Simple Question (Direct)
Simple Question
Q24282112
P680
Q44424
USER
What represents the molecular function of ferrous iron transport protein FeoC    O3K_02010 ?
(Q24282112,P680,c(Q44424))
action filter_type
action find
entity Q24282112
relation P680
type Q44424
['Q24282112', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:Q44424 . resource:Q24282112 property:P680 ?k }
ferrous iron transport protein FeoC    O3K_02010
action filter_type
action find
entity ferrous iron transport protein FeoC    O3K_02010
relation molecular function
type chemical bond
['ferrous iron transport protein FeoC    O3K_02010', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:chemical_bond . resource:ferrous_iron_transport_protein_FeoC____O3K_02010 property:molecular_function ?k }
[]
chemical bond
Q13667380 Q14358439
SYSTEM
metal ion binding, iron ion binding
Q13667380 Q14358439
(Q24282112,P680,c(Q44424))
action filter_type
action find
entity Q24282112
relation P680
type Q44424
[ANSWERS] represent the molecular function of ferrous iron transport protein FeoC O3K_02010
['Q24282112', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:Q44424 . resource:Q24282112 property:P680 ?k }
metal ion binding iron ion binding
Metal ion binding and iron ion binding represent the molecular function of ferrous iron transport protein FeoC O3K_02010
metal ion binding iron ion binding
action filter_type
action find
entity ferrous iron transport protein FeoC    O3K_02010
relation molecular function
type chemical bond
['ferrous iron transport protein FeoC    O3K_02010', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:chemical_bond . resource:ferrous_iron_transport_protein_FeoC____O3K_02010 property:molecular_function ?k }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24282112
P702
Q863908
USER
Which nucleic acid sequence encodes ferrous iron transport protein FeoC    O3K_02010 ?
(Q24282112,P702,c(Q863908))
action filter_type
action find
entity Q24282112
relation P702
type Q863908
['Q24282112', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?u WHERE { resource:Q24282112 property:P702 ?u . ?u rdf:type ontology:Q863908 }
ferrous iron transport protein FeoC    O3K_02010
action filter_type
action find
entity ferrous iron transport protein FeoC    O3K_02010
relation encoded by
type nucleic acid sequence
['ferrous iron transport protein FeoC    O3K_02010', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?u WHERE { resource:ferrous_iron_transport_protein_FeoC____O3K_02010 property:encoded_by ?u . ?u rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23119542
SYSTEM
ferrous iron transport protein FeoC    O3K_02010
Q23119542
(Q24282112,P702,c(Q863908))
action filter_type
action find
entity Q24282112
relation P702
type Q863908
Ferrous iron transport protein FeoC O3K 02010 encodes ferrous iron transport protein FeoC O3K_02010
['Q24282112', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?u WHERE { resource:Q24282112 property:P702 ?u . ?u rdf:type ontology:Q863908 }
ferrous iron transport protein FeoC    O3K_02010
Ferrous iron transport protein FeoC O3K 02010 encodes ferrous iron transport protein FeoC O3K_02010
ferrous iron transport protein FeoC    O3K_02010
action filter_type
action find
entity ferrous iron transport protein FeoC    O3K_02010
relation encoded by
type nucleic acid sequence
['ferrous iron transport protein FeoC    O3K_02010', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?u WHERE { resource:ferrous_iron_transport_protein_FeoC____O3K_02010 property:encoded_by ?u . ?u rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q23119542 Q24282112
P688
Q181394
USER
Is ferrous iron transport protein FeoC    O3K_02010 encoded by that nucleic acid sequence ?
(Q23119542,P688,Q24282112)
action is_in
entity Q24282112
action find
entity Q23119542
relation P688
['Q23119542', 'P688', 'Q24282112']
ASK WHERE { resource:Q23119542 property:P688 resource:Q24282112 }
ferrous iron transport protein FeoC    O3K_02010 ferrous iron transport protein FeoC    O3K_02010
action is_in
entity ferrous iron transport protein FeoC    O3K_02010
action find
entity ferrous iron transport protein FeoC    O3K_02010
relation encodes
['ferrous iron transport protein FeoC    O3K_02010', 'encodes', 'ferrous iron transport protein FeoC    O3K_02010']
ASK WHERE { resource:ferrous_iron_transport_protein_FeoC____O3K_02010 property:encodes resource:ferrous_iron_transport_protein_FeoC____O3K_02010 }
[]
nutrient
SYSTEM
YES
(Q23119542,P688,Q24282112)
action is_in
entity Q24282112
action find
entity Q23119542
relation P688
[ANSWER]
['Q23119542', 'P688', 'Q24282112']
ASK WHERE { resource:Q23119542 property:P688 resource:Q24282112 }
Yes
action is_in
entity ferrous iron transport protein FeoC    O3K_02010
action find
entity ferrous iron transport protein FeoC    O3K_02010
relation encodes
['ferrous iron transport protein FeoC    O3K_02010', 'encodes', 'ferrous iron transport protein FeoC    O3K_02010']
ASK WHERE { resource:ferrous_iron_transport_protein_FeoC____O3K_02010 property:encodes resource:ferrous_iron_transport_protein_FeoC____O3K_02010 }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q24280542 Q24282112
P703
Q631147
USER
Which infraspecific names are ferrous iron transport protein FeoC    O3K_02010 or alkanesulfonate transporter permease    O3K_16670 found ?
OR((Q24282112,P703,c(Q631147)), (Q24280542,P703,c(Q631147)))
action filter_type
action union
action find
entity Q24282112
relation P703
action find
entity Q24280542
relation P703
type Q631147
{'OR': [['Q24282112', 'P703', {'concept': 'Q631147'}], ['Q24280542', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?n WHERE { { VALUES ( ?d ) { ( resource:Q24280542 ) ( resource:Q24282112 ) } . ?d property:P703 ?n } . ?n rdf:type ontology:Q631147 }
alkanesulfonate transporter permease    O3K_16670 ferrous iron transport protein FeoC    O3K_02010
action filter_type
action union
action find
entity ferrous iron transport protein FeoC    O3K_02010
relation found in taxon
action find
entity alkanesulfonate transporter permease    O3K_16670
relation found in taxon
type infraspecific name
{'OR': [['ferrous iron transport protein FeoC    O3K_02010', 'found in taxon', {'concept': 'infraspecific name'}], ['alkanesulfonate transporter permease    O3K_16670', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?n WHERE { { VALUES ( ?d ) { ( resource:alkanesulfonate_transporter_permease____O3K_16670 ) ( resource:ferrous_iron_transport_protein_FeoC____O3K_02010 ) } . ?d property:found_in_taxon ?n } . ?n rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102937
SYSTEM
Escherichia coli O104:H4 str. 2011C-3493
Q21102937
OR((Q24282112,P703,c(Q631147)), (Q24280542,P703,c(Q631147)))
action filter_type
action union
action find
entity Q24282112
relation P703
action find
entity Q24280542
relation P703
type Q631147
[ANSWER] is ferrous iron transport protein FeoC O3K_02010 or alkanesulfonate transporter permease O3K_16670 found
{'OR': [['Q24282112', 'P703', {'concept': 'Q631147'}], ['Q24280542', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?n WHERE { { VALUES ( ?d ) { ( resource:Q24280542 ) ( resource:Q24282112 ) } . ?d property:P703 ?n } . ?n rdf:type ontology:Q631147 }
Escherichia coli O104:H4 str. 2011C-3493
Escherichia coli O104:H4 str. 2011C-3493 is ferrous iron transport protein FeoC O3K_02010 or alkanesulfonate transporter permease O3K_16670 found
Escherichia coli O104:H4 str. 2011C-3493
action filter_type
action union
action find
entity ferrous iron transport protein FeoC    O3K_02010
relation found in taxon
action find
entity alkanesulfonate transporter permease    O3K_16670
relation found in taxon
type infraspecific name
{'OR': [['ferrous iron transport protein FeoC    O3K_02010', 'found in taxon', {'concept': 'infraspecific name'}], ['alkanesulfonate transporter permease    O3K_16670', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?n WHERE { { VALUES ( ?d ) { ( resource:alkanesulfonate_transporter_permease____O3K_16670 ) ( resource:ferrous_iron_transport_protein_FeoC____O3K_02010 ) } . ?d property:found_in_taxon ?n } . ?n rdf:type ontology:infraspecific_name }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23501001
Q631147
USER
And what about hypothetical protein    EF0626?
(Q23501001,P703,c(Q631147))
action filter_type
action find
entity Q23501001
relation P703
type Q631147
['Q23501001', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:Q631147 . resource:Q23501001 property:P703 ?n }
hypothetical protein    EF0626
action filter_type
action find
entity hypothetical protein    EF0626
relation found in taxon
type infraspecific name
['hypothetical protein    EF0626', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:infraspecific_name . resource:hypothetical_protein____EF0626 property:found_in_taxon ?n }
[]
infraspecific name
Q21102965
SYSTEM
Enterococcus faecalis V583
Q21102965
(Q23501001,P703,c(Q631147))
action filter_type
action find
entity Q23501001
relation P703
type Q631147
[ANSWER]
['Q23501001', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:Q631147 . resource:Q23501001 property:P703 ?n }
Enterococcus faecalis V583
Enterococcus faecalis V583
action filter_type
action find
entity hypothetical protein    EF0626
relation found in taxon
type infraspecific name
['hypothetical protein    EF0626', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:infraspecific_name . resource:hypothetical_protein____EF0626 property:found_in_taxon ?n }
[]