985834 property:P681 ?n . ?n rdf:type ontology:Q15989253 }
cytoplasm
The cell component of Nanos homolog 1 is the cytoplasm
cytoplasm
action filter_type
action find
entity Nanos homolog 1
relation cell component
type part
['Nanos homolog 1', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { resource:Nanos_homolog_1 property:cell_component ?n . ?n rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q24124004 Q23592115
P680
Q44424
USER
Which chemical bonds represents the molecular function of 50S ribosomal protein L31    BDGL_001895 or sulfite reductase    BP3432 ?
OR((Q23592115,P680,c(Q44424)), (Q24124004,P680,c(Q44424)))
action filter_type
action union
action find
entity Q23592115
relation P680
action find
entity Q24124004
relation P680
type Q44424
{'OR': [['Q23592115', 'P680', {'concept': 'Q44424'}], ['Q24124004', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?z WHERE { { ?t property:P680 ?z . VALUES ( ?t ) { ( resource:Q23592115 ) ( resource:Q24124004 ) } } . ?z rdf:type ontology:Q44424 }
sulfite reductase    BP3432 50S ribosomal protein L31    BDGL_001895
action filter_type
action union
action find
entity 50S ribosomal protein L31    BDGL_001895
relation molecular function
action find
entity sulfite reductase    BP3432
relation molecular function
type chemical bond
{'OR': [['50S ribosomal protein L31    BDGL_001895', 'molecular function', {'concept': 'chemical bond'}], ['sulfite reductase    BP3432', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?z WHERE { { ?t property:molecular_function ?z . VALUES ( ?t ) { ( resource:50S_ribosomal_protein_L31____BDGL_001895 ) ( resource:sulfite_reductase____BP3432 ) } } . ?z rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380
SYSTEM
metal ion binding
Q13667380
OR((Q23592115,P680,c(Q44424)), (Q24124004,P680,c(Q44424)))
action filter_type
action union
action find
entity Q23592115
relation P680
action find
entity Q24124004
relation P680
type Q44424
The [ANSWER] represents the molecular function of 50S ribosomal protein L31 BDGL_001895 or sulfite reductase BP3432
{'OR': [['Q23592115', 'P680', {'concept': 'Q44424'}], ['Q24124004', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?z WHERE { { ?t property:P680 ?z . VALUES ( ?t ) { ( resource:Q23592115 ) ( resource:Q24124004 ) } } . ?z rdf:type ontology:Q44424 }
metal ion binding
The metal ion binding represents the molecular function of 50S ribosomal protein L31 BDGL_001895 or sulfite reductase BP3432
metal ion binding
action filter_type
action union
action find
entity 50S ribosomal protein L31    BDGL_001895
relation molecular function
action find
entity sulfite reductase    BP3432
relation molecular function
type chemical bond
{'OR': [['50S ribosomal protein L31    BDGL_001895', 'molecular function', {'concept': 'chemical bond'}], ['sulfite reductase    BP3432', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?z WHERE { { ?t property:molecular_function ?z . VALUES ( ?t ) { ( resource:50S_ribosomal_protein_L31____BDGL_001895 ) ( resource:sulfite_reductase____BP3432 ) } } . ?z rdf:type ontology:chemical_bond }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Indirect
P680
Q44424 Q181394
USER
Which chemical bonds represent molecular function of less number of nutrients than that chemical bond ?
(c(Q181394),P680,c(Q44424))
action less
action find_reverse_tuple_counts
relation P680
type Q44424
type Q181394
action count
action filter_type
action find_reverse
entity Q13667380
relation P680
type Q181394
[{'concept': 'Q181394'}, 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?o ) AS ?r ) WHERE { ?o property:P680 ?y . ?y rdf:type ontology:Q44424 . ?o rdf:type ontology:Q181394 } GROUP BY ?y } . { SELECT DISTINCT ( COUNT ( ?l ) AS ?m ) WHERE { ?l property:P680 resource:Q13667380 . ?l rdf:type ontology:Q181394 } } . FILTER ( ?r < ?m ) }
action less
action find_reverse_tuple_counts
relation molecular function
type chemical bond
type nutrient
action count
action filter_type
action find_reverse
entity metal ion binding
relation molecular function
type nutrient
[{'concept': 'nutrient'}, 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?o ) AS ?r ) WHERE { ?o property:molecular_function ?y . ?y rdf:type ontology:chemical_bond . ?o rdf:type ontology:nutrient } GROUP BY ?y } . { SELECT DISTINCT ( COUNT ( ?l ) AS ?m ) WHERE { ?l property:molecular_function resource:metal_ion_binding . ?l rdf:type ontology:nutrient } } . FILTER ( ?r < ?m ) }
[]
chemical bond nutrient
Q14817980 Q14633865 Q14914136
SYSTEM
copper ion binding, zinc ion binding, cadmium ion binding
Q14873956 Q14860850 Q14358439 Q14916240 Q14863979 Q14873986 Q14819477 Q14859885 Q14633865 Q14817980 Q14865842 Q14907682 Q14633862 Q14763001 Q14914136
(c(Q181394),P680,c(Q44424))
action less
action find_reverse_tuple_counts
relation P680
type Q44424
type Q181394
action count
action filter_type
action find_reverse
entity Q13667380
relation P680
type Q181394
[ANSWERS] represent molecular function of less number of nutrients than that chemical bond
[{'concept': 'Q181394'}, 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?o ) AS ?r ) WHERE { ?o property:P680 ?y . ?y rdf:type ontology:Q44424 . ?o rdf:type ontology:Q181394 } GROUP BY ?y } . { SELECT DISTINCT ( COUNT ( ?l ) AS ?m ) WHERE { ?l property:P680 resource:Q13667380 . ?l rdf:type ontology:Q181394 } } . FILTER ( ?r < ?m ) }
potassium ion binding magnesium ion binding iron ion binding molybdenum ion binding chloride ion binding manganese ion binding mercury ion binding phosphate ion binding zinc ion binding copper ion binding transition metal ion binding sodium ion binding calcium ion binding cobalt ion binding cadmium ion binding
Copper ion binding, zinc ion binding and cadmium ion binding represent molecular function of less number of nutrients than that chemical bond
copper ion binding zinc ion binding cadmium ion binding
action less
action find_reverse_tuple_counts
relation molecular function
type chemical bond
type nutrient
action count
action filter_type
action find_reverse
entity metal ion binding
relation molecular function
type nutrient
[{'concept': 'nutrient'}, 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?o ) AS ?r ) WHERE { ?o property:molecular_function ?y . ?y rdf:type ontology:chemical_bond . ?o rdf:type ontology:nutrient } GROUP BY ?y } . { SELECT DISTINCT ( COUNT ( ?l ) AS ?m ) WHERE { ?l property:molecular_function resource:metal_ion_binding . ?l rdf:type ontology:nutrient } } . FILTER ( ?r < ?m ) }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q21987727
P680
Q181394
USER
Do Metallothionein-3 have molecular function as those chemical bonds ?
(Q21987727,P680,Q14817980) (Q21987727,P680,Q14633865) (Q21987727,P680,Q14914136)
action is_in
entity prev_answer
action find
entity Q21987727
relation P680
['Q21987727', 'P680', 'Q14817980'] ['Q21987727', 'P680', 'Q14633865'] ['Q21987727', 'P680', 'Q14914136']
ASK WHERE { resource:Q21987727 property:P680 ?i . VALUES ( ?i ) { ( resource:Q14873956 ) ( resource:Q14860850 ) ( resource:Q14358439 ) } }
Metallothionein-3
action is_in
entity prev_answer
action find
entity Metallothionein-3
relation molecular function
['Metallothionein-3', 'molecular function', 'copper ion binding'] ['Metallothionein-3', 'molecular function', 'zinc ion binding'] ['Metallothionein-3', 'molecular function', 'cadmium ion binding']
ASK WHERE { resource:Metallothionein-3 property:molecular_function ?i . VALUES ( ?i ) { ( resource:potassium_ion_binding ) ( resource:magnesium_ion_binding ) ( resource:iron_ion_binding ) } }
[]
nutrient
SYSTEM
YES
(Q21987727,P680,Q14817980) (Q21987727,P680,Q14633865) (Q21987727,P680,Q14914136)
action is_in
entity prev_answer
action find
entity Q21987727
relation P680
[ANSWER]
['Q21987727', 'P680', 'Q14817980'] ['Q21987727', 'P680', 'Q14633865'] ['Q21987727', 'P680', 'Q14914136']
ASK WHERE { resource:Q21987727 property:P680 ?i . VALUES ( ?i ) { ( resource:Q14873956 ) ( resource:Q14860850 ) ( resource:Q14358439 ) } }
Yes
action is_in
entity prev_answer
action find
entity Metallothionein-3
relation molecular function
['Metallothionein-3', 'molecular function', 'copper ion binding'] ['Metallothionein-3', 'molecular function', 'zinc ion binding'] ['Metallothionein-3', 'molecular function', 'cadmium ion binding']
ASK WHERE { resource:Metallothionein-3 property:molecular_function ?i . VALUES ( ?i ) { ( resource:potassium_ion_binding ) ( resource:magnesium_ion_binding ) ( resource:iron_ion_binding ) } }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q21985834 Q18302825
P702
Q863908
USER
Is Nanos1 the gene that encodes Nanos homolog 1 ?
(Q21985834,P702,Q18302825)
action is_in
entity Q18302825
action find
entity Q21985834
relation P702
['Q21985834', 'P702', 'Q18302825']
ASK WHERE { resource:Q21985834 property:P702 resource:Q18302825 }
Nanos homolog 1 Nanos1
action is_in
entity Nanos1
action find
entity Nanos homolog 1
relation encoded by
['Nanos homolog 1', 'encoded by', 'Nanos1']
ASK WHERE { resource:Nanos_homolog_1 property:encoded_by resource:Nanos1 }
[]
nucleic acid sequence
SYSTEM
YES
(Q21985834,P702,Q18302825)
action is_in
entity Q18302825
action find
entity Q21985834
relation P702
[ANSWER]
['Q21985834', 'P702', 'Q18302825']
ASK WHERE { resource:Q21985834 property:P702 resource:Q18302825 }
Yes
action is_in
entity Nanos1
action find
entity Nanos homolog 1
relation encoded by
['Nanos homolog 1', 'encoded by', 'Nanos1']
ASK WHERE { resource:Nanos_homolog_1 property:encoded_by resource:Nanos1 }
[]