Simple Question (Direct)
Simple Question
Q21987186
P681
Q5058355
USER
Which cellular components are components of Leucine-rich repeat and fibronectin type-III domain-containing protein 3 ?
(Q21987186,P681,c(Q5058355))
action filter_type
action find
entity Q21987186
relation P681
type Q5058355
['Q21987186', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?o WHERE { resource:Q21987186 property:P681 ?o . ?o rdf:type ontology:Q5058355 }
Leucine-rich repeat and fibronectin type-III domain-containing protein 3
action filter_type
action find
entity Leucine-rich repeat and fibronectin type-III domain-containing protein 3
relation cell component
type cellular component
['Leucine-rich repeat and fibronectin type-III domain-containing protein 3', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?o WHERE { resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 property:cell_component ?o . ?o rdf:type ontology:cellular_component }
[]
cellular component
Q29548 Q189094 Q14353100
SYSTEM
plasma membrane, cell surface, cell projection
Q29548 Q189094 Q14353100
(Q21987186,P681,c(Q5058355))
action filter_type
action find
entity Q21987186
relation P681
type Q5058355
The [ANSWERS] are components of Leucine-rich repeat and fibronectin type-III domain-containing protein 3
['Q21987186', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?o WHERE { resource:Q21987186 property:P681 ?o . ?o rdf:type ontology:Q5058355 }
plasma membrane cell surface cell projection
The plasma membrane, cell surface and cell projection are components of Leucine-rich repeat and fibronectin type-III domain-containing protein 3
plasma membrane cell surface cell projection
action filter_type
action find
entity Leucine-rich repeat and fibronectin type-III domain-containing protein 3
relation cell component
type cellular component
['Leucine-rich repeat and fibronectin type-III domain-containing protein 3', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?o WHERE { resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 property:cell_component ?o . ?o rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21987186
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by Leucine-rich repeat and fibronectin type-III domain-containing protein 3 ?
(c(Q863908),P688,Q21987186)
action filter_type
action find_reverse
entity Q21987186
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21987186']
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:Q863908 . ?k property:P688 resource:Q21987186 }
Leucine-rich repeat and fibronectin type-III domain-containing protein 3
action filter_type
action find_reverse
entity Leucine-rich repeat and fibronectin type-III domain-containing protein 3
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Leucine-rich repeat and fibronectin type-III domain-containing protein 3']
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:nucleic_acid_sequence . ?k property:encodes resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 }
[]
nucleic acid sequence
Q18298182
SYSTEM
Lrfn3
Q18298182
(c(Q863908),P688,Q21987186)
action filter_type
action find_reverse
entity Q21987186
relation P688
type Q863908
The nucleic acid sequence that is encoded by Leucine-rich repeat and fibronectin type- III domain-containing protein 3 is called [ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q21987186']
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:Q863908 . ?k property:P688 resource:Q21987186 }
Lrfn3
The nucleic acid sequence that is encoded by Leucine-rich repeat and fibronectin type- III domain-containing protein 3 is called Lrfn3
Lrfn3
action filter_type
action find_reverse
entity Leucine-rich repeat and fibronectin type-III domain-containing protein 3
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Leucine-rich repeat and fibronectin type-III domain-containing protein 3']
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:nucleic_acid_sequence . ?k property:encodes resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q18298182 Q21987186
P702
Q181394
USER
Is Leucine-rich repeat and fibronectin type-III domain-containing protein 3 the gene that is encoded by that nucleic acid sequence ?
(Q21987186,P702,Q18298182)
action is_in
entity Q18298182
action find
entity Q21987186
relation P702
['Q21987186', 'P702', 'Q18298182']
ASK WHERE { resource:Q21987186 property:P702 resource:Q18298182 }
Lrfn3 Leucine-rich repeat and fibronectin type-III domain-containing protein 3
action is_in
entity Lrfn3
action find
entity Leucine-rich repeat and fibronectin type-III domain-containing protein 3
relation encoded by
['Leucine-rich repeat and fibronectin type-III domain-containing protein 3', 'encoded by', 'Lrfn3']
ASK WHERE { resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 property:encoded_by resource:Lrfn3 }
[]
nutrient
SYSTEM
YES
(Q21987186,P702,Q18298182)
action is_in
entity Q18298182
action find
entity Q21987186
relation P702
[ANSWER]
['Q21987186', 'P702', 'Q18298182']
ASK WHERE { resource:Q21987186 property:P702 resource:Q18298182 }
Yes
action is_in
entity Lrfn3
action find
entity Leucine-rich repeat and fibronectin type-III domain-containing protein 3
relation encoded by
['Leucine-rich repeat and fibronectin type-III domain-containing protein 3', 'encoded by', 'Lrfn3']
ASK WHERE { resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 property:encoded_by resource:Lrfn3 }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q21987186 Q23401449 Q18298182
P702
Q863908
USER
Does lipoprotein signal peptide    Smed_1773 and Lrfn3 encode Leucine-rich repeat and fibronectin type-III domain-containing protein 3 ?
(Q21987186,P702,Q23401449) (Q21987186,P702,Q18298182)
action is_in
entity Q21987186
action intersection
action find_reverse
entity Q23401449
relation P702
action find_reverse
entity Q18298182
relation P702
['Q21987186', 'P702', 'Q23401449'] ['Q21987186', 'P702', 'Q18298182']
ASK WHERE { resource:Q21987186 property:P702 resource:Q23401449 . resource:Q21987186 property:P702 resource:Q18298182 }
Leucine-rich repeat and fibronectin type-III domain-containing protein 3 lipoprotein signal peptide    Smed_1773 Lrfn3
action is_in
entity Leucine-rich repeat and fibronectin type-III domain-containing protein 3
action intersection
action find_reverse
entity lipoprotein signal peptide    Smed_1773
relation encoded by
action find_reverse
entity Lrfn3
relation encoded by
['Leucine-rich repeat and fibronectin type-III domain-containing protein 3', 'encoded by', 'lipoprotein signal peptide    Smed_1773'] ['Leucine-rich repeat and fibronectin type-III domain-containing protein 3', 'encoded by', 'Lrfn3']
ASK WHERE { resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 property:encoded_by resource:lipoprotein_signal_peptide____Smed_1773 . resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 property:encoded_by resource:Lrfn3 }
[]
nucleic acid sequence
SYSTEM
NO and YES respectively
(Q21987186,P702,Q23401449) (Q21987186,P702,Q18298182)
action is_in
entity Q21987186
action intersection
action find_reverse
entity Q23401449
relation P702
action find_reverse
entity Q18298182
relation P702
[ANSWER]
['Q21987186', 'P702', 'Q23401449'] ['Q21987186', 'P702', 'Q18298182']
ASK WHERE { resource:Q21987186 property:P702 resource:Q23401449 . resource:Q21987186 property:P702 resource:Q18298182 }
NO and YES respectively
action is_in
entity Leucine-rich repeat and fibronectin type-III domain-containing protein 3
action intersection
action find_reverse
entity lipoprotein signal peptide    Smed_1773
relation encoded by
action find_reverse
entity Lrfn3
relation encoded by
['Leucine-rich repeat and fibronectin type-III domain-containing protein 3', 'encoded by', 'lipoprotein signal peptide    Smed_1773'] ['Leucine-rich repeat and fibronectin type-III domain-containing protein 3', 'encoded by', 'Lrfn3']
ASK WHERE { resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 property:encoded_by resource:lipoprotein_signal_peptide____Smed_1773 . resource:Leucine-rich_repeat_and_fibronectin_type-III_domain-containing_protein_3 property:encoded_by resource:Lrfn3 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18298182
P684
Q863908
USER
What is an otrhologus gene for Lrfn3 ?
(Q18298182,P684,c(Q863908))
action filter_type
action find
entity Q18298182
relation P684
type Q863908
['Q18298182', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { ?e rdf:type ontology:Q863908 . resource:Q18298182 property:P684 ?e }
Lrfn3
action filter_type
action find
entity Lrfn3
relation ortholog
type nucleic acid sequence
['Lrfn3', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { ?e rdf:type ontology:nucleic_acid_sequence . resource:Lrfn3 property:ortholog ?e }
[]
nucleic acid sequence
Q18046121
SYSTEM
LRFN3
Q18046121
(Q18298182,P684,c(Q863908))
action filter_type
action find
entity Q18298182
relation P684
type Q863908
An otrhologus gene for Lrfn3 is the [ANSWER]
['Q18298182', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { ?e rdf:type ontology:Q863908 . resource:Q18298182 property:P684 ?e }
LRFN3
An otrhologus gene for Lrfn3 is the LRFN3
LRFN3
action filter_type
action find
entity Lrfn3
relation ortholog
type nucleic acid sequence
['Lrfn3', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { ?e rdf:type ontology:nucleic_acid_sequence . resource:Lrfn3 property:ortholog ?e }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q18030277
Q863908
USER
And how about OPA1?
(Q18030277,P684,c(Q863908))
action filter_type
action find
entity Q18030277
relation P684
type Q863908
['Q18030277', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?h WHERE { resource:Q18030277 property:P684 ?h . ?h rdf:type ontology:Q863908 }
OPA1
action filter_type
action find
entity OPA1
relation ortholog
type nucleic acid sequence
['OPA1', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?h WHERE { resource:OPA1 property:ortholog ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18266525
SYSTEM
Opa1
Q18266525
(Q18030277,P684,c(Q863908))
action filter_type
action find
entity Q18030277
relation P684
type Q863908
[ANSWER]
['Q18030277', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?h WHERE { resource:Q18030277 property:P684 ?h . ?h rdf:type ontology:Q863908 }
Opa1
Opa1
action filter_type
action find
entity OPA1
relation ortholog
type nucleic acid sequence
['OPA1', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?h WHERE { resource:OPA1 property:ortholog ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q79529 Q8386 Q181394
USER
How many nutrients contact atleast 17 chemical substances and drugs ?
(c(Q181394),P129,c(Q79529)|c(Q8386))
action count
action atleast
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q8386
value 17
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ( COUNT ( ?d ) AS ?x ) WHERE { { SELECT DISTINCT ?d ( COUNT ( ?w ) AS ?j ) WHERE { ?w rdf:type ?m . VALUES ( ?m ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } } GROUP BY ?d } . FILTER ( ?j >= 17 ) }
action count
action atleast
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
value 17
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'drug'}]]
SELECT DISTINCT ( COUNT ( ?d ) AS ?x ) WHERE { { SELECT DISTINCT ?d ( COUNT ( ?w ) AS ?j ) WHERE { ?w rdf:type ?m . VALUES ( ?m ) { ( ontology:chemical_substance ) ( ontology:drug ) } } GROUP BY ?d } . FILTER ( ?j >= 17 ) }
[]
chemical substance drug nutrient
SYSTEM
52
Q7050954 Q21116154 Q309513 Q308856 Q4847910 Q287961 Q2663095 Q5123372 Q410142 Q288797 Q287958 Q21126810 Q15323278 Q21110867 Q4847900 Q4847907 Q4639596 Q416601 Q4734884 Q4734887 Q4734886 Q21116162 Q21116164 Q2844056 Q21115334 Q288382 Q21115051 Q21115052 Q415364 Q21109355 Q4734894 Q21110872 Q4734892 Q21114578 Q21108118 Q4734891 Q21114576 Q21131500 Q8083989 Q3062781 Q12746120 Q288395 Q21115046 Q21115043 Q7834290 Q21114582 Q21497939 Q1949517 Q21109363 Q21109359 Q5520260 Q2034004
(c(Q181394),P129,c(Q79529)|c(Q8386))
action count
action atleast
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q8386
value 17
[ANSWER]
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ( COUNT ( ?d ) AS ?x ) WHERE { { SELECT DISTINCT ?d ( COUNT ( ?w ) AS ?j ) WHERE { ?w rdf:type ?m . VALUES ( ?m ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } } GROUP BY ?d } . FILTER ( ?j >= 17 ) }
Sodium-dependent noradrenaline transporter Adenosine receptor A3 Histamine H1 receptor D(4) dopamine receptor Muscarinic acetylcholine receptor M2 Beta-2 adrenergic receptor Glucocorticoid receptor Mu-type opioid receptor Sodium-dependent serotonin transporter 5-hydroxytryptamine receptor 1B Beta-1 adrenergic receptor Prostaglandin G/H synthase 1 Transient receptor potential cation channel subfamily A member 1 D(1A) dopamine receptor Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 5-hydroxytryptamine receptor 2B Androgen receptor Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor Alpha-1B adrenergic receptor Adenosine receptor A2a Adenosine receptor A2b Muscarinic acetylcholine receptor M3 Delta-type opioid receptor Histamine H4 receptor 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 1F Prostaglandin G/H synthase 2 5-hydroxytryptamine receptor 7 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-3 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-5 D(1B) dopamine receptor Kappa-type opioid receptor Adenosine receptor A1 Muscarinic acetylcholine receptor M5 Histamine H3 receptor 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-2 5-hydroxytryptamine receptor 7 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 6 5-hydroxytryptamine receptor 5A Gamma-aminobutyric acid receptor subunit alpha-1 D(2) dopamine receptor
52
action count
action atleast
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
value 17
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'drug'}]]
SELECT DISTINCT ( COUNT ( ?d ) AS ?x ) WHERE { { SELECT DISTINCT ?d ( COUNT ( ?w ) AS ?j ) WHERE { ?w rdf:type ?m . VALUES ( ?m ) { ( ontology:chemical_substance ) ( ontology:drug ) } } GROUP BY ?d } . FILTER ( ?j >= 17 ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18266525
P703
Q16521
USER
Which taxon is Opa1 found in ?
(Q18266525,P703,c(Q16521))
action filter_type
action find
entity Q18266525
relation P703
type Q16521
['Q18266525', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q16521 . resource:Q18266525 property:P703 ?o }
Opa1
action filter_type
action find
entity Opa1
relation found in taxon
type taxon
['Opa1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:taxon . resource:Opa1 property:found_in_taxon ?o }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
(Q18266525,P703,c(Q16521))
action filter_type
action find
entity Q18266525
relation P703
type Q16521
Opa1 is found in [ANSWER]
['Q18266525', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q16521 . resource:Q18266525 property:P703 ?o }
Mus musculus
Opa1 is found in Mus musculus
Mus musculus
action filter_type
action find
entity Opa1
relation found in taxon
type taxon
['Opa1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:taxon . resource:Opa1 property:found_in_taxon ?o }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P361
Q15989253 Q223557 Q5058355
USER
Which cellular components are parts of approximately 1 parts or physical objects ?
(c(Q5058355),P361,c(Q15989253)|c(Q223557))
action approx
action union
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action find_tuple_counts
relation P361
type Q5058355
type Q223557
value 1
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q15989253'}, {'concept': 'Q223557'}]]
SELECT DISTINCT ?c WHERE { { SELECT DISTINCT ?c ( COUNT ( ?r ) AS ?z ) WHERE { { ?c rdf:type ontology:Q5058355 . ?r rdf:type ontology:Q223557 . ?c property:P361 ?r } UNION { ?c property:P361 ?r . ?c rdf:type ontology:Q5058355 . ?r rdf:type ontology:Q15989253 } } GROUP BY ?c } . FILTER ( ?z = 1 ) }
action approx
action union
action find_tuple_counts
relation part of
type cellular component
type part
action find_tuple_counts
relation part of
type cellular component
type physical object
value 1
[{'concept': 'cellular component'}, 'part of', [{'concept': 'part'}, {'concept': 'physical object'}]]
SELECT DISTINCT ?c WHERE { { SELECT DISTINCT ?c ( COUNT ( ?r ) AS ?z ) WHERE { { ?c rdf:type ontology:cellular_component . ?r rdf:type ontology:physical_object . ?c property:part_of ?r } UNION { ?c property:part_of ?r . ?c rdf:type ontology:cellular_component . ?r rdf:type ontology:part } } GROUP BY ?c } . FILTER ( ?z = 1 ) }
[]
part physical object cellular component
Q14912978 Q22329076 Q22326356
SYSTEM
mitochondrial nucleoid, plastid nucleoid, membrane protein complex
Q14912978 Q22326356 Q22327622 Q22327479 Q22327475 Q22326870 Q14914004 Q15320191 Q22328035 Q22329249 Q22327061 Q22326951 Q22328884 Q22328762 Q22327083 Q14873267 Q22329076 Q2914458 Q193825 Q22327423
(c(Q5058355),P361,c(Q15989253)|c(Q223557))
action approx
action union
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action find_tuple_counts
relation P361
type Q5058355
type Q223557
value 1
[ANSWERS] are parts of approximately 1 parts or physical objects
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q15989253'}, {'concept': 'Q223557'}]]
SELECT DISTINCT ?c WHERE { { SELECT DISTINCT ?c ( COUNT ( ?r ) AS ?z ) WHERE { { ?c rdf:type ontology:Q5058355 . ?r rdf:type ontology:Q223557 . ?c property:P361 ?r } UNION { ?c property:P361 ?r . ?c rdf:type ontology:Q5058355 . ?r rdf:type ontology:Q15989253 } } GROUP BY ?c } . FILTER ( ?z = 1 ) }
mitochondrial nucleoid membrane protein complex side of membrane presynapse postsynapse DAPK1-calmodulin complex synaptic membrane synaptic cleft organelle lumen virion nucleoid extracellular isoamylase complex oxidoreductase complex organellar ribosome Dxr protein complex PTEN phosphatase complex cell-cell junction plastid nucleoid extracellular space extracellular matrix extracellular organelle
Mitochondrial nucleoid, plastid nucleoid and membrane protein complex are parts of approximately 1 parts or physical objects
mitochondrial nucleoid plastid nucleoid membrane protein complex
action approx
action union
action find_tuple_counts
relation part of
type cellular component
type part
action find_tuple_counts
relation part of
type cellular component
type physical object
value 1
[{'concept': 'cellular component'}, 'part of', [{'concept': 'part'}, {'concept': 'physical object'}]]
SELECT DISTINCT ?c WHERE { { SELECT DISTINCT ?c ( COUNT ( ?r ) AS ?z ) WHERE { { ?c rdf:type ontology:cellular_component . ?r rdf:type ontology:physical_object . ?c property:part_of ?r } UNION { ?c property:part_of ?r . ?c rdf:type ontology:cellular_component . ?r rdf:type ontology:part } } GROUP BY ?c } . FILTER ( ?z = 1 ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23093869 Q18298182
P688
Q181394
USER
Which nutrients are Lrfn3 or FimH-like protein    SF0942 an encoding of ?
OR((Q18298182,P688,c(Q181394)), (Q23093869,P688,c(Q181394)))
action filter_type
action union
action find
entity Q18298182
relation P688
action find
entity Q23093869
relation P688
type Q181394
{'OR': [['Q18298182', 'P688', {'concept': 'Q181394'}], ['Q23093869', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?j WHERE { { { resource:Q18298182 property:P688 ?j } UNION { resource:Q23093869 property:P688 ?j } } . ?j rdf:type ontology:Q181394 }
FimH-like protein    SF0942 Lrfn3
action filter_type
action union
action find
entity Lrfn3
relation encodes
action find
entity FimH-like protein    SF0942
relation encodes
type nutrient
{'OR': [['Lrfn3', 'encodes', {'concept': 'nutrient'}], ['FimH-like protein    SF0942', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?j WHERE { { { resource:Lrfn3 property:encodes ?j } UNION { resource:FimH-like_protein____SF0942 property:encodes ?j } } . ?j rdf:type ontology:nutrient }
[]
nutrient
Q23420858 Q21987186
SYSTEM
FimH-like protein    SF0942, Leucine-rich repeat and fibronectin type-III domain-containing protein 3
Q23420858 Q21987186
OR((Q18298182,P688,c(Q181394)), (Q23093869,P688,c(Q181394)))
action filter_type
action union
action find
entity Q18298182
relation P688
action find
entity Q23093869
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q18298182', 'P688', {'concept': 'Q181394'}], ['Q23093869', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?j WHERE { { { resource:Q18298182 property:P688 ?j } UNION { resource:Q23093869 property:P688 ?j } } . ?j rdf:type ontology:Q181394 }
FimH-like protein    SF0942 Leucine-rich repeat and fibronectin type-III domain-containing protein 3
FimH-like protein SF0942 and Leucine-rich repeat and fibronectin type-III domain-containing protein 3 are Lrfn3 or FimH-like protein SF0942 an encoding of
FimH-like protein    SF0942 Leucine-rich repeat and fibronectin type-III domain-containing protein 3
action filter_type
action union
action find
entity Lrfn3
relation encodes
action find
entity FimH-like protein    SF0942
relation encodes
type nutrient
{'OR': [['Lrfn3', 'encodes', {'concept': 'nutrient'}], ['FimH-like protein    SF0942', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?j WHERE { { { resource:Lrfn3 property:encodes ?j } UNION { resource:FimH-like_protein____SF0942 property:encodes ?j } } . ?j rdf:type ontology:nutrient }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type
Q14865172
P682
Q3249551 Q181394
USER
Which processes are approximately the same number of nutrients involved in as signaling ?
(c(Q181394),P682,c(Q3249551))
action approx
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find
entity Q14865172
relation P682
type Q3249551
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ( COUNT ( ?o ) AS ?j ) WHERE { resource:Q14865172 property:P682 ?o . ?o rdf:type ontology:Q3249551 } } . FILTER ( ?q = ?j ) . { SELECT DISTINCT ?p ( COUNT ( ?f ) AS ?q ) WHERE { ?f property:P682 ?p . ?f rdf:type ontology:Q181394 . ?p rdf:type ontology:Q3249551 } GROUP BY ?p } }
signaling
action approx
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find
entity signaling
relation biological process
type process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ( COUNT ( ?o ) AS ?j ) WHERE { resource:signaling property:biological_process ?o . ?o rdf:type ontology:process } } . FILTER ( ?q = ?j ) . { SELECT DISTINCT ?p ( COUNT ( ?f ) AS ?q ) WHERE { ?f property:biological_process ?p . ?f rdf:type ontology:nutrient . ?p rdf:type ontology:process } GROUP BY ?p } }
[]
process nutrient
Q306383 Q14885910 Q162925
SYSTEM
G1/S transition of mitotic cell cycle, reproductive process, meiotic nuclear division
Q22269718 Q306383 Q14820058 Q22284496 Q22271548 Q9332 Q22293230 Q14873025 Q14916317 Q14859560 Q14865172 Q14885910 Q14864472 Q162925
(c(Q181394),P682,c(Q3249551))
action approx
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find
entity Q14865172
relation P682
type Q3249551
[ANSWERS] are approximately the same number of nutrients involved in as signaling
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ( COUNT ( ?o ) AS ?j ) WHERE { resource:Q14865172 property:P682 ?o . ?o rdf:type ontology:Q3249551 } } . FILTER ( ?q = ?j ) . { SELECT DISTINCT ?p ( COUNT ( ?f ) AS ?q ) WHERE { ?f property:P682 ?p . ?f rdf:type ontology:Q181394 . ?p rdf:type ontology:Q3249551 } GROUP BY ?p } }
locomotion G1/S transition of mitotic cell cycle growth biological regulation cell killing behavior developmental process cellular process immune system process response to stimulus signaling reproductive process rhythmic process meiotic nuclear division
G1/S transition of mitotic cell cycle, reproductive process and meiotic nuclear division are approximately the same number of nutrients involved in as signaling
G1/S transition of mitotic cell cycle reproductive process meiotic nuclear division
action approx
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find
entity signaling
relation biological process
type process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ( COUNT ( ?o ) AS ?j ) WHERE { resource:signaling property:biological_process ?o . ?o rdf:type ontology:process } } . FILTER ( ?q = ?j ) . { SELECT DISTINCT ?p ( COUNT ( ?f ) AS ?q ) WHERE { ?f property:biological_process ?p . ?f rdf:type ontology:nutrient . ?p rdf:type ontology:process } GROUP BY ?p } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Incomplete
Q22293230
P682
Q3249551 Q181394
USER
And what about developmental process?
(c(Q181394),P682,c(Q3249551))
action approx
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find
entity Q22293230
relation P682
type Q3249551
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ?w ( COUNT ( ?g ) AS ?r ) WHERE { ?g property:P682 ?w . ?w rdf:type ontology:Q3249551 . ?g rdf:type ontology:Q181394 } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?u ) WHERE { resource:Q22293230 property:P682 ?e . ?e rdf:type ontology:Q3249551 } } . FILTER ( ?r = ?u ) }
developmental process
action approx
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find
entity developmental process
relation biological process
type process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ?w ( COUNT ( ?g ) AS ?r ) WHERE { ?g property:biological_process ?w . ?w rdf:type ontology:process . ?g rdf:type ontology:nutrient } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?u ) WHERE { resource:developmental_process property:biological_process ?e . ?e rdf:type ontology:process } } . FILTER ( ?r = ?u ) }
[]
process nutrient
Q306383 Q14885910 Q162925
SYSTEM
G1/S transition of mitotic cell cycle, reproductive process, meiotic nuclear division
Q22269718 Q306383 Q14820058 Q22284496 Q22271548 Q9332 Q22293230 Q14873025 Q14916317 Q14859560 Q14865172 Q14885910 Q14864472 Q162925
(c(Q181394),P682,c(Q3249551))
action approx
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find
entity Q22293230
relation P682
type Q3249551
[ANSWERS]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ?w ( COUNT ( ?g ) AS ?r ) WHERE { ?g property:P682 ?w . ?w rdf:type ontology:Q3249551 . ?g rdf:type ontology:Q181394 } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?u ) WHERE { resource:Q22293230 property:P682 ?e . ?e rdf:type ontology:Q3249551 } } . FILTER ( ?r = ?u ) }
locomotion G1/S transition of mitotic cell cycle growth biological regulation cell killing behavior developmental process cellular process immune system process response to stimulus signaling reproductive process rhythmic process meiotic nuclear division
G1/S transition of mitotic cell cycle reproductive process meiotic nuclear division
action approx
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find
entity developmental process
relation biological process
type process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ?w ( COUNT ( ?g ) AS ?r ) WHERE { ?g property:biological_process ?w . ?w rdf:type ontology:process . ?g rdf:type ontology:nutrient } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?u ) WHERE { resource:developmental_process property:biological_process ?e . ?e rdf:type ontology:process } } . FILTER ( ?r = ?u ) }
[]