Simple Question (Direct)
Simple Question
Q27754205
P702
Q863908
USER
Which gene encodes gamma-aminobutyraldehyde dehydrogenase    SCO5666 ?
(Q27754205,P702,c(Q863908))
action filter_type
action find
entity Q27754205
relation P702
type Q863908
['Q27754205', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?r WHERE { resource:Q27754205 property:P702 ?r . ?r rdf:type ontology:Q863908 }
gamma-aminobutyraldehyde dehydrogenase    SCO5666
action filter_type
action find
entity gamma-aminobutyraldehyde dehydrogenase    SCO5666
relation encoded by
type nucleic acid sequence
['gamma-aminobutyraldehyde dehydrogenase    SCO5666', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?r WHERE { resource:gamma-aminobutyraldehyde_dehydrogenase____SCO5666 property:encoded_by ?r . ?r rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23291858
SYSTEM
gamma-aminobutyraldehyde dehydrogenase    SCO5666
Q23291858
(Q27754205,P702,c(Q863908))
action filter_type
action find
entity Q27754205
relation P702
type Q863908
Gamma-aminobutyraldehyde dehydrogenase SCO5666 encodes gamma-aminobutyraldehyde dehydrogenase SCO5666
['Q27754205', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?r WHERE { resource:Q27754205 property:P702 ?r . ?r rdf:type ontology:Q863908 }
gamma-aminobutyraldehyde dehydrogenase    SCO5666
Gamma-aminobutyraldehyde dehydrogenase SCO5666 encodes gamma-aminobutyraldehyde dehydrogenase SCO5666
gamma-aminobutyraldehyde dehydrogenase    SCO5666
action filter_type
action find
entity gamma-aminobutyraldehyde dehydrogenase    SCO5666
relation encoded by
type nucleic acid sequence
['gamma-aminobutyraldehyde dehydrogenase    SCO5666', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?r WHERE { resource:gamma-aminobutyraldehyde_dehydrogenase____SCO5666 property:encoded_by ?r . ?r rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23291858
P703
Q631147
USER
What is the taxon to which that nucleic acid sequence belongs to ?
(Q23291858,P703,c(Q631147))
action filter_type
action find
entity Q23291858
relation P703
type Q631147
['Q23291858', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?y WHERE { resource:Q23291858 property:P703 ?y . ?y rdf:type ontology:Q631147 }
gamma-aminobutyraldehyde dehydrogenase    SCO5666
action filter_type
action find
entity gamma-aminobutyraldehyde dehydrogenase    SCO5666
relation found in taxon
type infraspecific name
['gamma-aminobutyraldehyde dehydrogenase    SCO5666', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?y WHERE { resource:gamma-aminobutyraldehyde_dehydrogenase____SCO5666 property:found_in_taxon ?y . ?y rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102988
SYSTEM
Streptomyces coelicolor A3(2)
Q21102988
(Q23291858,P703,c(Q631147))
action filter_type
action find
entity Q23291858
relation P703
type Q631147
[ANSWER]
['Q23291858', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?y WHERE { resource:Q23291858 property:P703 ?y . ?y rdf:type ontology:Q631147 }
Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
Streptomyces coelicolor A3(2)
action filter_type
action find
entity gamma-aminobutyraldehyde dehydrogenase    SCO5666
relation found in taxon
type infraspecific name
['gamma-aminobutyraldehyde dehydrogenase    SCO5666', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?y WHERE { resource:gamma-aminobutyraldehyde_dehydrogenase____SCO5666 property:found_in_taxon ?y . ?y rdf:type ontology:infraspecific_name }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q21102988 Q23293385
P703
Q863908
USER
Is acyltransferase    SCO1566 a part of the taxon that infraspecific name ?
(Q23293385,P703,Q21102988)
action is_in
entity Q21102988
action find
entity Q23293385
relation P703
['Q23293385', 'P703', 'Q21102988']
ASK WHERE { resource:Q23293385 property:P703 resource:Q21102988 }
Streptomyces coelicolor A3(2) acyltransferase    SCO1566
action is_in
entity Streptomyces coelicolor A3(2)
action find
entity acyltransferase    SCO1566
relation found in taxon
['acyltransferase    SCO1566', 'found in taxon', 'Streptomyces coelicolor A3(2)']
ASK WHERE { resource:acyltransferase____SCO1566 property:found_in_taxon resource:Streptomyces_coelicolor_A3(2) }
[]
nucleic acid sequence
SYSTEM
YES
(Q23293385,P703,Q21102988)
action is_in
entity Q21102988
action find
entity Q23293385
relation P703
[ANSWER]
['Q23293385', 'P703', 'Q21102988']
ASK WHERE { resource:Q23293385 property:P703 resource:Q21102988 }
Yes
action is_in
entity Streptomyces coelicolor A3(2)
action find
entity acyltransferase    SCO1566
relation found in taxon
['acyltransferase    SCO1566', 'found in taxon', 'Streptomyces coelicolor A3(2)']
ASK WHERE { resource:acyltransferase____SCO1566 property:found_in_taxon resource:Streptomyces_coelicolor_A3(2) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q22312058 Q27754205
P703
Q631147
USER
Which infraspecific names are gamma-aminobutyraldehyde dehydrogenase    SCO5666 or hypothetical protein    PP_1648 found ?
OR((Q27754205,P703,c(Q631147)), (Q22312058,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27754205
relation P703
action find
entity Q22312058
relation P703
type Q631147
{'OR': [['Q27754205', 'P703', {'concept': 'Q631147'}], ['Q22312058', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?c WHERE { { VALUES ( ?i ) { ( resource:Q27754205 ) ( resource:Q22312058 ) } . ?i property:P703 ?c } . ?c rdf:type ontology:Q631147 }
hypothetical protein    PP_1648 gamma-aminobutyraldehyde dehydrogenase    SCO5666
action filter_type
action union
action find
entity gamma-aminobutyraldehyde dehydrogenase    SCO5666
relation found in taxon
action find
entity hypothetical protein    PP_1648
relation found in taxon
type infraspecific name
{'OR': [['gamma-aminobutyraldehyde dehydrogenase    SCO5666', 'found in taxon', {'concept': 'infraspecific name'}], ['hypothetical protein    PP_1648', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?c WHERE { { VALUES ( ?i ) { ( resource:gamma-aminobutyraldehyde_dehydrogenase____SCO5666 ) ( resource:hypothetical_protein____PP_1648 ) } . ?i property:found_in_taxon ?c } . ?c rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21079489 Q21102988
SYSTEM
Pseudomonas putida KT2440, Streptomyces coelicolor A3(2)
Q21079489 Q21102988
OR((Q27754205,P703,c(Q631147)), (Q22312058,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27754205
relation P703
action find
entity Q22312058
relation P703
type Q631147
[ANSWERS] are gamma-aminobutyraldehyde dehydrogenase SCO5666 or hypothetical protein PP_1648 found
{'OR': [['Q27754205', 'P703', {'concept': 'Q631147'}], ['Q22312058', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?c WHERE { { VALUES ( ?i ) { ( resource:Q27754205 ) ( resource:Q22312058 ) } . ?i property:P703 ?c } . ?c rdf:type ontology:Q631147 }
Pseudomonas putida KT2440 Streptomyces coelicolor A3(2)
Pseudomonas putida KT2440 and Streptomyces coelicolor A3(2) are gamma-aminobutyraldehyde dehydrogenase SCO5666 or hypothetical protein PP_1648 found
Pseudomonas putida KT2440 Streptomyces coelicolor A3(2)
action filter_type
action union
action find
entity gamma-aminobutyraldehyde dehydrogenase    SCO5666
relation found in taxon
action find
entity hypothetical protein    PP_1648
relation found in taxon
type infraspecific name
{'OR': [['gamma-aminobutyraldehyde dehydrogenase    SCO5666', 'found in taxon', {'concept': 'infraspecific name'}], ['hypothetical protein    PP_1648', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?c WHERE { { VALUES ( ?i ) { ( resource:gamma-aminobutyraldehyde_dehydrogenase____SCO5666 ) ( resource:hypothetical_protein____PP_1648 ) } . ?i property:found_in_taxon ?c } . ?c rdf:type ontology:infraspecific_name }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type
Q21113831
P129
Q181394 Q79529 Q181394
USER
How many nutrients do more number of chemical substances and nutrients communicate with than Type-2 angiotensin II receptor ?
(c(Q79529)|c(Q181394),P129,c(Q181394))
action count
action greater
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find_reverse
entity Q21113831
relation P129
type Q79529
type Q181394
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?f ) WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?e ) WHERE { { ?x property:P129 ?b . ?b rdf:type ontology:Q181394 . ?x rdf:type ontology:Q79529 } UNION { ?x property:P129 ?b . ?b rdf:type ontology:Q181394 . ?x rdf:type ontology:Q181394 } } GROUP BY ?b } . FILTER ( ?e > ?r ) . { SELECT DISTINCT ( COUNT ( ?n ) AS ?r ) WHERE { ?n property:P129 resource:Q21113831 . { { ?n rdf:type ontology:Q79529 } UNION { ?n rdf:type ontology:Q181394 } } } } }
Type-2 angiotensin II receptor
action count
action greater
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find_reverse
entity Type-2 angiotensin II receptor
relation physically interacts with
type chemical substance
type nutrient
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?f ) WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?e ) WHERE { { ?x property:physically_interacts_with ?b . ?b rdf:type ontology:nutrient . ?x rdf:type ontology:chemical_substance } UNION { ?x property:physically_interacts_with ?b . ?b rdf:type ontology:nutrient . ?x rdf:type ontology:nutrient } } GROUP BY ?b } . FILTER ( ?e > ?r ) . { SELECT DISTINCT ( COUNT ( ?n ) AS ?r ) WHERE { ?n property:physically_interacts_with resource:Type-2_angiotensin_II_receptor . { { ?n rdf:type ontology:chemical_substance } UNION { ?n rdf:type ontology:nutrient } } } } }
[]
nutrient chemical substance nutrient
SYSTEM
298
Q21115605 Q21110942 Q22679043 Q5018799 Q21115219 Q21116154 Q14872770 Q309513 Q21173427 Q308856 Q21982207 Q12746346 Q21108695 Q4847910 Q21123087 Q2271947 Q7671480 Q413209 Q287961 Q2663095 Q905729 Q21111688 Q21107052 Q21119836 Q417057 Q21154358 Q6155969 Q5123372 Q21147674 Q21113310 Q21113312 Q21113313 Q21113170 Q21113172 Q21113176 Q21118071 Q2463389 Q15323688 Q21108789 Q21107107 Q21108624 Q420470 Q7317662 Q21100441 Q288797 Q21114547 Q14865158 Q906403 Q21172390 Q21990430 Q1486720 Q4789588 Q4789584 Q21105011 Q4789587 Q287958 Q5500227 Q1084878 Q21108402 Q21118967 Q6589868 Q21118678 Q21123083 Q14900999 Q7671479 Q7169506 Q7169504 Q21111689 Q21109365 Q5323823 Q21107439 Q15323278 Q21110867 Q21103155 Q14911929 Q21122995 Q21112081 Q511968 Q21123723 Q5198256 Q21123236 Q21125231 Q21117805 Q21123244 Q21123725 Q410798 Q21103207 Q15327635 Q4847900 Q4847907 Q7671495 Q21121815 Q4639596 Q21987842 Q416601 Q5512777 Q5401857 Q21173746 Q21120458 Q4734884 Q4734887 Q4734886 Q21113101 Q21113100 Q21988386 Q424031 Q21173381 Q21110304 Q21114338 Q21497941 Q21102511 Q21987844 Q21119575 Q21132140 Q21126779 Q21126777 Q21116162 Q21116164 Q21105660 Q21991512 Q21113155 Q21981993 Q2844056 Q21494387 Q21120420 Q5773155 Q5500222 Q21112690 Q21120423 Q21125248 Q21115334 Q21118353 Q21121807 Q21124061 Q4822491 Q7799753 Q21108578 Q21113173 Q21173406 Q411978 Q21106540 Q288382 Q4859538 Q21115051 Q21115052 Q909409 Q5513985 Q415364 Q21109298 Q21109355 Q21109354 Q21115954 Q409867 Q4734894 Q21110872 Q4734892 Q21103146 Q21114578 Q3454525 Q21108118 Q4734891 Q21114576 Q21108785 Q21118072 Q21113158 Q21107088 Q21113152 Q21131500 Q21123247 Q5500223 Q21132004 Q21114845 Q15323346 Q21105636 Q21991520 Q7117825 Q7117823 Q21497124 Q6590408 Q21497128 Q21132652 Q6594119 Q21122493 Q7671468 Q7671469 Q12746382 Q21100975 Q4897175 Q1085078 Q21121368 Q7673856 Q21118862 Q21126833 Q21110936 Q7118491 Q22676780 Q21120698 Q905000 Q21113274 Q21115961 Q21115962 Q21115965 Q21105176 Q21113115 Q418404 Q8083989 Q21498709 Q2083074 Q6534535 Q311568 Q21173485 Q5773160 Q21121716 Q6590443 Q21122997 Q3062781 Q21125253 Q12746120 Q11071075 Q6449561 Q7799751 Q4822488 Q5629167 Q21115815 Q21115816 Q21115819 Q288395 Q21110532 Q21108125 Q21115046 Q21115043 Q415271 Q21123722 Q7834290 Q21114585 Q21114582 Q408572 Q21497939 Q3454531 Q21497937 Q21497936 Q21982979 Q21122433 Q21122435 Q3162114 Q21113169 Q21113168 Q424401 Q5009781 Q21113161 Q21119822 Q21172800 Q21173206 Q21173207 Q21123251 Q285613 Q21114850 Q21174141 Q21130911 Q21150595 Q587961 Q7119501 Q21118676 Q21118677 Q15324694 Q21108701 Q21201294 Q14905763 Q21496564 Q9020944 Q21112289 Q7671477 Q21113099 Q1949517 Q21113297 Q21110922 Q21113292 Q21498666 Q21109363 Q21109359 Q21157551 Q21121276 Q7120338 Q21983336 Q288431 Q21103162 Q21121816 Q6589190 Q21097216 Q6155967 Q21100360 Q6714402 Q15324415 Q5520260 Q21115429 Q2356259 Q2034004 Q21113127
(c(Q79529)|c(Q181394),P129,c(Q181394))
action count
action greater
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find_reverse
entity Q21113831
relation P129
type Q79529
type Q181394
[ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?f ) WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?e ) WHERE { { ?x property:P129 ?b . ?b rdf:type ontology:Q181394 . ?x rdf:type ontology:Q79529 } UNION { ?x property:P129 ?b . ?b rdf:type ontology:Q181394 . ?x rdf:type ontology:Q181394 } } GROUP BY ?b } . FILTER ( ?e > ?r ) . { SELECT DISTINCT ( COUNT ( ?n ) AS ?r ) WHERE { ?n property:P129 resource:Q21113831 . { { ?n rdf:type ontology:Q79529 } UNION { ?n rdf:type ontology:Q181394 } } } } }
Vascular endothelial growth factor receptor 1 G-protein coupled receptor 55 Aldose reductase Calcium-activated potassium channel subunit alpha-1 Oxysterols receptor LXR-beta Adenosine receptor A3 Histamine H4 receptor Histamine H1 receptor Histone deacetylase 9 D(4) dopamine receptor Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 Nociceptin receptor G-protein coupled receptor 84 Muscarinic acetylcholine receptor M2 Neuromedin-K receptor Sodium-dependent dopamine transporter Transient receptor potential cation channel subfamily M member 4 Transient receptor potential cation channel subfamily V member 1 Beta-2 adrenergic receptor Glucocorticoid receptor Prostaglandin D2 receptor B2 bradykinin receptor Gap junction alpha-4 protein Small conductance calcium-activated potassium channel protein 1 Vitamin D3 receptor Histone deacetylase 3 Tyrosine-protein kinase JAK3 Mu-type opioid receptor Estrogen-related receptor gamma Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit beta-3 Gamma-aminobutyric acid receptor subunit rho-2 Gap junction delta-3 protein Gap junction delta-4 protein Gap junction delta-2 protein Steroid hormone receptor ERR2 Tyrosine-protein kinase Lyn Transient receptor potential cation channel subfamily V member 2 Potassium voltage-gated channel subfamily KQT member 5 Gap junction alpha-3 protein Platelet-derived growth factor receptor beta Cystic fibrosis transmembrane conductance regulator Nuclear receptor subfamily 1 group D member 2 Bromodomain-containing protein 4 5-hydroxytryptamine receptor 1B Nitric oxide synthase, inducible Potassium voltage-gated channel subfamily KQT member 1 Protein kinase C zeta type Vascular endothelial growth factor receptor 2 P2Y purinoceptor 14 Glutamate receptor 3 Vasopressin V2 receptor Vasopressin V1a receptor cGMP-dependent 3',5'-cyclic phosphodiesterase Vasopressin V1b receptor Beta-1 adrenergic receptor Free fatty acid receptor 3 Peroxisome proliferator-activated receptor gamma Chloride channel protein 2 G-protein coupled receptor 183 Metabotropic glutamate receptor 6 Melanocortin receptor 3 Substance-K receptor Kappa-type opioid receptor Transient receptor potential cation channel subfamily M member 3 Peroxisome proliferator-activated receptor alpha Peroxisome proliferator-activated receptor delta B1 bradykinin receptor 5-hydroxytryptamine receptor 4 Histone acetyltransferase p300 Farnesyl pyrophosphate synthase Transient receptor potential cation channel subfamily A member 1 D(1A) dopamine receptor Glycine receptor subunit alpha-1 Mu-type opioid receptor Melatonin receptor type 1A Gap junction gamma-3 protein Cyclin-dependent kinase 2 Pannexin-2 Cyclin-dependent kinase 9 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform Solute carrier organic anion transporter family member 1A2 cAMP-specific 3',5'-cyclic phosphodiesterase 4A cGMP-inhibited 3',5'-cyclic phosphodiesterase B Pannexin-1 cGMP-specific 3',5'-cyclic phosphodiesterase G-protein coupled bile acid receptor 1 Transient receptor potential cation channel subfamily M member 7 Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 Transient receptor potential cation channel subfamily M member 8 P2Y purinoceptor 11 5-hydroxytryptamine receptor 2B Prostaglandin E2 receptor EP3 subtype Androgen receptor Gamma-aminobutyric acid receptor subunit alpha-4 Estrogen receptor beta Melanocyte-stimulating hormone receptor Proteasome subunit beta type-5 Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor Alpha-1B adrenergic receptor Gap junction beta-6 protein Gap junction beta-5 protein Delta-type opioid receptor Mevalonate kinase Histone deacetylase 6 Galanin receptor type 1 Excitatory amino acid transporter 2 5-hydroxytryptamine receptor 4 Platelet-derived growth factor receptor alpha Prostaglandin E2 receptor EP1 subtype P2Y purinoceptor 1 Aurora kinase C P2Y purinoceptor 4 P2Y purinoceptor 2 Adenosine receptor A2a Adenosine receptor A2b Cyclic nucleotide-gated cation channel alpha-3 Trace amine-associated receptor 5 Gap junction gamma-1 protein fMet-Leu-Phe receptor Muscarinic acetylcholine receptor M3 Steroid hormone receptor ERR1 Prostaglandin E2 receptor EP1 subtype Histone deacetylase 2 Free fatty acid receptor 1 fMet-Leu-Phe receptor Prostaglandin E2 receptor EP3 subtype Solute carrier organic anion transporter family member 1B3 Delta-type opioid receptor Vascular endothelial growth factor receptor 3 P2Y purinoceptor 14 Neurotensin receptor type 1 Aurora kinase B Thyroid hormone receptor beta Squalene synthase Gap junction beta-4 protein Histone deacetylase 8 Thromboxane A2 receptor Geranylgeranyl pyrophosphate synthase Histamine H4 receptor Metabotropic glutamate receptor 2 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 1F Mast/stem cell growth factor receptor Kit Gonadotropin-releasing hormone receptor Prostaglandin G/H synthase 2 Protein kinase C epsilon type 5-hydroxytryptamine receptor 7 Proto-oncogene tyrosine-protein kinase Src Glycine receptor subunit alpha-2 Nuclear receptor subfamily 1 group I member 2 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Glycine receptor subunit alpha-3 Gamma-aminobutyric acid receptor subunit alpha-3 Progesterone receptor 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-5 Potassium voltage-gated channel subfamily KQT member 4 Steroid hormone receptor ERR1 Gap junction alpha-8 protein Gap junction alpha-10 protein Gap junction alpha-5 protein D(1B) dopamine receptor cGMP-inhibited 3',5'-cyclic phosphodiesterase A Free fatty acid receptor 2 Endothelin-1 receptor Protein kinase C gamma type Nuclear receptor subfamily 1 group D member 1 cGMP-gated cation channel alpha-1 Trace amine-associated receptor 1 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform B2 bradykinin receptor Metabotropic glutamate receptor 8 B1 bradykinin receptor Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Prostaglandin F2-alpha receptor Short transient receptor potential channel 5 Short transient receptor potential channel 6 Oxoeicosanoid receptor 1 Macrophage colony-stimulating factor 1 receptor Beta-3 adrenergic receptor Bile acid receptor Sodium- and chloride-dependent GABA transporter 1 Substance-P receptor Glutamate receptor ionotropic, NMDA 1 Polycystic kidney disease 2-like 1 protein G-protein coupled receptor 35 Histone acetyltransferase KAT2B Neuronal acetylcholine receptor subunit alpha-7 P2Y purinoceptor 6 Potassium voltage-gated channel subfamily H member 2 Fatty-acid amide hydrolase 1 Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Anoctamin-1 Gap junction beta-1 protein C-C chemokine receptor type 5 Kappa-type opioid receptor Adenosine receptor A2b Aquaporin-1 Leukotriene B4 receptor 2 Histamine H2 receptor Hydroxycarboxylic acid receptor 2 Histone deacetylase 5 Nitric oxide synthase, brain Oxytocin receptor Melatonin receptor type 1B Adenosine receptor A1 Solute carrier organic anion transporter family member 1B1 Muscarinic acetylcholine receptor M5 Trace amine-associated receptor 1 Potassium voltage-gated channel subfamily KQT member 2 Thyroid hormone receptor alpha Aurora kinase A Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Histamine H3 receptor Potassium voltage-gated channel subfamily H member 1 5-hydroxytryptamine receptor 3A 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A Receptor tyrosine-protein kinase erbB-2 Pannexin-3 Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-6 Gamma-aminobutyric acid receptor subunit alpha-2 Sigma non-opioid intracellular receptor 1 5-hydroxytryptamine receptor 7 Mineralocorticoid receptor 5-hydroxytryptamine receptor 5A 5-hydroxytryptamine receptor 3A Alpha-1B adrenergic receptor Orexin receptor type 1 Orexin receptor type 2 Tyrosine-protein kinase JAK2 Gap junction beta-7 protein Gap junction gamma-2 protein Epidermal growth factor receptor Receptor-type tyrosine-protein kinase FLT3 Gap junction alpha-9 protein Inward rectifier potassium channel 4 Free fatty acid receptor 4 Histone deacetylase 4 Histone deacetylase 7 cAMP-specific 3',5'-cyclic phosphodiesterase 7B Serine/threonine-protein kinase mTOR Protein kinase C beta type Prostaglandin D2 receptor 2 Glutamate receptor ionotropic, NMDA 2D Cannabinoid receptor 2 Tyrosine-protein kinase ABL1 Protein kinase C alpha type Melanocortin receptor 4 Melanocortin receptor 5 Transient receptor potential cation channel subfamily V member 3 Glutamate receptor ionotropic, kainate 1 Cannabinoid receptor 1 Inward rectifier potassium channel 2 Potassium voltage-gated channel subfamily A member 7 Tyrosine-protein kinase Lck Oxysterols receptor LXR-alpha Transient receptor potential cation channel subfamily M member 2 Gap junction beta-3 protein 5-hydroxytryptamine receptor 2A Gamma-aminobutyric acid receptor subunit delta N-arachidonyl glycine receptor Gamma-aminobutyric acid receptor subunit rho-3 5-hydroxytryptamine receptor 1B 5-hydroxytryptamine receptor 6 5-hydroxytryptamine receptor 5A Histone deacetylase 10 Proton-coupled amino acid transporter 1 Protein kinase C delta type Histamine H3 receptor Metabotropic glutamate receptor 1 Glycine receptor subunit beta P2Y purinoceptor 13 Metabotropic glutamate receptor 5 Tyrosine-protein kinase Yes Tyrosine-protein kinase JAK1 Dual specificity mitogen-activated protein kinase kinase 1 Mitogen-activated protein kinase 14 Transient receptor potential cation channel subfamily M member 8 Gamma-aminobutyric acid receptor subunit alpha-1 High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Gap junction alpha-1 protein D(2) dopamine receptor Gap junction beta-2 protein
298
action count
action greater
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find_reverse
entity Type-2 angiotensin II receptor
relation physically interacts with
type chemical substance
type nutrient
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?f ) WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?e ) WHERE { { ?x property:physically_interacts_with ?b . ?b rdf:type ontology:nutrient . ?x rdf:type ontology:chemical_substance } UNION { ?x property:physically_interacts_with ?b . ?b rdf:type ontology:nutrient . ?x rdf:type ontology:nutrient } } GROUP BY ?b } . FILTER ( ?e > ?r ) . { SELECT DISTINCT ( COUNT ( ?n ) AS ?r ) WHERE { ?n property:physically_interacts_with resource:Type-2_angiotensin_II_receptor . { { ?n rdf:type ontology:chemical_substance } UNION { ?n rdf:type ontology:nutrient } } } } }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P129
Q181394 Q79529 Q181394
USER
Which nutrients do max number of chemical substances or nutrients collaborate with ?
(c(Q79529)|c(Q181394),P129,c(Q181394))
action argmax
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( MAX ( ?p ) AS ?s ) { SELECT DISTINCT ?o ( COUNT ( ?j ) AS ?p ) WHERE { ?j rdf:type ?w . VALUES ( ?w ) { ( ontology:Q79529 ) ( ontology:Q181394 ) } } GROUP BY ?o } } . { SELECT DISTINCT ?f ( COUNT ( ?h ) AS ?x ) WHERE { VALUES ( ?a ) { ( ontology:Q79529 ) ( ontology:Q181394 ) } . ?h rdf:type ?a } GROUP BY ?f } . FILTER ( ?x = ?s ) }
action argmax
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( MAX ( ?p ) AS ?s ) { SELECT DISTINCT ?o ( COUNT ( ?j ) AS ?p ) WHERE { ?j rdf:type ?w . VALUES ( ?w ) { ( ontology:chemical_substance ) ( ontology:nutrient ) } } GROUP BY ?o } } . { SELECT DISTINCT ?f ( COUNT ( ?h ) AS ?x ) WHERE { VALUES ( ?a ) { ( ontology:chemical_substance ) ( ontology:nutrient ) } . ?h rdf:type ?a } GROUP BY ?f } . FILTER ( ?x = ?s ) }
[]
nutrient chemical substance nutrient
Q1949517
SYSTEM
5-hydroxytryptamine receptor 2A
Q1949517
(c(Q79529)|c(Q181394),P129,c(Q181394))
action argmax
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
Max number of chemical substances or nutrients collaborate with [ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( MAX ( ?p ) AS ?s ) { SELECT DISTINCT ?o ( COUNT ( ?j ) AS ?p ) WHERE { ?j rdf:type ?w . VALUES ( ?w ) { ( ontology:Q79529 ) ( ontology:Q181394 ) } } GROUP BY ?o } } . { SELECT DISTINCT ?f ( COUNT ( ?h ) AS ?x ) WHERE { VALUES ( ?a ) { ( ontology:Q79529 ) ( ontology:Q181394 ) } . ?h rdf:type ?a } GROUP BY ?f } . FILTER ( ?x = ?s ) }
5-hydroxytryptamine receptor 2A
Max number of chemical substances or nutrients collaborate with 5-hydroxytryptamine receptor 2A
5-hydroxytryptamine receptor 2A
action argmax
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( MAX ( ?p ) AS ?s ) { SELECT DISTINCT ?o ( COUNT ( ?j ) AS ?p ) WHERE { ?j rdf:type ?w . VALUES ( ?w ) { ( ontology:chemical_substance ) ( ontology:nutrient ) } } GROUP BY ?o } } . { SELECT DISTINCT ?f ( COUNT ( ?h ) AS ?x ) WHERE { VALUES ( ?a ) { ( ontology:chemical_substance ) ( ontology:nutrient ) } . ?h rdf:type ?a } GROUP BY ?f } . FILTER ( ?x = ?s ) }
[]
Verification (Boolean) (All)
Verification|3 entities, 2 direct, 2(direct) are query entities, subject is indirect
Q1949517 Q7238392 Q3008033
P129
Q8386
USER
Does that nutrient can interact with pranlukast and Cyamemazine ?
(Q1949517,P129,Q7238392) (Q1949517,P129,Q3008033)
action is_in
entity Q1949517
action intersection
action find_reverse
entity Q7238392
relation P129
action find_reverse
entity Q3008033
relation P129
['Q1949517', 'P129', 'Q7238392'] ['Q1949517', 'P129', 'Q3008033']
ASK WHERE { resource:Q1949517 property:P129 resource:Q7238392 . resource:Q1949517 property:P129 resource:Q3008033 }
5-hydroxytryptamine receptor 2A pranlukast Cyamemazine
action is_in
entity 5-hydroxytryptamine receptor 2A
action intersection
action find_reverse
entity pranlukast
relation physically interacts with
action find_reverse
entity Cyamemazine
relation physically interacts with
['5-hydroxytryptamine receptor 2A', 'physically interacts with', 'pranlukast'] ['5-hydroxytryptamine receptor 2A', 'physically interacts with', 'Cyamemazine']
ASK WHERE { resource:5-hydroxytryptamine_receptor_2A property:physically_interacts_with resource:pranlukast . resource:5-hydroxytryptamine_receptor_2A property:physically_interacts_with resource:Cyamemazine }
[]
drug
SYSTEM
NO and YES respectively
(Q1949517,P129,Q7238392) (Q1949517,P129,Q3008033)
action is_in
entity Q1949517
action intersection
action find_reverse
entity Q7238392
relation P129
action find_reverse
entity Q3008033
relation P129
[ANSWER]
['Q1949517', 'P129', 'Q7238392'] ['Q1949517', 'P129', 'Q3008033']
ASK WHERE { resource:Q1949517 property:P129 resource:Q7238392 . resource:Q1949517 property:P129 resource:Q3008033 }
NO and YES respectively
action is_in
entity 5-hydroxytryptamine receptor 2A
action intersection
action find_reverse
entity pranlukast
relation physically interacts with
action find_reverse
entity Cyamemazine
relation physically interacts with
['5-hydroxytryptamine receptor 2A', 'physically interacts with', 'pranlukast'] ['5-hydroxytryptamine receptor 2A', 'physically interacts with', 'Cyamemazine']
ASK WHERE { resource:5-hydroxytryptamine_receptor_2A property:physically_interacts_with resource:pranlukast . resource:5-hydroxytryptamine_receptor_2A property:physically_interacts_with resource:Cyamemazine }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q22312058 Q23236653
P688
Q181394
USER
How many nutrients are encoded by hypothetical protein    PP_1648 or putative DNA topoisomerase IV (subunit C)    SPy_0910 ?
(Q22312058,P688,c(Q181394)) (Q23236653,P688,c(Q181394))
action count
action union
action filter_type
action find
entity Q22312058
relation P688
type Q181394
action filter_type
action find
entity Q23236653
relation P688
type Q181394
['Q22312058', 'P688', {'concept': 'Q181394'}] ['Q23236653', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { ?z rdf:type ontology:Q181394 . resource:Q22312058 property:P688 ?z } UNION { resource:Q23236653 property:P688 ?z . ?z rdf:type ontology:Q181394 } }
hypothetical protein    PP_1648 putative DNA topoisomerase IV (subunit C)    SPy_0910
action count
action union
action filter_type
action find
entity hypothetical protein    PP_1648
relation encodes
type nutrient
action filter_type
action find
entity putative DNA topoisomerase IV (subunit C)    SPy_0910
relation encodes
type nutrient
['hypothetical protein    PP_1648', 'encodes', {'concept': 'nutrient'}] ['putative DNA topoisomerase IV (subunit C)    SPy_0910', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { ?z rdf:type ontology:nutrient . resource:hypothetical_protein____PP_1648 property:encodes ?z } UNION { resource:putative_DNA_topoisomerase_IV_(subunit_C)____SPy_0910 property:encodes ?z . ?z rdf:type ontology:nutrient } }
[]
nutrient
SYSTEM
2
Q23497504 Q22319166
(Q22312058,P688,c(Q181394)) (Q23236653,P688,c(Q181394))
action count
action union
action filter_type
action find
entity Q22312058
relation P688
type Q181394
action filter_type
action find
entity Q23236653
relation P688
type Q181394
[ANSWER]
['Q22312058', 'P688', {'concept': 'Q181394'}] ['Q23236653', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { ?z rdf:type ontology:Q181394 . resource:Q22312058 property:P688 ?z } UNION { resource:Q23236653 property:P688 ?z . ?z rdf:type ontology:Q181394 } }
putative DNA topoisomerase IV (subunit C)    SPy_0910 hypothetical protein    PP_1648
2
action count
action union
action filter_type
action find
entity hypothetical protein    PP_1648
relation encodes
type nutrient
action filter_type
action find
entity putative DNA topoisomerase IV (subunit C)    SPy_0910
relation encodes
type nutrient
['hypothetical protein    PP_1648', 'encodes', {'concept': 'nutrient'}] ['putative DNA topoisomerase IV (subunit C)    SPy_0910', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { ?z rdf:type ontology:nutrient . resource:hypothetical_protein____PP_1648 property:encodes ?z } UNION { resource:putative_DNA_topoisomerase_IV_(subunit_C)____SPy_0910 property:encodes ?z . ?z rdf:type ontology:nutrient } }
[]