Simple Question (Direct)
Simple Question
Q21990515
P703
Q16521
USER
Where is RNA-binding motif, single-stranded-interacting protein 3 found ?
(Q21990515,P703,c(Q16521))
action filter_type
action find
entity Q21990515
relation P703
type Q16521
['Q21990515', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?j WHERE { resource:Q21990515 property:P703 ?j . ?j rdf:type ontology:Q16521 }
RNA-binding motif, single-stranded-interacting protein 3
action filter_type
action find
entity RNA-binding motif, single-stranded-interacting protein 3
relation found in taxon
type taxon
['RNA-binding motif, single-stranded-interacting protein 3', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?j WHERE { resource:RNA-binding_motif,_single-stranded-interacting_protein_3 property:found_in_taxon ?j . ?j rdf:type ontology:taxon }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
(Q21990515,P703,c(Q16521))
action filter_type
action find
entity Q21990515
relation P703
type Q16521
RNA-binding motif , single-stranded-interacting protein 3 is found in [ANSWER]
['Q21990515', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?j WHERE { resource:Q21990515 property:P703 ?j . ?j rdf:type ontology:Q16521 }
Mus musculus
RNA-binding motif , single-stranded-interacting protein 3 is found in Mus musculus
Mus musculus
action filter_type
action find
entity RNA-binding motif, single-stranded-interacting protein 3
relation found in taxon
type taxon
['RNA-binding motif, single-stranded-interacting protein 3', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?j WHERE { resource:RNA-binding_motif,_single-stranded-interacting_protein_3 property:found_in_taxon ?j . ?j rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21990515
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q83310)
action filter_type
action find_reverse
entity Q21990515
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q83310']
SELECT DISTINCT ?c WHERE { ?c property:P688 resource:Q21990515 . ?c rdf:type ontology:Q863908 }
RNA-binding motif, single-stranded-interacting protein 3
action filter_type
action find_reverse
entity RNA-binding motif, single-stranded-interacting protein 3
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Mus musculus']
SELECT DISTINCT ?c WHERE { ?c property:encodes resource:RNA-binding_motif,_single-stranded-interacting_protein_3 . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18295978
SYSTEM
Rbms3
Q18295978
(c(Q863908),P688,Q83310)
action filter_type
action find_reverse
entity Q21990515
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q83310']
SELECT DISTINCT ?c WHERE { ?c property:P688 resource:Q21990515 . ?c rdf:type ontology:Q863908 }
Rbms3
Rbms3 encodes that nutrient
Rbms3
action filter_type
action find_reverse
entity RNA-binding motif, single-stranded-interacting protein 3
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Mus musculus']
SELECT DISTINCT ?c WHERE { ?c property:encodes resource:RNA-binding_motif,_single-stranded-interacting_protein_3 . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Indirect
P684
Q863908
USER
How many nucleic acid sequences are an orthologous gene for that nucleic acid sequence ?
(Q18295978,P684,c(Q863908))
action count
action filter_type
action find
entity Q18295978
relation P684
type Q863908
['Q18295978', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?t ) WHERE { ?j rdf:type ontology:Q863908 . resource:Q18295978 property:P684 ?j }
action count
action filter_type
action find
entity Rbms3
relation ortholog
type nucleic acid sequence
['Rbms3', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?t ) WHERE { ?j rdf:type ontology:nucleic_acid_sequence . resource:Rbms3 property:ortholog ?j }
[]
nucleic acid sequence
SYSTEM
1
Q18038771
(Q18295978,P684,c(Q863908))
action count
action filter_type
action find
entity Q18295978
relation P684
type Q863908
[ANSWER]
['Q18295978', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?t ) WHERE { ?j rdf:type ontology:Q863908 . resource:Q18295978 property:P684 ?j }
RBMS3
1
action count
action filter_type
action find
entity Rbms3
relation ortholog
type nucleic acid sequence
['Rbms3', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?t ) WHERE { ?j rdf:type ontology:nucleic_acid_sequence . resource:Rbms3 property:ortholog ?j }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q21115989
P129
Q181394 Q181394 Q8386
USER
Which nutrients do lesser number of nutrients or drugs collaborate with than Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find_reverse
entity Q21115989
relation P129
type Q181394
type Q8386
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?j WHERE { { SELECT DISTINCT ( COUNT ( ?b ) AS ?w ) WHERE { ?b property:P129 resource:Q21115989 . { ?b rdf:type ?d . VALUES ( ?d ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } } } . FILTER ( ?n < ?w ) . { SELECT DISTINCT ?j ( COUNT ( ?c ) AS ?n ) WHERE { { ?c property:P129 ?j . ?j rdf:type ontology:Q181394 . ?c rdf:type ontology:Q181394 } UNION { ?c property:P129 ?j . ?j rdf:type ontology:Q181394 . ?c rdf:type ontology:Q8386 } } GROUP BY ?j } }
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find_reverse
entity Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?j WHERE { { SELECT DISTINCT ( COUNT ( ?b ) AS ?w ) WHERE { ?b property:physically_interacts_with resource:Potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_1 . { ?b rdf:type ?d . VALUES ( ?d ) { ( ontology:nutrient ) ( ontology:drug ) } } } } . FILTER ( ?n < ?w ) . { SELECT DISTINCT ?j ( COUNT ( ?c ) AS ?n ) WHERE { { ?c property:physically_interacts_with ?j . ?j rdf:type ontology:nutrient . ?c rdf:type ontology:nutrient } UNION { ?c property:physically_interacts_with ?j . ?j rdf:type ontology:nutrient . ?c rdf:type ontology:drug } } GROUP BY ?j } }
[]
nutrient nutrient drug
Q425201 Q21113719 Q5514576
SYSTEM
Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1, Glycogen synthase kinase-3 beta
Q21135479 Q21120657 Q21987720 Q5635781 Q21494718 Q21115219 Q21119830 Q4217286 Q21108693 Q12746346 Q21108695 Q21123087 Q21988043 Q21985448 Q21172741 Q21111688 Q1407929 Q21173169 Q21107052 Q21108135 Q21113310 Q21113312 Q21113313 Q21113314 Q21113317 Q21113170 Q21113172 Q21113176 Q21126314 Q4042017 Q21496155 Q6590338 Q7073181 Q21107107 Q7317662 Q22675842 Q14911986 Q21100441 Q21113552 Q21114547 Q14865158 Q21110488 Q906403 Q21990430 Q21981115 Q420604 Q21135449 Q21108357 Q21126214 Q21156663 Q5500227 Q21118967 Q6589868 Q21108408 Q21118678 Q21984552 Q21123083 Q7923221 Q21106653 Q21118293 Q21130016 Q21111689 Q908221 Q21496578 Q5323823 Q22677568 Q21496575 Q21496576 Q21109253 Q21100773 Q21100774 Q21988044 Q21107535 Q21114341 Q21988816 Q21113326 Q21984063 Q21122125 Q4812911 Q21103089 Q21112081 Q4459747 Q511968 Q21130042 Q21123723 Q5198256 Q21107884 Q15324125 Q7275807 Q2640417 Q21125231 Q21100472 Q21123725 Q21155668 Q1147372 Q5514576 Q21119824 Q21980258 Q21119826 Q2385013 Q5419640 Q21494502 Q21114166 Q7671499 Q21104645 Q408853 Q21130460 Q21097266 Q5512777 Q21118785 Q21154430 Q21173746 Q21496383 Q21113719 Q21139471 Q21113101 Q21113100 Q424031 Q21110304 Q21114338 Q21132140 Q21126773 Q21105660 Q21991514 Q21991512 Q21113155 Q21981993 Q21171763 Q4650061 Q21112691 Q21499097 Q21114807 Q21208052 Q21987569 Q21173156 Q21121807 Q21124061 Q4822491 Q21126205 Q21108578 Q21113173 Q21120142 Q411978 Q21106540 Q21111184 Q4859538 Q21139123 Q21114291 Q14891582 Q21496918 Q21106795 Q21113926 Q21114574 Q21112525 Q21118072 Q7251483 Q21113330 Q5419638 Q21113337 Q21104817 Q14914570 Q21113158 Q21135903 Q21107088 Q21113152 Q21145932 Q21173215 Q21123245 Q5014947 Q21123246 Q5512833 Q5500223 Q21132248 Q21100464 Q15323346 Q21988035 Q21105636 Q21126242 Q5572421 Q21107443 Q21497124 Q21123241 Q6590408 Q21497128 Q21132652 Q6594119 Q21119694 Q21111879 Q21988026 Q21988024 Q7671460 Q7671461 Q21173504 Q7671469 Q12746382 Q21497155 Q7671464 Q21121466 Q21110933 Q6714411 Q7118491 Q13566123 Q21990458 Q21120698 Q21113274 Q7120326 Q21113278 Q21113115 Q6881891 Q7202245 Q2083074 Q21124401 Q4897285 Q21111495 Q21123752 Q21172884 Q21172886 Q21122109 Q6534535 Q21121716 Q21130508 Q21123216 Q22679008 Q21113831 Q4377404 Q4822488 Q21116933 Q5014193 Q21114819 Q288395 Q21120144 Q6714959 Q21119816 Q10988613 Q21123722 Q5014192 Q21108517 Q21154413 Q5611755 Q21111517 Q21988152 Q21982871 Q21113305 Q21119825 Q21113169 Q21113168 Q21113161 Q21172271 Q7455513 Q21119591 Q21114857 Q21100450 Q21100324 Q21132247 Q21106448 Q21987287 Q21118676 Q21118677 Q21108701 Q425201 Q9020944 Q21121379 Q21112289 Q21157860 Q7671478 Q21113099 Q21126947 Q21113295 Q21113297 Q21113292 Q21107799 Q21113349 Q21494464 Q21983336 Q288431 Q21107871 Q6589190 Q21097216 Q21122509 Q21114955 Q5201183 Q415762 Q6714402 Q21135787 Q571999 Q21495791 Q21100886 Q21115429 Q22683566 Q7002508 Q21121490 Q2356259 Q414401 Q21113127 Q21986206
(c(Q181394)|c(Q8386),P129,c(Q181394))
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find_reverse
entity Q21115989
relation P129
type Q181394
type Q8386
[ANSWERS] lesser number of nutrients or drugs collaborate with than Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?j WHERE { { SELECT DISTINCT ( COUNT ( ?b ) AS ?w ) WHERE { ?b property:P129 resource:Q21115989 . { ?b rdf:type ?d . VALUES ( ?d ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } } } . FILTER ( ?n < ?w ) . { SELECT DISTINCT ?j ( COUNT ( ?c ) AS ?n ) WHERE { { ?c property:P129 ?j . ?j rdf:type ontology:Q181394 . ?c rdf:type ontology:Q181394 } UNION { ?c property:P129 ?j . ?j rdf:type ontology:Q181394 . ?c rdf:type ontology:Q8386 } } GROUP BY ?j } }
Sodium channel protein type 8 subunit alpha Interleukin-23 subunit alpha Mas-related G-protein coupled receptor member D GTPase HRas Lysophosphatidic acid receptor 2 Oxysterols receptor LXR-beta Potassium channel subfamily K member 18 Cathepsin S G-protein coupled receptor 87 Nociceptin receptor G-protein coupled receptor 84 Neuromedin-K receptor Sphingosine 1-phosphate receptor 4 Hydroxycarboxylic acid receptor 1 G-protein coupled receptor 3 B2 bradykinin receptor Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Gap junction alpha-4 protein Neuronal acetylcholine receptor subunit alpha-10 Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit beta-3 Gamma-aminobutyric acid receptor subunit rho-2 Gamma-aminobutyric acid receptor subunit beta-2 Gamma-aminobutyric acid receptor subunit epsilon Gap junction delta-3 protein Gap junction delta-4 protein Gap junction delta-2 protein Sodium channel protein type 1 subunit alpha GTPase KRas Bromodomain testis-specific protein Metabotropic glutamate receptor 7 2-oxoglutarate receptor 1 Gap junction alpha-3 protein Nuclear receptor subfamily 1 group D member 2 Rhodopsin kinase Nociceptin receptor Bromodomain-containing protein 4 ATP-sensitive inward rectifier potassium channel 14 Nitric oxide synthase, inducible Potassium voltage-gated channel subfamily KQT member 1 Serine/threonine-protein kinase BRSK2 Protein kinase C zeta type P2Y purinoceptor 14 G-protein coupled receptor 6 Phenylalanine-4-hydroxylase Sodium channel protein type 3 subunit alpha Cystine/glutamate transporter Sphingosine 1-phosphate receptor 1 Mitogen-activated protein kinase 11 Free fatty acid receptor 3 G-protein coupled receptor 183 Metabotropic glutamate receptor 6 H(+)/Cl(-) exchange transporter 3 Melanocortin receptor 3 Potassium voltage-gated channel subfamily A member 3 Substance-K receptor Vesicular acetylcholine transporter Solute carrier family 23 member 1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic Serine/threonine-protein kinase PAK 2 B1 bradykinin receptor Indoleamine 2,3-dioxygenase 1 Lysophosphatidic acid receptor 3 Histone acetyltransferase p300 Corticotropin-releasing factor receptor 1 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Protein kinase C iota type Chloride transport protein 6 H(+)/Cl(-) exchange transporter 7 Sphingosine 1-phosphate receptor 3 Dual specificity mitogen-activated protein kinase kinase 6 Excitatory amino acid transporter 3 Neuropeptide S receptor Gamma-aminobutyric acid receptor subunit gamma-1 G-protein coupled receptor family C group 6 member A Serine palmitoyltransferase 3 Serine/threonine-protein kinase ATR Homeodomain-interacting protein kinase 1 Gap junction gamma-3 protein Toll-like receptor 8 Cyclin-dependent kinase 2 Carbonyl reductase [NADPH] 1 Pannexin-2 Cyclin-dependent kinase 9 Potassium voltage-gated channel subfamily B member 1 Transient receptor potential cation channel subfamily V member 4 Nuclear receptor ROR-alpha Aldehyde dehydrogenase, mitochondrial Solute carrier organic anion transporter family member 1A2 Bromodomain testis-specific protein Pannexin-1 Death-associated protein kinase 1 Cyclin-dependent kinase 1 Glycogen synthase kinase-3 beta G protein-activated inward rectifier potassium channel 2 Short transient receptor potential channel 2 G protein-activated inward rectifier potassium channel 1 Translocator protein Excitatory amino acid transporter 5 G-protein coupled receptor 35 Hepatocyte nuclear factor 4-alpha Transient receptor potential cation channel subfamily V member 3 Dual specificity mitogen-activated protein kinase kinase 4 Nitric oxide synthase, endothelial Methionine aminopeptidase 2 Angiopoietin-1 receptor Gamma-aminobutyric acid receptor subunit alpha-4 Mas-related G-protein coupled receptor member D Lysophosphatidic acid receptor 4 Melanocyte-stimulating hormone receptor Gastrin/cholecystokinin type B receptor NAD-dependent protein deacetylase sirtuin-1 Mitogen-activated protein kinase 10 Gap junction beta-6 protein Gap junction beta-5 protein Mevalonate kinase Galanin receptor type 1 Excitatory amino acid transporter 2 Aurora kinase C Putative P2Y purinoceptor 10 Cyclic nucleotide-gated cation channel alpha-3 Trace amine-associated receptor 3 Trace amine-associated receptor 5 Gap junction gamma-1 protein fMet-Leu-Phe receptor G-protein coupled receptor 12 Bile salt export pump Beta-adrenergic receptor kinase 2 Retinoic acid receptor RXR-alpha Lysine-specific demethylase 7A Sodium/myo-inositol cotransporter ATP-sensitive inward rectifier potassium channel 15 Bcl-2-like protein 1 P2Y purinoceptor 14 Neurotensin receptor type 1 Aurora kinase B Sphingosine 1-phosphate receptor 4 Squalene synthase Gap junction beta-4 protein Neuropeptide Y receptor type 1 Thromboxane A2 receptor Geranylgeranyl pyrophosphate synthase Neuronal acetylcholine receptor subunit alpha-9 Metabotropic glutamate receptor 2 Lysophosphatidic acid receptor 2 Interleukin-17A Transient receptor potential cation channel subfamily V member 6 Lysophosphatidic acid receptor 1 cAMP-specific 3',5'-cyclic phosphodiesterase 4D Cholecystokinin receptor type A Gamma-aminobutyric acid receptor subunit beta-1 Serine/threonine-protein kinase N1 Steroid hormone receptor ERR1 Interferon-induced, double-stranded RNA-activated protein kinase Gamma-aminobutyric acid receptor subunit gamma-3 Excitatory amino acid transporter 4 Gamma-aminobutyric acid receptor subunit theta Receptor tyrosine-protein kinase erbB-4 Transient receptor potential cation channel subfamily M member 6 Gap junction alpha-8 protein Vasoactive intestinal polypeptide receptor 1 Gap junction alpha-10 protein Gap junction alpha-5 protein Phospholipase D2 Serine/threonine-protein kinase 3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A Cytochrome P450 1B1 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C Cyclin-G-associated kinase Free fatty acid receptor 2 G protein-coupled receptor kinase 6 Bromodomain-containing protein 3 Nuclear receptor subfamily 1 group D member 1 Sphingosine 1-phosphate receptor 5 cGMP-gated cation channel alpha-1 Sphingosine 1-phosphate receptor 5 Excitatory amino acid transporter 1 N-formyl peptide receptor 2 B2 bradykinin receptor Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B Metabotropic glutamate receptor 8 B1 bradykinin receptor Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Potassium voltage-gated channel subfamily A member 2 Sphingosine 1-phosphate receptor 2 Sphingosine 1-phosphate receptor 1 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Interstitial collagenase Short transient receptor potential channel 6 Oxoeicosanoid receptor 1 Voltage-dependent L-type calcium channel subunit alpha-1S Short transient receptor potential channel 4 Sphingosine 1-phosphate receptor 2 Probable G-protein coupled receptor 63 Mitogen-activated protein kinase 8 Histone acetyltransferase KAT2B Neuropeptide FF receptor 2 Prostaglandin F2-alpha receptor P2Y purinoceptor 6 Fatty-acid amide hydrolase 1 cAMP-dependent protein kinase catalytic subunit alpha Fatty-acid amide hydrolase 2 Gap junction beta-1 protein Mitogen-activated protein kinase 9 Platelet-activating factor receptor Aquaporin-1 Solute carrier family 15 member 1 Beta-adrenergic receptor kinase 1 Calcium/calmodulin-dependent protein kinase type II subunit beta Serine/threonine-protein kinase pim-2 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Serine palmitoyltransferase 2 Leukotriene B4 receptor 2 Nitric oxide synthase, brain Inhibitor of nuclear factor kappa-B kinase subunit alpha Serine/threonine-protein kinase N2 Cathepsin K Type-2 angiotensin II receptor Presenilin-1 Aurora kinase A Cyclin-dependent-like kinase 5 Casein kinase I isoform delta Lysine-specific demethylase 2A Histamine H3 receptor Neuropeptide Y receptor type 2 Mucolipin-1 Potassium channel subfamily K member 3 Leukotriene B4 receptor 1 Pannexin-3 Casein kinase I isoform epsilon TRAF2 and NCK-interacting protein kinase Cathepsin Z Growth hormone secretagogue receptor type 1 cAMP-dependent protein kinase catalytic subunit beta Serine palmitoyltransferase 1 Glucocorticoid receptor Gamma-aminobutyric acid receptor subunit gamma-2 G protein-activated inward rectifier potassium channel 4 Gap junction beta-7 protein Gap junction gamma-2 protein Gap junction alpha-9 protein Platelet-activating factor acetylhydrolase Serum amyloid P-component Neurotensin receptor type 2 Protein kinase C eta type Bromodomain-containing protein 2 Serine/threonine-protein kinase pim-1 G protein-coupled receptor kinase 4 Aquaporin-9 Neuromedin-K receptor Melanocortin receptor 4 Melanocortin receptor 5 Glutamate receptor ionotropic, kainate 1 Apoptosis regulator Bcl-2 Tyrosine-protein kinase Lck Sodium/myo-inositol cotransporter 2 Oxysterols receptor LXR-alpha Cystathionine gamma-lyase Transient receptor potential cation channel subfamily M member 1 Gap junction beta-3 protein GTPase NRas Gamma-aminobutyric acid receptor subunit pi Gamma-aminobutyric acid receptor subunit delta Gamma-aminobutyric acid receptor subunit rho-3 Inositol 1,4,5-trisphosphate receptor type 2 Metabotropic glutamate receptor 4 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor Histamine H3 receptor Metabotropic glutamate receptor 1 Potassium voltage-gated channel subfamily A member 6 Metabotropic glutamate receptor 5 Tyrosine-protein kinase Yes Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 3-phosphoinositide-dependent protein kinase 1 Cystathionine beta-synthase Dopamine beta-hydroxylase Mitogen-activated protein kinase 14 Tubulin beta-3 chain Inhibitor of nuclear factor kappa-B kinase subunit beta Metabotropic glutamate receptor 5 Lanosterol 14-alpha demethylase High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Histone lysine demethylase PHF8 Neuropeptide FF receptor 1 Sphingosine 1-phosphate receptor 3 Gap junction alpha-1 protein Purine nucleoside phosphorylase Gap junction beta-2 protein Neurotensin receptor type 2
Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1 and Glycogen synthase kinase-3 beta lesser number of nutrients or drugs collaborate with than Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Apoptosis regulator Bcl-2 NAD-dependent protein deacetylase sirtuin-1 Glycogen synthase kinase-3 beta
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find_reverse
entity Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?j WHERE { { SELECT DISTINCT ( COUNT ( ?b ) AS ?w ) WHERE { ?b property:physically_interacts_with resource:Potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_1 . { ?b rdf:type ?d . VALUES ( ?d ) { ( ontology:nutrient ) ( ontology:drug ) } } } } . FILTER ( ?n < ?w ) . { SELECT DISTINCT ?j ( COUNT ( ?c ) AS ?n ) WHERE { { ?c property:physically_interacts_with ?j . ?j rdf:type ontology:nutrient . ?c rdf:type ontology:nutrient } UNION { ?c property:physically_interacts_with ?j . ?j rdf:type ontology:nutrient . ?c rdf:type ontology:drug } } GROUP BY ?j } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type|Incomplete
Q419999
P129
Q181394 Q181394 Q8386
USER
And how about Transthyretin?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find_reverse
entity Q419999
relation P129
type Q181394
type Q8386
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?a WHERE { { SELECT DISTINCT ( COUNT ( ?e ) AS ?m ) ?a WHERE { ?e rdf:type ?z . VALUES ( ?z ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } } GROUP BY ?a } . FILTER ( ?m < ?r ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { { { ?o rdf:type ontology:Q181394 } UNION { ?o rdf:type ontology:Q8386 } } . ?o property:P129 resource:Q419999 } } }
Transthyretin
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find_reverse
entity Transthyretin
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?a WHERE { { SELECT DISTINCT ( COUNT ( ?e ) AS ?m ) ?a WHERE { ?e rdf:type ?z . VALUES ( ?z ) { ( ontology:drug ) ( ontology:nutrient ) } } GROUP BY ?a } . FILTER ( ?m < ?r ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { { { ?o rdf:type ontology:nutrient } UNION { ?o rdf:type ontology:drug } } . ?o property:physically_interacts_with resource:Transthyretin } } }
[]
nutrient nutrient drug
Q425201 Q21113719 Q5514576
SYSTEM
Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1, Glycogen synthase kinase-3 beta
Q21135479 Q21120657 Q21987720 Q5635781 Q21494718 Q21115219 Q21119830 Q4217286 Q21108693 Q12746346 Q21108695 Q21123087 Q21988043 Q21985448 Q21172741 Q21111688 Q1407929 Q21173169 Q21107052 Q21108135 Q21113310 Q21113312 Q21113313 Q21113314 Q21113317 Q21113170 Q21113172 Q21113176 Q21126314 Q4042017 Q21496155 Q6590338 Q7073181 Q21107107 Q7317662 Q22675842 Q14911986 Q21100441 Q21113552 Q21114547 Q14865158 Q21110488 Q906403 Q21990430 Q21981115 Q420604 Q21135449 Q21108357 Q21126214 Q21156663 Q5500227 Q21118967 Q6589868 Q21108408 Q21118678 Q21984552 Q21123083 Q7923221 Q21106653 Q21118293 Q21130016 Q21111689 Q908221 Q21496578 Q5323823 Q22677568 Q21496575 Q21496576 Q21109253 Q21100773 Q21100774 Q21988044 Q21107535 Q21114341 Q21988816 Q21113326 Q21984063 Q21122125 Q4812911 Q21103089 Q21112081 Q4459747 Q511968 Q21130042 Q21123723 Q5198256 Q21107884 Q15324125 Q7275807 Q2640417 Q21125231 Q21100472 Q21123725 Q21155668 Q1147372 Q5514576 Q21119824 Q21980258 Q21119826 Q2385013 Q5419640 Q21494502 Q21114166 Q7671499 Q21104645 Q408853 Q21130460 Q21097266 Q5512777 Q21118785 Q21154430 Q21173746 Q21496383 Q21113719 Q21139471 Q21113101 Q21113100 Q424031 Q21110304 Q21114338 Q21132140 Q21126773 Q21105660 Q21991514 Q21991512 Q21113155 Q21981993 Q21171763 Q4650061 Q21112691 Q21499097 Q21114807 Q21208052 Q21987569 Q21173156 Q21121807 Q21124061 Q4822491 Q21126205 Q21108578 Q21113173 Q21120142 Q411978 Q21106540 Q21111184 Q4859538 Q21139123 Q21114291 Q14891582 Q21496918 Q21106795 Q21113926 Q21114574 Q21112525 Q21118072 Q7251483 Q21113330 Q5419638 Q21113337 Q21104817 Q14914570 Q21113158 Q21135903 Q21107088 Q21113152 Q21145932 Q21173215 Q21123245 Q5014947 Q21123246 Q5512833 Q5500223 Q21132248 Q21100464 Q15323346 Q21988035 Q21105636 Q21126242 Q5572421 Q21107443 Q21497124 Q21123241 Q6590408 Q21497128 Q21132652 Q6594119 Q21119694 Q21111879 Q21988026 Q21988024 Q7671460 Q7671461 Q21173504 Q7671469 Q12746382 Q21497155 Q7671464 Q21121466 Q21110933 Q6714411 Q7118491 Q13566123 Q21990458 Q21120698 Q21113274 Q7120326 Q21113278 Q21113115 Q6881891 Q7202245 Q2083074 Q21124401 Q4897285 Q21111495 Q21123752 Q21172884 Q21172886 Q21122109 Q6534535 Q21121716 Q21130508 Q21123216 Q22679008 Q21113831 Q4377404 Q4822488 Q21116933 Q5014193 Q21114819 Q288395 Q21120144 Q6714959 Q21119816 Q10988613 Q21123722 Q5014192 Q21108517 Q21154413 Q5611755 Q21111517 Q21988152 Q21982871 Q21113305 Q21119825 Q21113169 Q21113168 Q21113161 Q21172271 Q7455513 Q21119591 Q21114857 Q21100450 Q21100324 Q21132247 Q21106448 Q21987287 Q21118676 Q21118677 Q21108701 Q425201 Q9020944 Q21121379 Q21112289 Q21157860 Q7671478 Q21113099 Q21126947 Q21113295 Q21113297 Q21113292 Q21107799 Q21113349 Q21494464 Q21983336 Q288431 Q21107871 Q6589190 Q21097216 Q21122509 Q21114955 Q5201183 Q415762 Q6714402 Q21135787 Q571999 Q21495791 Q21100886 Q21115429 Q22683566 Q7002508 Q21121490 Q2356259 Q414401 Q21113127 Q21986206
(c(Q181394)|c(Q8386),P129,c(Q181394))
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find_reverse
entity Q419999
relation P129
type Q181394
type Q8386
[ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?a WHERE { { SELECT DISTINCT ( COUNT ( ?e ) AS ?m ) ?a WHERE { ?e rdf:type ?z . VALUES ( ?z ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } } GROUP BY ?a } . FILTER ( ?m < ?r ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { { { ?o rdf:type ontology:Q181394 } UNION { ?o rdf:type ontology:Q8386 } } . ?o property:P129 resource:Q419999 } } }
Sodium channel protein type 8 subunit alpha Interleukin-23 subunit alpha Mas-related G-protein coupled receptor member D GTPase HRas Lysophosphatidic acid receptor 2 Oxysterols receptor LXR-beta Potassium channel subfamily K member 18 Cathepsin S G-protein coupled receptor 87 Nociceptin receptor G-protein coupled receptor 84 Neuromedin-K receptor Sphingosine 1-phosphate receptor 4 Hydroxycarboxylic acid receptor 1 G-protein coupled receptor 3 B2 bradykinin receptor Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Gap junction alpha-4 protein Neuronal acetylcholine receptor subunit alpha-10 Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit beta-3 Gamma-aminobutyric acid receptor subunit rho-2 Gamma-aminobutyric acid receptor subunit beta-2 Gamma-aminobutyric acid receptor subunit epsilon Gap junction delta-3 protein Gap junction delta-4 protein Gap junction delta-2 protein Sodium channel protein type 1 subunit alpha GTPase KRas Bromodomain testis-specific protein Metabotropic glutamate receptor 7 2-oxoglutarate receptor 1 Gap junction alpha-3 protein Nuclear receptor subfamily 1 group D member 2 Rhodopsin kinase Nociceptin receptor Bromodomain-containing protein 4 ATP-sensitive inward rectifier potassium channel 14 Nitric oxide synthase, inducible Potassium voltage-gated channel subfamily KQT member 1 Serine/threonine-protein kinase BRSK2 Protein kinase C zeta type P2Y purinoceptor 14 G-protein coupled receptor 6 Phenylalanine-4-hydroxylase Sodium channel protein type 3 subunit alpha Cystine/glutamate transporter Sphingosine 1-phosphate receptor 1 Mitogen-activated protein kinase 11 Free fatty acid receptor 3 G-protein coupled receptor 183 Metabotropic glutamate receptor 6 H(+)/Cl(-) exchange transporter 3 Melanocortin receptor 3 Potassium voltage-gated channel subfamily A member 3 Substance-K receptor Vesicular acetylcholine transporter Solute carrier family 23 member 1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic Serine/threonine-protein kinase PAK 2 B1 bradykinin receptor Indoleamine 2,3-dioxygenase 1 Lysophosphatidic acid receptor 3 Histone acetyltransferase p300 Corticotropin-releasing factor receptor 1 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Protein kinase C iota type Chloride transport protein 6 H(+)/Cl(-) exchange transporter 7 Sphingosine 1-phosphate receptor 3 Dual specificity mitogen-activated protein kinase kinase 6 Excitatory amino acid transporter 3 Neuropeptide S receptor Gamma-aminobutyric acid receptor subunit gamma-1 G-protein coupled receptor family C group 6 member A Serine palmitoyltransferase 3 Serine/threonine-protein kinase ATR Homeodomain-interacting protein kinase 1 Gap junction gamma-3 protein Toll-like receptor 8 Cyclin-dependent kinase 2 Carbonyl reductase [NADPH] 1 Pannexin-2 Cyclin-dependent kinase 9 Potassium voltage-gated channel subfamily B member 1 Transient receptor potential cation channel subfamily V member 4 Nuclear receptor ROR-alpha Aldehyde dehydrogenase, mitochondrial Solute carrier organic anion transporter family member 1A2 Bromodomain testis-specific protein Pannexin-1 Death-associated protein kinase 1 Cyclin-dependent kinase 1 Glycogen synthase kinase-3 beta G protein-activated inward rectifier potassium channel 2 Short transient receptor potential channel 2 G protein-activated inward rectifier potassium channel 1 Translocator protein Excitatory amino acid transporter 5 G-protein coupled receptor 35 Hepatocyte nuclear factor 4-alpha Transient receptor potential cation channel subfamily V member 3 Dual specificity mitogen-activated protein kinase kinase 4 Nitric oxide synthase, endothelial Methionine aminopeptidase 2 Angiopoietin-1 receptor Gamma-aminobutyric acid receptor subunit alpha-4 Mas-related G-protein coupled receptor member D Lysophosphatidic acid receptor 4 Melanocyte-stimulating hormone receptor Gastrin/cholecystokinin type B receptor NAD-dependent protein deacetylase sirtuin-1 Mitogen-activated protein kinase 10 Gap junction beta-6 protein Gap junction beta-5 protein Mevalonate kinase Galanin receptor type 1 Excitatory amino acid transporter 2 Aurora kinase C Putative P2Y purinoceptor 10 Cyclic nucleotide-gated cation channel alpha-3 Trace amine-associated receptor 3 Trace amine-associated receptor 5 Gap junction gamma-1 protein fMet-Leu-Phe receptor G-protein coupled receptor 12 Bile salt export pump Beta-adrenergic receptor kinase 2 Retinoic acid receptor RXR-alpha Lysine-specific demethylase 7A Sodium/myo-inositol cotransporter ATP-sensitive inward rectifier potassium channel 15 Bcl-2-like protein 1 P2Y purinoceptor 14 Neurotensin receptor type 1 Aurora kinase B Sphingosine 1-phosphate receptor 4 Squalene synthase Gap junction beta-4 protein Neuropeptide Y receptor type 1 Thromboxane A2 receptor Geranylgeranyl pyrophosphate synthase Neuronal acetylcholine receptor subunit alpha-9 Metabotropic glutamate receptor 2 Lysophosphatidic acid receptor 2 Interleukin-17A Transient receptor potential cation channel subfamily V member 6 Lysophosphatidic acid receptor 1 cAMP-specific 3',5'-cyclic phosphodiesterase 4D Cholecystokinin receptor type A Gamma-aminobutyric acid receptor subunit beta-1 Serine/threonine-protein kinase N1 Steroid hormone receptor ERR1 Interferon-induced, double-stranded RNA-activated protein kinase Gamma-aminobutyric acid receptor subunit gamma-3 Excitatory amino acid transporter 4 Gamma-aminobutyric acid receptor subunit theta Receptor tyrosine-protein kinase erbB-4 Transient receptor potential cation channel subfamily M member 6 Gap junction alpha-8 protein Vasoactive intestinal polypeptide receptor 1 Gap junction alpha-10 protein Gap junction alpha-5 protein Phospholipase D2 Serine/threonine-protein kinase 3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A Cytochrome P450 1B1 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C Cyclin-G-associated kinase Free fatty acid receptor 2 G protein-coupled receptor kinase 6 Bromodomain-containing protein 3 Nuclear receptor subfamily 1 group D member 1 Sphingosine 1-phosphate receptor 5 cGMP-gated cation channel alpha-1 Sphingosine 1-phosphate receptor 5 Excitatory amino acid transporter 1 N-formyl peptide receptor 2 B2 bradykinin receptor Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B Metabotropic glutamate receptor 8 B1 bradykinin receptor Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Potassium voltage-gated channel subfamily A member 2 Sphingosine 1-phosphate receptor 2 Sphingosine 1-phosphate receptor 1 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Interstitial collagenase Short transient receptor potential channel 6 Oxoeicosanoid receptor 1 Voltage-dependent L-type calcium channel subunit alpha-1S Short transient receptor potential channel 4 Sphingosine 1-phosphate receptor 2 Probable G-protein coupled receptor 63 Mitogen-activated protein kinase 8 Histone acetyltransferase KAT2B Neuropeptide FF receptor 2 Prostaglandin F2-alpha receptor P2Y purinoceptor 6 Fatty-acid amide hydrolase 1 cAMP-dependent protein kinase catalytic subunit alpha Fatty-acid amide hydrolase 2 Gap junction beta-1 protein Mitogen-activated protein kinase 9 Platelet-activating factor receptor Aquaporin-1 Solute carrier family 15 member 1 Beta-adrenergic receptor kinase 1 Calcium/calmodulin-dependent protein kinase type II subunit beta Serine/threonine-protein kinase pim-2 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Serine palmitoyltransferase 2 Leukotriene B4 receptor 2 Nitric oxide synthase, brain Inhibitor of nuclear factor kappa-B kinase subunit alpha Serine/threonine-protein kinase N2 Cathepsin K Type-2 angiotensin II receptor Presenilin-1 Aurora kinase A Cyclin-dependent-like kinase 5 Casein kinase I isoform delta Lysine-specific demethylase 2A Histamine H3 receptor Neuropeptide Y receptor type 2 Mucolipin-1 Potassium channel subfamily K member 3 Leukotriene B4 receptor 1 Pannexin-3 Casein kinase I isoform epsilon TRAF2 and NCK-interacting protein kinase Cathepsin Z Growth hormone secretagogue receptor type 1 cAMP-dependent protein kinase catalytic subunit beta Serine palmitoyltransferase 1 Glucocorticoid receptor Gamma-aminobutyric acid receptor subunit gamma-2 G protein-activated inward rectifier potassium channel 4 Gap junction beta-7 protein Gap junction gamma-2 protein Gap junction alpha-9 protein Platelet-activating factor acetylhydrolase Serum amyloid P-component Neurotensin receptor type 2 Protein kinase C eta type Bromodomain-containing protein 2 Serine/threonine-protein kinase pim-1 G protein-coupled receptor kinase 4 Aquaporin-9 Neuromedin-K receptor Melanocortin receptor 4 Melanocortin receptor 5 Glutamate receptor ionotropic, kainate 1 Apoptosis regulator Bcl-2 Tyrosine-protein kinase Lck Sodium/myo-inositol cotransporter 2 Oxysterols receptor LXR-alpha Cystathionine gamma-lyase Transient receptor potential cation channel subfamily M member 1 Gap junction beta-3 protein GTPase NRas Gamma-aminobutyric acid receptor subunit pi Gamma-aminobutyric acid receptor subunit delta Gamma-aminobutyric acid receptor subunit rho-3 Inositol 1,4,5-trisphosphate receptor type 2 Metabotropic glutamate receptor 4 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor Histamine H3 receptor Metabotropic glutamate receptor 1 Potassium voltage-gated channel subfamily A member 6 Metabotropic glutamate receptor 5 Tyrosine-protein kinase Yes Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 3-phosphoinositide-dependent protein kinase 1 Cystathionine beta-synthase Dopamine beta-hydroxylase Mitogen-activated protein kinase 14 Tubulin beta-3 chain Inhibitor of nuclear factor kappa-B kinase subunit beta Metabotropic glutamate receptor 5 Lanosterol 14-alpha demethylase High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Histone lysine demethylase PHF8 Neuropeptide FF receptor 1 Sphingosine 1-phosphate receptor 3 Gap junction alpha-1 protein Purine nucleoside phosphorylase Gap junction beta-2 protein Neurotensin receptor type 2
Apoptosis regulator Bcl-2 NAD-dependent protein deacetylase sirtuin-1 Glycogen synthase kinase-3 beta
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find_reverse
entity Transthyretin
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?a WHERE { { SELECT DISTINCT ( COUNT ( ?e ) AS ?m ) ?a WHERE { ?e rdf:type ?z . VALUES ( ?z ) { ( ontology:drug ) ( ontology:nutrient ) } } GROUP BY ?a } . FILTER ( ?m < ?r ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { { { ?o rdf:type ontology:nutrient } UNION { ?o rdf:type ontology:drug } } . ?o property:physically_interacts_with resource:Transthyretin } } }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q21108660 Q21113719
P681
Q15989253
USER
Which parts are the cell components of NAD-dependent protein deacetylase sirtuin-1 and Gamma-interferon-inducible lysosomal thiol reductase ?
AND((Q21113719,P681,c(Q15989253)), (Q21108660,P681,c(Q15989253)))
action filter_type
action intersection
action find
entity Q21113719
relation P681
action find
entity Q21108660
relation P681
type Q15989253
{'AND': [['Q21113719', 'P681', {'concept': 'Q15989253'}], ['Q21108660', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?o WHERE { resource:Q21113719 property:P681 ?o . resource:Q21108660 property:P681 ?o . ?o rdf:type ontology:Q15989253 }
Gamma-interferon-inducible lysosomal thiol reductase NAD-dependent protein deacetylase sirtuin-1
action filter_type
action intersection
action find
entity NAD-dependent protein deacetylase sirtuin-1
relation cell component
action find
entity Gamma-interferon-inducible lysosomal thiol reductase
relation cell component
type part
{'AND': [['NAD-dependent protein deacetylase sirtuin-1', 'cell component', {'concept': 'part'}], ['Gamma-interferon-inducible lysosomal thiol reductase', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?o WHERE { resource:NAD-dependent_protein_deacetylase_sirtuin-1 property:cell_component ?o . resource:Gamma-interferon-inducible_lysosomal_thiol_reductase property:cell_component ?o . ?o rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
AND((Q21113719,P681,c(Q15989253)), (Q21108660,P681,c(Q15989253)))
action filter_type
action intersection
action find
entity Q21113719
relation P681
action find
entity Q21108660
relation P681
type Q15989253
The [ANSWER] is the cell components of NAD-dependent protein deacetylase sirtuin-1 and Gamma-interferon-inducible lysosomal thiol reductase
{'AND': [['Q21113719', 'P681', {'concept': 'Q15989253'}], ['Q21108660', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?o WHERE { resource:Q21113719 property:P681 ?o . resource:Q21108660 property:P681 ?o . ?o rdf:type ontology:Q15989253 }
cytoplasm
The cytoplasm is the cell components of NAD-dependent protein deacetylase sirtuin-1 and Gamma-interferon-inducible lysosomal thiol reductase
cytoplasm
action filter_type
action intersection
action find
entity NAD-dependent protein deacetylase sirtuin-1
relation cell component
action find
entity Gamma-interferon-inducible lysosomal thiol reductase
relation cell component
type part
{'AND': [['NAD-dependent protein deacetylase sirtuin-1', 'cell component', {'concept': 'part'}], ['Gamma-interferon-inducible lysosomal thiol reductase', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?o WHERE { resource:NAD-dependent_protein_deacetylase_sirtuin-1 property:cell_component ?o . resource:Gamma-interferon-inducible_lysosomal_thiol_reductase property:cell_component ?o . ?o rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23477303 Q5514576
P688
Q863908
USER
Which nucleic acid sequences encode Glycogen synthase kinase-3 beta or Disulfide bond chaperone    Pro_1027 ?
OR((c(Q863908),P688,Q5514576), (c(Q863908),P688,Q23477303))
action filter_type
action union
action find_reverse
entity Q5514576
relation P688
action find_reverse
entity Q23477303
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q5514576'], [{'concept': 'Q863908'}, 'P688', 'Q23477303']]}
SELECT DISTINCT ?l WHERE { { { ?l property:P688 resource:Q23477303 } UNION { ?l property:P688 resource:Q5514576 } } . ?l rdf:type ontology:Q863908 }
Disulfide bond chaperone    Pro_1027 Glycogen synthase kinase-3 beta
action filter_type
action union
action find_reverse
entity Glycogen synthase kinase-3 beta
relation encodes
action find_reverse
entity Disulfide bond chaperone    Pro_1027
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Glycogen synthase kinase-3 beta'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'Disulfide bond chaperone    Pro_1027']]}
SELECT DISTINCT ?l WHERE { { { ?l property:encodes resource:Disulfide_bond_chaperone____Pro_1027 } UNION { ?l property:encodes resource:Glycogen_synthase_kinase-3_beta } } . ?l rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23330860 Q18258585
SYSTEM
Disulfide bond chaperone    Pro_1027, GSK3B
Q23330860 Q18258585
OR((c(Q863908),P688,Q5514576), (c(Q863908),P688,Q23477303))
action filter_type
action union
action find_reverse
entity Q5514576
relation P688
action find_reverse
entity Q23477303
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q5514576'], [{'concept': 'Q863908'}, 'P688', 'Q23477303']]}
SELECT DISTINCT ?l WHERE { { { ?l property:P688 resource:Q23477303 } UNION { ?l property:P688 resource:Q5514576 } } . ?l rdf:type ontology:Q863908 }
Disulfide bond chaperone    Pro_1027 GSK3B
Disulfide bond chaperone Pro 1027 and GSK3B encode Glycogen synthase kinase-3 beta or Disulfide bond chaperone Pro_1027
Disulfide bond chaperone    Pro_1027 GSK3B
action filter_type
action union
action find_reverse
entity Glycogen synthase kinase-3 beta
relation encodes
action find_reverse
entity Disulfide bond chaperone    Pro_1027
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Glycogen synthase kinase-3 beta'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'Disulfide bond chaperone    Pro_1027']]}
SELECT DISTINCT ?l WHERE { { { ?l property:encodes resource:Disulfide_bond_chaperone____Pro_1027 } UNION { ?l property:encodes resource:Glycogen_synthase_kinase-3_beta } } . ?l rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P129
Q181394 Q181394 Q8386
USER
Which nutrients do min number of nutrients or drugs interact with ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action argmin
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( MIN ( ?z ) AS ?y ) { SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) ?k WHERE { { ?q rdf:type ontology:Q181394 . ?k rdf:type ontology:Q181394 . ?q property:P129 ?k } UNION { ?q rdf:type ontology:Q8386 . ?k rdf:type ontology:Q181394 . ?q property:P129 ?k } } GROUP BY ?k } } . { SELECT DISTINCT ( COUNT ( ?a ) AS ?v ) ?o WHERE { { ?o rdf:type ontology:Q181394 . ?a rdf:type ontology:Q8386 . ?a property:P129 ?o } UNION { ?a property:P129 ?o . ?o rdf:type ontology:Q181394 . ?a rdf:type ontology:Q181394 } } GROUP BY ?o } . FILTER ( ?v = ?y ) }
action argmin
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( MIN ( ?z ) AS ?y ) { SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) ?k WHERE { { ?q rdf:type ontology:nutrient . ?k rdf:type ontology:nutrient . ?q property:physically_interacts_with ?k } UNION { ?q rdf:type ontology:drug . ?k rdf:type ontology:nutrient . ?q property:physically_interacts_with ?k } } GROUP BY ?k } } . { SELECT DISTINCT ( COUNT ( ?a ) AS ?v ) ?o WHERE { { ?o rdf:type ontology:nutrient . ?a rdf:type ontology:drug . ?a property:physically_interacts_with ?o } UNION { ?a property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient . ?a rdf:type ontology:nutrient } } GROUP BY ?o } . FILTER ( ?v = ?y ) }
[]
nutrient nutrient drug
Q425201 Q21113719 Q5514576
SYSTEM
Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1, Glycogen synthase kinase-3 beta
Q21135479 Q21120657 Q21987720 Q5635781 Q21494718 Q21115219 Q21119830 Q4217286 Q21108693 Q12746346 Q21108695 Q21123087 Q21988043 Q21985448 Q21172741 Q21111688 Q1407929 Q21173169 Q21107052 Q21108135 Q21113310 Q21113312 Q21113313 Q21113314 Q21113317 Q21113170 Q21113172 Q21113176 Q21126314 Q4042017 Q21496155 Q6590338 Q7073181 Q21107107 Q7317662 Q22675842 Q14911986 Q21100441 Q21113552 Q21114547 Q14865158 Q21110488 Q906403 Q21990430 Q21981115 Q420604 Q21135449 Q21108357 Q21126214 Q21156663 Q5500227 Q21118967 Q6589868 Q21108408 Q21118678 Q21984552 Q21123083 Q7923221 Q21106653 Q21118293 Q21130016 Q21111689 Q908221 Q21496578 Q5323823 Q22677568 Q21496575 Q21496576 Q21109253 Q21100773 Q21100774 Q21988044 Q21107535 Q21114341 Q21988816 Q21113326 Q21984063 Q21122125 Q4812911 Q21103089 Q21112081 Q4459747 Q511968 Q21130042 Q21123723 Q5198256 Q21107884 Q15324125 Q7275807 Q2640417 Q21125231 Q21100472 Q21123725 Q21155668 Q1147372 Q5514576 Q21119824 Q21980258 Q21119826 Q2385013 Q5419640 Q21494502 Q21114166 Q7671499 Q21104645 Q408853 Q21130460 Q21097266 Q5512777 Q21118785 Q21154430 Q21173746 Q21496383 Q21113719 Q21139471 Q21113101 Q21113100 Q424031 Q21110304 Q21114338 Q21132140 Q21126773 Q21105660 Q21991514 Q21991512 Q21113155 Q21981993 Q21171763 Q4650061 Q21112691 Q21499097 Q21114807 Q21208052 Q21987569 Q21173156 Q21121807 Q21124061 Q4822491 Q21126205 Q21108578 Q21113173 Q21120142 Q411978 Q21106540 Q21111184 Q4859538 Q21139123 Q21114291 Q14891582 Q21496918 Q21106795 Q21113926 Q21114574 Q21112525 Q21118072 Q7251483 Q21113330 Q5419638 Q21113337 Q21104817 Q14914570 Q21113158 Q21135903 Q21107088 Q21113152 Q21145932 Q21173215 Q21123245 Q5014947 Q21123246 Q5512833 Q5500223 Q21132248 Q21100464 Q15323346 Q21988035 Q21105636 Q21126242 Q5572421 Q21107443 Q21497124 Q21123241 Q6590408 Q21497128 Q21132652 Q6594119 Q21119694 Q21111879 Q21988026 Q21988024 Q7671460 Q7671461 Q21173504 Q7671469 Q12746382 Q21497155 Q7671464 Q21121466 Q21110933 Q6714411 Q7118491 Q13566123 Q21990458 Q21120698 Q21113274 Q7120326 Q21113278 Q21113115 Q6881891 Q7202245 Q2083074 Q21124401 Q4897285 Q21111495 Q21123752 Q21172884 Q21172886 Q21122109 Q6534535 Q21121716 Q21130508 Q21123216 Q22679008 Q21113831 Q4377404 Q4822488 Q21116933 Q5014193 Q21114819 Q288395 Q21120144 Q6714959 Q21119816 Q10988613 Q21123722 Q5014192 Q21108517 Q21154413 Q5611755 Q21111517 Q21988152 Q21982871 Q21113305 Q21119825 Q21113169 Q21113168 Q21113161 Q21172271 Q7455513 Q21119591 Q21114857 Q21100450 Q21100324 Q21132247 Q21106448 Q21987287 Q21118676 Q21118677 Q21108701 Q425201 Q9020944 Q21121379 Q21112289 Q21157860 Q7671478 Q21113099 Q21126947 Q21113295 Q21113297 Q21113292 Q21107799 Q21113349 Q21494464 Q21983336 Q288431 Q21107871 Q6589190 Q21097216 Q21122509 Q21114955 Q5201183 Q415762 Q6714402 Q21135787 Q571999 Q21495791 Q21100886 Q21115429 Q22683566 Q7002508 Q21121490 Q2356259 Q414401 Q21113127 Q21986206
(c(Q181394)|c(Q8386),P129,c(Q181394))
action argmin
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
Min number of nutrients or drugs interact with [ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( MIN ( ?z ) AS ?y ) { SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) ?k WHERE { { ?q rdf:type ontology:Q181394 . ?k rdf:type ontology:Q181394 . ?q property:P129 ?k } UNION { ?q rdf:type ontology:Q8386 . ?k rdf:type ontology:Q181394 . ?q property:P129 ?k } } GROUP BY ?k } } . { SELECT DISTINCT ( COUNT ( ?a ) AS ?v ) ?o WHERE { { ?o rdf:type ontology:Q181394 . ?a rdf:type ontology:Q8386 . ?a property:P129 ?o } UNION { ?a property:P129 ?o . ?o rdf:type ontology:Q181394 . ?a rdf:type ontology:Q181394 } } GROUP BY ?o } . FILTER ( ?v = ?y ) }
Sodium channel protein type 8 subunit alpha Interleukin-23 subunit alpha Mas-related G-protein coupled receptor member D GTPase HRas Lysophosphatidic acid receptor 2 Oxysterols receptor LXR-beta Potassium channel subfamily K member 18 Cathepsin S G-protein coupled receptor 87 Nociceptin receptor G-protein coupled receptor 84 Neuromedin-K receptor Sphingosine 1-phosphate receptor 4 Hydroxycarboxylic acid receptor 1 G-protein coupled receptor 3 B2 bradykinin receptor Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Gap junction alpha-4 protein Neuronal acetylcholine receptor subunit alpha-10 Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit beta-3 Gamma-aminobutyric acid receptor subunit rho-2 Gamma-aminobutyric acid receptor subunit beta-2 Gamma-aminobutyric acid receptor subunit epsilon Gap junction delta-3 protein Gap junction delta-4 protein Gap junction delta-2 protein Sodium channel protein type 1 subunit alpha GTPase KRas Bromodomain testis-specific protein Metabotropic glutamate receptor 7 2-oxoglutarate receptor 1 Gap junction alpha-3 protein Nuclear receptor subfamily 1 group D member 2 Rhodopsin kinase Nociceptin receptor Bromodomain-containing protein 4 ATP-sensitive inward rectifier potassium channel 14 Nitric oxide synthase, inducible Potassium voltage-gated channel subfamily KQT member 1 Serine/threonine-protein kinase BRSK2 Protein kinase C zeta type P2Y purinoceptor 14 G-protein coupled receptor 6 Phenylalanine-4-hydroxylase Sodium channel protein type 3 subunit alpha Cystine/glutamate transporter Sphingosine 1-phosphate receptor 1 Mitogen-activated protein kinase 11 Free fatty acid receptor 3 G-protein coupled receptor 183 Metabotropic glutamate receptor 6 H(+)/Cl(-) exchange transporter 3 Melanocortin receptor 3 Potassium voltage-gated channel subfamily A member 3 Substance-K receptor Vesicular acetylcholine transporter Solute carrier family 23 member 1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic Serine/threonine-protein kinase PAK 2 B1 bradykinin receptor Indoleamine 2,3-dioxygenase 1 Lysophosphatidic acid receptor 3 Histone acetyltransferase p300 Corticotropin-releasing factor receptor 1 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Protein kinase C iota type Chloride transport protein 6 H(+)/Cl(-) exchange transporter 7 Sphingosine 1-phosphate receptor 3 Dual specificity mitogen-activated protein kinase kinase 6 Excitatory amino acid transporter 3 Neuropeptide S receptor Gamma-aminobutyric acid receptor subunit gamma-1 G-protein coupled receptor family C group 6 member A Serine palmitoyltransferase 3 Serine/threonine-protein kinase ATR Homeodomain-interacting protein kinase 1 Gap junction gamma-3 protein Toll-like receptor 8 Cyclin-dependent kinase 2 Carbonyl reductase [NADPH] 1 Pannexin-2 Cyclin-dependent kinase 9 Potassium voltage-gated channel subfamily B member 1 Transient receptor potential cation channel subfamily V member 4 Nuclear receptor ROR-alpha Aldehyde dehydrogenase, mitochondrial Solute carrier organic anion transporter family member 1A2 Bromodomain testis-specific protein Pannexin-1 Death-associated protein kinase 1 Cyclin-dependent kinase 1 Glycogen synthase kinase-3 beta G protein-activated inward rectifier potassium channel 2 Short transient receptor potential channel 2 G protein-activated inward rectifier potassium channel 1 Translocator protein Excitatory amino acid transporter 5 G-protein coupled receptor 35 Hepatocyte nuclear factor 4-alpha Transient receptor potential cation channel subfamily V member 3 Dual specificity mitogen-activated protein kinase kinase 4 Nitric oxide synthase, endothelial Methionine aminopeptidase 2 Angiopoietin-1 receptor Gamma-aminobutyric acid receptor subunit alpha-4 Mas-related G-protein coupled receptor member D Lysophosphatidic acid receptor 4 Melanocyte-stimulating hormone receptor Gastrin/cholecystokinin type B receptor NAD-dependent protein deacetylase sirtuin-1 Mitogen-activated protein kinase 10 Gap junction beta-6 protein Gap junction beta-5 protein Mevalonate kinase Galanin receptor type 1 Excitatory amino acid transporter 2 Aurora kinase C Putative P2Y purinoceptor 10 Cyclic nucleotide-gated cation channel alpha-3 Trace amine-associated receptor 3 Trace amine-associated receptor 5 Gap junction gamma-1 protein fMet-Leu-Phe receptor G-protein coupled receptor 12 Bile salt export pump Beta-adrenergic receptor kinase 2 Retinoic acid receptor RXR-alpha Lysine-specific demethylase 7A Sodium/myo-inositol cotransporter ATP-sensitive inward rectifier potassium channel 15 Bcl-2-like protein 1 P2Y purinoceptor 14 Neurotensin receptor type 1 Aurora kinase B Sphingosine 1-phosphate receptor 4 Squalene synthase Gap junction beta-4 protein Neuropeptide Y receptor type 1 Thromboxane A2 receptor Geranylgeranyl pyrophosphate synthase Neuronal acetylcholine receptor subunit alpha-9 Metabotropic glutamate receptor 2 Lysophosphatidic acid receptor 2 Interleukin-17A Transient receptor potential cation channel subfamily V member 6 Lysophosphatidic acid receptor 1 cAMP-specific 3',5'-cyclic phosphodiesterase 4D Cholecystokinin receptor type A Gamma-aminobutyric acid receptor subunit beta-1 Serine/threonine-protein kinase N1 Steroid hormone receptor ERR1 Interferon-induced, double-stranded RNA-activated protein kinase Gamma-aminobutyric acid receptor subunit gamma-3 Excitatory amino acid transporter 4 Gamma-aminobutyric acid receptor subunit theta Receptor tyrosine-protein kinase erbB-4 Transient receptor potential cation channel subfamily M member 6 Gap junction alpha-8 protein Vasoactive intestinal polypeptide receptor 1 Gap junction alpha-10 protein Gap junction alpha-5 protein Phospholipase D2 Serine/threonine-protein kinase 3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A Cytochrome P450 1B1 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C Cyclin-G-associated kinase Free fatty acid receptor 2 G protein-coupled receptor kinase 6 Bromodomain-containing protein 3 Nuclear receptor subfamily 1 group D member 1 Sphingosine 1-phosphate receptor 5 cGMP-gated cation channel alpha-1 Sphingosine 1-phosphate receptor 5 Excitatory amino acid transporter 1 N-formyl peptide receptor 2 B2 bradykinin receptor Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B Metabotropic glutamate receptor 8 B1 bradykinin receptor Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Potassium voltage-gated channel subfamily A member 2 Sphingosine 1-phosphate receptor 2 Sphingosine 1-phosphate receptor 1 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Interstitial collagenase Short transient receptor potential channel 6 Oxoeicosanoid receptor 1 Voltage-dependent L-type calcium channel subunit alpha-1S Short transient receptor potential channel 4 Sphingosine 1-phosphate receptor 2 Probable G-protein coupled receptor 63 Mitogen-activated protein kinase 8 Histone acetyltransferase KAT2B Neuropeptide FF receptor 2 Prostaglandin F2-alpha receptor P2Y purinoceptor 6 Fatty-acid amide hydrolase 1 cAMP-dependent protein kinase catalytic subunit alpha Fatty-acid amide hydrolase 2 Gap junction beta-1 protein Mitogen-activated protein kinase 9 Platelet-activating factor receptor Aquaporin-1 Solute carrier family 15 member 1 Beta-adrenergic receptor kinase 1 Calcium/calmodulin-dependent protein kinase type II subunit beta Serine/threonine-protein kinase pim-2 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Serine palmitoyltransferase 2 Leukotriene B4 receptor 2 Nitric oxide synthase, brain Inhibitor of nuclear factor kappa-B kinase subunit alpha Serine/threonine-protein kinase N2 Cathepsin K Type-2 angiotensin II receptor Presenilin-1 Aurora kinase A Cyclin-dependent-like kinase 5 Casein kinase I isoform delta Lysine-specific demethylase 2A Histamine H3 receptor Neuropeptide Y receptor type 2 Mucolipin-1 Potassium channel subfamily K member 3 Leukotriene B4 receptor 1 Pannexin-3 Casein kinase I isoform epsilon TRAF2 and NCK-interacting protein kinase Cathepsin Z Growth hormone secretagogue receptor type 1 cAMP-dependent protein kinase catalytic subunit beta Serine palmitoyltransferase 1 Glucocorticoid receptor Gamma-aminobutyric acid receptor subunit gamma-2 G protein-activated inward rectifier potassium channel 4 Gap junction beta-7 protein Gap junction gamma-2 protein Gap junction alpha-9 protein Platelet-activating factor acetylhydrolase Serum amyloid P-component Neurotensin receptor type 2 Protein kinase C eta type Bromodomain-containing protein 2 Serine/threonine-protein kinase pim-1 G protein-coupled receptor kinase 4 Aquaporin-9 Neuromedin-K receptor Melanocortin receptor 4 Melanocortin receptor 5 Glutamate receptor ionotropic, kainate 1 Apoptosis regulator Bcl-2 Tyrosine-protein kinase Lck Sodium/myo-inositol cotransporter 2 Oxysterols receptor LXR-alpha Cystathionine gamma-lyase Transient receptor potential cation channel subfamily M member 1 Gap junction beta-3 protein GTPase NRas Gamma-aminobutyric acid receptor subunit pi Gamma-aminobutyric acid receptor subunit delta Gamma-aminobutyric acid receptor subunit rho-3 Inositol 1,4,5-trisphosphate receptor type 2 Metabotropic glutamate receptor 4 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor Histamine H3 receptor Metabotropic glutamate receptor 1 Potassium voltage-gated channel subfamily A member 6 Metabotropic glutamate receptor 5 Tyrosine-protein kinase Yes Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 3-phosphoinositide-dependent protein kinase 1 Cystathionine beta-synthase Dopamine beta-hydroxylase Mitogen-activated protein kinase 14 Tubulin beta-3 chain Inhibitor of nuclear factor kappa-B kinase subunit beta Metabotropic glutamate receptor 5 Lanosterol 14-alpha demethylase High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Histone lysine demethylase PHF8 Neuropeptide FF receptor 1 Sphingosine 1-phosphate receptor 3 Gap junction alpha-1 protein Purine nucleoside phosphorylase Gap junction beta-2 protein Neurotensin receptor type 2
Min number of nutrients or drugs interact with Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1 and Glycogen synthase kinase-3 beta
Apoptosis regulator Bcl-2 NAD-dependent protein deacetylase sirtuin-1 Glycogen synthase kinase-3 beta
action argmin
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( MIN ( ?z ) AS ?y ) { SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) ?k WHERE { { ?q rdf:type ontology:nutrient . ?k rdf:type ontology:nutrient . ?q property:physically_interacts_with ?k } UNION { ?q rdf:type ontology:drug . ?k rdf:type ontology:nutrient . ?q property:physically_interacts_with ?k } } GROUP BY ?k } } . { SELECT DISTINCT ( COUNT ( ?a ) AS ?v ) ?o WHERE { { ?o rdf:type ontology:nutrient . ?a rdf:type ontology:drug . ?a property:physically_interacts_with ?o } UNION { ?a property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient . ?a rdf:type ontology:nutrient } } GROUP BY ?o } . FILTER ( ?v = ?y ) }
[]
Clarification
Comparative|More/Less|Single entity type|Indirect
P129
Q181394 Q181394
USER
Which nutrients do greater number of nutrients interact with than that nutrient ?
(c(Q181394),P129,c(Q181394))
[{'concept': 'Q181394'}, 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?z WHERE { ?z property:P129 ?z . ?z rdf:type ontology:Q181394 }
[{'concept': 'nutrient'}, 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?z WHERE { ?z property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient }
[]
nutrient nutrient
Comparative|More/Less|Single entity type|Clarification
Q425201
SYSTEM
Did you mean Apoptosis regulator Bcl-2 ?
(c(Q181394),P129,c(Q181394))
[ANSWER]
[{'concept': 'Q181394'}, 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?z WHERE { ?z property:P129 ?z . ?z rdf:type ontology:Q181394 }
Did you mean Apoptosis regulator Bcl-2 ?
Apoptosis regulator Bcl-2
[{'concept': 'nutrient'}, 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?z WHERE { ?z property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient }
[]
Comparative Reasoning (All)
USER
No, I meant Glycogen synthase kinase-3 beta. Could you tell me the answer for that?
(c(Q181394),P129,c(Q181394))
Q5514576
[{'concept': 'Q181394'}, 'P129', {'concept': 'Q181394'}]
[{'concept': 'nutrient'}, 'physically interacts with', {'concept': 'nutrient'}]
[]
Q423510 Q315860 Q1979313
SYSTEM
Amyloid beta A4 protein, Calcitonin, Very low-density lipoprotein receptor
Q423510 Q3931282 Q315860 Q1979313
(c(Q181394),P129,c(Q181394))
Greater number of nutrients interact with the [ANSWERS] than that nutrient
[{'concept': 'Q181394'}, 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?z WHERE { ?z property:P129 ?z . ?z rdf:type ontology:Q181394 }
Amyloid beta A4 protein Calcitonin receptor Calcitonin Very low-density lipoprotein receptor
Greater number of nutrients interact with the Amyloid beta A4 protein, Calcitonin and Very low-density lipoprotein receptor than that nutrient
Amyloid beta A4 protein Calcitonin Very low-density lipoprotein receptor
[{'concept': 'nutrient'}, 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?z WHERE { ?z property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient }
[]
Clarification
Comparative|Count over More/Less|Single entity type|Indirect
P129
Q181394 Q181394
USER
How many nutrients do more number of nutrients interact with than that nutrient ?
(c(Q181394),P129,c(Q181394))
[{'concept': 'Q181394'}, 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { ?z property:P129 ?z . ?z rdf:type ontology:Q181394 }
[{'concept': 'nutrient'}, 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { ?z property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient }
[]
nutrient nutrient
Comparative|Count over More/Less|Single entity type|Clarification
Q423510
SYSTEM
Did you mean Amyloid beta A4 protein ?
(c(Q181394),P129,c(Q181394))
[ANSWER]
[{'concept': 'Q181394'}, 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { ?z property:P129 ?z . ?z rdf:type ontology:Q181394 }
Did you mean Amyloid beta A4 protein ?
Amyloid beta A4 protein
[{'concept': 'nutrient'}, 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { ?z property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient }
[]
Comparative Reasoning (Count) (All)
USER
No, I meant Very low-density lipoprotein receptor. Could you tell me the answer for that?
(c(Q181394),P129,c(Q181394))
Q1979313
[{'concept': 'Q181394'}, 'P129', {'concept': 'Q181394'}]
[{'concept': 'nutrient'}, 'physically interacts with', {'concept': 'nutrient'}]
[]
SYSTEM
0
(c(Q181394),P129,c(Q181394))
[ANSWER]
[{'concept': 'Q181394'}, 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { ?z property:P129 ?z . ?z rdf:type ontology:Q181394 }
0
[{'concept': 'nutrient'}, 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { ?z property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q425201
P681
Q5058355
USER
How many cellular components are the components of Apoptosis regulator Bcl-2 ?
(Q425201,P681,c(Q5058355))
action count
action filter_type
action find
entity Q425201
relation P681
type Q5058355
['Q425201', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?x ) WHERE { resource:Q425201 property:P681 ?h . ?h rdf:type ontology:Q5058355 }
Apoptosis regulator Bcl-2
action count
action filter_type
action find
entity Apoptosis regulator Bcl-2
relation cell component
type cellular component
['Apoptosis regulator Bcl-2', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?x ) WHERE { resource:Apoptosis_regulator_Bcl-2 property:cell_component ?h . ?h rdf:type ontology:cellular_component }
[]
cellular component
SYSTEM
4
Q14329032 Q79927 Q14863372 Q3824358
(Q425201,P681,c(Q5058355))
action count
action filter_type
action find
entity Q425201
relation P681
type Q5058355
[ANSWER]
['Q425201', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?x ) WHERE { resource:Q425201 property:P681 ?h . ?h rdf:type ontology:Q5058355 }
endoplasmic reticulum membrane endoplasmic reticulum myelin sheath intracellular
4
action count
action filter_type
action find
entity Apoptosis regulator Bcl-2
relation cell component
type cellular component
['Apoptosis regulator Bcl-2', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?x ) WHERE { resource:Apoptosis_regulator_Bcl-2 property:cell_component ?h . ?h rdf:type ontology:cellular_component }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q21132110
P681
Q5058355
USER
And also tell me about Activity-regulated cytoskeleton-associated protein?
(Q21132110,P681,c(Q5058355))
action count
action filter_type
action find
entity Q21132110
relation P681
type Q5058355
['Q21132110', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?c ) WHERE { resource:Q21132110 property:P681 ?e . ?e rdf:type ontology:Q5058355 }
Activity-regulated cytoskeleton-associated protein
action count
action filter_type
action find
entity Activity-regulated cytoskeleton-associated protein
relation cell component
type cellular component
['Activity-regulated cytoskeleton-associated protein', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?c ) WHERE { resource:Activity-regulated_cytoskeleton-associated_protein property:cell_component ?e . ?e rdf:type ontology:cellular_component }
[]
cellular component
SYSTEM
2
Q29548 Q14353100
(Q21132110,P681,c(Q5058355))
action count
action filter_type
action find
entity Q21132110
relation P681
type Q5058355
[ANSWER]
['Q21132110', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?c ) WHERE { resource:Q21132110 property:P681 ?e . ?e rdf:type ontology:Q5058355 }
plasma membrane cell projection
2
action count
action filter_type
action find
entity Activity-regulated cytoskeleton-associated protein
relation cell component
type cellular component
['Activity-regulated cytoskeleton-associated protein', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?c ) WHERE { resource:Activity-regulated_cytoskeleton-associated_protein property:cell_component ?e . ?e rdf:type ontology:cellular_component }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q23516424
Q5058355
USER
And also tell me about ATP-dependent DNA helicase RecQ    BSU19220?
(Q23516424,P681,c(Q5058355))
action count
action filter_type
action find
entity Q23516424
relation P681
type Q5058355
['Q23516424', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?z ) WHERE { resource:Q23516424 property:P681 ?h . ?h rdf:type ontology:Q5058355 }
ATP-dependent DNA helicase RecQ    BSU19220
action count
action filter_type
action find
entity ATP-dependent DNA helicase RecQ    BSU19220
relation cell component
type cellular component
['ATP-dependent DNA helicase RecQ    BSU19220', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?z ) WHERE { resource:ATP-dependent_DNA_helicase_RecQ____BSU19220 property:cell_component ?h . ?h rdf:type ontology:cellular_component }
[]
cellular component
SYSTEM
2
(Q23516424,P681,c(Q5058355))
action count
action filter_type
action find
entity Q23516424
relation P681
type Q5058355
[ANSWER]
['Q23516424', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?z ) WHERE { resource:Q23516424 property:P681 ?h . ?h rdf:type ontology:Q5058355 }
2
action count
action filter_type
action find
entity ATP-dependent DNA helicase RecQ    BSU19220
relation cell component
type cellular component
['ATP-dependent DNA helicase RecQ    BSU19220', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?z ) WHERE { resource:ATP-dependent_DNA_helicase_RecQ____BSU19220 property:cell_component ?h . ?h rdf:type ontology:cellular_component }
[]