Simple Question (Direct)
Simple Question
Q21632816
P703
Q16521
USER
Which taxon is glutamate-1-semialdehyde aminotransferase    HP0306 found in ?
(Q21632816,P703,c(Q16521))
action filter_type
action find
entity Q21632816
relation P703
type Q16521
['Q21632816', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?x WHERE { resource:Q21632816 property:P703 ?x . ?x rdf:type ontology:Q16521 }
glutamate-1-semialdehyde aminotransferase    HP0306
action filter_type
action find
entity glutamate-1-semialdehyde aminotransferase    HP0306
relation found in taxon
type taxon
['glutamate-1-semialdehyde aminotransferase    HP0306', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?x WHERE { resource:glutamate-1-semialdehyde_aminotransferase____HP0306 property:found_in_taxon ?x . ?x rdf:type ontology:taxon }
[]
taxon
Q21065231
SYSTEM
Helicobacter pylori 26695
Q21065231
(Q21632816,P703,c(Q16521))
action filter_type
action find
entity Q21632816
relation P703
type Q16521
Glutamate-1-semialdehyde aminotransferase HP0306 is found in [ANSWER]
['Q21632816', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?x WHERE { resource:Q21632816 property:P703 ?x . ?x rdf:type ontology:Q16521 }
Helicobacter pylori 26695
Glutamate-1-semialdehyde aminotransferase HP0306 is found in Helicobacter pylori 26695
Helicobacter pylori 26695
action filter_type
action find
entity glutamate-1-semialdehyde aminotransferase    HP0306
relation found in taxon
type taxon
['glutamate-1-semialdehyde aminotransferase    HP0306', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?x WHERE { resource:glutamate-1-semialdehyde_aminotransferase____HP0306 property:found_in_taxon ?x . ?x rdf:type ontology:taxon }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21632816
P681
Q15989253
USER
Which part is a component of glutamate-1-semialdehyde aminotransferase    HP0306 ?
(Q21632816,P681,c(Q15989253))
action filter_type
action find
entity Q21632816
relation P681
type Q15989253
['Q21632816', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q21632816 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
glutamate-1-semialdehyde aminotransferase    HP0306
action filter_type
action find
entity glutamate-1-semialdehyde aminotransferase    HP0306
relation cell component
type part
['glutamate-1-semialdehyde aminotransferase    HP0306', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:glutamate-1-semialdehyde_aminotransferase____HP0306 property:cell_component ?s . ?s rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q21632816,P681,c(Q15989253))
action filter_type
action find
entity Q21632816
relation P681
type Q15989253
[ANSWER] is a component of glutamate-1-semialdehyde aminotransferase HP0306
['Q21632816', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q21632816 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
cytoplasm
Cytoplasm is a component of glutamate-1-semialdehyde aminotransferase HP0306
cytoplasm
action filter_type
action find
entity glutamate-1-semialdehyde aminotransferase    HP0306
relation cell component
type part
['glutamate-1-semialdehyde aminotransferase    HP0306', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:glutamate-1-semialdehyde_aminotransferase____HP0306 property:cell_component ?s . ?s rdf:type ontology:part }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21632816
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q79899)
action filter_type
action find_reverse
entity Q21632816
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q79899']
SELECT DISTINCT ?i WHERE { ?i property:P688 resource:Q21632816 . ?i rdf:type ontology:Q863908 }
glutamate-1-semialdehyde aminotransferase    HP0306
action filter_type
action find_reverse
entity glutamate-1-semialdehyde aminotransferase    HP0306
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'cytoplasm']
SELECT DISTINCT ?i WHERE { ?i property:encodes resource:glutamate-1-semialdehyde_aminotransferase____HP0306 . ?i rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q21629283
SYSTEM
glutamate-1-semialdehyde aminotransferase    HP0306
Q21629283
(c(Q863908),P688,Q79899)
action filter_type
action find_reverse
entity Q21632816
relation P688
type Q863908
Glutamate-1-semialdehyde aminotransferase HP0306 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q79899']
SELECT DISTINCT ?i WHERE { ?i property:P688 resource:Q21632816 . ?i rdf:type ontology:Q863908 }
glutamate-1-semialdehyde aminotransferase    HP0306
Glutamate-1-semialdehyde aminotransferase HP0306 encodes that nutrient
glutamate-1-semialdehyde aminotransferase    HP0306
action filter_type
action find_reverse
entity glutamate-1-semialdehyde aminotransferase    HP0306
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'cytoplasm']
SELECT DISTINCT ?i WHERE { ?i property:encodes resource:glutamate-1-semialdehyde_aminotransferase____HP0306 . ?i rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q15322565
P680
Q44424
USER
Which the chemical bond that represents the molecular function of Neuronal PAS domain-containing protein 2 ?
(Q15322565,P680,c(Q44424))
action filter_type
action find
entity Q15322565
relation P680
type Q44424
['Q15322565', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?h WHERE { resource:Q15322565 property:P680 ?h . ?h rdf:type ontology:Q44424 }
Neuronal PAS domain-containing protein 2
action filter_type
action find
entity Neuronal PAS domain-containing protein 2
relation molecular function
type chemical bond
['Neuronal PAS domain-containing protein 2', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?h WHERE { resource:Neuronal_PAS_domain-containing_protein_2 property:molecular_function ?h . ?h rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380
SYSTEM
metal ion binding
Q13667380
(Q15322565,P680,c(Q44424))
action filter_type
action find
entity Q15322565
relation P680
type Q44424
Represents of [ANSWER]
['Q15322565', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?h WHERE { resource:Q15322565 property:P680 ?h . ?h rdf:type ontology:Q44424 }
metal ion binding
Represents of metal ion binding
metal ion binding
action filter_type
action find
entity Neuronal PAS domain-containing protein 2
relation molecular function
type chemical bond
['Neuronal PAS domain-containing protein 2', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?h WHERE { resource:Neuronal_PAS_domain-containing_protein_2 property:molecular_function ?h . ?h rdf:type ontology:chemical_bond }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21759092
Q44424
USER
And how about nitrate reductase catalytic subunit    PA1174?
(Q21759092,P680,c(Q44424))
action filter_type
action find
entity Q21759092
relation P680
type Q44424
['Q21759092', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:Q44424 . resource:Q21759092 property:P680 ?y }
nitrate reductase catalytic subunit    PA1174
action filter_type
action find
entity nitrate reductase catalytic subunit    PA1174
relation molecular function
type chemical bond
['nitrate reductase catalytic subunit    PA1174', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:chemical_bond . resource:nitrate_reductase_catalytic_subunit____PA1174 property:molecular_function ?y }
[]
chemical bond
Q14916240 Q14358439
SYSTEM
molybdenum ion binding, iron ion binding
Q14916240 Q14358439
(Q21759092,P680,c(Q44424))
action filter_type
action find
entity Q21759092
relation P680
type Q44424
[ANSWERS]
['Q21759092', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:Q44424 . resource:Q21759092 property:P680 ?y }
molybdenum ion binding iron ion binding
molybdenum ion binding iron ion binding
action filter_type
action find
entity nitrate reductase catalytic subunit    PA1174
relation molecular function
type chemical bond
['nitrate reductase catalytic subunit    PA1174', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:chemical_bond . resource:nitrate_reductase_catalytic_subunit____PA1174 property:molecular_function ?y }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21759092
P702
Q863908
USER
Which gene encodes that nutrient ?
(Q14916240,P702,c(Q863908)) (Q14358439,P702,c(Q863908))
action filter_type
action find
entity Q21759092
relation P702
type Q863908
['Q14916240', 'P702', {'concept': 'Q863908'}] ['Q14358439', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?z WHERE { resource:Q21759092 property:P702 ?z . ?z rdf:type ontology:Q863908 }
nitrate reductase catalytic subunit    PA1174
action filter_type
action find
entity nitrate reductase catalytic subunit    PA1174
relation encoded by
type nucleic acid sequence
['molybdenum ion binding', 'encoded by', {'concept': 'nucleic acid sequence'}] ['iron ion binding', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?z WHERE { resource:nitrate_reductase_catalytic_subunit____PA1174 property:encoded_by ?z . ?z rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q21689956
SYSTEM
nitrate reductase catalytic subunit    PA1174
Q21689956
(Q14916240,P702,c(Q863908)) (Q14358439,P702,c(Q863908))
action filter_type
action find
entity Q21759092
relation P702
type Q863908
The nitrate reductase catalytic subunit PA1174 encodes that nutrient
['Q14916240', 'P702', {'concept': 'Q863908'}] ['Q14358439', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?z WHERE { resource:Q21759092 property:P702 ?z . ?z rdf:type ontology:Q863908 }
nitrate reductase catalytic subunit    PA1174
The nitrate reductase catalytic subunit PA1174 encodes that nutrient
nitrate reductase catalytic subunit    PA1174
action filter_type
action find
entity nitrate reductase catalytic subunit    PA1174
relation encoded by
type nucleic acid sequence
['molybdenum ion binding', 'encoded by', {'concept': 'nucleic acid sequence'}] ['iron ion binding', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?z WHERE { resource:nitrate_reductase_catalytic_subunit____PA1174 property:encoded_by ?z . ?z rdf:type ontology:nucleic_acid_sequence }
[]