Simple Question (Direct)
Simple Question
Q27548159
P682
Q2996394
USER
What is the biological process that S-adenosylmethionine-dependent methyltransferase YHR207C is involved in ?
(Q27548159,P682,c(Q2996394))
action filter_type
action find
entity Q27548159
relation P682
type Q2996394
['Q27548159', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?i WHERE { resource:Q27548159 property:P682 ?i . ?i rdf:type ontology:Q2996394 }
S-adenosylmethionine-dependent methyltransferase YHR207C
action filter_type
action find
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation biological process
type biological process
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?i WHERE { resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:biological_process ?i . ?i rdf:type ontology:biological_process }
[]
biological process
Q518328
SYSTEM
methylation
Q518328
(Q27548159,P682,c(Q2996394))
action filter_type
action find
entity Q27548159
relation P682
type Q2996394
The biological process that S-adenosylmethionine-dependent methyltransferase YHR207 C is involved in is pid [ANSWER]
['Q27548159', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?i WHERE { resource:Q27548159 property:P682 ?i . ?i rdf:type ontology:Q2996394 }
methylation
The biological process that S-adenosylmethionine-dependent methyltransferase YHR207 C is involved in is pid methylation
methylation
action filter_type
action find
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation biological process
type biological process
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?i WHERE { resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:biological_process ?i . ?i rdf:type ontology:biological_process }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27548159
P681
Q15989253
USER
Which parts are the components of S-adenosylmethionine-dependent methyltransferase YHR207C ?
(Q27548159,P681,c(Q15989253))
action filter_type
action find
entity Q27548159
relation P681
type Q15989253
['Q27548159', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q15989253 . resource:Q27548159 property:P681 ?a }
S-adenosylmethionine-dependent methyltransferase YHR207C
action filter_type
action find
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation cell component
type part
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:part . resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:cell_component ?a }
[]
part
Q79899 Q40260
SYSTEM
cytoplasm, nucleus
Q79899 Q40260
(Q27548159,P681,c(Q15989253))
action filter_type
action find
entity Q27548159
relation P681
type Q15989253
[ANSWERS] are the components of S-adenosylmethionine-dependent methyltransferase YHR207C
['Q27548159', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q15989253 . resource:Q27548159 property:P681 ?a }
cytoplasm nucleus
Cytoplasm and nucleus are the components of S-adenosylmethionine-dependent methyltransferase YHR207C
cytoplasm nucleus
action filter_type
action find
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation cell component
type part
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:part . resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:cell_component ?a }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27548159
P688
Q863908
USER
Which nucleic acid sequence encodes S-adenosylmethionine-dependent methyltransferase YHR207C ?
(c(Q863908),P688,Q27548159)
action filter_type
action find_reverse
entity Q27548159
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27548159']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q27548159 . ?p rdf:type ontology:Q863908 }
S-adenosylmethionine-dependent methyltransferase YHR207C
action filter_type
action find_reverse
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'S-adenosylmethionine-dependent methyltransferase YHR207C']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27541004
SYSTEM
S-adenosylmethionine-dependent methyltransferase YHR207C
Q27541004
(c(Q863908),P688,Q27548159)
action filter_type
action find_reverse
entity Q27548159
relation P688
type Q863908
And [ANSWER] encodes [ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q27548159']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q27548159 . ?p rdf:type ontology:Q863908 }
S-adenosylmethionine-dependent methyltransferase YHR207C
And S-adenosylmethionine-dependent methyltransferase YHR207C encodes S-adenosylmethionine-dependent methyltransferase YHR207C
S-adenosylmethionine-dependent methyltransferase YHR207C
action filter_type
action find_reverse
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'S-adenosylmethionine-dependent methyltransferase YHR207C']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27548159
P702
Q863908
USER
What is the gene that encodes S-adenosylmethionine-dependent methyltransferase YHR207C ?
(Q27548159,P702,c(Q863908))
action filter_type
action find
entity Q27548159
relation P702
type Q863908
['Q27548159', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?p WHERE { resource:Q27548159 property:P702 ?p . ?p rdf:type ontology:Q863908 }
S-adenosylmethionine-dependent methyltransferase YHR207C
action filter_type
action find
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation encoded by
type nucleic acid sequence
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?p WHERE { resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:encoded_by ?p . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27541004
SYSTEM
S-adenosylmethionine-dependent methyltransferase YHR207C
Q27541004
(Q27548159,P702,c(Q863908))
action filter_type
action find
entity Q27548159
relation P702
type Q863908
The gene that encodes [ANSWER] is also [ANSWER]
['Q27548159', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?p WHERE { resource:Q27548159 property:P702 ?p . ?p rdf:type ontology:Q863908 }
S-adenosylmethionine-dependent methyltransferase YHR207C
The gene that encodes S-adenosylmethionine-dependent methyltransferase YHR207C is also S-adenosylmethionine-dependent methyltransferase YHR207C
S-adenosylmethionine-dependent methyltransferase YHR207C
action filter_type
action find
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation encoded by
type nucleic acid sequence
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?p WHERE { resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:encoded_by ?p . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27548159
P703
Q631147
USER
Which taxon does that nutrient belong to ?
(Q27541004,P703,c(Q631147))
action filter_type
action find
entity Q27548159
relation P703
type Q631147
['Q27541004', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?h WHERE { ?h rdf:type ontology:Q631147 . resource:Q27548159 property:P703 ?h }
S-adenosylmethionine-dependent methyltransferase YHR207C
action filter_type
action find
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation found in taxon
type infraspecific name
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?h WHERE { ?h rdf:type ontology:infraspecific_name . resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:found_in_taxon ?h }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27541004,P703,c(Q631147))
action filter_type
action find
entity Q27548159
relation P703
type Q631147
That nutrient belongs to [ANSWER]
['Q27541004', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?h WHERE { ?h rdf:type ontology:Q631147 . resource:Q27548159 property:P703 ?h }
Saccharomyces cerevisiae S288c
That nutrient belongs to Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
action filter_type
action find
entity S-adenosylmethionine-dependent methyltransferase YHR207C
relation found in taxon
type infraspecific name
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?h WHERE { ?h rdf:type ontology:infraspecific_name . resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:found_in_taxon ?h }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q27510868 Q27551483
P703
Q181394
USER
Is Slo1p YER180C-A found in that infraspecific name ?
(Q27551483,P703,Q27510868)
action is_in
entity Q27510868
action find
entity Q27551483
relation P703
['Q27551483', 'P703', 'Q27510868']
ASK WHERE { resource:Q27551483 property:P703 resource:Q27510868 }
Saccharomyces cerevisiae S288c Slo1p YER180C-A
action is_in
entity Saccharomyces cerevisiae S288c
action find
entity Slo1p YER180C-A
relation found in taxon
['Slo1p YER180C-A', 'found in taxon', 'Saccharomyces cerevisiae S288c']
ASK WHERE { resource:Slo1p_YER180C-A property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c }
[]
nutrient
SYSTEM
YES
(Q27551483,P703,Q27510868)
action is_in
entity Q27510868
action find
entity Q27551483
relation P703
[ANSWER]
['Q27551483', 'P703', 'Q27510868']
ASK WHERE { resource:Q27551483 property:P703 resource:Q27510868 }
Yes
action is_in
entity Saccharomyces cerevisiae S288c
action find
entity Slo1p YER180C-A
relation found in taxon
['Slo1p YER180C-A', 'found in taxon', 'Saccharomyces cerevisiae S288c']
ASK WHERE { resource:Slo1p_YER180C-A property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q27541004 Q16973917 Q5024890
P703
Q631147
USER
Is S-adenosylmethionine-dependent methyltransferase YHR207C found in Acer campestre 'Puncticulatum' and Cam sành ?
(Q27541004,P703,Q16973917) (Q27541004,P703,Q5024890)
action is_in
entity Q27541004
action intersection
action find_reverse
entity Q16973917
relation P703
action find_reverse
entity Q5024890
relation P703
['Q27541004', 'P703', 'Q16973917'] ['Q27541004', 'P703', 'Q5024890']
ASK WHERE { resource:Q27541004 property:P703 resource:Q5024890 . resource:Q27541004 property:P703 resource:Q16973917 }
S-adenosylmethionine-dependent methyltransferase YHR207C Acer campestre 'Puncticulatum' Cam sành
action is_in
entity S-adenosylmethionine-dependent methyltransferase YHR207C
action intersection
action find_reverse
entity Acer campestre 'Puncticulatum'
relation found in taxon
action find_reverse
entity Cam sành
relation found in taxon
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'found in taxon', "Acer campestre 'Puncticulatum'"] ['S-adenosylmethionine-dependent methyltransferase YHR207C', 'found in taxon', 'Cam sành']
ASK WHERE { resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:found_in_taxon resource:Cam_sành . resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:found_in_taxon resource:Acer_campestre_'Puncticulatum' }
[]
infraspecific name
SYSTEM
NO
(Q27541004,P703,Q16973917) (Q27541004,P703,Q5024890)
action is_in
entity Q27541004
action intersection
action find_reverse
entity Q16973917
relation P703
action find_reverse
entity Q5024890
relation P703
[ANSWER]
['Q27541004', 'P703', 'Q16973917'] ['Q27541004', 'P703', 'Q5024890']
ASK WHERE { resource:Q27541004 property:P703 resource:Q5024890 . resource:Q27541004 property:P703 resource:Q16973917 }
No
action is_in
entity S-adenosylmethionine-dependent methyltransferase YHR207C
action intersection
action find_reverse
entity Acer campestre 'Puncticulatum'
relation found in taxon
action find_reverse
entity Cam sành
relation found in taxon
['S-adenosylmethionine-dependent methyltransferase YHR207C', 'found in taxon', "Acer campestre 'Puncticulatum'"] ['S-adenosylmethionine-dependent methyltransferase YHR207C', 'found in taxon', 'Cam sành']
ASK WHERE { resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:found_in_taxon resource:Cam_sành . resource:S-adenosylmethionine-dependent_methyltransferase_YHR207C property:found_in_taxon resource:Acer_campestre_'Puncticulatum' }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q220599 Q518328
P682 P681
Q181394
USER
Which nutrients are involved in the biologicail process methylation and have cytosol as cell component ?
AND((c(Q181394),P682,Q518328), (c(Q181394),P681,Q220599))
action filter_type
action intersection
action find_reverse
entity Q518328
relation P682
action find_reverse
entity Q220599
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P682', 'Q518328'], [{'concept': 'Q181394'}, 'P681', 'Q220599']]}
SELECT DISTINCT ?t WHERE { ?t property:P682 resource:Q518328 . ?t property:P681 resource:Q220599 . ?t rdf:type ontology:Q181394 }
cytosol methylation
action filter_type
action intersection
action find_reverse
entity methylation
relation biological process
action find_reverse
entity cytosol
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'biological process', 'methylation'], [{'concept': 'nutrient'}, 'cell component', 'cytosol']]}
SELECT DISTINCT ?t WHERE { ?t property:biological_process resource:methylation . ?t property:cell_component resource:cytosol . ?t rdf:type ontology:nutrient }
[]
nutrient
Q21493967 Q27549376 Q23483697 Q23586870 Q23599591 Q21493943 Q14863661 Q23483440 Q23572094 Q27547600
SYSTEM
Some of them are S-methylmethionine--homocysteine S-methyltransferase BHMT2, N-terminal protein methyltransferase YBR261C, cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domain-containing protein    DR_0603, 5-methyltetrahydrofolate--homocysteine S-methyltransferase, cobalamin-dependent    GSU2921, exogenous DNA processing protein YhiR    SO_4659, Betaine--homocysteine S-methyltransferase 1, Catechol O-methyltransferase, 16S rRNA m5C967 methyltransferase    DR_2168, precorrin methylase    gvip349, hypothetical protein YMR321C
Q21131677 Q23483440 Q23485923 Q23528876 Q22680176 Q21118275 Q23630314 Q23598733 Q21115522 Q22676917 Q23633962 Q23529842 Q21201642 Q21132713 Q23459520 Q21131670 Q23448412 Q27552362 Q27549376 Q21981673 Q23446258 Q23569102 Q21493943 Q411541 Q24100660 Q23447601 Q22990338 Q21499458 Q23550611 Q21105038 Q21757684 Q21761305 Q23460589 Q21981678 Q22233919 Q21172348 Q21123004 Q23460456 Q23446863 Q21758908 Q23551483 Q21981666 Q21981665 Q24099574 Q23479264 Q27754452 Q22233846 Q21131695 Q1085773 Q21127233 Q21173200 Q21119025 Q23446878 Q22678377 Q21981173 Q23448257 Q23445811 Q21981670 Q21981672 Q21493967 Q21981677 Q21131660 Q21131666 Q23474608 Q21112944 Q21758641 Q21114308 Q23595845 Q22676802 Q21131689 Q27753697 Q23480369 Q21135154 Q23599591 Q6534032 Q27552223 Q21990284 Q21985994 Q22679376 Q21983001 Q2737583 Q23067287 Q23459920 Q24224722 Q23459592 Q22679798 Q27552939 Q24253373 Q22233828 Q23512183 Q23473578 Q23446508 Q21982926 Q22233145 Q27550452 Q22235233 Q21172588 Q23528438 Q23477856 Q21497204 Q408303 Q21173916 Q21496981 Q24219726 Q23494397 Q23495438 Q22235046 Q14863661 Q21118727 Q27550230 Q21111099 Q24098630 Q21990632 Q23551130 Q27551299 Q21131652 Q23586870 Q23483697 Q27548625 Q23551659 Q23485533 Q21115537 Q24253304 Q21172649 Q23496081 Q27547600 Q27551766 Q94307 Q23512021 Q27552341 Q27549112 Q22231774 Q23434773 Q23460075 Q23568651 Q23483806 Q23596118 Q23572094 Q27549269 Q21130994 Q27549027 Q14876926 Q23064366 Q21985891 Q418781
AND((c(Q181394),P682,Q518328), (c(Q181394),P681,Q220599))
action filter_type
action intersection
action find_reverse
entity Q518328
relation P682
action find_reverse
entity Q220599
relation P681
type Q181394
[ANSWERS]
{'AND': [[{'concept': 'Q181394'}, 'P682', 'Q518328'], [{'concept': 'Q181394'}, 'P681', 'Q220599']]}
SELECT DISTINCT ?t WHERE { ?t property:P682 resource:Q518328 . ?t property:P681 resource:Q220599 . ?t rdf:type ontology:Q181394 }
Protein arginine N-methyltransferase 6 16S rRNA m5C967 methyltransferase    DR_2168 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    DR_0748 methylcobalamin:coenzyme M methyltransferase    CLC_1531 Carnosine N-methyltransferase HemK methyltransferase family member 2 methyltransferase or Fe-S oxidoreductase    RB10442 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    SO_3934 Betaine--homocysteine S-methyltransferase 1 Calmodulin-lysine N-methyltransferase B12-dependent methionine synthase    RB9857 precorrin-3B C(17)-methyltransferase    CLC_1005 Protein arginine N-methyltransferase 1 S-adenosylmethionine synthase isoform type-2 precorrin-3B C17-methyltransferase    FN0951 Protein arginine N-methyltransferase 2 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase    CBU_2048 mRNA (guanine-N7)-methyltransferase YBR236C N-terminal protein methyltransferase YBR261C Protein arginine N-methyltransferase 7 hypothetical protein    HI0380 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    glr4181 Betaine--homocysteine S-methyltransferase 1 Phenylethanolamine N-methyltransferase hypothetical protein    XCC2696 16S rRNA m5C967 methyltransferase    CBU_1915 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase    PA1927 Alkylated DNA repair protein alkB homolog 8 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase    THEYE_A0504 Protein-L-isoaspartate(D-aspartate) O-methyltransferase cell division protein FtsJ    PA4752 hypothetical protein    PA5019 tetracenomycin polyketide synthesis O-methyltransferase TcmP    FN0984 Protein arginine N-methyltransferase 2 S-adenosylmethionine-dependent methyltransferase    Rv3399 Acetylserotonin O-methyltransferase Methionine synthase reductase 16S rRNA (cytosine(967)-C(5))-methyltransferase    FN0313 RNA methyltransferase    CBU_1131 hypothetical protein    PA1860 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    THEYE_A1976 Protein arginine N-methyltransferase 8 Protein arginine N-methyltransferase 6 Sun protein    XCC3747 tRNA (uracil-5-)-methyltransferase Gid    SAOUHSC_01223 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase    SCO0985 O-methyltransferase    Rv1153c Protein arginine N-methyltransferase 7 Histamine N-methyltransferase N-lysine methyltransferase SMYD2 Nicotinamide N-methyltransferase Glutathione S-transferase omega-1 23S rRNA Um2552 2'-O-methyltransferase    CBU_1353 Arsenite methyltransferase Small RNA 2'-O-methyltransferase 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    CBU_0986 hypothetical protein    HI0441 Protein arginine N-methyltransferase 5 Protein arginine N-methyltransferase 3 S-methylmethionine--homocysteine S-methyltransferase BHMT2 Protein arginine N-methyltransferase 1 Multifunctional methyltransferase subunit TRM112-like protein Protein arginine N-methyltransferase 3 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    Caur_2072 Histone-arginine methyltransferase CARM1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    PA4936 Diphthine methyl ester synthase 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    aq_1890 Thymidylate synthase Protein arginine N-methyltransferase 8 bifunctional CbiGH    SCO1857 hypothetical protein    SAOUHSC_02245 tRNA wybutosine-synthesizing protein 4 exogenous DNA processing protein YhiR    SO_4659 Leucine carboxyl methyltransferase 1 S-adenosylmethionine-homocysteine S-methyltransferase MHT1 YLL062C tRNA wybutosine-synthesizing protein 4 Indolethylamine N-methyltransferase S-methyl-5'-thioadenosine phosphorylase Carnosine N-methyltransferase Methionine synthase precorrin methylase    LB_157 tetracenomycin polyketide synthesis O-methyltransferase TcmP    FN0388 blr7467    blr7467 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB    FN1519 Glycine N-methyltransferase 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase YER091C 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase    lmo1681 hypothetical protein    Rv2751 5-methyltetrahydrofolate--homocysteine methyltransferase    BC4250 methionine synthase    Caur_3914 rRNA methylase    HI0424 DNA (cytosine-5)-methyltransferase 3-like benzoquinone methyltransferase    Rv0560c protein-arginine omega-N methyltransferase HMT1 YBR034C hypothetical protein    Rv1597 Indolethylamine N-methyltransferase methylcobalamin:coenzyme M methyltransferase    CLC_1525 16S rRNA (cytosine(967)-C(5))-methyltransferase    SAOUHSC_01184 Histone-arginine methyltransferase CARM1 Guanidinoacetate N-methyltransferase Trimethylguanosine synthase Arsenite methyltransferase transcriptional regulator    bll8171 tRNA (uracil-5-)-methyltransferase Gid    spr0844 tRNA (guanosine-2'-O-)-methyltransferase    spr1311 S-adenosylmethionine-dependent methyltransferase    Rv0146 Catechol O-methyltransferase S-adenosylmethionine synthase isoform type-1 protein arginine N-methyltransferase YBR133C Methionine adenosyltransferase 2 subunit beta tRNA/rRNA methyltransferase    XCC3165 N-lysine methyltransferase SMYD2 TrmH family RNA methyltransferase    THEYE_A1674 tRNA methyltransferase PPM2 YOL141W Alkylated DNA repair protein alkB homolog 8 5-methyltetrahydrofolate--homocysteine S-methyltransferase, cobalamin-dependent    GSU2921 cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domain-containing protein    DR_0603 protein-lysine N-methyltransferase YBR030W DNA methyltransferase C1    THEYE_A0380 B12-dependent methionine synthase    DR_0966 S-methylmethionine--homocysteine S-methyltransferase BHMT2 AraC family transcriptional regulator    lmo2243 Adenosylhomocysteinase rRNA methylase    spr1579 hypothetical protein YMR321C S-adenosylmethionine-homocysteine S-methyltransferase SAM4 YPL273W Thiopurine S-methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase    BC4003 cytochrome c lysine N-methyltransferase YHR109W Tmt1p YER175C hypothetical protein    Rv0725c ada regulatory protein    VCA1018 tRNA (uracil-5-)-methyltransferase Gid    FN1070 methyltransferase    glr2140 RNA methyltransferase    DR_0576 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase    aq_1710 precorrin methylase    gvip349 histone methyltransferase SET2 YJL168C Protein arginine N-methyltransferase 5 leucine carboxy methyltransferase YDR435C Methionine synthase B12-dependent methionine synthase    LB_108 Nicotinamide N-methyltransferase Catechol O-methyltransferase
16S rRNA m5C967 methyltransferase DR 2168, precorrin methylase gvip349 and hypothetical protein YMR321C are involved in the biologicail process methylation and have cytosol as cell component
S-methylmethionine--homocysteine S-methyltransferase BHMT2 N-terminal protein methyltransferase YBR261C cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domain-containing protein    DR_0603 5-methyltetrahydrofolate--homocysteine S-methyltransferase, cobalamin-dependent    GSU2921 exogenous DNA processing protein YhiR    SO_4659 Betaine--homocysteine S-methyltransferase 1 Catechol O-methyltransferase 16S rRNA m5C967 methyltransferase    DR_2168 precorrin methylase    gvip349 hypothetical protein YMR321C
action filter_type
action intersection
action find_reverse
entity methylation
relation biological process
action find_reverse
entity cytosol
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'biological process', 'methylation'], [{'concept': 'nutrient'}, 'cell component', 'cytosol']]}
SELECT DISTINCT ?t WHERE { ?t property:biological_process resource:methylation . ?t property:cell_component resource:cytosol . ?t rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21493967
P680
Q44424
USER
Which the chemical bonds that represents the molecular function of S-methylmethionine--homocysteine S-methyltransferase BHMT2 ?
(Q21493967,P680,c(Q44424))
action filter_type
action find
entity Q21493967
relation P680
type Q44424
['Q21493967', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q44424 . resource:Q21493967 property:P680 ?b }
S-methylmethionine--homocysteine S-methyltransferase BHMT2
action filter_type
action find
entity S-methylmethionine--homocysteine S-methyltransferase BHMT2
relation molecular function
type chemical bond
['S-methylmethionine--homocysteine S-methyltransferase BHMT2', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:chemical_bond . resource:S-methylmethionine--homocysteine_S-methyltransferase_BHMT2 property:molecular_function ?b }
[]
chemical bond
Q14633865 Q13667380
SYSTEM
zinc ion binding, metal ion binding
Q14633865 Q13667380
(Q21493967,P680,c(Q44424))
action filter_type
action find
entity Q21493967
relation P680
type Q44424
Represents The [ANSWERS]
['Q21493967', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q44424 . resource:Q21493967 property:P680 ?b }
zinc ion binding metal ion binding
Represents The zinc ion binding and metal ion binding
zinc ion binding metal ion binding
action filter_type
action find
entity S-methylmethionine--homocysteine S-methyltransferase BHMT2
relation molecular function
type chemical bond
['S-methylmethionine--homocysteine S-methyltransferase BHMT2', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:chemical_bond . resource:S-methylmethionine--homocysteine_S-methyltransferase_BHMT2 property:molecular_function ?b }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23457988
Q44424
USER
And also tell me about 1-deoxy-D-xylulose-5-phosphate synthase    BT_4099?
(Q23457988,P680,c(Q44424))
action filter_type
action find
entity Q23457988
relation P680
type Q44424
['Q23457988', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?e WHERE { resource:Q23457988 property:P680 ?e . ?e rdf:type ontology:Q44424 }
1-deoxy-D-xylulose-5-phosphate synthase    BT_4099
action filter_type
action find
entity 1-deoxy-D-xylulose-5-phosphate synthase    BT_4099
relation molecular function
type chemical bond
['1-deoxy-D-xylulose-5-phosphate synthase    BT_4099', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?e WHERE { resource:1-deoxy-D-xylulose-5-phosphate_synthase____BT_4099 property:molecular_function ?e . ?e rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380 Q14860850
SYSTEM
metal ion binding, magnesium ion binding
Q13667380 Q14860850
(Q23457988,P680,c(Q44424))
action filter_type
action find
entity Q23457988
relation P680
type Q44424
[ANSWERS]
['Q23457988', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?e WHERE { resource:Q23457988 property:P680 ?e . ?e rdf:type ontology:Q44424 }
metal ion binding magnesium ion binding
metal ion binding magnesium ion binding
action filter_type
action find
entity 1-deoxy-D-xylulose-5-phosphate synthase    BT_4099
relation molecular function
type chemical bond
['1-deoxy-D-xylulose-5-phosphate synthase    BT_4099', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?e WHERE { resource:1-deoxy-D-xylulose-5-phosphate_synthase____BT_4099 property:molecular_function ?e . ?e rdf:type ontology:chemical_bond }
[]