Simple Question (Direct)
Simple Question
Q23477942
P702
Q863908
USER
Which gene encodes molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537 ?
(Q23477942,P702,c(Q863908))
action filter_type
action find
entity Q23477942
relation P702
type Q863908
['Q23477942', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?b WHERE { resource:Q23477942 property:P702 ?b . ?b rdf:type ontology:Q863908 }
molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
action filter_type
action find
entity molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
relation encoded by
type nucleic acid sequence
['molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?b WHERE { resource:molybdopterin-guanine_dinucleotide_biosynthesis_protein_MobA____SAOUHSC_02537 property:encoded_by ?b . ?b rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23172082
SYSTEM
molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
Q23172082
(Q23477942,P702,c(Q863908))
action filter_type
action find
entity Q23477942
relation P702
type Q863908
Molybdopterin-guanine dinucleotide biosynthesis protein MobA SAOUHSC 02537 encodes molybdopterin-guanine dinucleotide biosynthesis protein MobA SAOUHSC_02537
['Q23477942', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?b WHERE { resource:Q23477942 property:P702 ?b . ?b rdf:type ontology:Q863908 }
molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
Molybdopterin-guanine dinucleotide biosynthesis protein MobA SAOUHSC 02537 encodes molybdopterin-guanine dinucleotide biosynthesis protein MobA SAOUHSC_02537
molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
action filter_type
action find
entity molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
relation encoded by
type nucleic acid sequence
['molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?b WHERE { resource:molybdopterin-guanine_dinucleotide_biosynthesis_protein_MobA____SAOUHSC_02537 property:encoded_by ?b . ?b rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23477942
P681
Q15989253
USER
What is a component of molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537 ?
(Q23477942,P681,c(Q15989253))
action filter_type
action find
entity Q23477942
relation P681
type Q15989253
['Q23477942', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q15989253 . resource:Q23477942 property:P681 ?p }
molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
action filter_type
action find
entity molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
relation cell component
type part
['molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:part . resource:molybdopterin-guanine_dinucleotide_biosynthesis_protein_MobA____SAOUHSC_02537 property:cell_component ?p }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23477942,P681,c(Q15989253))
action filter_type
action find
entity Q23477942
relation P681
type Q15989253
A component of molybdopterin-guanine dinucleotide biosynthesis protein MobA SAOUHSC_02537 is a [ANSWER]
['Q23477942', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q15989253 . resource:Q23477942 property:P681 ?p }
cytoplasm
A component of molybdopterin-guanine dinucleotide biosynthesis protein MobA SAOUHSC_02537 is a cytoplasm
cytoplasm
action filter_type
action find
entity molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
relation cell component
type part
['molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:part . resource:molybdopterin-guanine_dinucleotide_biosynthesis_protein_MobA____SAOUHSC_02537 property:cell_component ?p }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21495852
Q15989253
USER
And how about HIG1 domain family member 1A, mitochondrial?
(Q21495852,P681,c(Q15989253))
action filter_type
action find
entity Q21495852
relation P681
type Q15989253
['Q21495852', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?x WHERE { resource:Q21495852 property:P681 ?x . ?x rdf:type ontology:Q15989253 }
HIG1 domain family member 1A, mitochondrial
action filter_type
action find
entity HIG1 domain family member 1A, mitochondrial
relation cell component
type part
['HIG1 domain family member 1A, mitochondrial', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?x WHERE { resource:HIG1_domain_family_member_1A,_mitochondrial property:cell_component ?x . ?x rdf:type ontology:part }
[]
part
Q14349455 Q39572 Q40260
SYSTEM
membrane, mitochondrion, nucleus
Q14349455 Q39572 Q40260
(Q21495852,P681,c(Q15989253))
action filter_type
action find
entity Q21495852
relation P681
type Q15989253
[ANSWERS]
['Q21495852', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?x WHERE { resource:Q21495852 property:P681 ?x . ?x rdf:type ontology:Q15989253 }
membrane mitochondrion nucleus
membrane mitochondrion nucleus
action filter_type
action find
entity HIG1 domain family member 1A, mitochondrial
relation cell component
type part
['HIG1 domain family member 1A, mitochondrial', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?x WHERE { resource:HIG1_domain_family_member_1A,_mitochondrial property:cell_component ?x . ?x rdf:type ontology:part }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q21495852
P688
Q863908
USER
How many nucleic acid sequences encode HIG1 domain family member 1A, mitochondrial ?
(c(Q863908),P688,Q21495852)
action count
action filter_type
action find_reverse
entity Q21495852
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21495852']
SELECT DISTINCT ( COUNT ( ?p ) AS ?m ) WHERE { ?p property:P688 resource:Q21495852 . ?p rdf:type ontology:Q863908 }
HIG1 domain family member 1A, mitochondrial
action count
action filter_type
action find_reverse
entity HIG1 domain family member 1A, mitochondrial
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'HIG1 domain family member 1A, mitochondrial']
SELECT DISTINCT ( COUNT ( ?p ) AS ?m ) WHERE { ?p property:encodes resource:HIG1_domain_family_member_1A,_mitochondrial . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q18258358
(c(Q863908),P688,Q21495852)
action count
action filter_type
action find_reverse
entity Q21495852
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q21495852']
SELECT DISTINCT ( COUNT ( ?p ) AS ?m ) WHERE { ?p property:P688 resource:Q21495852 . ?p rdf:type ontology:Q863908 }
Higd1a
1
action count
action filter_type
action find_reverse
entity HIG1 domain family member 1A, mitochondrial
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'HIG1 domain family member 1A, mitochondrial']
SELECT DISTINCT ( COUNT ( ?p ) AS ?m ) WHERE { ?p property:encodes resource:HIG1_domain_family_member_1A,_mitochondrial . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q23494929
P688
Q863908
USER
And also tell me about hypothetical protein    spr0367?
(c(Q863908),P688,Q23494929)
action count
action filter_type
action find_reverse
entity Q23494929
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23494929']
SELECT DISTINCT ( COUNT ( ?h ) AS ?b ) WHERE { ?h property:P688 resource:Q23494929 . ?h rdf:type ontology:Q863908 }
hypothetical protein    spr0367
action count
action filter_type
action find_reverse
entity hypothetical protein    spr0367
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    spr0367']
SELECT DISTINCT ( COUNT ( ?h ) AS ?b ) WHERE { ?h property:encodes resource:hypothetical_protein____spr0367 . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q23228952
(c(Q863908),P688,Q23494929)
action count
action filter_type
action find_reverse
entity Q23494929
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q23494929']
SELECT DISTINCT ( COUNT ( ?h ) AS ?b ) WHERE { ?h property:P688 resource:Q23494929 . ?h rdf:type ontology:Q863908 }
hypothetical protein    spr0367
1
action count
action filter_type
action find_reverse
entity hypothetical protein    spr0367
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    spr0367']
SELECT DISTINCT ( COUNT ( ?h ) AS ?b ) WHERE { ?h property:encodes resource:hypothetical_protein____spr0367 . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23172082
P703
Q631147
USER
What is the taxon to which molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537 belongs to ?
(Q23172082,P703,c(Q631147))
action filter_type
action find
entity Q23172082
relation P703
type Q631147
['Q23172082', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q631147 . resource:Q23172082 property:P703 ?p }
molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
action filter_type
action find
entity molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
relation found in taxon
type infraspecific name
['molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:infraspecific_name . resource:molybdopterin-guanine_dinucleotide_biosynthesis_protein_MobA____SAOUHSC_02537 property:found_in_taxon ?p }
[]
infraspecific name
Q21102956
SYSTEM
Staphylococcus aureus subsp. aureus NCTC 8325
Q21102956
(Q23172082,P703,c(Q631147))
action filter_type
action find
entity Q23172082
relation P703
type Q631147
[ANSWER]
['Q23172082', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q631147 . resource:Q23172082 property:P703 ?p }
Staphylococcus aureus subsp. aureus NCTC 8325
Staphylococcus aureus subsp. aureus NCTC 8325
Staphylococcus aureus subsp. aureus NCTC 8325
action filter_type
action find
entity molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537
relation found in taxon
type infraspecific name
['molybdopterin-guanine dinucleotide biosynthesis protein MobA    SAOUHSC_02537', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:infraspecific_name . resource:molybdopterin-guanine_dinucleotide_biosynthesis_protein_MobA____SAOUHSC_02537 property:found_in_taxon ?p }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23237546
Q631147
USER
And also tell me about hypothetical protein    smi_1287?
(Q23237546,P703,c(Q631147))
action filter_type
action find
entity Q23237546
relation P703
type Q631147
['Q23237546', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?g WHERE { resource:Q23237546 property:P703 ?g . ?g rdf:type ontology:Q631147 }
hypothetical protein    smi_1287
action filter_type
action find
entity hypothetical protein    smi_1287
relation found in taxon
type infraspecific name
['hypothetical protein    smi_1287', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?g WHERE { resource:hypothetical_protein____smi_1287 property:found_in_taxon ?g . ?g rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102994
SYSTEM
Streptococcus mitis B6
Q21102994
(Q23237546,P703,c(Q631147))
action filter_type
action find
entity Q23237546
relation P703
type Q631147
[ANSWER]
['Q23237546', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?g WHERE { resource:Q23237546 property:P703 ?g . ?g rdf:type ontology:Q631147 }
Streptococcus mitis B6
Streptococcus mitis B6
action filter_type
action find
entity hypothetical protein    smi_1287
relation found in taxon
type infraspecific name
['hypothetical protein    smi_1287', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?g WHERE { resource:hypothetical_protein____smi_1287 property:found_in_taxon ?g . ?g rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P361
Q15989253 Q5058355 Q234460
USER
Which parts are approximately 4 cellular components and texts a portion of ?
(c(Q5058355)|c(Q234460),P361,c(Q15989253))
action approx
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q234460
value 4
[[{'concept': 'Q5058355'}, {'concept': 'Q234460'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?s ) WHERE { ?x rdf:type ?c . VALUES ( ?c ) { ( ontology:Q5058355 ) ( ontology:Q234460 ) } } GROUP BY ?b } . FILTER ( ?s = 4 ) }
action approx
action union
action find_reverse_tuple_counts
relation part of
type part
type cellular component
action find_reverse_tuple_counts
relation part of
type part
type text
value 4
[[{'concept': 'cellular component'}, {'concept': 'text'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?s ) WHERE { ?x rdf:type ?c . VALUES ( ?c ) { ( ontology:cellular_component ) ( ontology:text ) } } GROUP BY ?b } . FILTER ( ?s = 4 ) }
[]
part cellular component text
Q187181 Q14645596
SYSTEM
synapse, extracellular region
Q187181 Q14645596
(c(Q5058355)|c(Q234460),P361,c(Q15989253))
action approx
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q234460
value 4
[ANSWERS] are approximately 4 cellular components and texts a portion of
[[{'concept': 'Q5058355'}, {'concept': 'Q234460'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?s ) WHERE { ?x rdf:type ?c . VALUES ( ?c ) { ( ontology:Q5058355 ) ( ontology:Q234460 ) } } GROUP BY ?b } . FILTER ( ?s = 4 ) }
synapse extracellular region
Synapse and extracellular region are approximately 4 cellular components and texts a portion of
synapse extracellular region
action approx
action union
action find_reverse_tuple_counts
relation part of
type part
type cellular component
action find_reverse_tuple_counts
relation part of
type part
type text
value 4
[[{'concept': 'cellular component'}, {'concept': 'text'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?s ) WHERE { ?x rdf:type ?c . VALUES ( ?c ) { ( ontology:cellular_component ) ( ontology:text ) } } GROUP BY ?b } . FILTER ( ?s = 4 ) }
[]