Simple Question (Direct)
Simple Question
Q27547476
P681
Q5058355
USER
Which are the cell components of Yos9p YDR057W ?
(Q27547476,P681,c(Q5058355))
action filter_type
action find
entity Q27547476
relation P681
type Q5058355
['Q27547476', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?q WHERE { resource:Q27547476 property:P681 ?q . ?q rdf:type ontology:Q5058355 }
Yos9p YDR057W
action filter_type
action find
entity Yos9p YDR057W
relation cell component
type cellular component
['Yos9p YDR057W', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?q WHERE { resource:Yos9p_YDR057W property:cell_component ?q . ?q rdf:type ontology:cellular_component }
[]
cellular component
Q79927 Q14329032
SYSTEM
endoplasmic reticulum, endoplasmic reticulum membrane
Q79927 Q14329032
(Q27547476,P681,c(Q5058355))
action filter_type
action find
entity Q27547476
relation P681
type Q5058355
The cell components of Yos9 p YDR057 W are in [ANSWERS]
['Q27547476', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?q WHERE { resource:Q27547476 property:P681 ?q . ?q rdf:type ontology:Q5058355 }
endoplasmic reticulum endoplasmic reticulum membrane
The cell components of Yos9 p YDR057 W are in endoplasmic reticulum and endoplasmic reticulum membrane
endoplasmic reticulum endoplasmic reticulum membrane
action filter_type
action find
entity Yos9p YDR057W
relation cell component
type cellular component
['Yos9p YDR057W', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?q WHERE { resource:Yos9p_YDR057W property:cell_component ?q . ?q rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q79927 Q14329032
P361
Q5058355
USER
Which cellular components are endoplasmic reticulum and endoplasmic reticulum membrane a part of ?
(Q79927,P361,c(Q5058355)) (Q14329032,P361,c(Q5058355))
action union
action filter_type
action find
entity Q79927
relation P361
type Q5058355
action filter_type
action find
entity Q14329032
relation P361
type Q5058355
['Q79927', 'P361', {'concept': 'Q5058355'}] ['Q14329032', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?x WHERE { { resource:Q79927 property:P361 ?x . ?x rdf:type ontology:Q5058355 } UNION { resource:Q14329032 property:P361 ?x . ?x rdf:type ontology:Q5058355 } }
endoplasmic reticulum endoplasmic reticulum membrane
action union
action filter_type
action find
entity endoplasmic reticulum
relation part of
type cellular component
action filter_type
action find
entity endoplasmic reticulum membrane
relation part of
type cellular component
['endoplasmic reticulum', 'part of', {'concept': 'cellular component'}] ['endoplasmic reticulum membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?x WHERE { { resource:endoplasmic_reticulum property:part_of ?x . ?x rdf:type ontology:cellular_component } UNION { resource:endoplasmic_reticulum_membrane property:part_of ?x . ?x rdf:type ontology:cellular_component } }
[]
cellular component
Q899827 Q21109092
SYSTEM
endomembrane system, nuclear outer membrane-endoplasmic reticulum membrane network
Q899827 Q21109092
(Q79927,P361,c(Q5058355)) (Q14329032,P361,c(Q5058355))
action union
action filter_type
action find
entity Q79927
relation P361
type Q5058355
action filter_type
action find
entity Q14329032
relation P361
type Q5058355
[ANSWERS]
['Q79927', 'P361', {'concept': 'Q5058355'}] ['Q14329032', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?x WHERE { { resource:Q79927 property:P361 ?x . ?x rdf:type ontology:Q5058355 } UNION { resource:Q14329032 property:P361 ?x . ?x rdf:type ontology:Q5058355 } }
endomembrane system nuclear outer membrane-endoplasmic reticulum membrane network
Which cellular components are endoplasmic reticulum and endoplasmic reticulum membrane a part of
endomembrane system nuclear outer membrane-endoplasmic reticulum membrane network
action union
action filter_type
action find
entity endoplasmic reticulum
relation part of
type cellular component
action filter_type
action find
entity endoplasmic reticulum membrane
relation part of
type cellular component
['endoplasmic reticulum', 'part of', {'concept': 'cellular component'}] ['endoplasmic reticulum membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?x WHERE { { resource:endoplasmic_reticulum property:part_of ?x . ?x rdf:type ontology:cellular_component } UNION { resource:endoplasmic_reticulum_membrane property:part_of ?x . ?x rdf:type ontology:cellular_component } }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q899827 Q21109092
P681
Q181394
USER
Which nutrients are those ones a cell component of ?
(c(Q181394),P681,Q899827) (c(Q181394),P681,Q21109092)
action filter_type
action find_reverse
entity prev_answer
relation P681
type Q181394
[{'concept': 'Q181394'}, 'P681', 'Q899827'] [{'concept': 'Q181394'}, 'P681', 'Q21109092']
SELECT DISTINCT ?o WHERE { ?o property:P681 ?s . VALUES ( ?s ) { ( resource:Q899827 ) ( resource:Q21109092 ) } . ?o rdf:type ontology:Q181394 }
endomembrane system nuclear outer membrane-endoplasmic reticulum membrane network
action filter_type
action find_reverse
entity prev_answer
relation cell component
type nutrient
[{'concept': 'nutrient'}, 'cell component', 'endomembrane system'] [{'concept': 'nutrient'}, 'cell component', 'nuclear outer membrane-endoplasmic reticulum membrane network']
SELECT DISTINCT ?o WHERE { ?o property:cell_component ?s . VALUES ( ?s ) { ( resource:endomembrane_system ) ( resource:nuclear_outer_membrane-endoplasmic_reticulum_membrane_network ) } . ?o rdf:type ontology:nutrient }
[]
nutrient
Q285613 Q3162114 Q14876092
SYSTEM
Serine/threonine-protein kinase mTOR, Tyrosine-protein kinase JAK2, Serine/threonine-protein kinase mTOR
Q21113783 Q21096448 Q21136558 Q21988158 Q21130580 Q21990250 Q21981233 Q21174803 Q23515324 Q21123462 Q21110724 Q27550185 Q21111820 Q23550871 Q21105464 Q14888630 Q21494741 Q6155967 Q6155969 Q21133086 Q21127080 Q21494065 Q21113626 Q21987386 Q21987388 Q21106926 Q21124712 Q5205645 Q21497476 Q21497475 Q21982978 Q21989922 Q21103125 Q21106566 Q21988191 Q27553095 Q21991605 Q21991200 Q21113274 Q21990246 Q21980258 Q410142 Q21124594 Q21990126 Q21498436 Q21433488 Q14914138 Q27550421 Q21991659 Q21990942 Q21115614 Q14914518 Q21494740 Q21111825 Q21126820 Q21126821 Q21989890 Q21989891 Q27549383 Q21122956 Q14914500 Q21159807 Q21493945 Q21157260 Q21990557 Q23454287 Q14905507 Q21496929 Q21495807 Q27551290 Q21494706 Q21174968 Q21988300 Q21123831 Q21985297 Q21981508 Q21981507 Q21981504 Q21981505 Q21981502 Q27551390 Q21135060 Q21123225 Q419973 Q21989608 Q21110867 Q21110429 Q21981486 Q21982811 Q21123464 Q21123469 Q21123468 Q21991576 Q21495843 Q21135812 Q21123476 Q21123472 Q21123471 Q21495850 Q21117115 Q21106280 Q21106271 Q27548182 Q21110458 Q21132362 Q21122383 Q21106265 Q21113814 Q21124274 Q21123458 Q21497954 Q21991522 Q15332867 Q21495871 Q21122391 Q27552306 Q21106248 Q21499285 Q22677209 Q4875406 Q21986636 Q21981095 Q21122041 Q14860827 Q21124852 Q27547901 Q21100297 Q21989289 Q21988989 Q21122038 Q21497339 Q21986613 Q21498708 Q21105466 Q21101983 Q23550506 Q21981043 Q21988437 Q21496827 Q23595761 Q21124297 Q21494641 Q21494648 Q27551270 Q21105469 Q21123722 Q21988002 Q21133720 Q21980285 Q21105471 Q21496248 Q21985381 Q21985388 Q27553070 Q24097329 Q21100273 Q21981604 Q14872730 Q21208000 Q27549623 Q21149776 Q21100612 Q27549816 Q21159785 Q21105465 Q21117636 Q21133099 Q27549829 Q21118795 Q21201413 Q21114053 Q21982734 Q21100639 Q21114060 Q27550160 Q21125813 Q27549010 Q21989342 Q21491058 Q21112484 Q21101107 Q21983873 Q27547505 Q21494696 Q21135131 Q21112493 Q21152127 Q21119366 Q21134821 Q21207645 Q21111566 Q21980067 Q21132749 Q21106724 Q21121316 Q21111570 Q3162114 Q21985638 Q21113339 Q21154237 Q21983468 Q21988775 Q21172873 Q21134819 Q21134235 Q21134237 Q21992121 Q21992124 Q21992129 Q27754891 Q27548184 Q21119556 Q21992279 Q26250377 Q21494218 Q21113548 Q21121744 Q21989077 Q23569583 Q21122718 Q21131887 Q21984178 Q21984174 Q21113340 Q21121470 Q21983880 Q21115242 Q21106350 Q285613 Q21114707 Q21154420 Q14876092 Q21173192 Q21119277 Q22679756 Q27547248 Q21985152 Q21115093 Q21115183 Q21990088 Q425649 Q27551443 Q27552028 Q21990129 Q21118092 Q21980083 Q21108579 Q27551343 Q21111483 Q21116828 Q21495391 Q23528739 Q21985842 Q21988687 Q21494497 Q21991120 Q21990056 Q21113400 Q21173700 Q21985131 Q21985130 Q21110691 Q21989089 Q21990069 Q21114279 Q21980087 Q21115138 Q21115136 Q21123446 Q21991743 Q21991742 Q21126500 Q21126503 Q21126502 Q21126509 Q21990238 Q21990230 Q21990231 Q21990236 Q21990234 Q21990235 Q21495095 Q21109510 Q21991754 Q21991753 Q21126511 Q21171850 Q21986867 Q21985850 Q27550101 Q21109749 Q21113984 Q3062781 Q21496051 Q21120855 Q21987015 Q21114891 Q21499008 Q21991786 Q21109325 Q21123455 Q21991792 Q21991790 Q21991791 Q23595928 Q21119283 Q27552358 Q21136878 Q27549579 Q27552409 Q27549562 Q21109094 Q27551349 Q21121731 Q27547594 Q27548228 Q27550674 Q27550193 Q27552050 Q27552645 Q27550717 Q27549288 Q27553226 Q21990337 Q27552390 Q27550533 Q27548702 Q21988813
(c(Q181394),P681,Q899827) (c(Q181394),P681,Q21109092)
action filter_type
action find_reverse
entity prev_answer
relation P681
type Q181394
[ANSWERS] are those ones a cell component of
[{'concept': 'Q181394'}, 'P681', 'Q899827'] [{'concept': 'Q181394'}, 'P681', 'Q21109092']
SELECT DISTINCT ?o WHERE { ?o property:P681 ?s . VALUES ( ?s ) { ( resource:Q899827 ) ( resource:Q21109092 ) } . ?o rdf:type ontology:Q181394 }
Disintegrin and metalloproteinase domain-containing protein 10 Protein FAN USP6 N-terminal-like protein Spectrin beta chain, non-erythrocytic 1 Charged multivesicular body protein 1a TBC1 domain family member 8 Cell death regulator Aven TBC1 domain family member 1 Na(+)/H(+) antiporter YjbQ    BSU11640 TBC1 domain family member 3H Membrane-associated progesterone receptor component 1 Sen15p YMR059W TBC1 domain family member 15 Na/H+ antiporter    THEYE_A0083 Cdc42 effector protein 2 Adenosine receptor A1 Microtubule-associated proteins 1A/1B light chain 3B Tyrosine-protein kinase JAK1 Tyrosine-protein kinase JAK3 Protein STX16-NPEPL1 E3 ubiquitin-protein ligase RNF167 Codanin-1 Guanine nucleotide exchange factor DBS Partitioning defective 3 homolog Partitioning defective 3 homolog B Protein transport protein Sec23B V-type proton ATPase subunit B, kidney isoform Natural resistance-associated macrophage protein 2 Intersectin-1 Dematin Disintegrin and metalloproteinase domain-containing protein 15 Protein phosphatase 1 regulatory subunit 14C Glycerophosphodiester phosphodiesterase domain-containing protein 5 Gamma-aminobutyric acid receptor-associated protein Tyrosine-protein kinase JAK1 tRNA splicing endonuclease subunit SEN2 YLR105C Reticulon-3 Sugar transporter SWEET1 Fatty-acid amide hydrolase 1 TBC1 domain family member 15 Short transient receptor potential channel 2 Sodium-dependent serotonin transporter Synaptotagmin-like protein 3 Small G protein signaling modulator 2 Acidic fibroblast growth factor intracellular-binding protein Ecotropic viral integration site 5 protein Natural resistance-associated macrophage protein 2 t-SNARE syntaxin YLR026C Synaptosomal-associated protein 47 GTPase RhebL1 Intersectin-1 Tyrosine-protein kinase JAK2 Microtubule-associated proteins 1A/1B light chain 3A Dedicator of cytokinesis protein 2 Phosphatidylinositol 4-phosphate 5-kinase type-1 beta Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma Membrane-associated phosphatidylinositol transfer protein 3 Membrane-associated phosphatidylinositol transfer protein 2 Tlg2p YOL018C WD repeat- and FYVE domain-containing protein 4 Tyrosine-protein kinase JAK3 Programmed cell death 1 ligand 2 Bcl-2-interacting killer Dematin GTP-binding protein Rheb Na+/H+ antiporter    BT_3638 Leucyl-cystinyl aminopeptidase [Protein ADP-ribosylarginine] hydrolase-like protein 1 Growth hormone-regulated TBC protein 1 Did2p YKR035W-A Lysosomal-associated transmembrane protein 4B TBC1 domain family member 9 Nuclear receptor-binding protein Sorting nexin-18 Rab GTPase-activating protein 1-like Cdc42 effector protein 5 Cdc42 effector protein 4 Cdc42 effector protein 1 Cdc42 effector protein 3 Cdc42 effector protein 2 SNAP receptor SNC2 YOR327C Vesicle-associated membrane protein 5 Rap guanine nucleotide exchange factor 3 Solute carrier family 2, facilitated glucose transporter member 4 Synaptotagmin-like protein 1 D(1A) dopamine receptor Protein MAL2 Cyclic AMP-dependent transcription factor ATF-6 beta Charged multivesicular body protein 6 TBC1 domain family member 8B TBC1 domain family member 9B TBC1 domain family member 25 WD repeat and FYVE domain-containing protein 3 Huntingtin-interacting protein 1 Tumor necrosis factor receptor superfamily member 17 TBC1 domain family member 13 TBC1 domain family member 21 TBC1 domain family member 26 Huntingtin-interacting protein 1-related protein Synaptosomal-associated protein 47 Solute carrier family 2, facilitated glucose transporter member 12 Solute carrier family 2, facilitated glucose transporter member 4 syntaxin YPL232W Tether containing UBX domain for GLUT4 Acetyl-CoA carboxylase 2 Vacuolar fusion protein MON1 homolog B Solute carrier family 2, facilitated glucose transporter member 10 Disintegrin and metalloproteinase domain-containing protein 15 Partitioning defective 3 homolog B TBC1 domain family member 4 Acetyl-CoA carboxylase 2 TBC1 domain family member 13 Type-1A angiotensin II receptor Interleukin-3 receptor subunit alpha Vacuolar fusion protein MON1 homolog A Asg7p YJL170C Growth hormone-regulated TBC protein 1 CDK5 regulatory subunit-associated protein 3 Solute carrier family 2, facilitated glucose transporter member 10 Bcl-2-interacting killer Proprotein convertase subtilisin/kexin type 5 Protein FAN RUN domain-containing protein 1 Sodium-dependent serotonin transporter Neuferricin Rho family GTPase RHO5 YNL180C Apoptosis facilitator Bcl-2-like protein 14 Vesicle-associated membrane protein 5 Rab GTPase-activating protein 1 Protein RUFY3 Charged multivesicular body protein 1a Nuclear receptor-binding protein 2 Adenosine receptor A2a Cdc42 effector protein 5 [Protein ADP-ribosylarginine] hydrolase-like protein 1 Kef-type K+ transport system membrane protein    THEYE_A1811 Small G protein signaling modulator 3 Phosphatidylinositol 4-kinase beta Rab-interacting lysosomal protein Na(+)/H(+) antiporter    aq_929 Membrane-associated phosphatidylinositol transfer protein 2 Calcium/calmodulin-dependent protein kinase type 1G Pannexin-1 Dap1p YPL170W Cdc42 effector protein 4 Pannexin-3 E3 ubiquitin-protein ligase RNF34 Neudesin V-type proton ATPase subunit B, brain isoform Cdc42 effector protein 3 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 Ras-related C3 botulinum toxin substrate 3 Glycerophosphodiester phosphodiesterase domain-containing protein 5 retromer subunit VPS17 YOR132W cation:proton antiporter    XCC2634 Bcl-2-like protein 11 Gamma-aminobutyric acid receptor-associated protein Low-density lipoprotein receptor TBC1 domain family member 8 Rtn1p YDR233C Charged multivesicular body protein 6 Codanin-1 SNAP receptor VAM3 YOR106W Small G protein signaling modulator 3 Cdc42 effector protein 1 GTP-binding protein Rheb EVI5-like protein syntaxin YMR183C Membrane-spanning 4-domains subfamily A member 3 ADP-ribosylation factor 1 Signal-induced proliferation-associated protein 1 Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma Programmed cell death 1 ligand 1 Reticulon-3 tRNA splicing endonuclease subunit SEN34 YAR008W Membrane-associated progesterone receptor component 2 Bph1p YCR032W Na(+)/H(+) exchange regulatory cofactor NHE-RF2 TBC1 domain family member 4 Phosphatidylinositol 4-kinase beta Dynamin-1-like protein Dedicator of cytokinesis protein 9 ESCRT-III subunit protein VPS24 YKL041W Lysosomal-associated transmembrane protein 4A t-SNARE domain-containing protein 1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 Proprotein convertase subtilisin/kexin type 6 Leukocyte-specific transcript 1 protein Small G protein signaling modulator 1 Nuclear receptor-binding protein E3 ubiquitin-protein ligase RNF128 Pannexin-3 Cell death regulator Aven Microtubule-associated proteins 1A/1B light chain 3A Long-chain fatty acid transport protein 1 E3 ubiquitin-protein ligase RNF34 Tyrosine-protein kinase JAK2 Leukocyte cell-derived chemotaxin 1 TBC1 domain family member 2B Proprotein convertase subtilisin/kexin type 5 Tether containing UBX domain for GLUT4 Neuferricin Fibroblast growth factor receptor substrate 2 Small G protein signaling modulator 2 TBC1 domain family member 3C TBC1 domain family member 30 TBC1 domain family member 2A TBC1 domain family member 2B TBC domain-containing protein kinase-like protein integral membrane ion exchanger    SCO5974 Rtn2p YDL204W Neurobeachin-like protein 1 USP6 N-terminal-like protein Synaptotagmin-like protein 3 Calcineurin B homologous protein 1 Calcium/calmodulin-dependent protein kinase type 1G Nuclear receptor-binding protein 2 E3 ubiquitin-protein ligase RNF167 Na/H antiporter    glr2388 Rab-interacting lysosomal protein Calcineurin B homologous protein 1 D(1A) dopamine receptor Dynamin-1-like protein Rab GTPase-activating protein 1 V-type proton ATPase subunit B, brain isoform Dedicator of cytokinesis protein 2 Syntaxin-12 ADP-ribosylation factor-like protein 6-interacting protein 1 Serine/threonine-protein kinase mTOR MAGUK p55 subfamily member 5 Ras-related C3 botulinum toxin substrate 3 Serine/threonine-protein kinase mTOR Carabin Lysosomal-associated transmembrane protein 4A Solute carrier family 2, facilitated glucose transporter member 12 Rav1p YJR033C Neudesin E3 ubiquitin-protein ligase TRIM23 GTPase RhebL1 Long-chain fatty acid transport protein 1 Low-density lipoprotein receptor SNAP receptor SNC1 YAL030W SNAP receptor PEP12 YOR036W Small G protein signaling modulator 1 Ecotropic viral integration site 5 protein homolog Membrane-associated progesterone receptor component 1 Acidic fibroblast growth factor intracellular-binding protein H(+)-transporting V1 sector ATPase subunit A YDL185W Huntingtin-interacting protein 1 Cyclic AMP-dependent transcription factor ATF-6 beta ADP-ribosylation factor-like protein 6-interacting protein 1 monovalent cation:proton antiporter-2 (CPA2) family protein    CLC_1765 Neurobeachin-like protein 2 MAGUK p55 subfamily member 5 Transmembrane glycoprotein NMB Protein transport protein Sec23B RUN domain-containing protein 1 Huntingtin-interacting protein 1-related protein Neurobeachin Vacuolar fusion protein MON1 homolog B Vacuolar fusion protein MON1 homolog A CDK5 regulatory subunit-associated protein 3 E3 ubiquitin-protein ligase RNF128 Protein RUFY3 Dedicator of cytokinesis protein 9 Membrane-associated progesterone receptor component 2 Microtubule-associated proteins 1A/1B light chain 3B Microtubule-associated proteins 1A/1B light chain 3C Sugar transporter SWEET1 Syntaxin-8 Syntaxin-7 TBC1 domain family member 10B TBC1 domain family member 10A TBC1 domain family member 22A TBC domain-containing protein kinase-like protein TBC1 domain family member 30 TBC1 domain family member 25 TBC1 domain family member 8B TBC1 domain family member 1 TBC1 domain family member 9 TBC1 domain family member 9B Phosphatidylinositol 4-phosphate 5-kinase type-1 beta TBC1 domain family member 22B Syntaxin-12 Syntaxin-17 TBC1 domain family member 2A [Protein ADP-ribosylarginine] hydrolase Sorting nexin-18 Neurobeachin tRNA splicing endonuclease subunit SEN54 YPL083C Na(+)/H(+) exchange regulatory cofactor NHE-RF2 Membrane-associated phosphatidylinositol transfer protein 3 Adenosine receptor A1 [Protein ADP-ribosylarginine] hydrolase Microtubule-associated proteins 1A/1B light chain 3 beta 2 E3 ubiquitin-protein ligase TRIM23 Leukocyte cell-derived chemotaxin 1 ADP-ribosylation factor 1 TBC1 domain family member 10A Partitioning defective 3 homolog TBC1 domain family member 3B TBC1 domain family member 22A TBC1 domain family member 10B Carabin Na(+)/H(+) antiporter    aq_415 Lysosomal-associated transmembrane protein 4B proteasome core particle subunit alpha 3 YGR135W Protein YIPF5 Scp160p YJL080C proteasome core particle subunit alpha 2 YML092C Jem1p YJL073W Ras-related protein Rab-14 enoyl-CoA hydratase PHS1 YJL097W Nuclear protein localization protein 4 homolog palmitoyltransferase SWF1 YDR126W Arf family GTPase ARL3 YPL051W proteasome core particle subunit alpha 4 YOL038W proteasome core particle subunit alpha 1 YGL011C glucosaminyl-phosphotidylinositol O-acyltransferase YJL091C Npl4p YBR170C proteasome core particle subunit alpha 7 YOR362C N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase anchoring subunit ALG14 YBR070C dolichyl-phosphate beta-D-mannosyltransferase YPR183W Protein YIPF5 proteasome core particle subunit alpha 5 YGR253C Bfr1p YOR198C proteasome core particle subunit alpha 6 YMR314W Nuclear protein localization protein 4 homolog
Serine/threonine-protein kinase mTOR, Tyrosine-protein kinase JAK2 and Serine/threonine-protein kinase mTOR are those ones a cell component of
Serine/threonine-protein kinase mTOR Tyrosine-protein kinase JAK2 Serine/threonine-protein kinase mTOR
action filter_type
action find_reverse
entity prev_answer
relation cell component
type nutrient
[{'concept': 'nutrient'}, 'cell component', 'endomembrane system'] [{'concept': 'nutrient'}, 'cell component', 'nuclear outer membrane-endoplasmic reticulum membrane network']
SELECT DISTINCT ?o WHERE { ?o property:cell_component ?s . VALUES ( ?s ) { ( resource:endomembrane_system ) ( resource:nuclear_outer_membrane-endoplasmic_reticulum_membrane_network ) } . ?o rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q285613 Q3162114 Q14876092
P681
Q5058355
USER
Which cellular components are the components of Serine/threonine-protein kinase mTOR, Tyrosine-protein kinase JAK2 and Serine/threonine-protein kinase mTOR ?
(Q285613,P681,c(Q5058355)) (Q3162114,P681,c(Q5058355)) (Q14876092,P681,c(Q5058355))
action union
action filter_type
action find
entity Q285613
relation P681
type Q5058355
action filter_type
action find
entity Q3162114
relation P681
type Q5058355
action filter_type
action find
entity Q14876092
relation P681
type Q5058355
['Q285613', 'P681', {'concept': 'Q5058355'}] ['Q3162114', 'P681', {'concept': 'Q5058355'}] ['Q14876092', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { VALUES ( ?o ) { ( resource:Q3162114 ) ( resource:Q285613 ) } . ?o property:P681 ?c }
Serine/threonine-protein kinase mTOR Tyrosine-protein kinase JAK2 Serine/threonine-protein kinase mTOR
action union
action filter_type
action find
entity Serine/threonine-protein kinase mTOR
relation cell component
type cellular component
action filter_type
action find
entity Tyrosine-protein kinase JAK2
relation cell component
type cellular component
action filter_type
action find
entity Serine/threonine-protein kinase mTOR
relation cell component
type cellular component
['Serine/threonine-protein kinase mTOR', 'cell component', {'concept': 'cellular component'}] ['Tyrosine-protein kinase JAK2', 'cell component', {'concept': 'cellular component'}] ['Serine/threonine-protein kinase mTOR', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { VALUES ( ?o ) { ( resource:Tyrosine-protein_kinase_JAK2 ) ( resource:Serine/threonine-protein_kinase_mTOR ) } . ?o property:cell_component ?c }
[]
cellular component
Q14878067 Q14329032 Q79927
SYSTEM
organelle membrane, endoplasmic reticulum membrane, endoplasmic reticulum
Q14878067 Q14329032 Q79927 Q899827 Q14876059 Q899827 Q899827 Q14329032 Q79927
(Q285613,P681,c(Q5058355)) (Q3162114,P681,c(Q5058355)) (Q14876092,P681,c(Q5058355))
action union
action filter_type
action find
entity Q285613
relation P681
type Q5058355
action filter_type
action find
entity Q3162114
relation P681
type Q5058355
action filter_type
action find
entity Q14876092
relation P681
type Q5058355
[ANSWERS] are the components of Serine/threonine-protein kinase mTOR, Tyrosine-protein kinase JAK2 and Serine/threonine-protein kinase mTOR
['Q285613', 'P681', {'concept': 'Q5058355'}] ['Q3162114', 'P681', {'concept': 'Q5058355'}] ['Q14876092', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { VALUES ( ?o ) { ( resource:Q3162114 ) ( resource:Q285613 ) } . ?o property:P681 ?c }
organelle membrane endoplasmic reticulum membrane endoplasmic reticulum endomembrane system phosphatidylinositol 3-kinase complex endomembrane system endomembrane system endoplasmic reticulum membrane endoplasmic reticulum
Organelle membrane, endoplasmic reticulum membrane and endoplasmic reticulum are the components of Serine/threonine-protein kinase mTOR, Tyrosine-protein kinase JAK2 and Serine/threonine-protein kinase mTOR
organelle membrane endoplasmic reticulum membrane endoplasmic reticulum
action union
action filter_type
action find
entity Serine/threonine-protein kinase mTOR
relation cell component
type cellular component
action filter_type
action find
entity Tyrosine-protein kinase JAK2
relation cell component
type cellular component
action filter_type
action find
entity Serine/threonine-protein kinase mTOR
relation cell component
type cellular component
['Serine/threonine-protein kinase mTOR', 'cell component', {'concept': 'cellular component'}] ['Tyrosine-protein kinase JAK2', 'cell component', {'concept': 'cellular component'}] ['Serine/threonine-protein kinase mTOR', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { VALUES ( ?o ) { ( resource:Tyrosine-protein_kinase_JAK2 ) ( resource:Serine/threonine-protein_kinase_mTOR ) } . ?o property:cell_component ?c }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q285613
P702
Q863908
USER
Which gene encodes Serine/threonine-protein kinase mTOR ?
(Q285613,P702,c(Q863908))
action filter_type
action find
entity Q285613
relation P702
type Q863908
['Q285613', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q285613 property:P702 ?n . ?n rdf:type ontology:Q863908 }
Serine/threonine-protein kinase mTOR
action filter_type
action find
entity Serine/threonine-protein kinase mTOR
relation encoded by
type nucleic acid sequence
['Serine/threonine-protein kinase mTOR', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:Serine/threonine-protein_kinase_mTOR property:encoded_by ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q14876086
SYSTEM
MTOR
Q14876086
(Q285613,P702,c(Q863908))
action filter_type
action find
entity Q285613
relation P702
type Q863908
[ANSWER] encodes Serine/threonine-protein kinase mTOR
['Q285613', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q285613 property:P702 ?n . ?n rdf:type ontology:Q863908 }
MTOR
MTOR encodes Serine/threonine-protein kinase mTOR
MTOR
action filter_type
action find
entity Serine/threonine-protein kinase mTOR
relation encoded by
type nucleic acid sequence
['Serine/threonine-protein kinase mTOR', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:Serine/threonine-protein_kinase_mTOR property:encoded_by ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27547476
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by Yos9p YDR057W ?
(c(Q863908),P688,Q27547476)
action filter_type
action find_reverse
entity Q27547476
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27547476']
SELECT DISTINCT ?o WHERE { ?o property:P688 resource:Q27547476 . ?o rdf:type ontology:Q863908 }
Yos9p YDR057W
action filter_type
action find_reverse
entity Yos9p YDR057W
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Yos9p YDR057W']
SELECT DISTINCT ?o WHERE { ?o property:encodes resource:Yos9p_YDR057W . ?o rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27540280
SYSTEM
Yos9p YDR057W
Q27540280
(c(Q863908),P688,Q27547476)
action filter_type
action find_reverse
entity Q27547476
relation P688
type Q863908
The nucleic acid sequence that is encoded by Yos9 p YDR057 W is called [ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q27547476']
SELECT DISTINCT ?o WHERE { ?o property:P688 resource:Q27547476 . ?o rdf:type ontology:Q863908 }
Yos9p YDR057W
The nucleic acid sequence that is encoded by Yos9 p YDR057 W is called Yos9p YDR057W
Yos9p YDR057W
action filter_type
action find_reverse
entity Yos9p YDR057W
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Yos9p YDR057W']
SELECT DISTINCT ?o WHERE { ?o property:encodes resource:Yos9p_YDR057W . ?o rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27540280
P703
Q631147
USER
Which taxon is that nucleic acid sequence a part of ?
(Q27540280,P703,c(Q631147))
action filter_type
action find
entity Q27540280
relation P703
type Q631147
['Q27540280', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?r WHERE { resource:Q27540280 property:P703 ?r . ?r rdf:type ontology:Q631147 }
Yos9p YDR057W
action filter_type
action find
entity Yos9p YDR057W
relation found in taxon
type infraspecific name
['Yos9p YDR057W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?r WHERE { resource:Yos9p_YDR057W property:found_in_taxon ?r . ?r rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27540280,P703,c(Q631147))
action filter_type
action find
entity Q27540280
relation P703
type Q631147
[ANSWER] is that nucleic acid sequence a part of
['Q27540280', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?r WHERE { resource:Q27540280 property:P703 ?r . ?r rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c is that nucleic acid sequence a part of
Saccharomyces cerevisiae S288c
action filter_type
action find
entity Yos9p YDR057W
relation found in taxon
type infraspecific name
['Yos9p YDR057W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?r WHERE { resource:Yos9p_YDR057W property:found_in_taxon ?r . ?r rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q22569017 Q27540280
P688
Q181394
USER
Which nutrients are encoded by Yos9p YDR057W or PhnG protein    YPO3457 ?
OR((Q27540280,P688,c(Q181394)), (Q22569017,P688,c(Q181394)))
action filter_type
action union
action find
entity Q27540280
relation P688
action find
entity Q22569017
relation P688
type Q181394
{'OR': [['Q27540280', 'P688', {'concept': 'Q181394'}], ['Q22569017', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?u WHERE { { { resource:Q27540280 property:P688 ?u } UNION { resource:Q22569017 property:P688 ?u } } . ?u rdf:type ontology:Q181394 }
PhnG protein    YPO3457 Yos9p YDR057W
action filter_type
action union
action find
entity Yos9p YDR057W
relation encodes
action find
entity PhnG protein    YPO3457
relation encodes
type nutrient
{'OR': [['Yos9p YDR057W', 'encodes', {'concept': 'nutrient'}], ['PhnG protein    YPO3457', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?u WHERE { { { resource:Yos9p_YDR057W property:encodes ?u } UNION { resource:PhnG_protein____YPO3457 property:encodes ?u } } . ?u rdf:type ontology:nutrient }
[]
nutrient
Q27483358 Q27547476
SYSTEM
PhnG protein    YPO3457, Yos9p YDR057W
Q27483358 Q27547476
OR((Q27540280,P688,c(Q181394)), (Q22569017,P688,c(Q181394)))
action filter_type
action union
action find
entity Q27540280
relation P688
action find
entity Q22569017
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q27540280', 'P688', {'concept': 'Q181394'}], ['Q22569017', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?u WHERE { { { resource:Q27540280 property:P688 ?u } UNION { resource:Q22569017 property:P688 ?u } } . ?u rdf:type ontology:Q181394 }
PhnG protein    YPO3457 Yos9p YDR057W
PhnG protein YPO3457 and Yos9p YDR057W are encoded by Yos9p YDR057W or PhnG protein YPO3457
PhnG protein    YPO3457 Yos9p YDR057W
action filter_type
action union
action find
entity Yos9p YDR057W
relation encodes
action find
entity PhnG protein    YPO3457
relation encodes
type nutrient
{'OR': [['Yos9p YDR057W', 'encodes', {'concept': 'nutrient'}], ['PhnG protein    YPO3457', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?u WHERE { { { resource:Yos9p_YDR057W property:encodes ?u } UNION { resource:PhnG_protein____YPO3457 property:encodes ?u } } . ?u rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q21982210 Q285613
P129
Q8386
USER
Which drugs do Serine/threonine-protein kinase mTOR or Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 interact with ?
OR((Q285613,P129,c(Q8386)), (Q21982210,P129,c(Q8386)))
action filter_type
action union
action find
entity Q285613
relation P129
action find
entity Q21982210
relation P129
type Q8386
{'OR': [['Q285613', 'P129', {'concept': 'Q8386'}], ['Q21982210', 'P129', {'concept': 'Q8386'}]]}
SELECT DISTINCT ?e WHERE { { ?u property:P129 ?e . VALUES ( ?u ) { ( resource:Q285613 ) ( resource:Q21982210 ) } } . ?e rdf:type ontology:Q8386 }
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 Serine/threonine-protein kinase mTOR
action filter_type
action union
action find
entity Serine/threonine-protein kinase mTOR
relation physically interacts with
action find
entity Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
relation physically interacts with
type drug
{'OR': [['Serine/threonine-protein kinase mTOR', 'physically interacts with', {'concept': 'drug'}], ['Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1', 'physically interacts with', {'concept': 'drug'}]]}
SELECT DISTINCT ?e WHERE { { ?u property:physically_interacts_with ?e . VALUES ( ?u ) { ( resource:Serine/threonine-protein_kinase_mTOR ) ( resource:Potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_1 ) } } . ?e rdf:type ontology:drug }
[]
drug
Q412221 Q422740 Q425729 Q7699074 Q421052
SYSTEM
clonidine, propofol, Ivabradine, temsirolimus, Everolimus
Q412221 Q422740 Q425729 Q7699074 Q421052
OR((Q285613,P129,c(Q8386)), (Q21982210,P129,c(Q8386)))
action filter_type
action union
action find
entity Q285613
relation P129
action find
entity Q21982210
relation P129
type Q8386
[ANSWERS] Serine/threonine-protein kinase mTOR or Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 interact with
{'OR': [['Q285613', 'P129', {'concept': 'Q8386'}], ['Q21982210', 'P129', {'concept': 'Q8386'}]]}
SELECT DISTINCT ?e WHERE { { ?u property:P129 ?e . VALUES ( ?u ) { ( resource:Q285613 ) ( resource:Q21982210 ) } } . ?e rdf:type ontology:Q8386 }
clonidine propofol Ivabradine temsirolimus Everolimus
Clonidine, propofol, Ivabradine, temsirolimus and Everolimus Serine/threonine-protein kinase mTOR or Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 interact with
clonidine propofol Ivabradine temsirolimus Everolimus
action filter_type
action union
action find
entity Serine/threonine-protein kinase mTOR
relation physically interacts with
action find
entity Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
relation physically interacts with
type drug
{'OR': [['Serine/threonine-protein kinase mTOR', 'physically interacts with', {'concept': 'drug'}], ['Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1', 'physically interacts with', {'concept': 'drug'}]]}
SELECT DISTINCT ?e WHERE { { ?u property:physically_interacts_with ?e . VALUES ( ?u ) { ( resource:Serine/threonine-protein_kinase_mTOR ) ( resource:Potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_1 ) } } . ?e rdf:type ontology:drug }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P129
Q181394 Q79529 Q181394
USER
Which nutrients can communicate with min number of nutrients and chemical substances ?
(c(Q181394),P129,c(Q181394)|c(Q79529))
action argmin
action union
action find_tuple_counts
relation P129
type Q181394
type Q181394
action find_tuple_counts
relation P129
type Q181394
type Q79529
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q181394'}, {'concept': 'Q79529'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?c ) AS ?s ) WHERE { { ?o property:P129 ?c . ?o rdf:type ontology:Q181394 . ?c rdf:type ontology:Q181394 } UNION { ?o property:P129 ?c . ?o rdf:type ontology:Q181394 . ?c rdf:type ontology:Q79529 } } GROUP BY ?o } . FILTER ( ?s = ?i ) . { SELECT DISTINCT ( MIN ( ?m ) AS ?i ) { SELECT DISTINCT ?b ( COUNT ( ?k ) AS ?m ) WHERE { { ?b property:P129 ?k . ?b rdf:type ontology:Q181394 . ?k rdf:type ontology:Q79529 } UNION { ?b property:P129 ?k . ?b rdf:type ontology:Q181394 . ?k rdf:type ontology:Q181394 } } GROUP BY ?b } } }
action argmin
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'nutrient'}, {'concept': 'chemical substance'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?c ) AS ?s ) WHERE { { ?o property:physically_interacts_with ?c . ?o rdf:type ontology:nutrient . ?c rdf:type ontology:nutrient } UNION { ?o property:physically_interacts_with ?c . ?o rdf:type ontology:nutrient . ?c rdf:type ontology:chemical_substance } } GROUP BY ?o } . FILTER ( ?s = ?i ) . { SELECT DISTINCT ( MIN ( ?m ) AS ?i ) { SELECT DISTINCT ?b ( COUNT ( ?k ) AS ?m ) WHERE { { ?b property:physically_interacts_with ?k . ?b rdf:type ontology:nutrient . ?k rdf:type ontology:chemical_substance } UNION { ?b property:physically_interacts_with ?k . ?b rdf:type ontology:nutrient . ?k rdf:type ontology:nutrient } } GROUP BY ?b } } }
[]
nutrient chemical substance nutrient
Q5446456 Q15335226 Q254943
SYSTEM
Fibroblast growth factor receptor 2, D(2) dopamine receptor, Retinoic acid receptor alpha
Q21494718 Q21115210 Q21119831 Q21108693 Q21109971 Q21119231 Q21115284 Q21987850 Q423701 Q420930 Q21110295 Q1407929 Q21173169 Q21497881 Q21118791 Q1499998 Q1947065 Q15335226 Q14864142 Q7553281 Q4216080 Q410142 Q4048886 Q21113552 Q21137668 Q1552797 Q21135205 Q424440 Q21117208 Q21102756 Q3609382 Q21113671 Q401536 Q258915 Q21126218 Q21130085 Q21135448 Q21173374 Q21126810 Q21984557 Q7861688 Q21118909 Q21136517 Q21496578 Q254943 Q21496575 Q21496576 Q2042529 Q21109974 Q21985924 Q5038044 Q21109218 Q14905270 Q5201199 Q21135975 Q21172213 Q14914580 Q5198252 Q21109744 Q21124458 Q21111742 Q21123239 Q15324125 Q21110296 Q21110467 Q21119828 Q21118920 Q6414726 Q22680153 Q21108482 Q21116513 Q21499436 Q21097491 Q21111162 Q21116946 Q21115906 Q21114332 Q21119851 Q417149 Q5611730 Q21154430 Q412483 Q1493174 Q11071131 Q21497887 Q22676679 Q5514257 Q21119672 Q21987843 Q21118732 Q21110396 Q419999 Q21135949 Q21096262 Q21135943 Q21135945 Q21117235 Q21108844 Q21119704 Q21111803 Q22679015 Q15322943 Q21174687 Q21105060 Q21125240 Q21118356 Q21117300 Q21175110 Q4036865 Q21983261 Q21102300 Q21139123 Q21108338 Q21496918 Q21117407 Q21110752 Q408305 Q21097237 Q21120955 Q14911895 Q3721138 Q21108487 Q14905748 Q21102136 Q5014947 Q423572 Q12746111 Q21499210 Q21119156 Q2819188 Q21119157 Q21115989 Q21118919 Q7136149 Q21106693 Q21103198 Q5464652 Q356093 Q21119847 Q22677167 Q21132917 Q21132915 Q21135411 Q21113504 Q14912057 Q21989670 Q21127300 Q21111553 Q21108161 Q21172884 Q21172886 Q1436420 Q21111833 Q21106691 Q6981557 Q14914198 Q21138907 Q21172286 Q21121233 Q21159525 Q22678664 Q5446457 Q5446456 Q21106737 Q5446453 Q14914104 Q3271142 Q21992684 Q21109026 Q21113832 Q21123416 Q21121086 Q21984578 Q21133205 Q21102082 Q21984577 Q904925 Q3415811 Q21131101 Q5014958 Q5014957 Q415718 Q21982203 Q21113540 Q423561 Q21120051 Q21115996 Q22676802 Q21109157 Q21115998 Q21988427 Q21991039 Q411791 Q21118884 Q21127141 Q21111265 Q15327766 Q21118970 Q21118976 Q416336 Q21173608 Q21136134 Q21129997 Q6592976 Q423628 Q21113510 Q424693 Q21123223 Q410434 Q6449560 Q21111520 Q21984381 Q21125499 Q21499447 Q5201201 Q21495791 Q21121496 Q21123220 Q21134814 Q21113683 Q21118710 Q418781
(c(Q181394),P129,c(Q181394)|c(Q79529))
action argmin
action union
action find_tuple_counts
relation P129
type Q181394
type Q181394
action find_tuple_counts
relation P129
type Q181394
type Q79529
[ANSWERS] can communicate with min number of nutrients and chemical substances
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q181394'}, {'concept': 'Q79529'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?c ) AS ?s ) WHERE { { ?o property:P129 ?c . ?o rdf:type ontology:Q181394 . ?c rdf:type ontology:Q181394 } UNION { ?o property:P129 ?c . ?o rdf:type ontology:Q181394 . ?c rdf:type ontology:Q79529 } } GROUP BY ?o } . FILTER ( ?s = ?i ) . { SELECT DISTINCT ( MIN ( ?m ) AS ?i ) { SELECT DISTINCT ?b ( COUNT ( ?k ) AS ?m ) WHERE { { ?b property:P129 ?k . ?b rdf:type ontology:Q181394 . ?k rdf:type ontology:Q79529 } UNION { ?b property:P129 ?k . ?b rdf:type ontology:Q181394 . ?k rdf:type ontology:Q181394 } } GROUP BY ?b } } }
Lysophosphatidic acid receptor 2 ATP-binding cassette sub-family A member 1 Potassium voltage-gated channel subfamily H member 5 G-protein coupled receptor 87 Cation channel sperm-associated protein 4 Tyrosine-protein kinase TXK Activated CDC42 kinase 1 Prostaglandin E2 receptor EP2 subtype Coagulation factor X Glutathione reductase, mitochondrial Galanin receptor type 2 Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 G protein-activated inward rectifier potassium channel 4 Multidrug resistance-associated protein 5 Voltage-dependent L-type calcium channel subunit alpha-1C Voltage-dependent N-type calcium channel subunit alpha-1B D(2) dopamine receptor 3-hydroxy-3-methylglutaryl-coenzyme A reductase Solute carrier family 12 member 3 72 kDa type IV collagenase Sodium-dependent serotonin transporter 3-oxo-5-alpha-steroid 4-dehydrogenase 2 ATP-sensitive inward rectifier potassium channel 14 Fibroblast growth factor receptor 4 Heat-stable enterotoxin receptor Dihydroorotate dehydrogenase (quinone), mitochondrial Cytochrome P450 3A4 Chymotrypsin-like elastase family member 1 Testis-specific serine/threonine-protein kinase 1 Cytochrome P450 11B2, mitochondrial ATP-binding cassette sub-family C member 8 Tyrosine-protein kinase Blk Renin Folate transporter 1 Mitogen-activated protein kinase kinase kinase kinase 5 Sodium channel protein type 2 subunit alpha Plasminogen Prostaglandin G/H synthase 1 Potassium voltage-gated channel subfamily D member 1 Non-receptor tyrosine-protein kinase TYK2 Ovarian cancer G-protein coupled receptor 1 Zinc-activated ligand-gated ion channel Lysophosphatidic acid receptor 3 Retinoic acid receptor alpha Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Toll-like receptor 9 Cation channel sperm-associated protein 3 P2X purinoceptor 4 Carbonic anhydrase 4 Serine/threonine-protein kinase B-raf Thyrotropin-releasing hormone receptor Cysteinyl leukotriene receptor 2 Multidrug and toxin extrusion protein 1 Solute carrier family 22 member 1 Short transient receptor potential channel 6 Cyclin-dependent kinase 6 Dual specificity mitogen-activated protein kinase kinase 7 Sodium-dependent neutral amino acid transporter B(0)AT2 Complement C1r subcomponent Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' Transient receptor potential cation channel subfamily V member 4 Galanin receptor type 3 Potassium-transporting ATPase alpha chain 1 ATP-sensitive inward rectifier potassium channel 8 P2X purinoceptor 3 ATP-sensitive inward rectifier potassium channel 11 Ornithine decarboxylase DNA topoisomerase 2-alpha Serine/threonine-protein kinase 4 Muscarinic acetylcholine receptor M1 Sodium/potassium-transporting ATPase subunit alpha-1 Acetylcholine receptor subunit alpha Carbonic anhydrase 12 Poly [ADP-ribose] polymerase 2 Tubulin beta chain Potassium channel subfamily K member 4 Dihydrofolate reductase Growth hormone-releasing hormone receptor Lysophosphatidic acid receptor 4 Cholesterol side-chain cleavage enzyme, mitochondrial Vitamin K-dependent gamma-carboxylase Glucagon-like peptide 2 receptor G protein-activated inward rectifier potassium channel 1 Acetylcholinesterase G-protein coupled estrogen receptor 1 Phosphatidylinositol 4-kinase type 2-beta Prostaglandin E2 receptor EP4 subtype Maltase-glucoamylase, intestinal Peptidyl-prolyl cis-trans isomerase FKBP1A Transthyretin Solute carrier family 22 member 11 Sodium leak channel non-selective protein Solute carrier family 22 member 8 Solute carrier family 22 member 12 Nuclear receptor ROR-beta P2X purinoceptor 4 Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Voltage-dependent L-type calcium channel subunit alpha-1S Cholinesterase Short transient receptor potential channel 4 Sodium/bile acid cotransporter Aldo-keto reductase family 1 member C3 Solute carrier organic anion transporter family member 2A1 Calcium/calmodulin-dependent protein kinase type II subunit gamma Cytochrome P450 3A5 Vitamin K epoxide reductase complex subunit 1 Discoidin domain-containing receptor 2 Platelet-derived growth factor receptor beta C-C chemokine receptor type 4 Lysophosphatidic acid receptor 2 Ribonucleoside-diphosphate reductase subunit M2 Lysophosphatidic acid receptor 1 Serine/threonine-protein kinase 24 Cytochrome P450 2J2 Steroid 17-alpha-hydroxylase/17,20 lyase Aromatic-L-amino-acid decarboxylase Nuclear receptor subfamily 2 group C member 2 Thymidylate synthase Neutrophil elastase Parathyroid hormone/parathyroid hormone-related peptide receptor Voltage-dependent L-type calcium channel subunit alpha-1C Retinoic acid receptor RXR-beta Cytochrome P450 1B1 Tyrosine-protein kinase BTK Motilin receptor Carbonic anhydrase 13 Inosine-5'-monophosphate dehydrogenase 2 Type-1 angiotensin II receptor Inosine-5'-monophosphate dehydrogenase 1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 P2X purinoceptor 1 Parathyroid hormone 2 receptor Cytoplasmic tyrosine-protein kinase BMX G-protein coupled receptor family C group 6 member A Follicle-stimulating hormone receptor Adenosine deaminase Potassium channel subfamily K member 12 Thyroid peroxidase Carbonic anhydrase 14 Carbonic anhydrase 7 Multidrug and toxin extrusion protein 2 Inward rectifier potassium channel 13 ATP-sensitive inward rectifier potassium channel 11 DNA topoisomerase 2-alpha Serine/threonine-protein kinase 10 Solute carrier family 22 member 6 Lysine-specific histone demethylase 1A Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Xanthine dehydrogenase/oxidase Cation channel sperm-associated protein 2 Tyrosine-protein kinase FRK Sodium channel protein type 4 subunit alpha Trifunctional purine biosynthetic protein adenosine-3 Ryanodine receptor 1 Brain-specific angiogenesis inhibitor 1 Ribonucleoside-diphosphate reductase large subunit Ryanodine receptor 3 Ceramide glucosyltransferase Fibroblast growth factor receptor 3 Fibroblast growth factor receptor 2 Proteinase-activated receptor 1 Fibroblast growth factor receptor 1 Toll-like receptor 4 Cytochrome P450 2D6 Vascular endothelial growth factor receptor 3 Tryptase alpha/beta-1 Adhesion G protein-coupled receptor G3 Sodium/hydrogen exchanger 5 Proton-coupled folate transporter Potassium voltage-gated channel subfamily D member 2 Mas-related G-protein coupled receptor member X1 Acid-sensing ion channel 2 Potassium voltage-gated channel subfamily D member 3 Cytochrome P450 11B1, mitochondrial Ryanodine receptor 2 Membrane primary amine oxidase Cytochrome P450 2B6 Cytochrome P450 2C8 C-X-C chemokine receptor type 4 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Calcium/calmodulin-dependent protein kinase type 1D Lysosomal protective protein Retinoic acid receptor RXR-gamma Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 Thymidylate synthase Serine/threonine-protein kinase PLK4 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Prostacyclin receptor Multidrug and toxin extrusion protein 2 Arachidonate 5-lipoxygenase Niemann-Pick C1-like protein 1 Sodium-coupled monocarboxylate transporter 1 Cation channel sperm-associated protein 1 Transient receptor potential cation channel subfamily V member 5 G-protein coupled receptor 143 Probable G-protein coupled receptor 139 Antithrombin-III Peptidyl-prolyl cis-trans isomerase A Solute carrier organic anion transporter family member 3A1 Atypical chemokine receptor 3 Retinoic acid receptor beta Tyrosine-protein kinase Fyn ATP-sensitive inward rectifier potassium channel 10 Pancreatic triacylglycerol lipase High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B RAF proto-oncogene serine/threonine-protein kinase Potassium voltage-gated channel subfamily KQT member 1 Chloride channel protein 1 Voltage-dependent L-type calcium channel subunit alpha-1D Trypsin-1 Muscarinic acetylcholine receptor M2 Cysteinyl leukotriene receptor 1 Metabotropic glutamate receptor 5 Phosphatidylinositol 4-kinase type 2-alpha High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A Equilibrative nucleoside transporter 4 ATP-binding cassette sub-family G member 2 Retinoic acid receptor RXR-alpha Catechol O-methyltransferase
Fibroblast growth factor receptor 2, D(2) dopamine receptor and Retinoic acid receptor alpha can communicate with min number of nutrients and chemical substances
Fibroblast growth factor receptor 2 D(2) dopamine receptor Retinoic acid receptor alpha
action argmin
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'nutrient'}, {'concept': 'chemical substance'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?c ) AS ?s ) WHERE { { ?o property:physically_interacts_with ?c . ?o rdf:type ontology:nutrient . ?c rdf:type ontology:nutrient } UNION { ?o property:physically_interacts_with ?c . ?o rdf:type ontology:nutrient . ?c rdf:type ontology:chemical_substance } } GROUP BY ?o } . FILTER ( ?s = ?i ) . { SELECT DISTINCT ( MIN ( ?m ) AS ?i ) { SELECT DISTINCT ?b ( COUNT ( ?k ) AS ?m ) WHERE { { ?b property:physically_interacts_with ?k . ?b rdf:type ontology:nutrient . ?k rdf:type ontology:chemical_substance } UNION { ?b property:physically_interacts_with ?k . ?b rdf:type ontology:nutrient . ?k rdf:type ontology:nutrient } } GROUP BY ?b } } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q21982210
P129
Q8386
USER
How many drugs do Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 contact with ?
(Q21982210,P129,c(Q8386))
action count
action filter_type
action find
entity Q21982210
relation P129
type Q8386
['Q21982210', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?n ) WHERE { resource:Q21982210 property:P129 ?q . ?q rdf:type ontology:Q8386 }
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
action count
action filter_type
action find
entity Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
relation physically interacts with
type drug
['Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?n ) WHERE { resource:Potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_1 property:physically_interacts_with ?q . ?q rdf:type ontology:drug }
[]
drug
SYSTEM
3
Q412221 Q425729 Q422740
(Q21982210,P129,c(Q8386))
action count
action filter_type
action find
entity Q21982210
relation P129
type Q8386
[ANSWER]
['Q21982210', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?n ) WHERE { resource:Q21982210 property:P129 ?q . ?q rdf:type ontology:Q8386 }
clonidine Ivabradine propofol
3
action count
action filter_type
action find
entity Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
relation physically interacts with
type drug
['Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?n ) WHERE { resource:Potassium/sodium_hyperpolarization-activated_cyclic_nucleotide-gated_channel_1 property:physically_interacts_with ?q . ?q rdf:type ontology:drug }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q21108118
P129
Q8386
USER
And what about 5-hydroxytryptamine receptor 2C?
(Q21108118,P129,c(Q8386))
action count
action filter_type
action find
entity Q21108118
relation P129
type Q8386
['Q21108118', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?i ) AS ?h ) WHERE { resource:Q21108118 property:P129 ?i . ?i rdf:type ontology:Q8386 }
5-hydroxytryptamine receptor 2C
action count
action filter_type
action find
entity 5-hydroxytryptamine receptor 2C
relation physically interacts with
type drug
['5-hydroxytryptamine receptor 2C', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?i ) AS ?h ) WHERE { resource:5-hydroxytryptamine_receptor_2C property:physically_interacts_with ?i . ?i rdf:type ontology:drug }
[]
drug
SYSTEM
34
Q1752915 Q424446 Q423308 Q221361 Q201872 Q58375 Q205517 Q407972 Q6821618 Q269111 Q6824154 Q424442 Q416701 Q417813 Q421930 Q3563148 Q395229 Q411932 Q44931 Q7702355 Q418050 Q415752 Q424477 Q419186 Q23118 Q58614 Q412443 Q226905 Q411188 Q411457 Q423520 Q413581 Q340139 Q3008033
(Q21108118,P129,c(Q8386))
action count
action filter_type
action find
entity Q21108118
relation P129
type Q8386
[ANSWER]
['Q21108118', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?i ) AS ?h ) WHERE { resource:Q21108118 property:P129 ?i . ?i rdf:type ontology:Q8386 }
trifluoperazine lisuride cabergoline clozapine Olanzapine thioridazine ziprasidone chlorpromazine mesoridazine apomorphine methiothepin methysergide mianserin oxymetazoline mirtazapine vortioxetine agomelatine duloxetine sarpogrelate terguride sertindole pergolide methylergonovine ergotamine LSD loxapine risperidone zotepine aripiprazole trazodone perphenazine bromocriptine lorcaserin Cyamemazine
34
action count
action filter_type
action find
entity 5-hydroxytryptamine receptor 2C
relation physically interacts with
type drug
['5-hydroxytryptamine receptor 2C', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?i ) AS ?h ) WHERE { resource:5-hydroxytryptamine_receptor_2C property:physically_interacts_with ?i . ?i rdf:type ontology:drug }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q12746111
Q8386
USER
And what about Motilin receptor?
(Q12746111,P129,c(Q8386))
action count
action filter_type
action find
entity Q12746111
relation P129
type Q8386
['Q12746111', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?u ) WHERE { resource:Q12746111 property:P129 ?y . ?y rdf:type ontology:Q8386 }
Motilin receptor
action count
action filter_type
action find
entity Motilin receptor
relation physically interacts with
type drug
['Motilin receptor', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?u ) WHERE { resource:Motilin_receptor property:physically_interacts_with ?y . ?y rdf:type ontology:drug }
[]
drug
SYSTEM
3
(Q12746111,P129,c(Q8386))
action count
action filter_type
action find
entity Q12746111
relation P129
type Q8386
[ANSWER]
['Q12746111', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?u ) WHERE { resource:Q12746111 property:P129 ?y . ?y rdf:type ontology:Q8386 }
3
action count
action filter_type
action find
entity Motilin receptor
relation physically interacts with
type drug
['Motilin receptor', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?u ) WHERE { resource:Motilin_receptor property:physically_interacts_with ?y . ?y rdf:type ontology:drug }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q285613
P682
Q9332
USER
What biological process is Serine/threonine-protein kinase mTOR involved in ?
(Q285613,P682,c(Q9332))
action filter_type
action find
entity Q285613
relation P682
type Q9332
['Q285613', 'P682', {'concept': 'Q9332'}]
SELECT DISTINCT ?m WHERE { resource:Q285613 property:P682 ?m . ?m rdf:type ontology:Q9332 }
Serine/threonine-protein kinase mTOR
action filter_type
action find
entity Serine/threonine-protein kinase mTOR
relation biological process
type behavior
['Serine/threonine-protein kinase mTOR', 'biological process', {'concept': 'behavior'}]
SELECT DISTINCT ?m WHERE { resource:Serine/threonine-protein_kinase_mTOR property:biological_process ?m . ?m rdf:type ontology:behavior }
[]
behavior
Q921513
SYSTEM
social behavior
Q921513
(Q285613,P682,c(Q9332))
action filter_type
action find
entity Q285613
relation P682
type Q9332
[ANSWER] is Serine/threonine-protein kinase mTOR involved in
['Q285613', 'P682', {'concept': 'Q9332'}]
SELECT DISTINCT ?m WHERE { resource:Q285613 property:P682 ?m . ?m rdf:type ontology:Q9332 }
social behavior
Social behavior is Serine/threonine-protein kinase mTOR involved in
social behavior
action filter_type
action find
entity Serine/threonine-protein kinase mTOR
relation biological process
type behavior
['Serine/threonine-protein kinase mTOR', 'biological process', {'concept': 'behavior'}]
SELECT DISTINCT ?m WHERE { resource:Serine/threonine-protein_kinase_mTOR property:biological_process ?m . ?m rdf:type ontology:behavior }
[]