Simple Question (Direct)
Simple Question
Q21116384
P703
Q16521
USER
Where is Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase found ?
(Q21116384,P703,c(Q16521))
action filter_type
action find
entity Q21116384
relation P703
type Q16521
['Q21116384', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q16521 . resource:Q21116384 property:P703 ?b }
Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
action filter_type
action find
entity Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
relation found in taxon
type taxon
['Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:taxon . resource:Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol_alpha-1,2-glucosyltransferase property:found_in_taxon ?b }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21116384,P703,c(Q16521))
action filter_type
action find
entity Q21116384
relation P703
type Q16521
Dol-P-Glc: Glc ( 2 ) Man( 9) is found in [ANSWER]
['Q21116384', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q16521 . resource:Q21116384 property:P703 ?b }
Homo sapiens
Dol-P-Glc: Glc ( 2 ) Man( 9) is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
relation found in taxon
type taxon
['Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:taxon . resource:Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol_alpha-1,2-glucosyltransferase property:found_in_taxon ?b }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21116384
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q15978631)
action filter_type
action find_reverse
entity Q21116384
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q15978631']
SELECT DISTINCT ?b WHERE { ?b property:P688 resource:Q21116384 . ?b rdf:type ontology:Q863908 }
Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
action filter_type
action find_reverse
entity Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Homo sapiens']
SELECT DISTINCT ?b WHERE { ?b property:encodes resource:Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol_alpha-1,2-glucosyltransferase . ?b rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18047881
SYSTEM
ALG10
Q18047881
(c(Q863908),P688,Q15978631)
action filter_type
action find_reverse
entity Q21116384
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q15978631']
SELECT DISTINCT ?b WHERE { ?b property:P688 resource:Q21116384 . ?b rdf:type ontology:Q863908 }
ALG10
ALG10 encodes that nutrient
ALG10
action filter_type
action find_reverse
entity Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Homo sapiens']
SELECT DISTINCT ?b WHERE { ?b property:encodes resource:Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol_alpha-1,2-glucosyltransferase . ?b rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q21116384
P681
Q5058355
USER
How many cellular components are the components of Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase ?
(Q21116384,P681,c(Q5058355))
action count
action filter_type
action find
entity Q21116384
relation P681
type Q5058355
['Q21116384', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?n ) WHERE { ?d rdf:type ontology:Q5058355 . resource:Q21116384 property:P681 ?d }
Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
action count
action filter_type
action find
entity Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
relation cell component
type cellular component
['Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?n ) WHERE { ?d rdf:type ontology:cellular_component . resource:Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol_alpha-1,2-glucosyltransferase property:cell_component ?d }
[]
cellular component
SYSTEM
2
Q79927 Q14329032
(Q21116384,P681,c(Q5058355))
action count
action filter_type
action find
entity Q21116384
relation P681
type Q5058355
[ANSWER]
['Q21116384', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?n ) WHERE { ?d rdf:type ontology:Q5058355 . resource:Q21116384 property:P681 ?d }
endoplasmic reticulum endoplasmic reticulum membrane
2
action count
action filter_type
action find
entity Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
relation cell component
type cellular component
['Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?n ) WHERE { ?d rdf:type ontology:cellular_component . resource:Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol_alpha-1,2-glucosyltransferase property:cell_component ?d }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q22677529
P681
Q5058355
USER
And also tell me about Anion exchange transporter?
(Q22677529,P681,c(Q5058355))
action count
action filter_type
action find
entity Q22677529
relation P681
type Q5058355
['Q22677529', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?i ) WHERE { resource:Q22677529 property:P681 ?n . ?n rdf:type ontology:Q5058355 }
Anion exchange transporter
action count
action filter_type
action find
entity Anion exchange transporter
relation cell component
type cellular component
['Anion exchange transporter', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?i ) WHERE { resource:Anion_exchange_transporter property:cell_component ?n . ?n rdf:type ontology:cellular_component }
[]
cellular component
SYSTEM
1
Q29548
(Q22677529,P681,c(Q5058355))
action count
action filter_type
action find
entity Q22677529
relation P681
type Q5058355
[ANSWER]
['Q22677529', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?i ) WHERE { resource:Q22677529 property:P681 ?n . ?n rdf:type ontology:Q5058355 }
plasma membrane
1
action count
action filter_type
action find
entity Anion exchange transporter
relation cell component
type cellular component
['Anion exchange transporter', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?i ) WHERE { resource:Anion_exchange_transporter property:cell_component ?n . ?n rdf:type ontology:cellular_component }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q22991512
Q5058355
USER
And also tell me about ATP synthase protein I    PP_5420?
(Q22991512,P681,c(Q5058355))
action count
action filter_type
action find
entity Q22991512
relation P681
type Q5058355
['Q22991512', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?i ) WHERE { resource:Q22991512 property:P681 ?s . ?s rdf:type ontology:Q5058355 }
ATP synthase protein I    PP_5420
action count
action filter_type
action find
entity ATP synthase protein I    PP_5420
relation cell component
type cellular component
['ATP synthase protein I    PP_5420', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?i ) WHERE { resource:ATP_synthase_protein_I____PP_5420 property:cell_component ?s . ?s rdf:type ontology:cellular_component }
[]
cellular component
SYSTEM
1
(Q22991512,P681,c(Q5058355))
action count
action filter_type
action find
entity Q22991512
relation P681
type Q5058355
[ANSWER]
['Q22991512', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?i ) WHERE { resource:Q22991512 property:P681 ?s . ?s rdf:type ontology:Q5058355 }
1
action count
action filter_type
action find
entity ATP synthase protein I    PP_5420
relation cell component
type cellular component
['ATP synthase protein I    PP_5420', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?i ) WHERE { resource:ATP_synthase_protein_I____PP_5420 property:cell_component ?s . ?s rdf:type ontology:cellular_component }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q79529 Q8386 Q181394
USER
Which nutrients interacts with atleast 41 chemical substances or drugs ?
(c(Q181394),P129,c(Q79529)|c(Q8386))
action atleast
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q8386
value 41
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ?q WHERE { { SELECT DISTINCT ?q ( COUNT ( ?v ) AS ?x ) WHERE { { ?q property:P129 ?v . ?q rdf:type ontology:Q181394 . ?v rdf:type ontology:Q79529 } UNION { ?q rdf:type ontology:Q181394 . ?v rdf:type ontology:Q8386 . ?q property:P129 ?v } } GROUP BY ?q } . FILTER ( ?x >= 41 ) }
action atleast
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
value 41
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'drug'}]]
SELECT DISTINCT ?q WHERE { { SELECT DISTINCT ?q ( COUNT ( ?v ) AS ?x ) WHERE { { ?q property:physically_interacts_with ?v . ?q rdf:type ontology:nutrient . ?v rdf:type ontology:chemical_substance } UNION { ?q rdf:type ontology:nutrient . ?v rdf:type ontology:drug . ?q property:physically_interacts_with ?v } } GROUP BY ?q } . FILTER ( ?x >= 41 ) }
[]
chemical substance drug nutrient
Q2034004 Q1949517 Q4639596
SYSTEM
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A, 5-hydroxytryptamine receptor 2B
Q309513 Q288797 Q4639596 Q21115051 Q21109355 Q21108118 Q21115046 Q21115043 Q1949517 Q21109363 Q2034004
(c(Q181394),P129,c(Q79529)|c(Q8386))
action atleast
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q8386
value 41
[ANSWERS] interact with atleast 41 chemical substances or drugs
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ?q WHERE { { SELECT DISTINCT ?q ( COUNT ( ?v ) AS ?x ) WHERE { { ?q property:P129 ?v . ?q rdf:type ontology:Q181394 . ?v rdf:type ontology:Q79529 } UNION { ?q rdf:type ontology:Q181394 . ?v rdf:type ontology:Q8386 . ?q property:P129 ?v } } GROUP BY ?q } . FILTER ( ?x >= 41 ) }
Histamine H1 receptor 5-hydroxytryptamine receptor 1B 5-hydroxytryptamine receptor 2B 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 7 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 6 D(2) dopamine receptor
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A and 5-hydroxytryptamine receptor 2B interact with atleast 41 chemical substances or drugs
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 2B
action atleast
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
value 41
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'drug'}]]
SELECT DISTINCT ?q WHERE { { SELECT DISTINCT ?q ( COUNT ( ?v ) AS ?x ) WHERE { { ?q property:physically_interacts_with ?v . ?q rdf:type ontology:nutrient . ?v rdf:type ontology:chemical_substance } UNION { ?q rdf:type ontology:nutrient . ?v rdf:type ontology:drug . ?q property:physically_interacts_with ?v } } GROUP BY ?q } . FILTER ( ?x >= 41 ) }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q7702355
P129
Q8386
USER
Does terguride can communicate with those nutrients ?
(Q7702355,P129,Q2034004) (Q7702355,P129,Q1949517) (Q7702355,P129,Q4639596)
action is_in
entity prev_answer
action find
entity Q7702355
relation P129
['Q7702355', 'P129', 'Q2034004'] ['Q7702355', 'P129', 'Q1949517'] ['Q7702355', 'P129', 'Q4639596']
ASK WHERE { resource:Q7702355 property:P129 ?c . VALUES ( ?c ) { ( resource:Q309513 ) ( resource:Q288797 ) ( resource:Q4639596 ) } }
terguride
action is_in
entity prev_answer
action find
entity terguride
relation physically interacts with
['terguride', 'physically interacts with', 'D(2) dopamine receptor'] ['terguride', 'physically interacts with', '5-hydroxytryptamine receptor 2A'] ['terguride', 'physically interacts with', '5-hydroxytryptamine receptor 2B']
ASK WHERE { resource:terguride property:physically_interacts_with ?c . VALUES ( ?c ) { ( resource:Histamine_H1_receptor ) ( resource:5-hydroxytryptamine_receptor_1B ) ( resource:5-hydroxytryptamine_receptor_2B ) } }
[]
drug
SYSTEM
YES
(Q7702355,P129,Q2034004) (Q7702355,P129,Q1949517) (Q7702355,P129,Q4639596)
action is_in
entity prev_answer
action find
entity Q7702355
relation P129
[ANSWER]
['Q7702355', 'P129', 'Q2034004'] ['Q7702355', 'P129', 'Q1949517'] ['Q7702355', 'P129', 'Q4639596']
ASK WHERE { resource:Q7702355 property:P129 ?c . VALUES ( ?c ) { ( resource:Q309513 ) ( resource:Q288797 ) ( resource:Q4639596 ) } }
Yes
action is_in
entity prev_answer
action find
entity terguride
relation physically interacts with
['terguride', 'physically interacts with', 'D(2) dopamine receptor'] ['terguride', 'physically interacts with', '5-hydroxytryptamine receptor 2A'] ['terguride', 'physically interacts with', '5-hydroxytryptamine receptor 2B']
ASK WHERE { resource:terguride property:physically_interacts_with ?c . VALUES ( ?c ) { ( resource:Histamine_H1_receptor ) ( resource:5-hydroxytryptamine_receptor_1B ) ( resource:5-hydroxytryptamine_receptor_2B ) } }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q21116384 Q79927
P681
Q5058355
USER
Is endoplasmic reticulum the cell component of Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase ?
(Q21116384,P681,Q79927)
action is_in
entity Q79927
action find
entity Q21116384
relation P681
['Q21116384', 'P681', 'Q79927']
ASK WHERE { resource:Q21116384 property:P681 resource:Q79927 }
Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase endoplasmic reticulum
action is_in
entity endoplasmic reticulum
action find
entity Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
relation cell component
['Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase', 'cell component', 'endoplasmic reticulum']
ASK WHERE { resource:Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol_alpha-1,2-glucosyltransferase property:cell_component resource:endoplasmic_reticulum }
[]
cellular component
SYSTEM
YES
(Q21116384,P681,Q79927)
action is_in
entity Q79927
action find
entity Q21116384
relation P681
[ANSWER]
['Q21116384', 'P681', 'Q79927']
ASK WHERE { resource:Q21116384 property:P681 resource:Q79927 }
Yes
action is_in
entity endoplasmic reticulum
action find
entity Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
relation cell component
['Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase', 'cell component', 'endoplasmic reticulum']
ASK WHERE { resource:Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol_alpha-1,2-glucosyltransferase property:cell_component resource:endoplasmic_reticulum }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q15978631 Q864016 Q19359631
P427
Q3343211
USER
Does Homo sapiens have binomen and Cereus sirinamensis - plate 8 in Trew 1733 as its taxonomic type ?
(Q15978631,P427,Q864016) (Q15978631,P427,Q19359631)
action is_in
entity Q15978631
action intersection
action find_reverse
entity Q864016
relation P427
action find_reverse
entity Q19359631
relation P427
['Q15978631', 'P427', 'Q864016'] ['Q15978631', 'P427', 'Q19359631']
ASK WHERE { resource:Q15978631 property:P427 resource:Q864016 . resource:Q15978631 property:P427 resource:Q19359631 }
Homo sapiens binomen Cereus sirinamensis - plate 8 in Trew 1733
action is_in
entity Homo sapiens
action intersection
action find_reverse
entity binomen
relation taxonomic type
action find_reverse
entity Cereus sirinamensis - plate 8 in Trew 1733
relation taxonomic type
['Homo sapiens', 'taxonomic type', 'binomen'] ['Homo sapiens', 'taxonomic type', 'Cereus sirinamensis - plate 8 in Trew 1733']
ASK WHERE { resource:Homo_sapiens property:taxonomic_type resource:binomen . resource:Homo_sapiens property:taxonomic_type resource:Cereus_sirinamensis_-_plate_8_in_Trew_1733 }
[]
zoological nomenclature
SYSTEM
NO
(Q15978631,P427,Q864016) (Q15978631,P427,Q19359631)
action is_in
entity Q15978631
action intersection
action find_reverse
entity Q864016
relation P427
action find_reverse
entity Q19359631
relation P427
[ANSWER]
['Q15978631', 'P427', 'Q864016'] ['Q15978631', 'P427', 'Q19359631']
ASK WHERE { resource:Q15978631 property:P427 resource:Q864016 . resource:Q15978631 property:P427 resource:Q19359631 }
No
action is_in
entity Homo sapiens
action intersection
action find_reverse
entity binomen
relation taxonomic type
action find_reverse
entity Cereus sirinamensis - plate 8 in Trew 1733
relation taxonomic type
['Homo sapiens', 'taxonomic type', 'binomen'] ['Homo sapiens', 'taxonomic type', 'Cereus sirinamensis - plate 8 in Trew 1733']
ASK WHERE { resource:Homo_sapiens property:taxonomic_type resource:binomen . resource:Homo_sapiens property:taxonomic_type resource:Cereus_sirinamensis_-_plate_8_in_Trew_1733 }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q1949517 Q2735334
P129
Q8386
USER
Does 5-hydroxytryptamine receptor 2A interact with Pralidoxime ?
(Q1949517,P129,Q2735334)
action is_in
entity Q2735334
action find
entity Q1949517
relation P129
['Q1949517', 'P129', 'Q2735334']
ASK WHERE { resource:Q1949517 property:P129 resource:Q2735334 }
5-hydroxytryptamine receptor 2A Pralidoxime
action is_in
entity Pralidoxime
action find
entity 5-hydroxytryptamine receptor 2A
relation physically interacts with
['5-hydroxytryptamine receptor 2A', 'physically interacts with', 'Pralidoxime']
ASK WHERE { resource:5-hydroxytryptamine_receptor_2A property:physically_interacts_with resource:Pralidoxime }
[]
drug
SYSTEM
NO
(Q1949517,P129,Q2735334)
action is_in
entity Q2735334
action find
entity Q1949517
relation P129
[ANSWER]
['Q1949517', 'P129', 'Q2735334']
ASK WHERE { resource:Q1949517 property:P129 resource:Q2735334 }
No
action is_in
entity Pralidoxime
action find
entity 5-hydroxytryptamine receptor 2A
relation physically interacts with
['5-hydroxytryptamine receptor 2A', 'physically interacts with', 'Pralidoxime']
ASK WHERE { resource:5-hydroxytryptamine_receptor_2A property:physically_interacts_with resource:Pralidoxime }
[]