Simple Question (Direct)
Simple Question
Q23445608
P703
Q631147
USER
Which taxon is 50S ribosomal protein L4    HI0778 a part of ?
(Q23445608,P703,c(Q631147))
action filter_type
action find
entity Q23445608
relation P703
type Q631147
['Q23445608', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?k WHERE { resource:Q23445608 property:P703 ?k . ?k rdf:type ontology:Q631147 }
50S ribosomal protein L4    HI0778
action filter_type
action find
entity 50S ribosomal protein L4    HI0778
relation found in taxon
type infraspecific name
['50S ribosomal protein L4    HI0778', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?k WHERE { resource:50S_ribosomal_protein_L4____HI0778 property:found_in_taxon ?k . ?k rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102948
SYSTEM
Haemophilus influenzae Rd KW20
Q21102948
(Q23445608,P703,c(Q631147))
action filter_type
action find
entity Q23445608
relation P703
type Q631147
[ANSWER] is 50S ribosomal protein L4 HI0778 a part of
['Q23445608', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?k WHERE { resource:Q23445608 property:P703 ?k . ?k rdf:type ontology:Q631147 }
Haemophilus influenzae Rd KW20
Haemophilus influenzae Rd KW20 is 50S ribosomal protein L4 HI0778 a part of
Haemophilus influenzae Rd KW20
action filter_type
action find
entity 50S ribosomal protein L4    HI0778
relation found in taxon
type infraspecific name
['50S ribosomal protein L4    HI0778', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?k WHERE { resource:50S_ribosomal_protein_L4____HI0778 property:found_in_taxon ?k . ?k rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23445608
P681
Q15989253
USER
Which is the cell component of that nutrient ?
(Q21102948,P681,c(Q15989253))
action filter_type
action find
entity Q23445608
relation P681
type Q15989253
['Q21102948', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q15989253 . resource:Q23445608 property:P681 ?c }
50S ribosomal protein L4    HI0778
action filter_type
action find
entity 50S ribosomal protein L4    HI0778
relation cell component
type part
['Haemophilus influenzae Rd KW20', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:part . resource:50S_ribosomal_protein_L4____HI0778 property:cell_component ?c }
[]
part
Q42244
SYSTEM
ribosome
Q42244
(Q21102948,P681,c(Q15989253))
action filter_type
action find
entity Q23445608
relation P681
type Q15989253
[ANSWER] is the cell component of that nutrient
['Q21102948', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q15989253 . resource:Q23445608 property:P681 ?c }
ribosome
Ribosome is the cell component of that nutrient
ribosome
action filter_type
action find
entity 50S ribosomal protein L4    HI0778
relation cell component
type part
['Haemophilus influenzae Rd KW20', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:part . resource:50S_ribosomal_protein_L4____HI0778 property:cell_component ?c }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23445608
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q42244)
action filter_type
action find_reverse
entity Q23445608
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q42244']
SELECT DISTINCT ?e WHERE { ?e property:P688 resource:Q23445608 . ?e rdf:type ontology:Q863908 }
50S ribosomal protein L4    HI0778
action filter_type
action find_reverse
entity 50S ribosomal protein L4    HI0778
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ribosome']
SELECT DISTINCT ?e WHERE { ?e property:encodes resource:50S_ribosomal_protein_L4____HI0778 . ?e rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23327370
SYSTEM
50S ribosomal protein L4    HI0778
Q23327370
(c(Q863908),P688,Q42244)
action filter_type
action find_reverse
entity Q23445608
relation P688
type Q863908
50S ribosomal protein L4 HI0778 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q42244']
SELECT DISTINCT ?e WHERE { ?e property:P688 resource:Q23445608 . ?e rdf:type ontology:Q863908 }
50S ribosomal protein L4    HI0778
50S ribosomal protein L4 HI0778 encodes that nutrient
50S ribosomal protein L4    HI0778
action filter_type
action find_reverse
entity 50S ribosomal protein L4    HI0778
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ribosome']
SELECT DISTINCT ?e WHERE { ?e property:encodes resource:50S_ribosomal_protein_L4____HI0778 . ?e rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23257162
Q863908
USER
And also tell me about amidase    Mb2912c?
(Q23257162,P688,c(Q863908))
action filter_type
action find
entity Q23257162
relation P688
type Q863908
['Q23257162', 'P688', {'concept': 'Q863908'}]
SELECT DISTINCT ?r WHERE { resource:Q23257162 property:P688 ?r . ?r rdf:type ontology:Q863908 }
amidase    Mb2912c
action filter_type
action find
entity amidase    Mb2912c
relation encodes
type nucleic acid sequence
['amidase    Mb2912c', 'encodes', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?r WHERE { resource:amidase____Mb2912c property:encodes ?r . ?r rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23257162
SYSTEM
amidase    Mb2912c
Q23257162
(Q23257162,P688,c(Q863908))
action filter_type
action find
entity Q23257162
relation P688
type Q863908
[ANSWER]
['Q23257162', 'P688', {'concept': 'Q863908'}]
SELECT DISTINCT ?r WHERE { resource:Q23257162 property:P688 ?r . ?r rdf:type ontology:Q863908 }
amidase    Mb2912c
amidase    Mb2912c
action filter_type
action find
entity amidase    Mb2912c
relation encodes
type nucleic acid sequence
['amidase    Mb2912c', 'encodes', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?r WHERE { resource:amidase____Mb2912c property:encodes ?r . ?r rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23257162
P702
Q863908
USER
Which gene encodes that one ?
(Q23257162,P702,c(Q863908))
action filter_type
action find
entity Q23257162
relation P702
type Q863908
['Q23257162', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q23257162 property:P702 ?c . ?c rdf:type ontology:Q863908 }
amidase    Mb2912c
action filter_type
action find
entity amidase    Mb2912c
relation encoded by
type nucleic acid sequence
['amidase    Mb2912c', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:amidase____Mb2912c property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23257162
SYSTEM
amidase    Mb2912c
Q23257162
(Q23257162,P702,c(Q863908))
action filter_type
action find
entity Q23257162
relation P702
type Q863908
Amidase Mb2912c encodes that one
['Q23257162', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q23257162 property:P702 ?c . ?c rdf:type ontology:Q863908 }
amidase    Mb2912c
Amidase Mb2912c encodes that one
amidase    Mb2912c
action filter_type
action find
entity amidase    Mb2912c
relation encoded by
type nucleic acid sequence
['amidase    Mb2912c', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:amidase____Mb2912c property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q23257162 Q21102984
P703
Q631147
USER
Is that nucleic acid sequence found in Mycobacterium bovis AF2122/97 ?
(Q23257162,P703,Q21102984)
action is_in
entity Q21102984
action find
entity Q23257162
relation P703
['Q23257162', 'P703', 'Q21102984']
ASK WHERE { resource:Q23257162 property:P703 resource:Q21102984 }
amidase    Mb2912c Mycobacterium bovis AF2122/97
action is_in
entity Mycobacterium bovis AF2122/97
action find
entity amidase    Mb2912c
relation found in taxon
['amidase    Mb2912c', 'found in taxon', 'Mycobacterium bovis AF2122/97']
ASK WHERE { resource:amidase____Mb2912c property:found_in_taxon resource:Mycobacterium_bovis_AF2122/97 }
[]
infraspecific name
SYSTEM
YES
(Q23257162,P703,Q21102984)
action is_in
entity Q21102984
action find
entity Q23257162
relation P703
[ANSWER]
['Q23257162', 'P703', 'Q21102984']
ASK WHERE { resource:Q23257162 property:P703 resource:Q21102984 }
Yes
action is_in
entity Mycobacterium bovis AF2122/97
action find
entity amidase    Mb2912c
relation found in taxon
['amidase    Mb2912c', 'found in taxon', 'Mycobacterium bovis AF2122/97']
ASK WHERE { resource:amidase____Mb2912c property:found_in_taxon resource:Mycobacterium_bovis_AF2122/97 }
[]