Simple Question (Direct)
Simple Question
Q27741933
P682
Q1057
USER
Which metabolic process is NAD-binding protein    MSMEG_2496 involved in ?
(Q27741933,P682,c(Q1057))
action filter_type
action find
entity Q27741933
relation P682
type Q1057
['Q27741933', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?w WHERE { resource:Q27741933 property:P682 ?w . ?w rdf:type ontology:Q1057 }
NAD-binding protein    MSMEG_2496
action filter_type
action find
entity NAD-binding protein    MSMEG_2496
relation biological process
type metabolic process
['NAD-binding protein    MSMEG_2496', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?w WHERE { resource:NAD-binding_protein____MSMEG_2496 property:biological_process ?w . ?w rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q27741933,P682,c(Q1057))
action filter_type
action find
entity Q27741933
relation P682
type Q1057
The [ANSWER] is NAD-binding protein MSMEG_2496 involved in
['Q27741933', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?w WHERE { resource:Q27741933 property:P682 ?w . ?w rdf:type ontology:Q1057 }
oxidation-reduction process
The oxidation-reduction process is NAD-binding protein MSMEG_2496 involved in
oxidation-reduction process
action filter_type
action find
entity NAD-binding protein    MSMEG_2496
relation biological process
type metabolic process
['NAD-binding protein    MSMEG_2496', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?w WHERE { resource:NAD-binding_protein____MSMEG_2496 property:biological_process ?w . ?w rdf:type ontology:metabolic_process }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27741933
P702
Q863908
USER
What encodes NAD-binding protein    MSMEG_2496 ?
(Q27741933,P702,c(Q863908))
action filter_type
action find
entity Q27741933
relation P702
type Q863908
['Q27741933', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?h WHERE { resource:Q27741933 property:P702 ?h . ?h rdf:type ontology:Q863908 }
NAD-binding protein    MSMEG_2496
action filter_type
action find
entity NAD-binding protein    MSMEG_2496
relation encoded by
type nucleic acid sequence
['NAD-binding protein    MSMEG_2496', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?h WHERE { resource:NAD-binding_protein____MSMEG_2496 property:encoded_by ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23266147
SYSTEM
NAD-binding protein    MSMEG_2496
Q23266147
(Q27741933,P702,c(Q863908))
action filter_type
action find
entity Q27741933
relation P702
type Q863908
En NAD-binding protein MSMEG 2496 encodes NAD-binding protein MSMEG_2496
['Q27741933', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?h WHERE { resource:Q27741933 property:P702 ?h . ?h rdf:type ontology:Q863908 }
NAD-binding protein    MSMEG_2496
En NAD-binding protein MSMEG 2496 encodes NAD-binding protein MSMEG_2496
NAD-binding protein    MSMEG_2496
action filter_type
action find
entity NAD-binding protein    MSMEG_2496
relation encoded by
type nucleic acid sequence
['NAD-binding protein    MSMEG_2496', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?h WHERE { resource:NAD-binding_protein____MSMEG_2496 property:encoded_by ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q14349764 Q14864472
P682
Q181394
USER
How many nutrients are involved in the biologicail process oxidation-reduction process and rhythmic process ?
(c(Q181394),P682,Q14349764) (c(Q181394),P682,Q14864472)
action count
action intersection
action filter_type
action find_reverse
entity Q14349764
relation P682
type Q181394
action filter_type
action find_reverse
entity Q14864472
relation P682
type Q181394
[{'concept': 'Q181394'}, 'P682', 'Q14349764'] [{'concept': 'Q181394'}, 'P682', 'Q14864472']
SELECT DISTINCT ( COUNT ( ?o ) AS ?w ) WHERE { ?o property:P682 resource:Q14349764 . ?o rdf:type ontology:Q181394 . ?o property:P682 resource:Q14864472 . ?o rdf:type ontology:Q181394 }
oxidation-reduction process rhythmic process
action count
action intersection
action filter_type
action find_reverse
entity oxidation-reduction process
relation biological process
type nutrient
action filter_type
action find_reverse
entity rhythmic process
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', 'oxidation-reduction process'] [{'concept': 'nutrient'}, 'biological process', 'rhythmic process']
SELECT DISTINCT ( COUNT ( ?o ) AS ?w ) WHERE { ?o property:biological_process resource:oxidation-reduction_process . ?o rdf:type ontology:nutrient . ?o property:biological_process resource:rhythmic_process . ?o rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
10
Q21113093 Q21985613 Q21985614 Q21987124 Q21495556 Q21495555 Q21130767 Q21130765 Q21114790 Q21114793
(c(Q181394),P682,Q14349764) (c(Q181394),P682,Q14864472)
action count
action intersection
action filter_type
action find_reverse
entity Q14349764
relation P682
type Q181394
action filter_type
action find_reverse
entity Q14864472
relation P682
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P682', 'Q14349764'] [{'concept': 'Q181394'}, 'P682', 'Q14864472']
SELECT DISTINCT ( COUNT ( ?o ) AS ?w ) WHERE { ?o property:P682 resource:Q14349764 . ?o rdf:type ontology:Q181394 . ?o property:P682 resource:Q14864472 . ?o rdf:type ontology:Q181394 }
Lysine-specific demethylase 5B Lysine-specific demethylase 5C Lysine-specific demethylase 5B Lysine-specific demethylase 5A Ecto-NOX disulfide-thiol exchanger 2 Ecto-NOX disulfide-thiol exchanger 1 Ecto-NOX disulfide-thiol exchanger 1 Ecto-NOX disulfide-thiol exchanger 2 Lysine-specific demethylase 5A Lysine-specific demethylase 5C
10
action count
action intersection
action filter_type
action find_reverse
entity oxidation-reduction process
relation biological process
type nutrient
action filter_type
action find_reverse
entity rhythmic process
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', 'oxidation-reduction process'] [{'concept': 'nutrient'}, 'biological process', 'rhythmic process']
SELECT DISTINCT ( COUNT ( ?o ) AS ?w ) WHERE { ?o property:biological_process resource:oxidation-reduction_process . ?o rdf:type ontology:nutrient . ?o property:biological_process resource:rhythmic_process . ?o rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23228398 Q27741933
P703
Q631147
USER
Which infraspecific names are the taxon to which NAD-binding protein    MSMEG_2496 or arsenate reductase    BMAA2113 belongs to ?
OR((Q27741933,P703,c(Q631147)), (Q23228398,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27741933
relation P703
action find
entity Q23228398
relation P703
type Q631147
{'OR': [['Q27741933', 'P703', {'concept': 'Q631147'}], ['Q23228398', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q631147 . { VALUES ( ?o ) { ( resource:Q27741933 ) ( resource:Q23228398 ) } . ?o property:P703 ?w } }
arsenate reductase    BMAA2113 NAD-binding protein    MSMEG_2496
action filter_type
action union
action find
entity NAD-binding protein    MSMEG_2496
relation found in taxon
action find
entity arsenate reductase    BMAA2113
relation found in taxon
type infraspecific name
{'OR': [['NAD-binding protein    MSMEG_2496', 'found in taxon', {'concept': 'infraspecific name'}], ['arsenate reductase    BMAA2113', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:infraspecific_name . { VALUES ( ?o ) { ( resource:NAD-binding_protein____MSMEG_2496 ) ( resource:arsenate_reductase____BMAA2113 ) } . ?o property:found_in_taxon ?w } }
[]
infraspecific name
Q21102986 Q21102993
SYSTEM
Mycobacterium smegmatis str. MC2 155, Burkholderia mallei ATCC 23344
Q21102986 Q21102993
OR((Q27741933,P703,c(Q631147)), (Q23228398,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27741933
relation P703
action find
entity Q23228398
relation P703
type Q631147
[ANSWERS] are the taxon to which NAD-binding protein MSMEG_2496 or arsenate reductase BMAA2113 belongs to
{'OR': [['Q27741933', 'P703', {'concept': 'Q631147'}], ['Q23228398', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q631147 . { VALUES ( ?o ) { ( resource:Q27741933 ) ( resource:Q23228398 ) } . ?o property:P703 ?w } }
Mycobacterium smegmatis str. MC2 155 Burkholderia mallei ATCC 23344
Mycobacterium smegmatis str. MC2 155 and Burkholderia mallei ATCC 23344 are the taxon to which NAD-binding protein MSMEG_2496 or arsenate reductase BMAA2113 belongs to
Mycobacterium smegmatis str. MC2 155 Burkholderia mallei ATCC 23344
action filter_type
action union
action find
entity NAD-binding protein    MSMEG_2496
relation found in taxon
action find
entity arsenate reductase    BMAA2113
relation found in taxon
type infraspecific name
{'OR': [['NAD-binding protein    MSMEG_2496', 'found in taxon', {'concept': 'infraspecific name'}], ['arsenate reductase    BMAA2113', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:infraspecific_name . { VALUES ( ?o ) { ( resource:NAD-binding_protein____MSMEG_2496 ) ( resource:arsenate_reductase____BMAA2113 ) } . ?o property:found_in_taxon ?w } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Logical operators
Q27741933
P682
Q1057 Q3249551
USER
How many metabolic processes or processes are NAD-binding protein    MSMEG_2496 involved in ?
(Q27741933,P682,c(Q1057)) (Q27741933,P682,c(Q3249551))
action count
action union
action filter_type
action find
entity Q27741933
relation P682
type Q1057
action filter_type
action find
entity Q27741933
relation P682
type Q3249551
['Q27741933', 'P682', {'concept': 'Q1057'}] ['Q27741933', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?c ) WHERE { { ?l rdf:type ontology:Q1057 . resource:Q27741933 property:P682 ?l } UNION { resource:Q27741933 property:P682 ?l . ?l rdf:type ontology:Q3249551 } }
NAD-binding protein    MSMEG_2496
action count
action union
action filter_type
action find
entity NAD-binding protein    MSMEG_2496
relation biological process
type metabolic process
action filter_type
action find
entity NAD-binding protein    MSMEG_2496
relation biological process
type process
['NAD-binding protein    MSMEG_2496', 'biological process', {'concept': 'metabolic process'}] ['NAD-binding protein    MSMEG_2496', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?c ) WHERE { { ?l rdf:type ontology:metabolic_process . resource:NAD-binding_protein____MSMEG_2496 property:biological_process ?l } UNION { resource:NAD-binding_protein____MSMEG_2496 property:biological_process ?l . ?l rdf:type ontology:process } }
[]
metabolic process process
SYSTEM
2
Q14349764 Q1057
(Q27741933,P682,c(Q1057)) (Q27741933,P682,c(Q3249551))
action count
action union
action filter_type
action find
entity Q27741933
relation P682
type Q1057
action filter_type
action find
entity Q27741933
relation P682
type Q3249551
[ANSWER]
['Q27741933', 'P682', {'concept': 'Q1057'}] ['Q27741933', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?c ) WHERE { { ?l rdf:type ontology:Q1057 . resource:Q27741933 property:P682 ?l } UNION { resource:Q27741933 property:P682 ?l . ?l rdf:type ontology:Q3249551 } }
oxidation-reduction process metabolic process
2
action count
action union
action filter_type
action find
entity NAD-binding protein    MSMEG_2496
relation biological process
type metabolic process
action filter_type
action find
entity NAD-binding protein    MSMEG_2496
relation biological process
type process
['NAD-binding protein    MSMEG_2496', 'biological process', {'concept': 'metabolic process'}] ['NAD-binding protein    MSMEG_2496', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?c ) WHERE { { ?l rdf:type ontology:metabolic_process . resource:NAD-binding_protein____MSMEG_2496 property:biological_process ?l } UNION { resource:NAD-binding_protein____MSMEG_2496 property:biological_process ?l . ?l rdf:type ontology:process } }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23228897 Q27741933
P703
Q631147
USER
Which infraspecific names are NAD-binding protein    MSMEG_2496 or tyrosyl-tRNA synthetase    spr1910 found ?
OR((Q27741933,P703,c(Q631147)), (Q23228897,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27741933
relation P703
action find
entity Q23228897
relation P703
type Q631147
{'OR': [['Q27741933', 'P703', {'concept': 'Q631147'}], ['Q23228897', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?c WHERE { { { resource:Q27741933 property:P703 ?c } UNION { resource:Q23228897 property:P703 ?c } } . ?c rdf:type ontology:Q631147 }
tyrosyl-tRNA synthetase    spr1910 NAD-binding protein    MSMEG_2496
action filter_type
action union
action find
entity NAD-binding protein    MSMEG_2496
relation found in taxon
action find
entity tyrosyl-tRNA synthetase    spr1910
relation found in taxon
type infraspecific name
{'OR': [['NAD-binding protein    MSMEG_2496', 'found in taxon', {'concept': 'infraspecific name'}], ['tyrosyl-tRNA synthetase    spr1910', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?c WHERE { { { resource:NAD-binding_protein____MSMEG_2496 property:found_in_taxon ?c } UNION { resource:tyrosyl-tRNA_synthetase____spr1910 property:found_in_taxon ?c } } . ?c rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102986 Q21102963
SYSTEM
Mycobacterium smegmatis str. MC2 155, Streptococcus pneumoniae R6
Q21102986 Q21102963
OR((Q27741933,P703,c(Q631147)), (Q23228897,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27741933
relation P703
action find
entity Q23228897
relation P703
type Q631147
[ANSWERS] are NAD-binding protein MSMEG_2496 or tyrosyl-tRNA synthetase spr1910 found
{'OR': [['Q27741933', 'P703', {'concept': 'Q631147'}], ['Q23228897', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?c WHERE { { { resource:Q27741933 property:P703 ?c } UNION { resource:Q23228897 property:P703 ?c } } . ?c rdf:type ontology:Q631147 }
Mycobacterium smegmatis str. MC2 155 Streptococcus pneumoniae R6
Mycobacterium smegmatis str. MC2 155 and Streptococcus pneumoniae R6 are NAD-binding protein MSMEG_2496 or tyrosyl-tRNA synthetase spr1910 found
Mycobacterium smegmatis str. MC2 155 Streptococcus pneumoniae R6
action filter_type
action union
action find
entity NAD-binding protein    MSMEG_2496
relation found in taxon
action find
entity tyrosyl-tRNA synthetase    spr1910
relation found in taxon
type infraspecific name
{'OR': [['NAD-binding protein    MSMEG_2496', 'found in taxon', {'concept': 'infraspecific name'}], ['tyrosyl-tRNA synthetase    spr1910', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?c WHERE { { { resource:NAD-binding_protein____MSMEG_2496 property:found_in_taxon ?c } UNION { resource:tyrosyl-tRNA_synthetase____spr1910 property:found_in_taxon ?c } } . ?c rdf:type ontology:infraspecific_name }
[]