Simple Question (Direct)
Simple Question
Q23065235
P682
Q1057
USER
What is the metabolic process that two-component system sensor histidine kinase    LA_1711 is involved in ?
(Q23065235,P682,c(Q1057))
action filter_type
action find
entity Q23065235
relation P682
type Q1057
['Q23065235', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q1057 . resource:Q23065235 property:P682 ?g }
two-component system sensor histidine kinase    LA_1711
action filter_type
action find
entity two-component system sensor histidine kinase    LA_1711
relation biological process
type metabolic process
['two-component system sensor histidine kinase    LA_1711', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:metabolic_process . resource:two-component_system_sensor_histidine_kinase____LA_1711 property:biological_process ?g }
[]
metabolic process
Q14863351
SYSTEM
signal transduction by protein phosphorylation
Q14863351
(Q23065235,P682,c(Q1057))
action filter_type
action find
entity Q23065235
relation P682
type Q1057
The metabolic process that two-component system sensor histidine kinase LA_1711 is involved in is cell [ANSWER]
['Q23065235', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q1057 . resource:Q23065235 property:P682 ?g }
signal transduction by protein phosphorylation
The metabolic process that two-component system sensor histidine kinase LA_1711 is involved in is cell signal transduction by protein phosphorylation
signal transduction by protein phosphorylation
action filter_type
action find
entity two-component system sensor histidine kinase    LA_1711
relation biological process
type metabolic process
['two-component system sensor histidine kinase    LA_1711', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:metabolic_process . resource:two-component_system_sensor_histidine_kinase____LA_1711 property:biological_process ?g }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23065235
P688
Q863908
USER
Which nucleic acid sequence encodes two-component system sensor histidine kinase    LA_1711 ?
(c(Q863908),P688,Q23065235)
action filter_type
action find_reverse
entity Q23065235
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23065235']
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:Q863908 . ?f property:P688 resource:Q23065235 }
two-component system sensor histidine kinase    LA_1711
action filter_type
action find_reverse
entity two-component system sensor histidine kinase    LA_1711
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'two-component system sensor histidine kinase    LA_1711']
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:nucleic_acid_sequence . ?f property:encodes resource:two-component_system_sensor_histidine_kinase____LA_1711 }
[]
nucleic acid sequence
Q23025997
SYSTEM
two-component system sensor histidine kinase    LA_1711
Q23025997
(c(Q863908),P688,Q23065235)
action filter_type
action find_reverse
entity Q23065235
relation P688
type Q863908
Two-component system sensor histidine kinase LA 1711 encodes two-component system sensor histidine kinase LA_1711
[{'concept': 'Q863908'}, 'P688', 'Q23065235']
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:Q863908 . ?f property:P688 resource:Q23065235 }
two-component system sensor histidine kinase    LA_1711
Two-component system sensor histidine kinase LA 1711 encodes two-component system sensor histidine kinase LA_1711
two-component system sensor histidine kinase    LA_1711
action filter_type
action find_reverse
entity two-component system sensor histidine kinase    LA_1711
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'two-component system sensor histidine kinase    LA_1711']
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:nucleic_acid_sequence . ?f property:encodes resource:two-component_system_sensor_histidine_kinase____LA_1711 }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23025997
P702
Q181394
USER
What is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q23025997)
action filter_type
action find_reverse
entity Q23025997
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23025997']
SELECT DISTINCT ?z WHERE { ?z property:P702 resource:Q23025997 . ?z rdf:type ontology:Q181394 }
two-component system sensor histidine kinase    LA_1711
action filter_type
action find_reverse
entity two-component system sensor histidine kinase    LA_1711
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'two-component system sensor histidine kinase    LA_1711']
SELECT DISTINCT ?z WHERE { ?z property:encoded_by resource:two-component_system_sensor_histidine_kinase____LA_1711 . ?z rdf:type ontology:nutrient }
[]
nutrient
Q23065235
SYSTEM
two-component system sensor histidine kinase    LA_1711
Q23065235
(c(Q181394),P702,Q23025997)
action filter_type
action find_reverse
entity Q23025997
relation P702
type Q181394
Two-component system sensor histidine kinase LA 1711 is encoded by that nucleic acid sequence
[{'concept': 'Q181394'}, 'P702', 'Q23025997']
SELECT DISTINCT ?z WHERE { ?z property:P702 resource:Q23025997 . ?z rdf:type ontology:Q181394 }
two-component system sensor histidine kinase    LA_1711
Two-component system sensor histidine kinase LA 1711 is encoded by that nucleic acid sequence
two-component system sensor histidine kinase    LA_1711
action filter_type
action find_reverse
entity two-component system sensor histidine kinase    LA_1711
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'two-component system sensor histidine kinase    LA_1711']
SELECT DISTINCT ?z WHERE { ?z property:encoded_by resource:two-component_system_sensor_histidine_kinase____LA_1711 . ?z rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23025997
P703
Q631147
USER
Which taxon does two-component system sensor histidine kinase    LA_1711 belong to ?
(Q23025997,P703,c(Q631147))
action filter_type
action find
entity Q23025997
relation P703
type Q631147
['Q23025997', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q23025997 property:P703 ?d . ?d rdf:type ontology:Q631147 }
two-component system sensor histidine kinase    LA_1711
action filter_type
action find
entity two-component system sensor histidine kinase    LA_1711
relation found in taxon
type infraspecific name
['two-component system sensor histidine kinase    LA_1711', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:two-component_system_sensor_histidine_kinase____LA_1711 property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21065229
SYSTEM
Leptospira interrogans serovar Lai str. 56601
Q21065229
(Q23025997,P703,c(Q631147))
action filter_type
action find
entity Q23025997
relation P703
type Q631147
Two-component system sensor histidine kinase LA_1711 belongs to [ANSWER]
['Q23025997', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q23025997 property:P703 ?d . ?d rdf:type ontology:Q631147 }
Leptospira interrogans serovar Lai str. 56601
Two-component system sensor histidine kinase LA_1711 belongs to Leptospira interrogans serovar Lai str. 56601
Leptospira interrogans serovar Lai str. 56601
action filter_type
action find
entity two-component system sensor histidine kinase    LA_1711
relation found in taxon
type infraspecific name
['two-component system sensor histidine kinase    LA_1711', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:two-component_system_sensor_histidine_kinase____LA_1711 property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q24133659
Q631147
USER
And also tell me about cytochrome b561    ECL_02080?
(Q24133659,P703,c(Q631147))
action filter_type
action find
entity Q24133659
relation P703
type Q631147
['Q24133659', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?l WHERE { resource:Q24133659 property:P703 ?l . ?l rdf:type ontology:Q631147 }
cytochrome b561    ECL_02080
action filter_type
action find
entity cytochrome b561    ECL_02080
relation found in taxon
type infraspecific name
['cytochrome b561    ECL_02080', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?l WHERE { resource:cytochrome_b561____ECL_02080 property:found_in_taxon ?l . ?l rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102928
SYSTEM
Enterobacter cloacae subsp. cloacae ATCC 13047
Q21102928
(Q24133659,P703,c(Q631147))
action filter_type
action find
entity Q24133659
relation P703
type Q631147
[ANSWER]
['Q24133659', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?l WHERE { resource:Q24133659 property:P703 ?l . ?l rdf:type ontology:Q631147 }
Enterobacter cloacae subsp. cloacae ATCC 13047
Enterobacter cloacae subsp. cloacae ATCC 13047
action filter_type
action find
entity cytochrome b561    ECL_02080
relation found in taxon
type infraspecific name
['cytochrome b561    ECL_02080', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?l WHERE { resource:cytochrome_b561____ECL_02080 property:found_in_taxon ?l . ?l rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q1057 Q181394
USER
How many metabolic processes are approximately 2886 nutrients involved in ?
(c(Q181394),P682,c(Q1057))
action count
action approx
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
value 2886
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ?h ( COUNT ( ?c ) AS ?i ) WHERE { ?c property:P682 ?h . ?h rdf:type ontology:Q1057 . ?c rdf:type ontology:Q181394 } GROUP BY ?h } . FILTER ( ?i = 2886 ) }
action count
action approx
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
value 2886
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ?h ( COUNT ( ?c ) AS ?i ) WHERE { ?c property:biological_process ?h . ?h rdf:type ontology:metabolic_process . ?c rdf:type ontology:nutrient } GROUP BY ?h } . FILTER ( ?i = 2886 ) }
[]
metabolic process nutrient
SYSTEM
3
Q14863351 Q14762260 Q14349667
(c(Q181394),P682,c(Q1057))
action count
action approx
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
value 2886
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ?h ( COUNT ( ?c ) AS ?i ) WHERE { ?c property:P682 ?h . ?h rdf:type ontology:Q1057 . ?c rdf:type ontology:Q181394 } GROUP BY ?h } . FILTER ( ?i = 2886 ) }
signal transduction by protein phosphorylation carbohydrate metabolic process lipid metabolic process
3
action count
action approx
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
value 2886
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ?h ( COUNT ( ?c ) AS ?i ) WHERE { ?c property:biological_process ?h . ?h rdf:type ontology:metabolic_process . ?c rdf:type ontology:nutrient } GROUP BY ?h } . FILTER ( ?i = 2886 ) }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q8386 Q181394
USER
Which nutrients do approximately 35 drugs or nutrients interact with ?
(c(Q8386)|c(Q181394),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 35
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?g ) AS ?q ) WHERE { { ?g property:P129 ?o . ?o rdf:type ontology:Q181394 . ?g rdf:type ontology:Q8386 } UNION { ?g property:P129 ?o . ?g rdf:type ontology:Q181394 . ?o rdf:type ontology:Q181394 } } GROUP BY ?o } . FILTER ( ?q = 35 ) }
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 35
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?g ) AS ?q ) WHERE { { ?g property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient . ?g rdf:type ontology:drug } UNION { ?g property:physically_interacts_with ?o . ?g rdf:type ontology:nutrient . ?o rdf:type ontology:nutrient } } GROUP BY ?o } . FILTER ( ?q = 35 ) }
[]
nutrient drug nutrient
Q2034004 Q21108118 Q21115043
SYSTEM
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2C, 5-hydroxytryptamine receptor 1A
Q287961 Q21108118 Q21115043 Q2034004
(c(Q8386)|c(Q181394),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 35
Approximately 35 drugs or nutrients interact with [ANSWERS]
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?g ) AS ?q ) WHERE { { ?g property:P129 ?o . ?o rdf:type ontology:Q181394 . ?g rdf:type ontology:Q8386 } UNION { ?g property:P129 ?o . ?g rdf:type ontology:Q181394 . ?o rdf:type ontology:Q181394 } } GROUP BY ?o } . FILTER ( ?q = 35 ) }
Beta-2 adrenergic receptor 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1A D(2) dopamine receptor
Approximately 35 drugs or nutrients interact with D(2) dopamine receptor, 5-hydroxytryptamine receptor 2C and 5-hydroxytryptamine receptor 1A
D(2) dopamine receptor 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1A
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 35
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?g ) AS ?q ) WHERE { { ?g property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient . ?g rdf:type ontology:drug } UNION { ?g property:physically_interacts_with ?o . ?g rdf:type ontology:nutrient . ?o rdf:type ontology:nutrient } } GROUP BY ?o } . FILTER ( ?q = 35 ) }
[]