Simple Question (Direct)
Simple Question
Q27552527
P703
Q631147
USER
Which taxon is Sps2p YDR522C a part of ?
(Q27552527,P703,c(Q631147))
action filter_type
action find
entity Q27552527
relation P703
type Q631147
['Q27552527', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?f WHERE { resource:Q27552527 property:P703 ?f . ?f rdf:type ontology:Q631147 }
Sps2p YDR522C
action filter_type
action find
entity Sps2p YDR522C
relation found in taxon
type infraspecific name
['Sps2p YDR522C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?f WHERE { resource:Sps2p_YDR522C property:found_in_taxon ?f . ?f rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27552527,P703,c(Q631147))
action filter_type
action find
entity Q27552527
relation P703
type Q631147
[ANSWER] is Sps2p YDR522C a part of
['Q27552527', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?f WHERE { resource:Q27552527 property:P703 ?f . ?f rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c is Sps2p YDR522C a part of
Saccharomyces cerevisiae S288c
action filter_type
action find
entity Sps2p YDR522C
relation found in taxon
type infraspecific name
['Sps2p YDR522C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?f WHERE { resource:Sps2p_YDR522C property:found_in_taxon ?f . ?f rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27552527
P681
Q20011319
USER
What is a component of Sps2p YDR522C ?
(Q27552527,P681,c(Q20011319))
action filter_type
action find
entity Q27552527
relation P681
type Q20011319
['Q27552527', 'P681', {'concept': 'Q20011319'}]
SELECT DISTINCT ?a WHERE { resource:Q27552527 property:P681 ?a . ?a rdf:type ontology:Q20011319 }
Sps2p YDR522C
action filter_type
action find
entity Sps2p YDR522C
relation cell component
type part of a plant
['Sps2p YDR522C', 'cell component', {'concept': 'part of a plant'}]
SELECT DISTINCT ?a WHERE { resource:Sps2p_YDR522C property:cell_component ?a . ?a rdf:type ontology:part_of_a_plant }
[]
part of a plant
Q22328088
SYSTEM
fungal-type cell wall
Q22328088
(Q27552527,P681,c(Q20011319))
action filter_type
action find
entity Q27552527
relation P681
type Q20011319
A component of Sps2p YDR522C is a [ANSWER]
['Q27552527', 'P681', {'concept': 'Q20011319'}]
SELECT DISTINCT ?a WHERE { resource:Q27552527 property:P681 ?a . ?a rdf:type ontology:Q20011319 }
fungal-type cell wall
A component of Sps2p YDR522C is a fungal-type cell wall
fungal-type cell wall
action filter_type
action find
entity Sps2p YDR522C
relation cell component
type part of a plant
['Sps2p YDR522C', 'cell component', {'concept': 'part of a plant'}]
SELECT DISTINCT ?a WHERE { resource:Sps2p_YDR522C property:cell_component ?a . ?a rdf:type ontology:part_of_a_plant }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21112089
Q20011319
USER
And how about Programmed cell death protein 6?
(Q21112089,P681,c(Q20011319))
action filter_type
action find
entity Q21112089
relation P681
type Q20011319
['Q21112089', 'P681', {'concept': 'Q20011319'}]
SELECT DISTINCT ?k WHERE { resource:Q21112089 property:P681 ?k . ?k rdf:type ontology:Q20011319 }
Programmed cell death protein 6
action filter_type
action find
entity Programmed cell death protein 6
relation cell component
type part of a plant
['Programmed cell death protein 6', 'cell component', {'concept': 'part of a plant'}]
SELECT DISTINCT ?k WHERE { resource:Programmed_cell_death_protein_6 property:cell_component ?k . ?k rdf:type ontology:part_of_a_plant }
[]
part of a plant
Q824237
SYSTEM
endosome
Q824237
(Q21112089,P681,c(Q20011319))
action filter_type
action find
entity Q21112089
relation P681
type Q20011319
[ANSWER]
['Q21112089', 'P681', {'concept': 'Q20011319'}]
SELECT DISTINCT ?k WHERE { resource:Q21112089 property:P681 ?k . ?k rdf:type ontology:Q20011319 }
endosome
endosome
action filter_type
action find
entity Programmed cell death protein 6
relation cell component
type part of a plant
['Programmed cell death protein 6', 'cell component', {'concept': 'part of a plant'}]
SELECT DISTINCT ?k WHERE { resource:Programmed_cell_death_protein_6 property:cell_component ?k . ?k rdf:type ontology:part_of_a_plant }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21112089
P680
Q44424
USER
Which chemical bonds represent molecular function of that nutrient ?
(Q824237,P680,c(Q44424))
action filter_type
action find
entity Q21112089
relation P680
type Q44424
['Q824237', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?q WHERE { resource:Q21112089 property:P680 ?q . ?q rdf:type ontology:Q44424 }
Programmed cell death protein 6
action filter_type
action find
entity Programmed cell death protein 6
relation molecular function
type chemical bond
['endosome', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?q WHERE { resource:Programmed_cell_death_protein_6 property:molecular_function ?q . ?q rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380 Q14633862
SYSTEM
metal ion binding, calcium ion binding
Q13667380 Q14633862
(Q824237,P680,c(Q44424))
action filter_type
action find
entity Q21112089
relation P680
type Q44424
[ANSWERS] represent molecular function of that nutrient
['Q824237', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?q WHERE { resource:Q21112089 property:P680 ?q . ?q rdf:type ontology:Q44424 }
metal ion binding calcium ion binding
Metal ion binding and calcium ion binding represent molecular function of that nutrient
metal ion binding calcium ion binding
action filter_type
action find
entity Programmed cell death protein 6
relation molecular function
type chemical bond
['endosome', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?q WHERE { resource:Programmed_cell_death_protein_6 property:molecular_function ?q . ?q rdf:type ontology:chemical_bond }
[]
Logical Reasoning (All)
Logical|Difference|Single_Relation
Q14327652 Q824237
P681
Q181394
USER
Which nutrients are endosome but not integral component of membrane a cell component of ?
AND((c(Q181394),P681,Q824237), NOT((c(Q181394),P681,Q14327652)))
action filter_type
action difference
action find_reverse
entity Q824237
relation P681
action find_reverse
entity Q14327652
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P681', 'Q824237'], {'NOT': [[{'concept': 'Q181394'}, 'P681', 'Q14327652']]}]}
SELECT DISTINCT ?i WHERE { MINUS { ?i property:P681 resource:Q14327652 } . ?i property:P681 resource:Q824237 . ?i rdf:type ontology:Q181394 }
integral component of membrane endosome
action filter_type
action difference
action find_reverse
entity endosome
relation cell component
action find_reverse
entity integral component of membrane
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'cell component', 'endosome'], {'NOT': [[{'concept': 'nutrient'}, 'cell component', 'integral component of membrane']]}]}
SELECT DISTINCT ?i WHERE { MINUS { ?i property:cell_component resource:integral_component_of_membrane } . ?i property:cell_component resource:endosome . ?i rdf:type ontology:nutrient }
[]
nutrient
Q21123090 Q21112661 Q21117784 Q21110119 Q21114834 Q21986574 Q21108063 Q21989255 Q21123521 Q23572322
SYSTEM
Some of them are Ras-related protein Rab-9A, Angiomotin-like protein 2, Ragulator complex protein LAMTOR1, Src-like-adapter, Kinesin-like protein KIFC1, Unconventional myosin-Id, Ras-related protein Rab-3A, Ubiquitin-conjugating enzyme E2 D3, Thymus-specific serine protease, hypothetical protein    gll3145
Q21122949 Q21122948 Q21419801 Q27548375 Q21096444 Q21122943 Q21122944 Q21992568 Q21116502 Q21989438 Q21108383 Q21105617 Q21117672 Q21119910 Q27553070 Q21497972 Q21983111 Q21990946 Q21990004 Q21986067 Q21499037 Q7187516 Q21123831 Q27551446 Q21496235 Q27552099 Q21112544 Q21985441 Q21985192 Q21111457 Q21111598 Q21111450 Q21111353 Q21140280 Q21115774 Q21982605 Q21133283 Q21992443 Q21115284 Q21109035 Q27552557 Q21991662 Q27549577 Q21130658 Q409961 Q27549709 Q21106115 Q4653665 Q21990436 Q14908058 Q21106059 Q21982866 Q21125453 Q21118014 Q21985296 Q21986404 Q14911733 Q21985292 Q21985293 Q21986400 Q21984912 Q21498119 Q21133277 Q21133276 Q21992216 Q21133273 Q27549203 Q21980161 Q7098997 Q21109796 Q21135669 Q21119763 Q21109710 Q21121742 Q21498376 Q21110312 Q21125180 Q21125181 Q21988701 Q27552821 Q21979991 Q21110086 Q21115766 Q21109416 Q21120909 Q21172695 Q21139802 Q21201756 Q27550601 Q21136597 Q21124354 Q27547499 Q14911825 Q21991985 Q21991984 Q21991983 Q21113001 Q27547874 Q27548233 Q21120513 Q919787 Q21495934 Q21990175 Q4037784 Q21986858 Q21133655 Q906403 Q21109784 Q21982958 Q21992659 Q27552609 Q21988559 Q21986855 Q21989978 Q21989973 Q21989976 Q21989975 Q21988007 Q22677765 Q7276719 Q27552196 Q4162121 Q21105275 Q21130081 Q21135332 Q21125471 Q21136604 Q21992001 Q21494979 Q14908237 Q21110425 Q14860563 Q27552042 Q27552288 Q27552126 Q27552283 Q22679257 Q21498125 Q21106096 Q21136430 Q21136431 Q21110137 Q21097357 Q27551352 Q21483184 Q21117902 Q21982735 Q21104721 Q21120309 Q21136281 Q21130010 Q27551412 Q7865201 Q21104809 Q21113214 Q27551357 Q21992253 Q21980049 Q21109043 Q21097452 Q21121782 Q21991277 Q21496724 Q27548597 Q21108801 Q21110043 Q27552906 Q21496290 Q21988185 Q21108063 Q21123188 Q21987976 Q21982854 Q21110277 Q21986574 Q21987077 Q21499330 Q21122746 Q21984254 Q27547188 Q21986873 Q21986717 Q21112089 Q27550435 Q21116313 Q21982291 Q21990021 Q21119042 Q21130482 Q22676913 Q21100937 Q21496129 Q27550154 Q21135097 Q21985878 Q21987809 Q21173526 Q21495259 Q21991491 Q21987802 Q21143401 Q21125236 Q27551988 Q21986376 Q21125235 Q21114834 Q21125233 Q21114836 Q21986373 Q21986275 Q27549647 Q27548269 Q21106139 Q21120525 Q21118249 Q21991125 Q21122957 Q21112661 Q21992454 Q21116543 Q21105620 Q21116267 Q27552493 Q21497137 Q21125670 Q21990836 Q21990831 Q21986091 Q21112223 Q21123807 Q21991159 Q21990018 Q21987154 Q21990017 Q21990015 Q21115688 Q21990938 Q21990501 Q21097465 Q21123090 Q21136578 Q21149776 Q21106590 Q21123657 Q21981475 Q21981473 Q21981471 Q21495041 Q21106527 Q21980004 Q21986892 Q21980002 Q21980003 Q21104798 Q21992587 Q21202979 Q21119914 Q21496827 Q27549567 Q21990847 Q21983819 Q21987301 Q21113817 Q21497269 Q21102584 Q21113819 Q21988624 Q21134024 Q21982954 Q21123577 Q21982814 Q21982811 Q21123572 Q27549897 Q27547410 Q21174988 Q21992225 Q21109253 Q21494445 Q21121212 Q21495251 Q21496168 Q21991347 Q21117444 Q27552519 Q21984336 Q21103189 Q21499040 Q21171114 Q21988712 Q21115450 Q21114879 Q21121586 Q21124363 Q21118733 Q21245851 Q21159922 Q22679669 Q21991697 Q21991696 Q21990064 Q21991693 Q21991163 Q21112747 Q27550836 Q21499026 Q21120079 Q27550835 Q21988562 Q21115878 Q21986291 Q21987970 Q21126890 Q21979934 Q21989968 Q21125247 Q21989965 Q21989966 Q21125241 Q27548987 Q27551156 Q7276721 Q27549690 Q21101608 Q21106497 Q21105206 Q23572322 Q21122212 Q21117653 Q2851537 Q23064428 Q21110434 Q21122859 Q21982864 Q21986364 Q27552051 Q14908226 Q27550093 Q21990537 Q21115274 Q21130580 Q21106463 Q21104691 Q21110142 Q21983133 Q21496210 Q21497342 Q21114033 Q21497344 Q21497345 Q21097347 Q22680289 Q21101289 Q21495949 Q21102265 Q21495945 Q21102269 Q21423162 Q21986778 Q7072378 Q21981402 Q21497299 Q21983290 Q21990953 Q21428378 Q14911544 Q21984253 Q21990241 Q21125020 Q21985295 Q21496049 Q21113020 Q21494236 Q21496731 Q22676738 Q21986870 Q4769148 Q21987887 Q21111503 Q21111505 Q21102009 Q21112525 Q27551270 Q21987963 Q27551275 Q21986544 Q27551570 Q21418961 Q14905190 Q21102398 Q21433440 Q27549778 Q21433531 Q27549777 Q21105452 Q21106974 Q21986864 Q21986866 Q21986867 Q21986860 Q21986861 Q21986863 Q27551290 Q21112096 Q21116300 Q21113658 Q21103289 Q21984066 Q21985688 Q21134458 Q21498450 Q21116711 Q27552653 Q21984346 Q21984345 Q21988440 Q21984341 Q21130552 Q27551759 Q21443044 Q21132074 Q7391921 Q21114928 Q21499190 Q21106102 Q21106104 Q21106459 Q27551126 Q21122965 Q27548254 Q21115273 Q21992716 Q21991489 Q21172728 Q21990659 Q21499172 Q21984116 Q21984114 Q27549981 Q21990023 Q21123816 Q21990020 Q21123812 Q27548708 Q21137019 Q21109992 Q21496886 Q27549819 Q21127354 Q21122718 Q21125246 Q21122712 Q21989255 Q417782 Q21108378 Q21980052 Q21136243 Q21982149 Q21495373 Q21130577 Q21115787 Q21495375 Q21495374 Q21496776 Q27549729 Q21130574 Q21496779 Q511968 Q21149613 Q21106772 Q21106773 Q21984093 Q27548923 Q21988094 Q21172719 Q21109025 Q21122402 Q21172711 Q21173595 Q21172715 Q21992726 Q21992724 Q21992725 Q21992722 Q21992723 Q21992720 Q21992721 Q21980060 Q21493985 Q21992728 Q21986371 Q21986372 Q21113507 Q21102680 Q21992801 Q27553166 Q21992806 Q21159249 Q21108392 Q21110701 Q21991691 Q21127302 Q21108643 Q21497971 Q21981183 Q22679718 Q21495531 Q27550982 Q21245960 Q21126904 Q5009962 Q21984784 Q21499318 Q21126744 Q21991342 Q21126906 Q21135386 Q21986859 Q21990174 Q21990177 Q21990176 Q21117220 Q21986779 Q21986857 Q21135227 Q21989685 Q27547590 Q8072290 Q21127375 Q21111728 Q21131853 Q21172873 Q21990858 Q21121487 Q7670154 Q21125252 Q21989998 Q21495252 Q15322151 Q21109415 Q21990314 Q21982959 Q21106525 Q21134092 Q15313794 Q21121784 Q21096456 Q21105217 Q21120096 Q21106509 Q27547495 Q21124717 Q21136814 Q21991571 Q21991577 Q21991574 Q27547497 Q21114894 Q21992571 Q21992570 Q22677262 Q21498927 Q21991688 Q21127286 Q21096358 Q21123828 Q21106415 Q27548210 Q21991684 Q15331521 Q21125021 Q27547505 Q21113772 Q21497336 Q27549000 Q21097409 Q21110119 Q21136455 Q21497339 Q21123521 Q21135277 Q21109418 Q21991701 Q21991700 Q21115765 Q21991705 Q21990794 Q21991706 Q21112836 Q21987950 Q27548721 Q21418751 Q21119367 Q21115291 Q21498033 Q1142947 Q21987397 Q14865056 Q21108517 Q27552565 Q21126656 Q21113398 Q21983472 Q21987890 Q21134278 Q21493938 Q21987957 Q21109467 Q27551917 Q21120447 Q21125016 Q21433441 Q21981312 Q27551465 Q21992209 Q21126725 Q21135670 Q21135859 Q27550967 Q27551329 Q21116465 Q21113946 Q21498365 Q21987820 Q21986872 Q21495744 Q21495745 Q14859682 Q410153 Q21984751 Q21174413 Q21134025 Q21114507 Q27550020 Q21116564 Q21109094 Q5514416 Q21981879 Q21125656 Q21108866 Q21125652 Q27547898 Q21991943 Q27552140 Q27552637 Q21990939 Q21990910 Q21102748 Q21990013 Q21115542 Q15331171 Q21991972 Q27550028 Q21990136 Q21987232 Q21123821 Q27547260 Q27551143 Q27549534 Q21990263 Q21123671 Q21988065 Q21105896 Q21986377 Q21102686 Q27553114 Q21105268 Q21112280 Q21116840 Q21116961 Q21124980 Q21116968 Q21498433 Q15314490 Q21106563 Q21985720 Q27549750 Q21986639 Q21988644 Q21110143 Q21136427 Q21116285 Q21114133 Q21172723 Q21498543 Q21111414 Q14908021 Q21495141 Q21119450 Q21992719 Q21435894 Q423628 Q27550742 Q21112846 Q21992717 Q21172707 Q27550423 Q21992714 Q21992491 Q21980058 Q27549559 Q21117784 Q27549435 Q21980050 Q21107386 Q21984098 Q21111138 Q21496347 Q21107982 Q21983297 Q21108073 Q21981638 Q27552199 Q21113198 Q21111482 Q27553108 Q21118759 Q21986361 Q21118054 Q21202220 Q21174510 Q27550734 Q21493922 Q21992660 Q21137106 Q21987243 Q21126539 Q21119299 Q21112484 Q21498979 Q21984005 Q21989117 Q21109619 Q21110607 Q21493867 Q21121496 Q21102668 Q21989982 Q27550885 Q21989986 Q21989987 Q21986365 Q21989985 Q21989988 Q21989592 Q21107979 Q21132110
AND((c(Q181394),P681,Q824237), NOT((c(Q181394),P681,Q14327652)))
action filter_type
action difference
action find_reverse
entity Q824237
relation P681
action find_reverse
entity Q14327652
relation P681
type Q181394
[ANSWERS]
{'AND': [[{'concept': 'Q181394'}, 'P681', 'Q824237'], {'NOT': [[{'concept': 'Q181394'}, 'P681', 'Q14327652']]}]}
SELECT DISTINCT ?i WHERE { MINUS { ?i property:P681 resource:Q14327652 } . ?i property:P681 resource:Q824237 . ?i rdf:type ontology:Q181394 }
WD repeat-containing protein 44 WASH complex subunit 7 WASH complex subunit FAM21 Ypt35p YHR105W MICAL-like protein 2 Putative WAS protein family homolog 4 Putative WAS protein family homolog 3 Vacuolar protein sorting-associated protein 37D RAC-beta serine/threonine-protein kinase Ras association domain-containing protein 9 C-type lectin domain family 18 member B STAM-binding protein Pleckstrin homology domain-containing family M member 1 Kinesin-like protein KIF16B retromer subunit VPS17 YOR132W Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 Protein DENND6A Rab15 effector protein Ras-related protein Rap-2a Ras-related protein Rab-21 ADP-ribosylation factor-like protein 8A Phospholipase D1 Sorting nexin-18 ESCRT-III subunit protein SNF7 YLR025W Serine/threonine-protein kinase PAK 3 ESCRT-0 subunit protein VPS27 YNR006W Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 17-beta-hydroxysteroid dehydrogenase type 6 Phosphatidylinositol 4-kinase type 2-alpha MIT domain-containing protein 1 Sorting nexin-5 Vacuolar protein sorting-associated protein 4B Ras-related protein Rab-5A Hepatocyte growth factor-regulated tyrosine kinase substrate Protein diaphanous homolog 2 MICAL-like protein 1 Multivesicular body subunit 12A Transforming growth factor-beta receptor-associated protein 1 Activated CDC42 kinase 1 Rho-related GTP-binding protein RhoV ubiquitin-binding ESCRT-I subunit protein MVB12 YGR206W Vacuolar-sorting protein SNF8 Rcy1p YJL204C Glucosamine 6-phosphate N-acetyltransferase Leucine-rich repeat serine/threonine-protein kinase 2 hypothetical protein YKR078W Ubiquitin carboxyl-terminal hydrolase 10 ADP-ribosylation factor 6 Programmed cell death protein 6 Transforming growth factor beta-2 WASH complex subunit FAM21A Drebrin-like protein Protein tyrosine phosphatase type IVA 2 MICAL-like protein 1 Ras-related protein Rap-2c Rho GTPase-activating protein 32 Cyclin-dependent kinase 2 Ras-related protein Rab-5C Ras-related protein Rab-5A Rho GTPase-activating protein 44 GRIP1-associated protein 1 Clavesin-2 Ragulator complex protein LAMTOR2 Ragulator complex protein LAMTOR3 Protein tyrosine phosphatase type IVA 3 Multivesicular body subunit 12B retromer subunit VPS29 YHR012W RUN and SH3 domain-containing protein 1 Optineurin CAP-Gly domain-containing linker protein 1 Vacuolar protein sorting-associated protein 33B Hermansky-Pudlak syndrome 6 protein Serine/threonine-protein kinase PAK 3 Phosphoinositide 3-kinase regulatory subunit 4 EH domain-containing protein 1 GTPase-activating protein and VPS9 domain-containing protein 1 Sesquipedalian-2 Sesquipedalian-1 Myotubularin-related protein 2 Mon1p YGL124C Sequestosome-1 GRB2-related adapter protein 2 Protein DENND6B Ankyrin repeat domain-containing protein 13B Unconventional myosin-Id Cathepsin E Growth factor receptor-bound protein 14 Ceramide-1-phosphate transfer protein ESCRT-III subunit protein DID4 YKL002W WD repeat-containing protein 48 Ras-related protein Rap-2a Ccz1p YBR131W Inositol polyphosphate 5-phosphatase OCRL-1 Vacuolar protein sorting-associated protein 33A Vacuolar protein sorting-associated protein 37A Vacuolar protein sorting-associated protein 26A COMM domain-containing protein 1 Rab family GTPase YPT31 YER031C phosphoinositide binding protein ATG18 YFR021W Ras association domain-containing protein 9 Interleukin-15 Ragulator complex protein LAMTOR3 Vacuolar protein sorting-associated protein 18 homolog Early endosome antigen 1 Sorting nexin-21 Short coiled-coil protein Protein kinase C zeta type TOM1-like protein 1 EH domain-containing protein 4 V-type proton ATPase subunit d 2 Vps52p YDR484W Sesquipedalian-2 Sorting nexin-12 Ras-related protein Rab-3A Ras-related protein Rab-4A Ras-related protein Rab-1A Ras-related protein Rab-11A RING finger protein 32 Tight junction-associated protein 1 Transforming protein RhoA lipid-binding protein HSP12 YFL014W Dysbindin Arrestin domain-containing protein 3 Ras and Rab interactor 3 Rho GTPase-activating protein 44 Protein tyrosine phosphatase type IVA 1 WD repeat domain phosphoinositide-interacting protein 1 WD repeat-containing protein 48 Coiled-coil domain-containing protein 22 Annexin A2 Rab11 family-interacting protein 4 Serotransferrin Gcs1p YDL226C Bls1p YLR408C Btn2p YGR142W coatomer subunit gamma YNL287W Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 Clavesin-1 WASH complex subunit FAM21C V-type proton ATPase subunit d 2 Vam6/Vps39-like protein EH domain-containing protein 4 Rabankyrin-5 Rab family GTPase YPT32 YGL210W Syndetin Sorting nexin-27 AP-1 complex subunit gamma-like 2 Signal transducing adapter molecule 2 OCIA domain-containing protein 2 Target of Myb protein 1 Proprotein convertase subtilisin/kexin type 9 ubiquitin-binding ESCRT-I subunit protein STP22 YCL008C Protein unc-13 homolog D Rap guanine nucleotide exchange factor 1 Endophilin-A2 retromer subunit PEP8 YJL053W Ubiquitin-associated protein 1 OCIA domain-containing protein 1 Sorting nexin-8 ADP-ribosylation factor-like protein 8A Oxysterol-binding protein-related protein 9 TOM1-like protein 1 Pleckstrin homology domain-containing family F member 1 tethering complex subunit VPS16 YPL045W Rab11 family-interacting protein 5 Down syndrome critical region protein 3 phosphatidylserine decarboxylase 2 YGR170W COMM domain-containing protein 1 Synaptotagmin-like protein 4 Ras-related protein Rab-3A Cytosolic phospholipase A2 beta Rho-related GTP-binding protein RhoV Growth factor receptor-bound protein 14 FK506-binding protein 15 Unconventional myosin-Id Thymus-specific serine protease ADP-ribosylation factor-binding protein GGA1 Phosphatidylinositide phosphatase SAC2 FYVE, RhoGEF and PH domain-containing protein 2 Mvp1p YMR004W Sorting nexin-20 Rap guanine nucleotide exchange factor 2 Programmed cell death protein 6 Ent3p YJR125C Vacuolar protein sorting-associated protein 37C Hepatocyte growth factor-regulated tyrosine kinase substrate Rab11 family-interacting protein 1 17-beta-hydroxysteroid dehydrogenase type 6 Biogenesis of lysosome-related organelles complex 1 subunit 6 Sphingomyelin phosphodiesterase DCC-interacting protein 13-beta BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 retromer subunit VPS35 YJL154C Zinc finger FYVE domain-containing protein 16 RING finger protein 11 Protein kinase C and casein kinase substrate in neurons protein 1 TNF receptor-associated factor 3 Proteasome-associated protein ECM29 homolog Signal transducing adapter molecule 1 Optineurin Charged multivesicular body protein 2a Sorting nexin-32 Vfa1p YER128W Rab5 GDP/GTP exchange factor Sorting nexin-30 Kinesin-like protein KIFC1 Sorting nexin-16 Trafficking kinesin-binding protein 1 Rab GTPase-binding effector protein 2 Zinc finger protein RFP ESCRT-II subunit protein VPS36 YLR417W phosphatidylinositol transporter YNL264C Ras-related protein Rab-4A Protein tyrosine phosphatase type IVA 3 Protein kinase C and casein kinase substrate in neurons protein 1 Serologically defined colon cancer antigen 3 homolog WD repeat and FYVE domain-containing protein 1 Angiomotin-like protein 2 Traf2 and NCK-interacting protein kinase AP-1 complex subunit gamma-like 2 Ubiquitin carboxyl-terminal hydrolase 8 Vacuolar protein sorting-associated protein 52 homolog phosphatidylinositol-3-phosphate-binding ubiquitin-protein ligase YDR313C Biogenesis of lysosome-related organelles complex 1 subunit 6 Vacuolar protein sorting-associated protein 16 homolog Zinc finger FYVE domain-containing protein 21 Zinc finger FYVE domain-containing protein 16 Lethal(2) giant larvae protein homolog 1 DnaJ homolog subfamily C member 13 Sorting nexin-19 Src-like-adapter Rab11 family-interacting protein 3 Kinesin-like protein KIFC1 Rab11 family-interacting protein 4 E3 ubiquitin-protein ligase rififylin Copine-6 Ras-related protein Rab-11B Tyrosine-protein phosphatase non-receptor type 23 ADP-ribosylation factor-like protein 8B Ras-related protein Rab-9A Vacuolar protein sorting-associated protein 26B Charged multivesicular body protein 6 Sequestosome-1 Ras-related protein Rab-10 AP-4 complex subunit mu-1 AP-5 complex subunit sigma-1 AP-5 complex subunit mu-1 Cyclin-dependent kinase inhibitor 1B Sorting nexin-10 Multivesicular body subunit 12A Stathmin-2 TNF receptor-associated factor 3 Multivesicular body subunit 12B Crk-like protein WD repeat domain phosphoinositide-interacting protein 1 Golgi phosphoprotein 3 Kinesin-like protein KIF13A Rab-interacting lysosomal protein Snx3p YOR357C E3 ubiquitin-protein ligase ZNRF2 Ceramide-1-phosphate transfer protein Nischarin Sorting nexin-33 Coiled-coil domain-containing protein 93 Diacylglycerol kinase eta Pleckstrin homology domain-containing family F member 2 TIR domain-containing adapter molecule 2 WAS protein family homolog 2 Run domain Beclin-1-interacting and cysteine-rich domain-containing protein Vacuolar protein sorting-associated protein 4A Charged multivesicular body protein 5 Charged multivesicular body protein 6 Vacuolar protein sorting-associated protein 53 homolog Ent5p YDR153C coatomer subunit epsilon YIL076W Serologically defined colon cancer antigen 3 Tumor susceptibility gene 101 protein Protein kinase C iota type Folate receptor alpha Ras-related protein Rap-2c DCC-interacting protein 13-beta Cathepsin E Ubiquitin carboxyl-terminal hydrolase 10 Cytohesin-interacting protein Snn1p YNL086W Kinesin-like protein KIF16B Glypican-1 ADP-ribosylation factor-like protein 8B Sorting nexin-2 Neutrophil cytosol factor 4 Flotillin-2 Lethal(2) giant larvae protein homolog 1 Pleckstrin homology domain-containing family F member 1 Ras-related protein Rap-1A E3 ubiquitin-protein ligase MGRN1 WAS protein family homolog 1 Transforming growth factor-beta receptor-associated protein 1 Ezrin Sorting nexin-8 Sorting nexin-30 RUN and FYVE domain-containing protein 1 Sorting nexin-32 Src-like-adapter 2 Endophilin-A3 Bro1p YPL084W Activity-regulated cytoskeleton-associated protein Myotubularin-related protein 2 cytoskeletal protein-binding protein SLA1 YBL007C Sesquipedalian-1 Exophilin-5 Phospholipase D1 Rho-related GTP-binding protein RhoD Ras-related protein Rab-7a Copine-6 Ras-related protein Rab-17 Sorting nexin-25 Ras-related protein Rab-22A Ras-related protein Rab-23 Sorting nexin-21 AAA family ATPase VPS4 YPR173C Aps1p YLR170C Rho-related GTP-binding protein RhoB Atg20p YDL113C ADP-ribosylation factor-binding protein GGA3 Zinc finger FYVE domain-containing protein 21 Ankyrin repeat domain-containing protein 27 hypothetical protein    gll3145 Trafficking kinesin-binding protein 2 Vacuolar protein sorting-associated protein 28 homolog Annexin A2 hypothetical protein    LB_070 ADP-ribosylation factor-binding protein GGA1 Tight junction-associated protein 1 Cubilin Ras-related protein Rab-7a Hsv2p YGR223C Annexin A1 sorting nexin 1 YOR069W Rabenosyn-5 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 Charged multivesicular body protein 1a Sorting nexin-4 Rho GTPase-activating protein 32 EH domain-containing protein 3 Protein DENND6B Coiled-coil domain-containing protein 115 Charged multivesicular body protein 4c Tumor susceptibility gene 101 protein Charged multivesicular body protein 4b Charged multivesicular body protein 2a EH domain-containing protein 1 Ras-related protein Rab-43 Sorting nexin-20 Ragulator complex protein LAMTOR2 Coiled-coil domain-containing protein 120 Ragulator complex protein LAMTOR1 Coiled-coil domain-containing protein 115 Down syndrome critical region protein 3 homolog Endophilin-A2 Inositol polyphosphate 5-phosphatase OCRL-1 ADP-ribosylation factor-binding protein GGA3 WASH complex subunit CCDC53 1-phosphatidylinositol 3-phosphate 5-kinase Rho GTPase-activating protein 27 Proteasome-associated protein ECM29 homolog Early endosome antigen 1 FYVE, RhoGEF and PH domain-containing protein 5 TBC1 domain family member 5 Ras-related protein Rab-11B Ras-related protein Rap-2b MICAL-like protein 2 WASH complex subunit CCDC53 Protein CLEC16A Pleckstrin homology domain-containing family F member 2 Myotubularin Sorting nexin-2 Annexin A1 Serine/threonine-protein kinase N1 AP-5 complex subunit mu-1 AP-5 complex subunit sigma-1 Actin-related protein 2/3 complex subunit 2 Serine/threonine-protein kinase N1 Dap1p YPL170W Ras-GEF domain-containing family member 1B Tda3p YHR009C E3 ubiquitin-protein ligase MIB2 Kxd1p YGL079W Cathepsin 7 Growth factor receptor-bound protein 2 Protein C9orf72 Charged multivesicular body protein 1b-1 Vps51p YKR020W Immunity-related GTPase family M protein 1 Rab family GTPase SEC4 YFL005W UV radiation resistance-associated gene protein Protein PML Sorting nexin-16 Sorting nexin-11 Sorting nexin-18 Sorting nexin-19 Sorting nexin-13 Sorting nexin-17 Did2p YKR035W-A Ubiquitin-conjugating enzyme E2 D3 Protein VAC14 homolog Zinc finger protein RFP GRIP1-associated protein 1 Glypican-1 Ras-related protein Rab-5B Ubiquitin-associated protein 1 FK506-binding protein 15 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 Vps53p YJL029C Protein kinase C iota type Protein kinase C zeta type Phosphoinositide 3-kinase regulatory subunit 4 Kinesin-like protein KIF13A High mobility group protein B1 Mon2p YNL297C Protein kinase C and casein kinase II substrate protein 3 RING finger protein 32 Sorting nexin-1 Ras-related protein Rab-27A Baculoviral IAP repeat-containing protein 6 FYVE, RhoGEF and PH domain-containing protein 5 FYVE, RhoGEF and PH domain-containing protein 2 Sorting nexin-3 Rtt10p YPL183C WD repeat and FYVE domain-containing protein 2 Gyp6p YJL044C Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 Vacuolar protein sorting-associated protein 51 homolog Signal transducing adapter molecule 2 Charged multivesicular body protein 3 WASH complex subunit strumpellin Beclin-1 Phosphatidylinositol 3-kinase catalytic subunit type 3 High mobility group protein B1 Vps54p YDR027C Ras and Rab interactor 3 Ras-GEF domain-containing family member 1B Rab11 family-interacting protein 5 Rab11 family-interacting protein 3 Ist1p YNL265C ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E isoform 1 Cytochrome b-245 light chain Rabankyrin-5 ESCRT-II subunit protein VPS25 YJR102C TIR domain-containing adapter molecule 2 Rab-interacting lysosomal protein Vacuolar protein sorting-associated protein 35 Vacuolar protein sorting-associated protein 41 homolog Ubiquitin-conjugating enzyme E2 D3 Beta-nerve growth factor Protein CLEC16A Oxysterol-binding protein-related protein 9 Vacuolar protein sorting-associated protein 8 homolog Golgi phosphoprotein 3 Ankyrin repeat domain-containing protein 13B Tyrosine-protein phosphatase non-receptor type 23 RUN and FYVE domain-containing protein 1 Ankyrin repeat domain-containing protein 13A Ankyrin repeat domain-containing protein 13D Ras-related protein Rab-12 guanine nucleotide-binding protein subunit alpha YHR005C Charged multivesicular body protein 1b Ras-related protein Rab-13 Cyclin-dependent kinase 2 RAB4A, member RAS oncogene family, isoform CRA_b Clavesin-2 Clavesin-1 Arrestin domain-containing protein 4 Dop1p YDR141C SCY1-like protein 2 Charged multivesicular body protein 5 Sorting nexin-17 Vacuolar protein sorting-associated protein 18 homolog Charged multivesicular body protein 4a RING finger protein 11 Charged multivesicular body protein 4b Vacuolar protein sorting-associated protein 28 homolog Vacuolar protein-sorting-associated protein 36 Vacuolar protein-sorting-associated protein 25 Vam6/Vps39-like protein Vacuolar protein sorting-associated protein 4A Vacuolar protein sorting-associated protein 53 homolog Syndetin Oxysterol-binding protein-related protein 1 Myotubularin Vacuolar protein sorting-associated protein 29 Rab9 effector protein with kelch motifs Ras-related protein Rab-7b Ras-related protein Rap-2b Ras-related protein Rab-21 WASH complex subunit 7 ESCRT-I subunit protein SRN2 YLR119W WAS protein family homolog 1 Rab15 effector protein C-type lectin domain family 18 member C Ras-related protein Rab-17 Sorting nexin-6 WASH complex subunit strumpellin 1-phosphatidylinositol 3-phosphate 5-kinase Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 Angiomotin-like protein 2 Protein tyrosine phosphatase type IVA 1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 Age1p YDR524C Rabenosyn-5 Ras-related protein Rab-7b Cyclin-dependent kinase inhibitor 1B Cytochrome b-245 light chain ADP-ribosylation factor-binding protein GGA2 Vacuolar protein sorting-associated protein 37D Tripartite motif-containing protein 3 Rab GTPase-binding effector protein 2 Rho-related GTP-binding protein RhoD Sorting nexin-25 Spermatogenesis-defective protein 39 homolog Vacuolar protein sorting-associated protein 16 homolog Vacuolar protein sorting-associated protein 11 homolog RUN and SH3 domain-containing protein 1 Endophilin-A3 Sorting nexin-27 Ras-related protein Rab-31 V-type proton ATPase subunit E 1 ESCRT-I subunit protein VPS28 YPL065W Zinc finger FYVE domain-containing protein 9 Transcobalamin-2 Baculoviral IAP repeat-containing protein 6 Rab5 GDP/GTP exchange factor Fibroblast growth factor receptor substrate 2 E3 ubiquitin-protein ligase ZNRF1 Serine/threonine-protein kinase Sgk3 Transforming growth factor beta-2 Sorting nexin-13 Ras-related protein Rap-1A DCC-interacting protein 13-alpha Rho-related GTP-binding protein RhoB Ankyrin repeat domain-containing protein 13D WD repeat-containing protein 44 EH domain-containing protein 3 Sorting nexin-11 Nischarin Dysbindin Oxysterol-binding protein-related protein 11 DCC-interacting protein 13-alpha Ankyrin repeat domain-containing protein 50 Neutrophil cytosol factor 4 Maspardin ubiquitin-specific protease DOA4 YDR069C WD repeat-containing protein 72 E3 ubiquitin-protein ligase ZNRF2 Protein VAC14 homolog WD repeat and FYVE domain-containing protein 2 WD repeat and FYVE domain-containing protein 1 phosphatidylinositol 3-kinase VPS34 YLR240W Ras-related protein Rab-13 Vacuolar protein sorting-associated protein 37C Vacuolar protein sorting-associated protein 37B Charged multivesicular body protein 3 RAC-beta serine/threonine-protein kinase Sorting nexin-33 Stathmin-2 Coiled-coil domain-containing protein 22 E3 ubiquitin-protein ligase rififylin TBC1 domain family member 5 beclin 1 YPL120W Sorting nexin-3 Transforming protein RhoA Rab11 family-interacting protein 2 ESCRT-III subunit protein VPS24 YKL041W Protein kinase C and casein kinase substrate in neurons protein 3 Charged multivesicular body protein 2b ubiquitin-binding serine/threonine protein kinase VPS15 YBR097W Beclin-1 Src-like-adapter Ubiquitin carboxyl-terminal hydrolase 6 Charged multivesicular body protein 1a Thymus-specific serine protease Ras-related protein Rab-23 Ankyrin repeat domain-containing protein 13A Sorting nexin-4 Sorting nexin-9 Protein DENND6A Sorting nexin-7 Vacuolar protein sorting-associated protein VTA1 homolog Sorting nexin-5 Phosphatidylinositol 3-kinase catalytic subunit type 3 Ras-related protein Rab-27A Vps38p YLR360W GRB2-related adaptor protein 2 Lateral signaling target protein 2 homolog Sorting nexin-9 Coiled-coil domain-containing protein 154 Cubilin Perilipin-3 ADP-ribosylation factor 6 TRAF2 and NCK-interacting protein kinase Atg21p YPL100W Vacuolar protein sorting-associated protein 37A Sorting nexin-7 Sphingomyelin phosphodiesterase Pleckstrin homology domain-containing family M member 1 Raftlin Brefeldin A-inhibited guanine nucleotide-exchange protein 2 Raftlin AP-1 complex-associated regulatory protein Rab family GTPase VPS21 YOR089C Run domain Beclin-1-interacting and cysteine-rich domain-containing protein Ras-related protein Rab-11A Charged multivesicular body protein 1b-2 Epidermal growth factor receptor substrate 15 Bli1p YKL061W Protein tyrosine phosphatase type IVA 2 V-type proton ATPase subunit E 1 Spermatogenesis-defective protein 39 homolog E3 ubiquitin-protein ligase ZNRF1 Rav2p YDR202C Pan1p YIR006C Dynamin-2 Coiled-coil domain-containing protein 93 EH domain-containing protein 2 Protein kinase C and casein kinase substrate in neurons protein 2 Sorting nexin-10 Flotillin-1 Flotillin-2 Gastric intrinsic factor Gastric intrinsic factor Tyrosine-protein kinase Fyn Oxysterol-binding protein-related protein 1 WAS protein family homolog 6 Polyphosphoinositide phosphatase 1-phosphatidylinositol-3-phosphate 5-kinase YFR019W Rab GTPase-binding effector protein 1 Ras-related protein Rab-14 Growth factor receptor-bound protein 2 Exophilin-5 Vacuolar protein sorting-associated protein 33A Signal transducing adapter molecule 1 Vacuolar protein-sorting-associated protein 36 Rfu1p YLR073C Ubiquitin carboxyl-terminal hydrolase 8 ESCRT-II subunit protein SNF8 YPL002C Snx4p YJL036W Vacuolar protein sorting-associated protein 33B Protein PML Protein kinase C and casein kinase substrate in neurons protein 2 Rab11 family-interacting protein 2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 Leucine-rich repeat serine/threonine-protein kinase 2 UV radiation resistance associated protein ESCRT-0 subunit protein HSE1 YHL002W Serine/threonine-protein kinase Sgk3 E3 ubiquitin-protein ligase MGRN1 Rab11 family-interacting protein 1 phospholipase D YKR031C Vps60p YDR486C Rho family GTPase RHO1 YPR165W Target of Myb protein 1 Sorting nexin-6 Phosphatidylinositide phosphatase SAC2 Epidermal growth factor receptor substrate 15 Ras-related protein Rab-9A Ras-related protein Rab-22A Ypp1p YGR198W Arrestin domain-containing protein 4 Ras-related protein Rab-5B OCIA domain-containing protein 1 ADP-ribosylation factor-binding protein GGA2 Ras-related protein Rab-12 Coiled-coil domain-containing protein 154 Polyphosphoinositide phosphatase Protein unc-13 homolog D C-type lectin domain family 18 member A MAGE-like protein 2 Csr1p YLR380W Proprotein convertase subtilisin/kexin type 9 Lateral signaling target protein 2 homolog EH domain-containing protein 2 Vacuolar protein sorting-associated protein 26A Vacuolar protein sorting-associated protein 37B Synaptotagmin-like protein 4 Charged multivesicular body protein 2b Glucosamine 6-phosphate N-acetyltransferase Vacuolar-sorting protein SNF8 Sorting nexin-1 Cytohesin-interacting protein Ras-related protein Rab-35 Vacuolar protein sorting-associated protein 52 homolog Hermansky-Pudlak syndrome 6 protein homolog Tyrosine-protein kinase Fyn Vps41p YDR080W Vacuolar protein-sorting-associated protein 25 Vacuolar protein sorting-associated protein 41 homolog Charged multivesicular body protein 4c diphthamide synthase YBR246W Vacuolar protein sorting-associated protein 4B Trafficking kinesin-binding protein 1 Oxysterol-binding protein-related protein 11 End3p YNL084C Ragulator complex protein LAMTOR1 Vta1p YLR181C OCIA domain-containing protein 2 Folate receptor alpha Arrestin domain-containing protein 3 Drebrin-like protein Ezrin Rap guanine nucleotide exchange factor 2 Ras-related protein Rab-10 Ras-related protein Rab-8A Activated CDC42 kinase 1 membrane morphogenesis protein VPS13 YLL040C Ras-related protein Rab-1A AP-4 complex subunit mu-1 ESCRT-III subunit protein VPS20 YMR077C E3 ubiquitin-protein ligase MIB2 Rab GTPase-binding effector protein 1 SCY1-like protein 2 Rab9 effector protein with kelch motifs Tripartite motif-containing protein 3 sphinganine kinase LCB4 YOR171C Actin-related protein 2/3 complex subunit 2 Vacuolar protein sorting-associated protein 26B H.sapiens ras-related Hrab3A protein MIT domain-containing protein 1 Vacuolar protein sorting-associated protein 29 Vacuolar protein sorting-associated protein VTA1 homolog Phosphatidylinositol 4-kinase beta Ankyrin repeat domain-containing protein 27 GTPase-activating protein and VPS9 domain-containing protein 1 Short coiled-coil protein Vacuolar protein sorting-associated protein 11 homolog Perilipin-3 Dynamin-2 Phosphatidylinositol 4-kinase type 2-alpha Ras-related protein Rab-5C Ras-related protein Rab-35 Snx41p YDR425W Ras-related protein Rab-14 Ras-related protein Rab-4B Ras-related protein Rab-8A Ras-related protein Rab-43 Ras-related protein Rab-31 STAM-binding protein MAGE-like protein 2 Activity-regulated cytoskeleton-associated protein
Ras-related protein Rab-9A, Angiomotin-like protein 2, Ragulator complex protein LAMTOR1, Src-like-adapter, Kinesin-like protein KIFC1, Unconventional myosin-Id, Ras-related protein Rab-3A, Ubiquitin-conjugating enzyme E2 D3, Thymus-specific serine protease and hypothetical protein gll3145 are endosome but not integral component of membrane a cell component of
Ras-related protein Rab-9A Angiomotin-like protein 2 Ragulator complex protein LAMTOR1 Src-like-adapter Kinesin-like protein KIFC1 Unconventional myosin-Id Ras-related protein Rab-3A Ubiquitin-conjugating enzyme E2 D3 Thymus-specific serine protease hypothetical protein    gll3145
action filter_type
action difference
action find_reverse
entity endosome
relation cell component
action find_reverse
entity integral component of membrane
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'cell component', 'endosome'], {'NOT': [[{'concept': 'nutrient'}, 'cell component', 'integral component of membrane']]}]}
SELECT DISTINCT ?i WHERE { MINUS { ?i property:cell_component resource:integral_component_of_membrane } . ?i property:cell_component resource:endosome . ?i rdf:type ontology:nutrient }
[]
Clarification
Simple Question|Single Entity|Indirect
Q21989255
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q21989255)
action filter_type
action find_reverse
entity Q21989255
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21989255']
SELECT DISTINCT ?x WHERE { ?x property:P688 resource:Q21989255 . ?x rdf:type ontology:Q863908 }
Ubiquitin-conjugating enzyme E2 D3
action filter_type
action find_reverse
entity Ubiquitin-conjugating enzyme E2 D3
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Ubiquitin-conjugating enzyme E2 D3']
SELECT DISTINCT ?x WHERE { ?x property:encodes resource:Ubiquitin-conjugating_enzyme_E2_D3 . ?x rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Clarification for simple ques.
Q23572322
SYSTEM
Did you mean hypothetical protein    gll3145 ?
Q21123090 Q21112661 Q21117784 Q21110119 Q21114834 Q21986574 Q21108063 Q21989255 Q21123521 Q23572322
(c(Q863908),P688,Q21123090) (c(Q863908),P688,Q21112661) (c(Q863908),P688,Q21117784) (c(Q863908),P688,Q21110119) (c(Q863908),P688,Q21114834) (c(Q863908),P688,Q21986574) (c(Q863908),P688,Q21108063) (c(Q863908),P688,Q21989255) (c(Q863908),P688,Q21123521) (c(Q863908),P688,Q23572322)
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q21123090'] [{'concept': 'Q863908'}, 'P688', 'Q21112661'] [{'concept': 'Q863908'}, 'P688', 'Q21117784'] [{'concept': 'Q863908'}, 'P688', 'Q21110119'] [{'concept': 'Q863908'}, 'P688', 'Q21114834'] [{'concept': 'Q863908'}, 'P688', 'Q21986574'] [{'concept': 'Q863908'}, 'P688', 'Q21108063'] [{'concept': 'Q863908'}, 'P688', 'Q21989255'] [{'concept': 'Q863908'}, 'P688', 'Q21123521'] [{'concept': 'Q863908'}, 'P688', 'Q23572322']
SELECT DISTINCT ?x WHERE { ?x property:P688 resource:Q21989255 . ?x rdf:type ontology:Q863908 }
Ras-related protein Rab-9A Angiomotin-like protein 2 Ragulator complex protein LAMTOR1 Src-like-adapter Kinesin-like protein KIFC1 Unconventional myosin-Id Ras-related protein Rab-3A Ubiquitin-conjugating enzyme E2 D3 Thymus-specific serine protease hypothetical protein    gll3145
Did you mean hypothetical protein    gll3145 ?
hypothetical protein    gll3145
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Ras-related protein Rab-9A'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Angiomotin-like protein 2'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Ragulator complex protein LAMTOR1'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Src-like-adapter'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Kinesin-like protein KIFC1'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Unconventional myosin-Id'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Ras-related protein Rab-3A'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Ubiquitin-conjugating enzyme E2 D3'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Thymus-specific serine protease'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    gll3145']
SELECT DISTINCT ?x WHERE { ?x property:encodes resource:Ubiquitin-conjugating_enzyme_E2_D3 . ?x rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
USER
No, I meant Ubiquitin-conjugating enzyme E2 D3. Could you tell me the answer for that?
(c(Q863908),P688,Q21989255)
Q21989255
[{'concept': 'Q863908'}, 'P688', 'Q21989255']
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Ubiquitin-conjugating enzyme E2 D3']
[]
Q18261580
SYSTEM
Ube2d3
Q18261580
(c(Q863908),P688,Q21989255)
action filter_type
action find_reverse
entity Q21989255
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q21989255']
SELECT DISTINCT ?x WHERE { ?x property:P688 resource:Q21989255 . ?x rdf:type ontology:Q863908 }
Ube2d3
Ube2d3 encodes that nutrient
Ube2d3
action filter_type
action find_reverse
entity Ubiquitin-conjugating enzyme E2 D3
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Ubiquitin-conjugating enzyme E2 D3']
SELECT DISTINCT ?x WHERE { ?x property:encodes resource:Ubiquitin-conjugating_enzyme_E2_D3 . ?x rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q18261580 Q21989255 Q23546783
P688
Q181394
USER
Does Ube2d3 encode Ubiquitin-conjugating enzyme E2 D3 and hypothetical protein    BMAA1346 ?
(Q18261580,P688,Q21989255) (Q18261580,P688,Q23546783)
action is_in
entity Q18261580
action intersection
action find_reverse
entity Q21989255
relation P688
action find_reverse
entity Q23546783
relation P688
['Q18261580', 'P688', 'Q21989255'] ['Q18261580', 'P688', 'Q23546783']
ASK WHERE { resource:Q18261580 property:P688 resource:Q21989255 . resource:Q18261580 property:P688 resource:Q23546783 }
Ube2d3 Ubiquitin-conjugating enzyme E2 D3 hypothetical protein    BMAA1346
action is_in
entity Ube2d3
action intersection
action find_reverse
entity Ubiquitin-conjugating enzyme E2 D3
relation encodes
action find_reverse
entity hypothetical protein    BMAA1346
relation encodes
['Ube2d3', 'encodes', 'Ubiquitin-conjugating enzyme E2 D3'] ['Ube2d3', 'encodes', 'hypothetical protein    BMAA1346']
ASK WHERE { resource:Ube2d3 property:encodes resource:Ubiquitin-conjugating_enzyme_E2_D3 . resource:Ube2d3 property:encodes resource:hypothetical_protein____BMAA1346 }
[]
nutrient
SYSTEM
YES and NO respectively
(Q18261580,P688,Q21989255) (Q18261580,P688,Q23546783)
action is_in
entity Q18261580
action intersection
action find_reverse
entity Q21989255
relation P688
action find_reverse
entity Q23546783
relation P688
[ANSWER]
['Q18261580', 'P688', 'Q21989255'] ['Q18261580', 'P688', 'Q23546783']
ASK WHERE { resource:Q18261580 property:P688 resource:Q21989255 . resource:Q18261580 property:P688 resource:Q23546783 }
YES and NO respectively
action is_in
entity Ube2d3
action intersection
action find_reverse
entity Ubiquitin-conjugating enzyme E2 D3
relation encodes
action find_reverse
entity hypothetical protein    BMAA1346
relation encodes
['Ube2d3', 'encodes', 'Ubiquitin-conjugating enzyme E2 D3'] ['Ube2d3', 'encodes', 'hypothetical protein    BMAA1346']
ASK WHERE { resource:Ube2d3 property:encodes resource:Ubiquitin-conjugating_enzyme_E2_D3 . resource:Ube2d3 property:encodes resource:hypothetical_protein____BMAA1346 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18261580
P684
Q863908
USER
Which nucleic acid sequence is an orthologous gene for Ube2d3 ?
(Q18261580,P684,c(Q863908))
action filter_type
action find
entity Q18261580
relation P684
type Q863908
['Q18261580', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?b WHERE { resource:Q18261580 property:P684 ?b . ?b rdf:type ontology:Q863908 }
Ube2d3
action filter_type
action find
entity Ube2d3
relation ortholog
type nucleic acid sequence
['Ube2d3', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?b WHERE { resource:Ube2d3 property:ortholog ?b . ?b rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q24419454
SYSTEM
Ube2d3
Q24419454
(Q18261580,P684,c(Q863908))
action filter_type
action find
entity Q18261580
relation P684
type Q863908
[ANSWER] is an orthologous gene for [ANSWER]
['Q18261580', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?b WHERE { resource:Q18261580 property:P684 ?b . ?b rdf:type ontology:Q863908 }
Ube2d3
Ube2d3 is an orthologous gene for Ube2d3
Ube2d3
action filter_type
action find
entity Ube2d3
relation ortholog
type nucleic acid sequence
['Ube2d3', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?b WHERE { resource:Ube2d3 property:ortholog ?b . ?b rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q24419454 Q18261580
P684
Q863908
USER
Is Ube2d3 an otrhologus gene for that one ?
(Q24419454,P684,Q18261580)
action is_in
entity Q18261580
action find
entity Q24419454
relation P684
['Q24419454', 'P684', 'Q18261580']
ASK WHERE { resource:Q24419454 property:P684 resource:Q18261580 }
Ube2d3 Ube2d3
action is_in
entity Ube2d3
action find
entity Ube2d3
relation ortholog
['Ube2d3', 'ortholog', 'Ube2d3']
ASK WHERE { resource:Ube2d3 property:ortholog resource:Ube2d3 }
[]
nucleic acid sequence
SYSTEM
YES
(Q24419454,P684,Q18261580)
action is_in
entity Q18261580
action find
entity Q24419454
relation P684
[ANSWER]
['Q24419454', 'P684', 'Q18261580']
ASK WHERE { resource:Q24419454 property:P684 resource:Q18261580 }
Yes
action is_in
entity Ube2d3
action find
entity Ube2d3
relation ortholog
['Ube2d3', 'ortholog', 'Ube2d3']
ASK WHERE { resource:Ube2d3 property:ortholog resource:Ube2d3 }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q21986574 Q23128005
P702
Q863908
USER
Is 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein    VC2308 the gene that encodes Unconventional myosin-Id ?
(Q21986574,P702,Q23128005)
action is_in
entity Q23128005
action find
entity Q21986574
relation P702
['Q21986574', 'P702', 'Q23128005']
ASK WHERE { resource:Q21986574 property:P702 resource:Q23128005 }
Unconventional myosin-Id 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein    VC2308
action is_in
entity 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein    VC2308
action find
entity Unconventional myosin-Id
relation encoded by
['Unconventional myosin-Id', 'encoded by', '4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein    VC2308']
ASK WHERE { resource:Unconventional_myosin-Id property:encoded_by resource:4-methyl-5(B-hydroxyethyl)-thiazole_monophosphate_biosynthesis_protein____VC2308 }
[]
nucleic acid sequence
SYSTEM
NO
(Q21986574,P702,Q23128005)
action is_in
entity Q23128005
action find
entity Q21986574
relation P702
[ANSWER]
['Q21986574', 'P702', 'Q23128005']
ASK WHERE { resource:Q21986574 property:P702 resource:Q23128005 }
No
action is_in
entity 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein    VC2308
action find
entity Unconventional myosin-Id
relation encoded by
['Unconventional myosin-Id', 'encoded by', '4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein    VC2308']
ASK WHERE { resource:Unconventional_myosin-Id property:encoded_by resource:4-methyl-5(B-hydroxyethyl)-thiazole_monophosphate_biosynthesis_protein____VC2308 }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q21103207
P129
Q8386 Q181394 Q181394
USER
Which nutrients can communicate with greater number of drugs or nutrients than G-protein coupled bile acid receptor 1 ?
(c(Q181394),P129,c(Q8386)|c(Q181394))
action greater
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find
entity Q21103207
relation P129
type Q8386
type Q181394
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?h ) WHERE { resource:Q21103207 property:P129 ?s . { VALUES ( ?b ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?s rdf:type ?b } } } . FILTER ( ?m > ?h ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?m ) ?g WHERE { ?o rdf:type ?y . VALUES ( ?y ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } GROUP BY ?g } }
G-protein coupled bile acid receptor 1
action greater
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find
entity G-protein coupled bile acid receptor 1
relation physically interacts with
type drug
type nutrient
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?h ) WHERE { resource:G-protein_coupled_bile_acid_receptor_1 property:physically_interacts_with ?s . { VALUES ( ?b ) { ( ontology:drug ) ( ontology:nutrient ) } . ?s rdf:type ?b } } } . FILTER ( ?m > ?h ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?m ) ?g WHERE { ?o rdf:type ?y . VALUES ( ?y ) { ( ontology:nutrient ) ( ontology:drug ) } } GROUP BY ?g } }
[]
drug nutrient nutrient
Q2034004 Q424401 Q1949517
SYSTEM
D(2) dopamine receptor, Epidermal growth factor receptor, 5-hydroxytryptamine receptor 2A
Q7050954 Q21116154 Q309513 Q21173427 Q308856 Q4847910 Q2271947 Q21109971 Q7671480 Q287961 Q2663095 Q21497881 Q21173164 Q417057 Q21154358 Q5123372 Q1499998 Q7553281 Q410142 Q420470 Q288797 Q21172390 Q21107843 Q287958 Q1084878 Q21126810 Q415287 Q7671479 Q7169506 Q415607 Q254943 Q15323278 Q21110867 Q21109974 Q5038044 Q21109218 Q21122995 Q21496563 Q21107890 Q410798 Q6414726 Q4847900 Q4847907 Q4639596 Q21116946 Q21114332 Q6901317 Q416601 Q5401858 Q5401857 Q4734884 Q4734887 Q4734886 Q22676679 Q21173381 Q21497890 Q21116162 Q21116164 Q2844056 Q5773155 Q21112690 Q22679015 Q21115334 Q14905969 Q21118353 Q21175110 Q21173406 Q21119818 Q21115051 Q21115052 Q5513985 Q415364 Q21109355 Q409867 Q4734894 Q21110872 Q4734892 Q21114578 Q3454525 Q21108118 Q4734891 Q21114576 Q21131500 Q21498865 Q21123247 Q128861 Q21119156 Q2819188 Q21119157 Q21122493 Q4897175 Q21102111 Q412214 Q21132917 Q21132915 Q6592965 Q905000 Q14912057 Q8083989 Q21497878 Q21111833 Q21122997 Q3062781 Q12746120 Q21138907 Q5629167 Q21115815 Q21115816 Q21115819 Q21110532 Q21108125 Q5446453 Q21115046 Q21115043 Q7834290 Q21114582 Q21497939 Q3454531 Q21497937 Q21109462 Q3415811 Q424401 Q21130911 Q587961 Q21096394 Q21496564 Q21111265 Q1949517 Q21109363 Q21109359 Q6592976 Q21102146 Q5520260 Q2034004 Q21134814
(c(Q181394),P129,c(Q8386)|c(Q181394))
action greater
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find
entity Q21103207
relation P129
type Q8386
type Q181394
[ANSWERS] can communicate with greater number of drugs or nutrients than G-protein coupled bile acid receptor 1
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?h ) WHERE { resource:Q21103207 property:P129 ?s . { VALUES ( ?b ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?s rdf:type ?b } } } . FILTER ( ?m > ?h ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?m ) ?g WHERE { ?o rdf:type ?y . VALUES ( ?y ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } GROUP BY ?g } }
Sodium-dependent noradrenaline transporter Adenosine receptor A3 Histamine H1 receptor Histone deacetylase 9 D(4) dopamine receptor Muscarinic acetylcholine receptor M2 Sodium-dependent dopamine transporter Cation channel sperm-associated protein 4 Transient receptor potential cation channel subfamily M member 4 Beta-2 adrenergic receptor Glucocorticoid receptor G protein-activated inward rectifier potassium channel 4 Carbonic anhydrase 1 Vitamin D3 receptor Histone deacetylase 3 Mu-type opioid receptor Voltage-dependent L-type calcium channel subunit alpha-1C Solute carrier family 12 member 3 Sodium-dependent serotonin transporter Cystic fibrosis transmembrane conductance regulator 5-hydroxytryptamine receptor 1B Vascular endothelial growth factor receptor 2 Potassium voltage-gated channel subfamily A member 10 Beta-1 adrenergic receptor Peroxisome proliferator-activated receptor gamma Prostaglandin G/H synthase 1 Aromatase Transient receptor potential cation channel subfamily M member 3 Peroxisome proliferator-activated receptor alpha 3-hydroxy-3-methylglutaryl-coenzyme A reductase Retinoic acid receptor alpha Transient receptor potential cation channel subfamily A member 1 D(1A) dopamine receptor Cation channel sperm-associated protein 3 Carbonic anhydrase 4 Serine/threonine-protein kinase B-raf Melatonin receptor type 1A Potassium voltage-gated channel subfamily C member 1 Potassium voltage-gated channel subfamily A member 7 cGMP-specific 3',5'-cyclic phosphodiesterase ATP-sensitive inward rectifier potassium channel 11 Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 5-hydroxytryptamine receptor 2B Carbonic anhydrase 12 Tubulin beta chain Amine oxidase [flavin-containing] A Androgen receptor Estrogen receptor Estrogen receptor beta Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor Alpha-1B adrenergic receptor Acetylcholinesterase Histone deacetylase 6 ATP-sensitive inward rectifier potassium channel 8 Adenosine receptor A2a Adenosine receptor A2b Muscarinic acetylcholine receptor M3 Histone deacetylase 2 fMet-Leu-Phe receptor Cholinesterase Delta-type opioid receptor Potassium voltage-gated channel subfamily A member 1 Vascular endothelial growth factor receptor 3 Vitamin K epoxide reductase complex subunit 1 Histone deacetylase 8 Intermediate conductance calcium-activated potassium channel protein 4 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 1F Gonadotropin-releasing hormone receptor Prostaglandin G/H synthase 2 5-hydroxytryptamine receptor 7 Nuclear receptor subfamily 1 group I member 2 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-3 Progesterone receptor 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-5 D(1B) dopamine receptor Beta-3 adrenergic receptor cGMP-inhibited 3',5'-cyclic phosphodiesterase A Angiotensin-converting enzyme Inosine-5'-monophosphate dehydrogenase 2 Type-1 angiotensin II receptor Inosine-5'-monophosphate dehydrogenase 1 Prostaglandin F2-alpha receptor Beta-3 adrenergic receptor Acid-sensing ion channel 3 Dipeptidyl peptidase 4 Carbonic anhydrase 14 Carbonic anhydrase 7 Retinoic acid receptor gamma Potassium voltage-gated channel subfamily H member 2 ATP-sensitive inward rectifier potassium channel 11 Kappa-type opioid receptor G protein-activated inward rectifier potassium channel 2 Cation channel sperm-associated protein 2 Melatonin receptor type 1B Adenosine receptor A1 Muscarinic acetylcholine receptor M5 Ryanodine receptor 1 Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Potassium voltage-gated channel subfamily H member 1 5-hydroxytryptamine receptor 3A Fibroblast growth factor receptor 1 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-2 5-hydroxytryptamine receptor 7 Mineralocorticoid receptor 5-hydroxytryptamine receptor 5A Amine oxidase [flavin-containing] B Ryanodine receptor 2 Epidermal growth factor receptor Glutamate receptor ionotropic, NMDA 2D Tyrosine-protein kinase ABL1 Potassium voltage-gated channel subfamily A member 5 Potassium voltage-gated channel subfamily A member 7 Cation channel sperm-associated protein 1 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 6 5-hydroxytryptamine receptor 5A Retinoic acid receptor beta Voltage-dependent L-type calcium channel subunit alpha-1D Gamma-aminobutyric acid receptor subunit alpha-1 D(2) dopamine receptor Equilibrative nucleoside transporter 4
D(2) dopamine receptor, Epidermal growth factor receptor and 5-hydroxytryptamine receptor 2A can communicate with greater number of drugs or nutrients than G-protein coupled bile acid receptor 1
D(2) dopamine receptor Epidermal growth factor receptor 5-hydroxytryptamine receptor 2A
action greater
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find
entity G-protein coupled bile acid receptor 1
relation physically interacts with
type drug
type nutrient
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?h ) WHERE { resource:G-protein_coupled_bile_acid_receptor_1 property:physically_interacts_with ?s . { VALUES ( ?b ) { ( ontology:drug ) ( ontology:nutrient ) } . ?s rdf:type ?b } } } . FILTER ( ?m > ?h ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?m ) ?g WHERE { ?o rdf:type ?y . VALUES ( ?y ) { ( ontology:nutrient ) ( ontology:drug ) } } GROUP BY ?g } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type|Incomplete
Q21121816
P129
Q8386 Q181394 Q181394
USER
And also tell me about P2Y purinoceptor 13?
(c(Q181394),P129,c(Q8386)|c(Q181394))
action greater
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find
entity Q21121816
relation P129
type Q8386
type Q181394
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( COUNT ( ?q ) AS ?j ) ?f WHERE { VALUES ( ?z ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?q rdf:type ?z } GROUP BY ?f } . FILTER ( ?j > ?a ) . { SELECT DISTINCT ( COUNT ( ?e ) AS ?a ) WHERE { { { ?e rdf:type ontology:Q8386 } UNION { ?e rdf:type ontology:Q181394 } } . resource:Q21121816 property:P129 ?e } } }
P2Y purinoceptor 13
action greater
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find
entity P2Y purinoceptor 13
relation physically interacts with
type drug
type nutrient
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( COUNT ( ?q ) AS ?j ) ?f WHERE { VALUES ( ?z ) { ( ontology:drug ) ( ontology:nutrient ) } . ?q rdf:type ?z } GROUP BY ?f } . FILTER ( ?j > ?a ) . { SELECT DISTINCT ( COUNT ( ?e ) AS ?a ) WHERE { { { ?e rdf:type ontology:drug } UNION { ?e rdf:type ontology:nutrient } } . resource:P2Y_purinoceptor_13 property:physically_interacts_with ?e } } }
[]
drug nutrient nutrient
Q2034004 Q424401 Q1949517
SYSTEM
D(2) dopamine receptor, Epidermal growth factor receptor, 5-hydroxytryptamine receptor 2A
Q7050954 Q21116154 Q309513 Q21173427 Q308856 Q4847910 Q2271947 Q21109971 Q7671480 Q287961 Q2663095 Q21497881 Q21173164 Q417057 Q21154358 Q5123372 Q1499998 Q7553281 Q410142 Q420470 Q288797 Q21172390 Q21107843 Q287958 Q1084878 Q21126810 Q415287 Q7671479 Q7169506 Q415607 Q254943 Q15323278 Q21110867 Q21109974 Q5038044 Q21109218 Q21122995 Q21496563 Q21107890 Q410798 Q6414726 Q4847900 Q4847907 Q4639596 Q21116946 Q21114332 Q6901317 Q416601 Q5401858 Q5401857 Q4734884 Q4734887 Q4734886 Q22676679 Q21173381 Q21497890 Q21116162 Q21116164 Q2844056 Q5773155 Q21112690 Q22679015 Q21115334 Q14905969 Q21118353 Q21175110 Q21173406 Q21119818 Q21115051 Q21115052 Q5513985 Q415364 Q21109355 Q409867 Q4734894 Q21110872 Q4734892 Q21114578 Q3454525 Q21108118 Q4734891 Q21114576 Q21131500 Q21498865 Q21123247 Q128861 Q21119156 Q2819188 Q21119157 Q21122493 Q4897175 Q21102111 Q412214 Q21132917 Q21132915 Q6592965 Q905000 Q14912057 Q8083989 Q21497878 Q21111833 Q21122997 Q3062781 Q12746120 Q21138907 Q5629167 Q21115815 Q21115816 Q21115819 Q21110532 Q21108125 Q5446453 Q21115046 Q21115043 Q7834290 Q21114582 Q21497939 Q3454531 Q21497937 Q21109462 Q3415811 Q424401 Q21130911 Q587961 Q21096394 Q21496564 Q21111265 Q1949517 Q21109363 Q21109359 Q6592976 Q21102146 Q5520260 Q2034004 Q21134814
(c(Q181394),P129,c(Q8386)|c(Q181394))
action greater
action union
action find_tuple_counts
relation P129
type Q181394
type Q8386
action find_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find
entity Q21121816
relation P129
type Q8386
type Q181394
[ANSWERS]
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q8386'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( COUNT ( ?q ) AS ?j ) ?f WHERE { VALUES ( ?z ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?q rdf:type ?z } GROUP BY ?f } . FILTER ( ?j > ?a ) . { SELECT DISTINCT ( COUNT ( ?e ) AS ?a ) WHERE { { { ?e rdf:type ontology:Q8386 } UNION { ?e rdf:type ontology:Q181394 } } . resource:Q21121816 property:P129 ?e } } }
Sodium-dependent noradrenaline transporter Adenosine receptor A3 Histamine H1 receptor Histone deacetylase 9 D(4) dopamine receptor Muscarinic acetylcholine receptor M2 Sodium-dependent dopamine transporter Cation channel sperm-associated protein 4 Transient receptor potential cation channel subfamily M member 4 Beta-2 adrenergic receptor Glucocorticoid receptor G protein-activated inward rectifier potassium channel 4 Carbonic anhydrase 1 Vitamin D3 receptor Histone deacetylase 3 Mu-type opioid receptor Voltage-dependent L-type calcium channel subunit alpha-1C Solute carrier family 12 member 3 Sodium-dependent serotonin transporter Cystic fibrosis transmembrane conductance regulator 5-hydroxytryptamine receptor 1B Vascular endothelial growth factor receptor 2 Potassium voltage-gated channel subfamily A member 10 Beta-1 adrenergic receptor Peroxisome proliferator-activated receptor gamma Prostaglandin G/H synthase 1 Aromatase Transient receptor potential cation channel subfamily M member 3 Peroxisome proliferator-activated receptor alpha 3-hydroxy-3-methylglutaryl-coenzyme A reductase Retinoic acid receptor alpha Transient receptor potential cation channel subfamily A member 1 D(1A) dopamine receptor Cation channel sperm-associated protein 3 Carbonic anhydrase 4 Serine/threonine-protein kinase B-raf Melatonin receptor type 1A Potassium voltage-gated channel subfamily C member 1 Potassium voltage-gated channel subfamily A member 7 cGMP-specific 3',5'-cyclic phosphodiesterase ATP-sensitive inward rectifier potassium channel 11 Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 5-hydroxytryptamine receptor 2B Carbonic anhydrase 12 Tubulin beta chain Amine oxidase [flavin-containing] A Androgen receptor Estrogen receptor Estrogen receptor beta Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor Alpha-1B adrenergic receptor Acetylcholinesterase Histone deacetylase 6 ATP-sensitive inward rectifier potassium channel 8 Adenosine receptor A2a Adenosine receptor A2b Muscarinic acetylcholine receptor M3 Histone deacetylase 2 fMet-Leu-Phe receptor Cholinesterase Delta-type opioid receptor Potassium voltage-gated channel subfamily A member 1 Vascular endothelial growth factor receptor 3 Vitamin K epoxide reductase complex subunit 1 Histone deacetylase 8 Intermediate conductance calcium-activated potassium channel protein 4 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 1F Gonadotropin-releasing hormone receptor Prostaglandin G/H synthase 2 5-hydroxytryptamine receptor 7 Nuclear receptor subfamily 1 group I member 2 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-3 Progesterone receptor 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-5 D(1B) dopamine receptor Beta-3 adrenergic receptor cGMP-inhibited 3',5'-cyclic phosphodiesterase A Angiotensin-converting enzyme Inosine-5'-monophosphate dehydrogenase 2 Type-1 angiotensin II receptor Inosine-5'-monophosphate dehydrogenase 1 Prostaglandin F2-alpha receptor Beta-3 adrenergic receptor Acid-sensing ion channel 3 Dipeptidyl peptidase 4 Carbonic anhydrase 14 Carbonic anhydrase 7 Retinoic acid receptor gamma Potassium voltage-gated channel subfamily H member 2 ATP-sensitive inward rectifier potassium channel 11 Kappa-type opioid receptor G protein-activated inward rectifier potassium channel 2 Cation channel sperm-associated protein 2 Melatonin receptor type 1B Adenosine receptor A1 Muscarinic acetylcholine receptor M5 Ryanodine receptor 1 Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Potassium voltage-gated channel subfamily H member 1 5-hydroxytryptamine receptor 3A Fibroblast growth factor receptor 1 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-2 5-hydroxytryptamine receptor 7 Mineralocorticoid receptor 5-hydroxytryptamine receptor 5A Amine oxidase [flavin-containing] B Ryanodine receptor 2 Epidermal growth factor receptor Glutamate receptor ionotropic, NMDA 2D Tyrosine-protein kinase ABL1 Potassium voltage-gated channel subfamily A member 5 Potassium voltage-gated channel subfamily A member 7 Cation channel sperm-associated protein 1 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 6 5-hydroxytryptamine receptor 5A Retinoic acid receptor beta Voltage-dependent L-type calcium channel subunit alpha-1D Gamma-aminobutyric acid receptor subunit alpha-1 D(2) dopamine receptor Equilibrative nucleoside transporter 4
D(2) dopamine receptor Epidermal growth factor receptor 5-hydroxytryptamine receptor 2A
action greater
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find
entity P2Y purinoceptor 13
relation physically interacts with
type drug
type nutrient
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'drug'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( COUNT ( ?q ) AS ?j ) ?f WHERE { VALUES ( ?z ) { ( ontology:drug ) ( ontology:nutrient ) } . ?q rdf:type ?z } GROUP BY ?f } . FILTER ( ?j > ?a ) . { SELECT DISTINCT ( COUNT ( ?e ) AS ?a ) WHERE { { { ?e rdf:type ontology:drug } UNION { ?e rdf:type ontology:nutrient } } . resource:P2Y_purinoceptor_13 property:physically_interacts_with ?e } } }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q15978631 Q21112661
P703 P688
Q863908
USER
Which nucleic acid sequences encode Angiomotin-like protein 2 and are found in the taxon Homo sapiens ?
AND((c(Q863908),P688,Q21112661), (c(Q863908),P703,Q15978631))
action filter_type
action intersection
action find_reverse
entity Q21112661
relation P688
action find_reverse
entity Q15978631
relation P703
type Q863908
{'AND': [[{'concept': 'Q863908'}, 'P688', 'Q21112661'], [{'concept': 'Q863908'}, 'P703', 'Q15978631']]}
SELECT DISTINCT ?w WHERE { ?w property:P703 resource:Q15978631 . ?w property:P688 resource:Q21112661 . ?w rdf:type ontology:Q863908 }
Homo sapiens Angiomotin-like protein 2
action filter_type
action intersection
action find_reverse
entity Angiomotin-like protein 2
relation encodes
action find_reverse
entity Homo sapiens
relation found in taxon
type nucleic acid sequence
{'AND': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Angiomotin-like protein 2'], [{'concept': 'nucleic acid sequence'}, 'found in taxon', 'Homo sapiens']]}
SELECT DISTINCT ?w WHERE { ?w property:found_in_taxon resource:Homo_sapiens . ?w property:encodes resource:Angiomotin-like_protein_2 . ?w rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18040276
SYSTEM
AMOTL2
Q18040276
AND((c(Q863908),P688,Q21112661), (c(Q863908),P703,Q15978631))
action filter_type
action intersection
action find_reverse
entity Q21112661
relation P688
action find_reverse
entity Q15978631
relation P703
type Q863908
[ANSWER] encode Angiomotin-like protein 2 and are found in the taxon Homo sapiens
{'AND': [[{'concept': 'Q863908'}, 'P688', 'Q21112661'], [{'concept': 'Q863908'}, 'P703', 'Q15978631']]}
SELECT DISTINCT ?w WHERE { ?w property:P703 resource:Q15978631 . ?w property:P688 resource:Q21112661 . ?w rdf:type ontology:Q863908 }
AMOTL2
AMOTL2 encode Angiomotin-like protein 2 and are found in the taxon Homo sapiens
AMOTL2
action filter_type
action intersection
action find_reverse
entity Angiomotin-like protein 2
relation encodes
action find_reverse
entity Homo sapiens
relation found in taxon
type nucleic acid sequence
{'AND': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Angiomotin-like protein 2'], [{'concept': 'nucleic acid sequence'}, 'found in taxon', 'Homo sapiens']]}
SELECT DISTINCT ?w WHERE { ?w property:found_in_taxon resource:Homo_sapiens . ?w property:encodes resource:Angiomotin-like_protein_2 . ?w rdf:type ontology:nucleic_acid_sequence }
[]