Simple Question (Direct)
Simple Question
Q27547162
P703
Q631147
USER
Which infraspecific name is mitochondrial 37S ribosomal protein MRPS28 YDR337W found in ?
(Q27547162,P703,c(Q631147))
action filter_type
action find
entity Q27547162
relation P703
type Q631147
['Q27547162', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?h WHERE { resource:Q27547162 property:P703 ?h . ?h rdf:type ontology:Q631147 }
mitochondrial 37S ribosomal protein MRPS28 YDR337W
action filter_type
action find
entity mitochondrial 37S ribosomal protein MRPS28 YDR337W
relation found in taxon
type infraspecific name
['mitochondrial 37S ribosomal protein MRPS28 YDR337W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?h WHERE { resource:mitochondrial_37S_ribosomal_protein_MRPS28_YDR337W property:found_in_taxon ?h . ?h rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27547162,P703,c(Q631147))
action filter_type
action find
entity Q27547162
relation P703
type Q631147
[ANSWER] is mitochondrial 37S ribosomal protein MRPS28 YDR337W found in
['Q27547162', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?h WHERE { resource:Q27547162 property:P703 ?h . ?h rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c is mitochondrial 37S ribosomal protein MRPS28 YDR337W found in
Saccharomyces cerevisiae S288c
action filter_type
action find
entity mitochondrial 37S ribosomal protein MRPS28 YDR337W
relation found in taxon
type infraspecific name
['mitochondrial 37S ribosomal protein MRPS28 YDR337W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?h WHERE { resource:mitochondrial_37S_ribosomal_protein_MRPS28_YDR337W property:found_in_taxon ?h . ?h rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27547162
P688
Q863908
USER
Which nucleic acid sequence encodes mitochondrial 37S ribosomal protein MRPS28 YDR337W ?
(c(Q863908),P688,Q27547162)
action filter_type
action find_reverse
entity Q27547162
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27547162']
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:Q863908 . ?d property:P688 resource:Q27547162 }
mitochondrial 37S ribosomal protein MRPS28 YDR337W
action filter_type
action find_reverse
entity mitochondrial 37S ribosomal protein MRPS28 YDR337W
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'mitochondrial 37S ribosomal protein MRPS28 YDR337W']
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:nucleic_acid_sequence . ?d property:encodes resource:mitochondrial_37S_ribosomal_protein_MRPS28_YDR337W }
[]
nucleic acid sequence
Q27527099
SYSTEM
mitochondrial 37S ribosomal protein MRPS28 YDR337W
Q27527099
(c(Q863908),P688,Q27547162)
action filter_type
action find_reverse
entity Q27547162
relation P688
type Q863908
[ANSWER] encodes [ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q27547162']
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:Q863908 . ?d property:P688 resource:Q27547162 }
mitochondrial 37S ribosomal protein MRPS28 YDR337W
Mitochondrial 37S ribosomal protein MRPS28 YDR337W encodes mitochondrial 37S ribosomal protein MRPS28 YDR337W
mitochondrial 37S ribosomal protein MRPS28 YDR337W
action filter_type
action find_reverse
entity mitochondrial 37S ribosomal protein MRPS28 YDR337W
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'mitochondrial 37S ribosomal protein MRPS28 YDR337W']
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:nucleic_acid_sequence . ?d property:encodes resource:mitochondrial_37S_ribosomal_protein_MRPS28_YDR337W }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27547162
P702
Q863908
USER
What is the gene that encodes mitochondrial 37S ribosomal protein MRPS28 YDR337W ?
(Q27547162,P702,c(Q863908))
action filter_type
action find
entity Q27547162
relation P702
type Q863908
['Q27547162', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?f WHERE { resource:Q27547162 property:P702 ?f . ?f rdf:type ontology:Q863908 }
mitochondrial 37S ribosomal protein MRPS28 YDR337W
action filter_type
action find
entity mitochondrial 37S ribosomal protein MRPS28 YDR337W
relation encoded by
type nucleic acid sequence
['mitochondrial 37S ribosomal protein MRPS28 YDR337W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?f WHERE { resource:mitochondrial_37S_ribosomal_protein_MRPS28_YDR337W property:encoded_by ?f . ?f rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27527099
SYSTEM
mitochondrial 37S ribosomal protein MRPS28 YDR337W
Q27527099
(Q27547162,P702,c(Q863908))
action filter_type
action find
entity Q27547162
relation P702
type Q863908
The gene that encodes mitochondrial 37S ribosomal protein MRPS28 YDR337 W is codes [ANSWER]
['Q27547162', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?f WHERE { resource:Q27547162 property:P702 ?f . ?f rdf:type ontology:Q863908 }
mitochondrial 37S ribosomal protein MRPS28 YDR337W
The gene that encodes mitochondrial 37S ribosomal protein MRPS28 YDR337 W is codes mitochondrial 37S ribosomal protein MRPS28 YDR337W
mitochondrial 37S ribosomal protein MRPS28 YDR337W
action filter_type
action find
entity mitochondrial 37S ribosomal protein MRPS28 YDR337W
relation encoded by
type nucleic acid sequence
['mitochondrial 37S ribosomal protein MRPS28 YDR337W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?f WHERE { resource:mitochondrial_37S_ribosomal_protein_MRPS28_YDR337W property:encoded_by ?f . ?f rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q8386
USER
Which nutrients do around 6 nutrients and drugs interact with ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 6
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?a WHERE { FILTER ( ?p = 6 ) . { SELECT DISTINCT ?a ( COUNT ( ?q ) AS ?p ) WHERE { VALUES ( ?r ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?q rdf:type ?r } GROUP BY ?a } }
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 6
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?a WHERE { FILTER ( ?p = 6 ) . { SELECT DISTINCT ?a ( COUNT ( ?q ) AS ?p ) WHERE { VALUES ( ?r ) { ( ontology:drug ) ( ontology:nutrient ) } . ?q rdf:type ?r } GROUP BY ?a } }
[]
nutrient nutrient drug
Q21109354 Q424401 Q587961
SYSTEM
Proto-oncogene tyrosine-protein kinase Src, Epidermal growth factor receptor, Tyrosine-protein kinase ABL1
Q21115605 Q21110942 Q22679043 Q21115210 Q5018799 Q21116154 Q14872770 Q21173427 Q21119831 Q21982207 Q21109971 Q21127094 Q21104718 Q21119231 Q7671480 Q21115284 Q21987850 Q423701 Q413209 Q905729 Q420930 Q14908176 Q21497881 Q21173164 Q21119836 Q21118791 Q21120422 Q21111175 Q21120424 Q417057 Q21154358 Q6155969 Q21125451 Q21147674 Q1499998 Q409166 Q1947065 Q15335226 Q21118071 Q2463389 Q14864142 Q7553281 Q15323688 Q21108789 Q21108624 Q4216080 Q21156477 Q21156475 Q420470 Q4048886 Q423510 Q21137668 Q21100658 Q1552797 Q21135205 Q424440 Q21117208 Q21102756 Q21172390 Q3609382 Q21494481 Q1486720 Q4789588 Q21107843 Q4789584 Q21105011 Q21113671 Q4789587 Q4822789 Q401536 Q258915 Q21126218 Q21130085 Q21135448 Q21173374 Q1084878 Q21108402 Q21984557 Q14900999 Q415287 Q7861688 Q7671479 Q21118909 Q21136123 Q7169506 Q7169504 Q415607 Q21136517 Q21109365 Q21107439 Q15323278 Q21102152 Q21103155 Q2042529 Q21109974 Q21985924 Q2398308 Q5038044 Q21109218 Q14905270 Q5201199 Q905736 Q14911929 Q21122995 Q21135975 Q21172213 Q14914580 Q21102129 Q415976 Q21496563 Q15323770 Q5198252 Q21109744 Q21102124 Q21124458 Q21107885 Q21123236 Q21111742 Q21123239 Q21117805 Q21123244 Q21115204 Q21107890 Q410798 Q21107891 Q21103207 Q21110467 Q7671473 Q254943 Q21119828 Q15327635 Q21119820 Q21118920 Q6414726 Q21107812 Q4847907 Q22680153 Q21108482 Q7671495 Q7671497 Q21121815 Q21116513 Q7671493 Q21499436 Q21097491 Q21111162 Q21116946 Q21115906 Q21114332 Q21987842 Q21982210 Q6901317 Q21119851 Q416601 Q417149 Q21102588 Q5611730 Q5401858 Q5401857 Q21120458 Q21125466 Q412483 Q420766 Q5005897 Q1493174 Q11071131 Q21497887 Q21988386 Q22676679 Q21173381 Q5514257 Q3459294 Q21497941 Q21102511 Q21119672 Q21987844 Q21987843 Q21119575 Q21202200 Q21118732 Q21126779 Q21497890 Q21126777 Q21116162 Q21110396 Q21116164 Q419999 Q21135949 Q21096262 Q21135943 Q21135945 Q21991513 Q21117235 Q21108844 Q417801 Q21494387 Q21120420 Q5773155 Q21119704 Q21173310 Q5500222 Q7390898 Q21111803 Q21112690 Q21120423 Q22679015 Q15322943 Q21174687 Q21125248 Q21105060 Q21125240 Q21115334 Q14905969 Q21118353 Q21118356 Q21117300 Q7799753 Q21175110 Q21175111 Q21110921 Q21173406 Q288382 Q4036865 Q21119818 Q21983261 Q21111182 Q21111181 Q21102300 Q3931282 Q909409 Q5513985 Q21108338 Q21109298 Q21109354 Q21115954 Q409867 Q21117407 Q21103146 Q21110752 Q21114578 Q408305 Q3454525 Q21097237 Q21120955 Q21114576 Q21108785 Q14911895 Q3721138 Q21156191 Q21108487 Q21110901 Q14905748 Q21103337 Q3271551 Q21990456 Q21103323 Q21102136 Q21498865 Q21123247 Q21123242 Q128861 Q21132004 Q21114845 Q423572 Q12746111 Q422579 Q21499210 Q21112674 Q21100639 Q21119156 Q2819188 Q21119157 Q21991520 Q21126786 Q7117825 Q21115989 Q7117823 Q21118919 Q5198254 Q7136149 Q21125249 Q21122493 Q7671468 Q21100975 Q4897175 Q21102111 Q412214 Q1085078 Q21121368 Q21106693 Q7673856 Q21119848 Q21103198 Q21118862 Q5464652 Q21126833 Q356093 Q21119847 Q21110936 Q22677167 Q21132917 Q21132915 Q21979519 Q21135411 Q6592965 Q22676780 Q905000 Q21115961 Q21115962 Q21115965 Q14905076 Q21105176 Q21113504 Q14912057 Q21989670 Q418404 Q21497874 Q21127300 Q21498709 Q21102075 Q21119653 Q21111553 Q21108161 Q21124409 Q21140676 Q311568 Q1436420 Q21173485 Q5773160 Q21111833 Q6590443 Q21122997 Q21132789 Q21106691 Q3062781 Q21125253 Q6981557 Q12746120 Q11071075 Q6449561 Q21111336 Q5198250 Q7799751 Q14914198 Q21138907 Q21119843 Q315860 Q5629167 Q21119827 Q21115815 Q21115816 Q21115819 Q21172286 Q21122921 Q21121233 Q21110532 Q21159525 Q21108125 Q22678664 Q5446457 Q5446456 Q21106737 Q5446453 Q14914104 Q3271142 Q21992684 Q415271 Q21102593 Q7834290 Q21114585 Q21109026 Q1500004 Q21114582 Q21102123 Q565672 Q408572 Q21497939 Q3454531 Q21497937 Q21497936 Q21113832 Q1979313 Q21123416 Q21982979 Q21121086 Q21109462 Q21122433 Q21122435 Q3162114 Q21984578 Q21133205 Q21102082 Q21984577 Q904925 Q3415811 Q424401 Q5009781 Q21131101 Q5014958 Q21119822 Q21172800 Q21173206 Q21173207 Q2521094 Q5014957 Q415718 Q21123251 Q285613 Q904241 Q21114850 Q21982203 Q21174141 Q21130911 Q21113540 Q21150595 Q423561 Q21120051 Q587961 Q7119501 Q21115996 Q21118578 Q21115992 Q22676802 Q21109157 Q21118576 Q21115998 Q21201618 Q15324694 Q21096394 Q21988427 Q21991039 Q21201294 Q411791 Q14905763 Q21118884 Q21496564 Q7671477 Q21127141 Q21111265 Q21116665 Q15327766 Q21118970 Q21118976 Q416336 Q21110922 Q21498666 Q21109359 Q21173608 Q21136134 Q21129997 Q6592976 Q423628 Q21157551 Q21121276 Q7120338 Q21113510 Q21100810 Q424693 Q21123223 Q21102146 Q21103162 Q21121816 Q410434 Q6449560 Q6449562 Q21111520 Q7390572 Q6155967 Q21100360 Q21984383 Q21984381 Q21125499 Q21499447 Q15324415 Q15323565 Q5201201 Q2005209 Q5520260 Q21121496 Q21123220 Q21134814 Q21113683 Q6981560 Q21118710 Q418781
(c(Q181394)|c(Q8386),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 6
[ANSWERS] around 6 nutrients and drugs interact with
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?a WHERE { FILTER ( ?p = 6 ) . { SELECT DISTINCT ?a ( COUNT ( ?q ) AS ?p ) WHERE { VALUES ( ?r ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?q rdf:type ?r } GROUP BY ?a } }
Vascular endothelial growth factor receptor 1 G-protein coupled receptor 55 Aldose reductase ATP-binding cassette sub-family A member 1 Calcium-activated potassium channel subunit alpha-1 Adenosine receptor A3 Histamine H4 receptor Histone deacetylase 9 Potassium voltage-gated channel subfamily H member 5 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 Cation channel sperm-associated protein 4 Rho-associated protein kinase 2 Solute carrier family 22 member 3 Tyrosine-protein kinase TXK Transient receptor potential cation channel subfamily M member 4 Activated CDC42 kinase 1 Prostaglandin E2 receptor EP2 subtype Coagulation factor X Transient receptor potential cation channel subfamily V member 1 Prostaglandin D2 receptor Glutathione reductase, mitochondrial Transient receptor potential cation channel subfamily V member 1 G protein-activated inward rectifier potassium channel 4 Carbonic anhydrase 1 Small conductance calcium-activated potassium channel protein 1 Multidrug resistance-associated protein 5 Prostaglandin E2 receptor EP4 subtype Neuronal acetylcholine receptor subunit alpha-3 Prostaglandin E2 receptor EP2 subtype Vitamin D3 receptor Histone deacetylase 3 Tyrosine-protein kinase JAK3 Tryptophan 5-hydroxylase 1 Estrogen-related receptor gamma Voltage-dependent L-type calcium channel subunit alpha-1C Prothrombin Voltage-dependent N-type calcium channel subunit alpha-1B D(2) dopamine receptor Steroid hormone receptor ERR2 Tyrosine-protein kinase Lyn 3-hydroxy-3-methylglutaryl-coenzyme A reductase Solute carrier family 12 member 3 Transient receptor potential cation channel subfamily V member 2 Potassium voltage-gated channel subfamily KQT member 5 Platelet-derived growth factor receptor beta 72 kDa type IV collagenase Hydroxycarboxylic acid receptor 1 Hydroxycarboxylic acid receptor 3 Cystic fibrosis transmembrane conductance regulator 3-oxo-5-alpha-steroid 4-dehydrogenase 2 Amyloid beta A4 protein Fibroblast growth factor receptor 4 Rho-associated protein kinase 1 Heat-stable enterotoxin receptor Dihydroorotate dehydrogenase (quinone), mitochondrial Cytochrome P450 3A4 Chymotrypsin-like elastase family member 1 Testis-specific serine/threonine-protein kinase 1 Vascular endothelial growth factor receptor 2 Cytochrome P450 11B2, mitochondrial Uracil nucleotide/cysteinyl leukotriene receptor Glutamate receptor 3 Vasopressin V2 receptor Potassium voltage-gated channel subfamily A member 10 Vasopressin V1a receptor cGMP-dependent 3',5'-cyclic phosphodiesterase ATP-binding cassette sub-family C member 8 Vasopressin V1b receptor Toll-like receptor 7 Tyrosine-protein kinase Blk Renin Folate transporter 1 Mitogen-activated protein kinase kinase kinase kinase 5 Sodium channel protein type 2 subunit alpha Plasminogen Peroxisome proliferator-activated receptor gamma Chloride channel protein 2 Potassium voltage-gated channel subfamily D member 1 Kappa-type opioid receptor Aromatase Non-receptor tyrosine-protein kinase TYK2 Transient receptor potential cation channel subfamily M member 3 Ovarian cancer G-protein coupled receptor 1 Solute carrier organic anion transporter family member 2B1 Peroxisome proliferator-activated receptor alpha Peroxisome proliferator-activated receptor delta 3-hydroxy-3-methylglutaryl-coenzyme A reductase Zinc-activated ligand-gated ion channel 5-hydroxytryptamine receptor 4 Farnesyl pyrophosphate synthase Transient receptor potential cation channel subfamily A member 1 Voltage-dependent T-type calcium channel subunit alpha-1I Glycine receptor subunit alpha-1 Toll-like receptor 9 Cation channel sperm-associated protein 3 P2X purinoceptor 4 P2Y purinoceptor 12 Carbonic anhydrase 4 Serine/threonine-protein kinase B-raf Thyrotropin-releasing hormone receptor Cysteinyl leukotriene receptor 2 Prostacyclin receptor Mu-type opioid receptor Melatonin receptor type 1A Multidrug and toxin extrusion protein 1 Solute carrier family 22 member 1 Short transient receptor potential channel 6 Voltage-dependent T-type calcium channel subunit alpha-1H Proto-oncogene tyrosine-protein kinase receptor Ret Potassium voltage-gated channel subfamily C member 1 Transient receptor potential cation channel subfamily M member 4 Cyclin-dependent kinase 6 Dual specificity mitogen-activated protein kinase kinase 7 Voltage-dependent L-type calcium channel subunit alpha-1F Sodium-dependent neutral amino acid transporter B(0)AT2 Potassium voltage-gated channel subfamily B member 2 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform Complement C1r subcomponent Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' cAMP-specific 3',5'-cyclic phosphodiesterase 4A cGMP-inhibited 3',5'-cyclic phosphodiesterase B 5'-AMP-activated protein kinase subunit beta-1 Potassium voltage-gated channel subfamily A member 7 cGMP-specific 3',5'-cyclic phosphodiesterase Potassium voltage-gated channel subfamily D member 1 G-protein coupled bile acid receptor 1 Potassium-transporting ATPase alpha chain 1 Short transient receptor potential channel 7 Retinoic acid receptor alpha ATP-sensitive inward rectifier potassium channel 8 Transient receptor potential cation channel subfamily M member 7 Potassium channel subfamily K member 2 P2X purinoceptor 3 ATP-sensitive inward rectifier potassium channel 11 Inositol 1,4,5-trisphosphate receptor type 1 Muscarinic acetylcholine receptor M4 Ornithine decarboxylase DNA topoisomerase 2-alpha Transient receptor potential cation channel subfamily M member 8 Transient receptor potential cation channel subfamily V member 2 P2Y purinoceptor 11 Serine/threonine-protein kinase 4 Transient receptor potential cation channel subfamily M member 7 Muscarinic acetylcholine receptor M1 Sodium/potassium-transporting ATPase subunit alpha-1 Acetylcholine receptor subunit alpha Carbonic anhydrase 12 Poly [ADP-ribose] polymerase 2 Tubulin beta chain Prostaglandin E2 receptor EP3 subtype Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 Amine oxidase [flavin-containing] A Potassium channel subfamily K member 4 Androgen receptor Dihydrofolate reductase Sn1-specific diacylglycerol lipase beta Growth hormone-releasing hormone receptor Estrogen receptor Estrogen receptor beta Proteasome subunit beta type-5 Tryptophan 5-hydroxylase 2 Cholesterol side-chain cleavage enzyme, mitochondrial Tyrosine 3-monooxygenase Hepatocyte growth factor receptor Vitamin K-dependent gamma-carboxylase Glucagon-like peptide 2 receptor G protein-activated inward rectifier potassium channel 1 Delta-type opioid receptor Acetylcholinesterase Histone deacetylase 6 G-protein coupled estrogen receptor 1 Sodium channel protein type 5 subunit alpha 5-hydroxytryptamine receptor 4 Platelet-derived growth factor receptor alpha Phosphatidylinositol 4-kinase type 2-beta Prostaglandin E2 receptor EP1 subtype Prostaglandin E2 receptor EP4 subtype P2Y purinoceptor 1 cAMP-specific 3',5'-cyclic phosphodiesterase 4C Maltase-glucoamylase, intestinal P2Y purinoceptor 4 ATP-sensitive inward rectifier potassium channel 8 P2Y purinoceptor 2 Adenosine receptor A2a Peptidyl-prolyl cis-trans isomerase FKBP1A Adenosine receptor A2b Transthyretin Solute carrier family 22 member 11 Sodium leak channel non-selective protein Solute carrier family 22 member 8 Solute carrier family 22 member 12 Trace amine-associated receptor 4 Nuclear receptor ROR-beta P2X purinoceptor 4 Extracellular calcium-sensing receptor Steroid hormone receptor ERR1 Prostaglandin E2 receptor EP1 subtype Histone deacetylase 2 Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Endothelin B receptor Free fatty acid receptor 1 Sodium/glucose cotransporter 2 Voltage-dependent L-type calcium channel subunit alpha-1S fMet-Leu-Phe receptor Prostaglandin E2 receptor EP3 subtype Cholinesterase Short transient receptor potential channel 4 Sodium/bile acid cotransporter Solute carrier organic anion transporter family member 1B3 Aldo-keto reductase family 1 member C3 Solute carrier organic anion transporter family member 2A1 Delta-type opioid receptor Potassium voltage-gated channel subfamily A member 1 Vascular endothelial growth factor receptor 3 Calcium/calmodulin-dependent protein kinase type II subunit gamma Cytochrome P450 3A5 Thyroid hormone receptor beta Vitamin K epoxide reductase complex subunit 1 Solute carrier family 22 member 2 Uracil nucleotide/cysteinyl leukotriene receptor Histone deacetylase 8 Histamine H4 receptor Discoidin domain-containing receptor 2 Intermediate conductance calcium-activated potassium channel protein 4 Platelet-derived growth factor receptor beta Neuronal acetylcholine receptor subunit alpha-6 Neuronal acetylcholine receptor subunit alpha-2 C-C chemokine receptor type 4 Calcitonin receptor Mast/stem cell growth factor receptor Kit Gonadotropin-releasing hormone receptor Ribonucleoside-diphosphate reductase subunit M2 Protein kinase C epsilon type Proto-oncogene tyrosine-protein kinase Src Glycine receptor subunit alpha-2 Nuclear receptor subfamily 1 group I member 2 Serine/threonine-protein kinase 24 Glycine receptor subunit alpha-3 Cytochrome P450 2J2 Gamma-aminobutyric acid receptor subunit alpha-3 Steroid 17-alpha-hydroxylase/17,20 lyase Progesterone receptor Aromatic-L-amino-acid decarboxylase Nuclear receptor subfamily 2 group C member 2 Gamma-aminobutyric acid receptor subunit alpha-5 Potassium voltage-gated channel subfamily KQT member 4 Thymidylate synthase Neutrophil elastase Cyclin-dependent kinase 19 Parathyroid hormone/parathyroid hormone-related peptide receptor Gastrin/cholecystokinin type B receptor Voltage-dependent L-type calcium channel subunit alpha-1C Two pore calcium channel protein 1 Smoothened homolog Prostaglandin D2 receptor 2 Two pore calcium channel protein 2 Retinoic acid receptor RXR-beta Beta-3 adrenergic receptor cGMP-inhibited 3',5'-cyclic phosphodiesterase A cAMP-specific 3',5'-cyclic phosphodiesterase 4B Angiotensin-converting enzyme Endothelin-1 receptor Protein kinase C gamma type Tyrosine-protein kinase BTK Motilin receptor Insulin receptor Carbonic anhydrase 13 Poly [ADP-ribose] polymerase 1 Programmed cell death 1 ligand 1 Inosine-5'-monophosphate dehydrogenase 2 Type-1 angiotensin II receptor Inosine-5'-monophosphate dehydrogenase 1 Trace amine-associated receptor 1 P2X purinoceptor 7 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform P2X purinoceptor 1 Cyclin-dependent kinase 8 Parathyroid hormone 2 receptor Solute carrier organic anion transporter family member 1C1 Prostaglandin F2-alpha receptor Short transient receptor potential channel 5 Macrophage colony-stimulating factor 1 receptor Beta-3 adrenergic receptor Acid-sensing ion channel 3 Dipeptidyl peptidase 4 Bile acid receptor Sodium- and chloride-dependent GABA transporter 1 Cytoplasmic tyrosine-protein kinase BMX Substance-P receptor Potassium channel subfamily K member 9 G-protein coupled receptor family C group 6 member A Glutamate receptor ionotropic, NMDA 1 Follicle-stimulating hormone receptor Polycystic kidney disease 2-like 1 protein Adenosine deaminase Potassium channel subfamily K member 12 G-protein coupled receptor 35 Thyroid peroxidase Carbonic anhydrase 14 Carbonic anhydrase 7 Equilibrative nucleoside transporter 1 Multidrug and toxin extrusion protein 2 Retinoic acid receptor gamma Neuronal acetylcholine receptor subunit alpha-7 Potassium voltage-gated channel subfamily H member 2 Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Nuclear receptor subfamily 1 group I member 2 Anoctamin-1 Inward rectifier potassium channel 13 ATP-sensitive inward rectifier potassium channel 11 DNA topoisomerase 2-alpha C-C chemokine receptor type 5 Potassium channel subfamily U member 1 Serine/threonine-protein kinase 10 Adenosine receptor A2b Acid-sensing ion channel 1 Solute carrier family 12 member 2 Solute carrier family 22 member 6 Lysine-specific histone demethylase 1A Solute carrier family 12 member 1 Histone deacetylase 11 Histamine H2 receptor Xanthine dehydrogenase/oxidase Hydroxycarboxylic acid receptor 2 Histone deacetylase 5 Cation channel sperm-associated protein 2 Oxytocin receptor Melatonin receptor type 1B Chloride channel protein ClC-Kb Tyrosine-protein kinase FRK Adenosine receptor A1 Solute carrier organic anion transporter family member 1B1 Sodium channel protein type 4 subunit alpha Muscarinic acetylcholine receptor M5 Trace amine-associated receptor 1 Potassium voltage-gated channel subfamily KQT member 2 ALK tyrosine kinase receptor Cyclin-dependent kinase 4 Thyroid hormone receptor alpha Trifunctional purine biosynthetic protein adenosine-3 Ryanodine receptor 1 Small conductance calcium-activated potassium channel protein 2 Calcitonin Histone deacetylase 1 Potassium channel subfamily K member 10 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Brain-specific angiogenesis inhibitor 1 Chromaffin granule amine transporter Ribonucleoside-diphosphate reductase large subunit Potassium voltage-gated channel subfamily H member 1 Ryanodine receptor 3 5-hydroxytryptamine receptor 3A Ceramide glucosyltransferase Fibroblast growth factor receptor 3 Fibroblast growth factor receptor 2 Proteinase-activated receptor 1 Fibroblast growth factor receptor 1 Toll-like receptor 4 Cytochrome P450 2D6 Vascular endothelial growth factor receptor 3 Receptor tyrosine-protein kinase erbB-2 Sn1-specific diacylglycerol lipase alpha Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-6 Tryptase alpha/beta-1 Nuclear receptor subfamily 1 group I member 3 Gamma-aminobutyric acid receptor subunit alpha-2 Voltage-dependent T-type calcium channel subunit alpha-1G Lysosomal alpha-glucosidase Sigma non-opioid intracellular receptor 1 5-hydroxytryptamine receptor 7 Mineralocorticoid receptor 5-hydroxytryptamine receptor 5A 5-hydroxytryptamine receptor 3A Adhesion G protein-coupled receptor G3 Very low-density lipoprotein receptor Sodium/hydrogen exchanger 5 Alpha-1B adrenergic receptor Proton-coupled folate transporter Amine oxidase [flavin-containing] B Orexin receptor type 1 Orexin receptor type 2 Tyrosine-protein kinase JAK2 Potassium voltage-gated channel subfamily D member 2 Mas-related G-protein coupled receptor member X1 Acid-sensing ion channel 2 Potassium voltage-gated channel subfamily D member 3 Cytochrome P450 11B1, mitochondrial Ryanodine receptor 2 Epidermal growth factor receptor Receptor-type tyrosine-protein kinase FLT3 Membrane primary amine oxidase Cytochrome P450 2B6 Inward rectifier potassium channel 4 Free fatty acid receptor 4 Histone deacetylase 4 Histone deacetylase 7 Synaptic vesicular amine transporter Cytochrome P450 2C8 C-X-C chemokine receptor type 4 cAMP-specific 3',5'-cyclic phosphodiesterase 7B Serine/threonine-protein kinase mTOR Sodium/glucose cotransporter 1 Protein kinase C beta type Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Prostaglandin D2 receptor 2 Glutamate receptor ionotropic, NMDA 2D Calcium/calmodulin-dependent protein kinase type 1D Cannabinoid receptor 2 Lysosomal protective protein Retinoic acid receptor RXR-gamma Tyrosine-protein kinase ABL1 Protein kinase C alpha type Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 Potassium channel subfamily T member 2 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform Thymidylate synthase Serine/threonine-protein kinase PLK4 Potassium channel subfamily T member 1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Neuronal acetylcholine receptor subunit alpha-4 Transient receptor potential cation channel subfamily V member 3 Potassium voltage-gated channel subfamily A member 5 Prostacyclin receptor Multidrug and toxin extrusion protein 2 Cannabinoid receptor 1 Arachidonate 5-lipoxygenase Inward rectifier potassium channel 2 Niemann-Pick C1-like protein 1 Potassium voltage-gated channel subfamily A member 7 Transient receptor potential cation channel subfamily M member 2 Sodium-coupled monocarboxylate transporter 1 Cation channel sperm-associated protein 1 Dual specificity mitogen-activated protein kinase kinase 2 Transient receptor potential cation channel subfamily V member 5 G-protein coupled receptor 143 Probable G-protein coupled receptor 139 Antithrombin-III N-arachidonyl glycine receptor 5-hydroxytryptamine receptor 1B 5-hydroxytryptamine receptor 5A Peptidyl-prolyl cis-trans isomerase A Solute carrier organic anion transporter family member 3A1 Atypical chemokine receptor 3 Retinoic acid receptor beta Tyrosine-protein kinase Fyn Histone deacetylase 10 Proton-coupled amino acid transporter 1 Protein kinase C delta type ATP-sensitive inward rectifier potassium channel 10 Chloride channel protein ClC-Ka Pancreatic triacylglycerol lipase High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B Voltage-dependent L-type calcium channel subunit alpha-1D Glycine receptor subunit beta P2Y purinoceptor 13 RAF proto-oncogene serine/threonine-protein kinase Potassium voltage-gated channel subfamily KQT member 1 Potassium voltage-gated channel subfamily KQT member 3 Chloride channel protein 1 Small conductance calcium-activated potassium channel protein 3 Tyrosine-protein kinase JAK1 Dual specificity mitogen-activated protein kinase kinase 1 Voltage-dependent L-type calcium channel subunit alpha-1F Voltage-dependent L-type calcium channel subunit alpha-1D Trypsin-1 Muscarinic acetylcholine receptor M2 Transient receptor potential cation channel subfamily M member 8 Transient receptor potential cation channel subfamily M member 5 Cysteinyl leukotriene receptor 1 Insulin-like growth factor 1 receptor Gamma-aminobutyric acid receptor subunit alpha-1 Phosphatidylinositol 4-kinase type 2-alpha High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A Equilibrative nucleoside transporter 4 ATP-binding cassette sub-family G member 2 Sodium channel protein type 9 subunit alpha Retinoic acid receptor RXR-alpha Catechol O-methyltransferase
Proto-oncogene tyrosine-protein kinase Src, Epidermal growth factor receptor and Tyrosine-protein kinase ABL1 around 6 nutrients and drugs interact with
Proto-oncogene tyrosine-protein kinase Src Epidermal growth factor receptor Tyrosine-protein kinase ABL1
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 6
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?a WHERE { FILTER ( ?p = 6 ) . { SELECT DISTINCT ?a ( COUNT ( ?q ) AS ?p ) WHERE { VALUES ( ?r ) { ( ontology:drug ) ( ontology:nutrient ) } . ?q rdf:type ?r } GROUP BY ?a } }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q21109354 Q424401 Q587961
P688
Q863908
USER
Which nucleic acid sequences encodes those nutrients ?
(c(Q863908),P688,Q21109354) (c(Q863908),P688,Q424401) (c(Q863908),P688,Q587961)
action filter_type
action find_reverse
entity prev_answer
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21109354'] [{'concept': 'Q863908'}, 'P688', 'Q424401'] [{'concept': 'Q863908'}, 'P688', 'Q587961']
SELECT DISTINCT ?v WHERE { VALUES ( ?h ) { ( resource:Q21115605 ) ( resource:Q21110942 ) ( resource:Q22679043 ) } . ?v rdf:type ontology:Q863908 . ?v property:P688 ?h }
Proto-oncogene tyrosine-protein kinase Src Epidermal growth factor receptor Tyrosine-protein kinase ABL1
action filter_type
action find_reverse
entity prev_answer
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Proto-oncogene tyrosine-protein kinase Src'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Epidermal growth factor receptor'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Tyrosine-protein kinase ABL1']
SELECT DISTINCT ?v WHERE { VALUES ( ?h ) { ( resource:Vascular_endothelial_growth_factor_receptor_1 ) ( resource:G-protein_coupled_receptor_55 ) ( resource:Aldose_reductase ) } . ?v rdf:type ontology:nucleic_acid_sequence . ?v property:encodes ?h }
[]
nucleic acid sequence
Q424737 Q14865565 Q14873998
SYSTEM
SRC, EGFR, ABL1
Q424737 Q14865565 Q14873998
(c(Q863908),P688,Q21109354) (c(Q863908),P688,Q424401) (c(Q863908),P688,Q587961)
action filter_type
action find_reverse
entity prev_answer
relation P688
type Q863908
[ANSWERS] encode those nutrients
[{'concept': 'Q863908'}, 'P688', 'Q21109354'] [{'concept': 'Q863908'}, 'P688', 'Q424401'] [{'concept': 'Q863908'}, 'P688', 'Q587961']
SELECT DISTINCT ?v WHERE { VALUES ( ?h ) { ( resource:Q21115605 ) ( resource:Q21110942 ) ( resource:Q22679043 ) } . ?v rdf:type ontology:Q863908 . ?v property:P688 ?h }
SRC EGFR ABL1
SRC, EGFR and ABL1 encode those nutrients
SRC EGFR ABL1
action filter_type
action find_reverse
entity prev_answer
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Proto-oncogene tyrosine-protein kinase Src'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Epidermal growth factor receptor'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Tyrosine-protein kinase ABL1']
SELECT DISTINCT ?v WHERE { VALUES ( ?h ) { ( resource:Vascular_endothelial_growth_factor_receptor_1 ) ( resource:G-protein_coupled_receptor_55 ) ( resource:Aldose_reductase ) } . ?v rdf:type ontology:nucleic_acid_sequence . ?v property:encodes ?h }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q424737 Q14865565 Q14873998
P684
Q863908
USER
What are an otrhologus genes for SRC, EGFR and ABL1 ?
(Q424737,P684,c(Q863908)) (Q14865565,P684,c(Q863908)) (Q14873998,P684,c(Q863908))
action union
action filter_type
action find
entity Q424737
relation P684
type Q863908
action filter_type
action find
entity Q14865565
relation P684
type Q863908
action filter_type
action find
entity Q14873998
relation P684
type Q863908
['Q424737', 'P684', {'concept': 'Q863908'}] ['Q14865565', 'P684', {'concept': 'Q863908'}] ['Q14873998', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?o property:P684 ?g . VALUES ( ?o ) { ( resource:Q424737 ) ( resource:Q14865565 ) } }
SRC EGFR ABL1
action union
action filter_type
action find
entity SRC
relation ortholog
type nucleic acid sequence
action filter_type
action find
entity EGFR
relation ortholog
type nucleic acid sequence
action filter_type
action find
entity ABL1
relation ortholog
type nucleic acid sequence
['SRC', 'ortholog', {'concept': 'nucleic acid sequence'}] ['EGFR', 'ortholog', {'concept': 'nucleic acid sequence'}] ['ABL1', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?o property:ortholog ?g . VALUES ( ?o ) { ( resource:SRC ) ( resource:EGFR ) } }
[]
nucleic acid sequence
Q18254330 Q18250328 Q14873999
SYSTEM
Src, Egfr, Abl1
Q18254330 Q18250328 Q14873999
(Q424737,P684,c(Q863908)) (Q14865565,P684,c(Q863908)) (Q14873998,P684,c(Q863908))
action union
action filter_type
action find
entity Q424737
relation P684
type Q863908
action filter_type
action find
entity Q14865565
relation P684
type Q863908
action filter_type
action find
entity Q14873998
relation P684
type Q863908
An otrhologus genes for SRC , EGFR and ABL1 are named [ANSWERS]
['Q424737', 'P684', {'concept': 'Q863908'}] ['Q14865565', 'P684', {'concept': 'Q863908'}] ['Q14873998', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?o property:P684 ?g . VALUES ( ?o ) { ( resource:Q424737 ) ( resource:Q14865565 ) } }
Src Egfr Abl1
An otrhologus genes for SRC , EGFR and ABL1 are named Src, Egfr and Abl1
Src Egfr Abl1
action union
action filter_type
action find
entity SRC
relation ortholog
type nucleic acid sequence
action filter_type
action find
entity EGFR
relation ortholog
type nucleic acid sequence
action filter_type
action find
entity ABL1
relation ortholog
type nucleic acid sequence
['SRC', 'ortholog', {'concept': 'nucleic acid sequence'}] ['EGFR', 'ortholog', {'concept': 'nucleic acid sequence'}] ['ABL1', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?o property:ortholog ?g . VALUES ( ?o ) { ( resource:SRC ) ( resource:EGFR ) } }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q18254330 Q18250328 Q14873999
P688
Q181394
USER
What are encoded by those nucleic acid sequences ?
(Q18254330,P688,c(Q181394)) (Q18250328,P688,c(Q181394)) (Q14873999,P688,c(Q181394))
action filter_type
action find
entity prev_answer
relation P688
type Q181394
['Q18254330', 'P688', {'concept': 'Q181394'}] ['Q18250328', 'P688', {'concept': 'Q181394'}] ['Q14873999', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:Q181394 . VALUES ( ?u ) { ( resource:Q18254330 ) ( resource:Q18250328 ) ( resource:Q14873999 ) } . ?u property:P688 ?s }
Src Egfr Abl1
action filter_type
action find
entity prev_answer
relation encodes
type nutrient
['Src', 'encodes', {'concept': 'nutrient'}] ['Egfr', 'encodes', {'concept': 'nutrient'}] ['Abl1', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:nutrient . VALUES ( ?u ) { ( resource:Src ) ( resource:Egfr ) ( resource:Abl1 ) } . ?u property:encodes ?s }
[]
nutrient
Q21984733 Q21981692 Q14874000
SYSTEM
Neuronal proto-oncogene tyrosine-protein kinase Src, Epidermal growth factor receptor, Tyrosine-protein kinase ABL1
Q21984733 Q21981692 Q14874000
(Q18254330,P688,c(Q181394)) (Q18250328,P688,c(Q181394)) (Q14873999,P688,c(Q181394))
action filter_type
action find
entity prev_answer
relation P688
type Q181394
[ANSWERS] are encoded by those nucleic acid sequences
['Q18254330', 'P688', {'concept': 'Q181394'}] ['Q18250328', 'P688', {'concept': 'Q181394'}] ['Q14873999', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:Q181394 . VALUES ( ?u ) { ( resource:Q18254330 ) ( resource:Q18250328 ) ( resource:Q14873999 ) } . ?u property:P688 ?s }
Neuronal proto-oncogene tyrosine-protein kinase Src Epidermal growth factor receptor Tyrosine-protein kinase ABL1
Neuronal proto-oncogene tyrosine-protein kinase Src, Epidermal growth factor receptor and Tyrosine-protein kinase ABL1 are encoded by those nucleic acid sequences
Neuronal proto-oncogene tyrosine-protein kinase Src Epidermal growth factor receptor Tyrosine-protein kinase ABL1
action filter_type
action find
entity prev_answer
relation encodes
type nutrient
['Src', 'encodes', {'concept': 'nutrient'}] ['Egfr', 'encodes', {'concept': 'nutrient'}] ['Abl1', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:nutrient . VALUES ( ?u ) { ( resource:Src ) ( resource:Egfr ) ( resource:Abl1 ) } . ?u property:encodes ?s }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q21984733 Q21981692 Q14874000
P702
Q863908
USER
What are the gene that encodes Neuronal proto-oncogene tyrosine-protein kinase Src, Epidermal growth factor receptor and Tyrosine-protein kinase ABL1 ?
(Q21984733,P702,c(Q863908)) (Q21981692,P702,c(Q863908)) (Q14874000,P702,c(Q863908))
action union
action filter_type
action find
entity Q21984733
relation P702
type Q863908
action filter_type
action find
entity Q21981692
relation P702
type Q863908
action filter_type
action find
entity Q14874000
relation P702
type Q863908
['Q21984733', 'P702', {'concept': 'Q863908'}] ['Q21981692', 'P702', {'concept': 'Q863908'}] ['Q14874000', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { VALUES ( ?i ) { ( resource:Q21984733 ) ( resource:Q21981692 ) } . ?i property:P702 ?w }
Neuronal proto-oncogene tyrosine-protein kinase Src Epidermal growth factor receptor Tyrosine-protein kinase ABL1
action union
action filter_type
action find
entity Neuronal proto-oncogene tyrosine-protein kinase Src
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity Epidermal growth factor receptor
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity Tyrosine-protein kinase ABL1
relation encoded by
type nucleic acid sequence
['Neuronal proto-oncogene tyrosine-protein kinase Src', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Epidermal growth factor receptor', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Tyrosine-protein kinase ABL1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { VALUES ( ?i ) { ( resource:Neuronal_proto-oncogene_tyrosine-protein_kinase_Src ) ( resource:Epidermal_growth_factor_receptor ) } . ?i property:encoded_by ?w }
[]
nucleic acid sequence
Q18254330 Q18250328 Q14873999
SYSTEM
Src, Egfr, Abl1
Q18254330 Q18250328 Q14873999
(Q21984733,P702,c(Q863908)) (Q21981692,P702,c(Q863908)) (Q14874000,P702,c(Q863908))
action union
action filter_type
action find
entity Q21984733
relation P702
type Q863908
action filter_type
action find
entity Q21981692
relation P702
type Q863908
action filter_type
action find
entity Q14874000
relation P702
type Q863908
The gene that encodes Neuronal proto -oncogene tyrosine-protein kinase Src , Epidermal growth factor receptor and Tyrosine-protein kinase ABL1 are genes [ANSWERS]
['Q21984733', 'P702', {'concept': 'Q863908'}] ['Q21981692', 'P702', {'concept': 'Q863908'}] ['Q14874000', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { VALUES ( ?i ) { ( resource:Q21984733 ) ( resource:Q21981692 ) } . ?i property:P702 ?w }
Src Egfr Abl1
The gene that encodes Neuronal proto -oncogene tyrosine-protein kinase Src , Epidermal growth factor receptor and Tyrosine-protein kinase ABL1 are genes Src, Egfr and Abl1
Src Egfr Abl1
action union
action filter_type
action find
entity Neuronal proto-oncogene tyrosine-protein kinase Src
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity Epidermal growth factor receptor
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity Tyrosine-protein kinase ABL1
relation encoded by
type nucleic acid sequence
['Neuronal proto-oncogene tyrosine-protein kinase Src', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Epidermal growth factor receptor', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Tyrosine-protein kinase ABL1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { VALUES ( ?i ) { ( resource:Neuronal_proto-oncogene_tyrosine-protein_kinase_Src ) ( resource:Epidermal_growth_factor_receptor ) } . ?i property:encoded_by ?w }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q18254330 Q18250328 Q14873999
P702
Q181394
USER
Which nutrients do those nucleic acid sequences encode ?
(c(Q181394),P702,Q18254330) (c(Q181394),P702,Q18250328) (c(Q181394),P702,Q14873999)
action filter_type
action find_reverse
entity prev_answer
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q18254330'] [{'concept': 'Q181394'}, 'P702', 'Q18250328'] [{'concept': 'Q181394'}, 'P702', 'Q14873999']
SELECT DISTINCT ?i WHERE { ?i property:P702 ?r . ?i rdf:type ontology:Q181394 . VALUES ( ?r ) { ( resource:Q18254330 ) ( resource:Q18250328 ) ( resource:Q14873999 ) } }
Src Egfr Abl1
action filter_type
action find_reverse
entity prev_answer
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Src'] [{'concept': 'nutrient'}, 'encoded by', 'Egfr'] [{'concept': 'nutrient'}, 'encoded by', 'Abl1']
SELECT DISTINCT ?i WHERE { ?i property:encoded_by ?r . ?i rdf:type ontology:nutrient . VALUES ( ?r ) { ( resource:Src ) ( resource:Egfr ) ( resource:Abl1 ) } }
[]
nutrient
Q21984733 Q21981692 Q14874000
SYSTEM
Neuronal proto-oncogene tyrosine-protein kinase Src, Epidermal growth factor receptor, Tyrosine-protein kinase ABL1
Q21984733 Q21981692 Q14874000
(c(Q181394),P702,Q18254330) (c(Q181394),P702,Q18250328) (c(Q181394),P702,Q14873999)
action filter_type
action find_reverse
entity prev_answer
relation P702
type Q181394
Those nucleic acid sequences encode the [ANSWERS]
[{'concept': 'Q181394'}, 'P702', 'Q18254330'] [{'concept': 'Q181394'}, 'P702', 'Q18250328'] [{'concept': 'Q181394'}, 'P702', 'Q14873999']
SELECT DISTINCT ?i WHERE { ?i property:P702 ?r . ?i rdf:type ontology:Q181394 . VALUES ( ?r ) { ( resource:Q18254330 ) ( resource:Q18250328 ) ( resource:Q14873999 ) } }
Neuronal proto-oncogene tyrosine-protein kinase Src Epidermal growth factor receptor Tyrosine-protein kinase ABL1
Those nucleic acid sequences encode the Neuronal proto-oncogene tyrosine-protein kinase Src, Epidermal growth factor receptor and Tyrosine-protein kinase ABL1
Neuronal proto-oncogene tyrosine-protein kinase Src Epidermal growth factor receptor Tyrosine-protein kinase ABL1
action filter_type
action find_reverse
entity prev_answer
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Src'] [{'concept': 'nutrient'}, 'encoded by', 'Egfr'] [{'concept': 'nutrient'}, 'encoded by', 'Abl1']
SELECT DISTINCT ?i WHERE { ?i property:encoded_by ?r . ?i rdf:type ontology:nutrient . VALUES ( ?r ) { ( resource:Src ) ( resource:Egfr ) ( resource:Abl1 ) } }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q21984733 Q21981692 Q14874000
P688
Q863908
USER
Which nucleic acid sequences encodes those nutrients ?
(c(Q863908),P688,Q21984733) (c(Q863908),P688,Q21981692) (c(Q863908),P688,Q14874000)
action filter_type
action find_reverse
entity prev_answer
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21984733'] [{'concept': 'Q863908'}, 'P688', 'Q21981692'] [{'concept': 'Q863908'}, 'P688', 'Q14874000']
SELECT DISTINCT ?r WHERE { ?r property:P688 ?v . ?r rdf:type ontology:Q863908 . VALUES ( ?v ) { ( resource:Q21984733 ) ( resource:Q21981692 ) ( resource:Q14874000 ) } }
Neuronal proto-oncogene tyrosine-protein kinase Src Epidermal growth factor receptor Tyrosine-protein kinase ABL1
action filter_type
action find_reverse
entity prev_answer
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Neuronal proto-oncogene tyrosine-protein kinase Src'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Epidermal growth factor receptor'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Tyrosine-protein kinase ABL1']
SELECT DISTINCT ?r WHERE { ?r property:encodes ?v . ?r rdf:type ontology:nucleic_acid_sequence . VALUES ( ?v ) { ( resource:Neuronal_proto-oncogene_tyrosine-protein_kinase_Src ) ( resource:Epidermal_growth_factor_receptor ) ( resource:Tyrosine-protein_kinase_ABL1 ) } }
[]
nucleic acid sequence
Q18254330 Q18250328 Q14873999
SYSTEM
Src, Egfr, Abl1
Q18254330 Q18250328 Q14873999
(c(Q863908),P688,Q21984733) (c(Q863908),P688,Q21981692) (c(Q863908),P688,Q14874000)
action filter_type
action find_reverse
entity prev_answer
relation P688
type Q863908
[ANSWERS] encode those nutrients
[{'concept': 'Q863908'}, 'P688', 'Q21984733'] [{'concept': 'Q863908'}, 'P688', 'Q21981692'] [{'concept': 'Q863908'}, 'P688', 'Q14874000']
SELECT DISTINCT ?r WHERE { ?r property:P688 ?v . ?r rdf:type ontology:Q863908 . VALUES ( ?v ) { ( resource:Q21984733 ) ( resource:Q21981692 ) ( resource:Q14874000 ) } }
Src Egfr Abl1
Src, Egfr and Abl1 encode those nutrients
Src Egfr Abl1
action filter_type
action find_reverse
entity prev_answer
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Neuronal proto-oncogene tyrosine-protein kinase Src'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Epidermal growth factor receptor'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Tyrosine-protein kinase ABL1']
SELECT DISTINCT ?r WHERE { ?r property:encodes ?v . ?r rdf:type ontology:nucleic_acid_sequence . VALUES ( ?v ) { ( resource:Neuronal_proto-oncogene_tyrosine-protein_kinase_Src ) ( resource:Epidermal_growth_factor_receptor ) ( resource:Tyrosine-protein_kinase_ABL1 ) } }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q4847900 Q587961
P129
Q8386
USER
Which drugs do Tyrosine-protein kinase ABL1 or Muscarinic acetylcholine receptor M1 contact with ?
OR((Q587961,P129,c(Q8386)), (Q4847900,P129,c(Q8386)))
action filter_type
action union
action find
entity Q587961
relation P129
action find
entity Q4847900
relation P129
type Q8386
{'OR': [['Q587961', 'P129', {'concept': 'Q8386'}], ['Q4847900', 'P129', {'concept': 'Q8386'}]]}
SELECT DISTINCT ?p WHERE { { { resource:Q587961 property:P129 ?p } UNION { resource:Q4847900 property:P129 ?p } } . ?p rdf:type ontology:Q8386 }
Muscarinic acetylcholine receptor M1 Tyrosine-protein kinase ABL1
action filter_type
action union
action find
entity Tyrosine-protein kinase ABL1
relation physically interacts with
action find
entity Muscarinic acetylcholine receptor M1
relation physically interacts with
type drug
{'OR': [['Tyrosine-protein kinase ABL1', 'physically interacts with', {'concept': 'drug'}], ['Muscarinic acetylcholine receptor M1', 'physically interacts with', {'concept': 'drug'}]]}
SELECT DISTINCT ?p WHERE { { { resource:Tyrosine-protein_kinase_ABL1 property:physically_interacts_with ?p } UNION { resource:Muscarinic_acetylcholine_receptor_M1 property:physically_interacts_with ?p } } . ?p rdf:type ontology:drug }
[]
drug
Q419550 Q424312 Q411461 Q894611 Q521173 Q2662662 Q414914 Q2991856 Q419940 Q166476
SYSTEM
Some of them are pirenzepine, tolterodine, pilocarpine, bosutinib, aclidinium, dicyclomine, biperiden, trihexyphenidyl, dasatinib, darifenacin
Q411917 Q412327 Q419940 Q414914 Q521173 Q2662662 Q21011235 Q221361 Q424312 Q419550 Q894611 Q177094 Q411461 Q419059 Q58397 Q3275451 Q166476 Q2991856
OR((Q587961,P129,c(Q8386)), (Q4847900,P129,c(Q8386)))
action filter_type
action union
action find
entity Q587961
relation P129
action find
entity Q4847900
relation P129
type Q8386
[ANSWERS] Tyrosine-protein kinase ABL1 or Muscarinic acetylcholine receptor M1 contact with
{'OR': [['Q587961', 'P129', {'concept': 'Q8386'}], ['Q4847900', 'P129', {'concept': 'Q8386'}]]}
SELECT DISTINCT ?p WHERE { { { resource:Q587961 property:P129 ?p } UNION { resource:Q4847900 property:P129 ?p } } . ?p rdf:type ontology:Q8386 }
glycopyrrolate nilotinib dasatinib biperiden aclidinium dicyclomine umeclidinium clozapine tolterodine pirenzepine bosutinib imatinib pilocarpine bethanechol amitriptyline propantheline darifenacin trihexyphenidyl
Pirenzepine, tolterodine, pilocarpine, bosutinib, aclidinium, dicyclomine, biperiden, trihexyphenidyl, dasatinib and darifenacin Tyrosine-protein kinase ABL1 or Muscarinic acetylcholine receptor M1 contact with
pirenzepine tolterodine pilocarpine bosutinib aclidinium dicyclomine biperiden trihexyphenidyl dasatinib darifenacin
action filter_type
action union
action find
entity Tyrosine-protein kinase ABL1
relation physically interacts with
action find
entity Muscarinic acetylcholine receptor M1
relation physically interacts with
type drug
{'OR': [['Tyrosine-protein kinase ABL1', 'physically interacts with', {'concept': 'drug'}], ['Muscarinic acetylcholine receptor M1', 'physically interacts with', {'concept': 'drug'}]]}
SELECT DISTINCT ?p WHERE { { { resource:Tyrosine-protein_kinase_ABL1 property:physically_interacts_with ?p } UNION { resource:Muscarinic_acetylcholine_receptor_M1 property:physically_interacts_with ?p } } . ?p rdf:type ontology:drug }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23236730 Q14873998
P688
Q181394
USER
Which nutrients are encoded by ABL1 or preprotein translocase subunit SecY    lmo2612 ?
OR((Q14873998,P688,c(Q181394)), (Q23236730,P688,c(Q181394)))
action filter_type
action union
action find
entity Q14873998
relation P688
action find
entity Q23236730
relation P688
type Q181394
{'OR': [['Q14873998', 'P688', {'concept': 'Q181394'}], ['Q23236730', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q23236730 property:P688 ?q } UNION { resource:Q14873998 property:P688 ?q } } . ?q rdf:type ontology:Q181394 }
preprotein translocase subunit SecY    lmo2612 ABL1
action filter_type
action union
action find
entity ABL1
relation encodes
action find
entity preprotein translocase subunit SecY    lmo2612
relation encodes
type nutrient
{'OR': [['ABL1', 'encodes', {'concept': 'nutrient'}], ['preprotein translocase subunit SecY    lmo2612', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?q WHERE { { { resource:preprotein_translocase_subunit_SecY____lmo2612 property:encodes ?q } UNION { resource:ABL1 property:encodes ?q } } . ?q rdf:type ontology:nutrient }
[]
nutrient
Q24252864 Q587961
SYSTEM
preprotein translocase subunit SecY    lmo2612, Tyrosine-protein kinase ABL1
Q24252864 Q587961
OR((Q14873998,P688,c(Q181394)), (Q23236730,P688,c(Q181394)))
action filter_type
action union
action find
entity Q14873998
relation P688
action find
entity Q23236730
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q14873998', 'P688', {'concept': 'Q181394'}], ['Q23236730', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q23236730 property:P688 ?q } UNION { resource:Q14873998 property:P688 ?q } } . ?q rdf:type ontology:Q181394 }
preprotein translocase subunit SecY    lmo2612 Tyrosine-protein kinase ABL1
Preprotein translocase subunit SecY lmo2612 and Tyrosine-protein kinase ABL1 are encoded by ABL1 or preprotein translocase subunit SecY lmo2612
preprotein translocase subunit SecY    lmo2612 Tyrosine-protein kinase ABL1
action filter_type
action union
action find
entity ABL1
relation encodes
action find
entity preprotein translocase subunit SecY    lmo2612
relation encodes
type nutrient
{'OR': [['ABL1', 'encodes', {'concept': 'nutrient'}], ['preprotein translocase subunit SecY    lmo2612', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?q WHERE { { { resource:preprotein_translocase_subunit_SecY____lmo2612 property:encodes ?q } UNION { resource:ABL1 property:encodes ?q } } . ?q rdf:type ontology:nutrient }
[]