Simple Question (Direct)
Simple Question
Q23504701
P682
Q2996394
USER
Which biological process is chaperone DnaJ    HMPREF0351_11650 involved in ?
(Q23504701,P682,c(Q2996394))
action filter_type
action find
entity Q23504701
relation P682
type Q2996394
['Q23504701', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?t WHERE { resource:Q23504701 property:P682 ?t . ?t rdf:type ontology:Q2996394 }
chaperone DnaJ    HMPREF0351_11650
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation biological process
type biological process
['chaperone DnaJ    HMPREF0351_11650', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?t WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:biological_process ?t . ?t rdf:type ontology:biological_process }
[]
biological process
Q847556
SYSTEM
protein folding
Q847556
(Q23504701,P682,c(Q2996394))
action filter_type
action find
entity Q23504701
relation P682
type Q2996394
[ANSWER] is chaperone DnaJ HMPREF0351_11650 involved in
['Q23504701', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?t WHERE { resource:Q23504701 property:P682 ?t . ?t rdf:type ontology:Q2996394 }
protein folding
Protein folding is chaperone DnaJ HMPREF0351_11650 involved in
protein folding
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation biological process
type biological process
['chaperone DnaJ    HMPREF0351_11650', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?t WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:biological_process ?t . ?t rdf:type ontology:biological_process }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23504701
P703
Q631147
USER
Which infraspecific name is chaperone DnaJ    HMPREF0351_11650 found in ?
(Q23504701,P703,c(Q631147))
action filter_type
action find
entity Q23504701
relation P703
type Q631147
['Q23504701', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?x WHERE { resource:Q23504701 property:P703 ?x . ?x rdf:type ontology:Q631147 }
chaperone DnaJ    HMPREF0351_11650
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation found in taxon
type infraspecific name
['chaperone DnaJ    HMPREF0351_11650', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?x WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:found_in_taxon ?x . ?x rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102966
SYSTEM
Enterococcus faecium DO
Q21102966
(Q23504701,P703,c(Q631147))
action filter_type
action find
entity Q23504701
relation P703
type Q631147
[ANSWER] is chaperone DnaJ HMPREF0351_11650 found in
['Q23504701', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?x WHERE { resource:Q23504701 property:P703 ?x . ?x rdf:type ontology:Q631147 }
Enterococcus faecium DO
Enterococcus faecium DO is chaperone DnaJ HMPREF0351_11650 found in
Enterococcus faecium DO
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation found in taxon
type infraspecific name
['chaperone DnaJ    HMPREF0351_11650', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?x WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:found_in_taxon ?x . ?x rdf:type ontology:infraspecific_name }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q22269731
P361
Q334166 Q151885 Q2996394
USER
Which biological processes are parts of lesser number of modes of transport or concepts than movement in environment of other organism involved in symbiotic interaction ?
(c(Q2996394),P361,c(Q334166)|c(Q151885))
action less
action union
action find_tuple_counts
relation P361
type Q2996394
type Q334166
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action count
action filter_multi_types
action find
entity Q22269731
relation P361
type Q334166
type Q151885
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q334166'}, {'concept': 'Q151885'}]]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ?u ( COUNT ( ?m ) AS ?h ) WHERE { { ?u property:P361 ?m . ?u rdf:type ontology:Q2996394 . ?m rdf:type ontology:Q334166 } UNION { ?u property:P361 ?m . ?u rdf:type ontology:Q2996394 . ?m rdf:type ontology:Q151885 } } GROUP BY ?u } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?n ) WHERE { resource:Q22269731 property:P361 ?e . { { ?e rdf:type ontology:Q334166 } UNION { ?e rdf:type ontology:Q151885 } } } } . FILTER ( ?h < ?n ) }
movement in environment of other organism involved in symbiotic interaction
action less
action union
action find_tuple_counts
relation part of
type biological process
type mode of transport
action find_tuple_counts
relation part of
type biological process
type concept
action count
action filter_multi_types
action find
entity movement in environment of other organism involved in symbiotic interaction
relation part of
type mode of transport
type concept
[{'concept': 'biological process'}, 'part of', [{'concept': 'mode of transport'}, {'concept': 'concept'}]]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ?u ( COUNT ( ?m ) AS ?h ) WHERE { { ?u property:part_of ?m . ?u rdf:type ontology:biological_process . ?m rdf:type ontology:mode_of_transport } UNION { ?u property:part_of ?m . ?u rdf:type ontology:biological_process . ?m rdf:type ontology:concept } } GROUP BY ?u } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?n ) WHERE { resource:movement_in_environment_of_other_organism_involved_in_symbiotic_interaction property:part_of ?e . { { ?e rdf:type ontology:mode_of_transport } UNION { ?e rdf:type ontology:concept } } } } . FILTER ( ?h < ?n ) }
[]
mode of transport concept biological process
Q14877671 Q11995 Q22291145
SYSTEM
cartilage condensation, pregnancy, establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
Q22294591 Q22294593 Q22290970 Q22294595 Q22272234 Q14862258 Q24457453 Q14904219 Q83944 Q22289032 Q22271492 Q22271494 Q22294752 Q17342249 Q22294585 Q21122953 Q21104659 Q22294615 Q14860198 Q15325345 Q1115221 Q1759895 Q24459941 Q22291478 Q949618 Q14897640 Q21116174 Q14877671 Q21097540 Q14864099 Q21103041 Q21444598 Q21136671 Q22280551 Q21111890 Q22292538 Q14863654 Q22271536 Q22279989 Q27122058 Q14865397 Q22294630 Q14859996 Q14865659 Q14914558 Q22294730 Q21171796 Q22294732 Q22294734 Q22294736 Q22294738 Q22294637 Q22269960 Q21149516 Q22279515 Q22279517 Q2405495 Q22281166 Q11995 Q22284167 Q22289068 Q16007097 Q22279591 Q22289779 Q22294644 Q22294647 Q15320925 Q22291145 Q22294723 Q22311434 Q163261 Q22294726 Q614138 Q22294728 Q22294486 Q21127160 Q22269715 Q21750263 Q333666 Q22289309 Q22293217 Q22284494 Q22291156 Q22294650 Q21106668 Q22255228 Q22280424 Q14904764 Q21104990 Q14863664 Q22294461 Q22250139 Q21111494 Q22272687 Q17304930 Q22283440 Q22284328 Q21108938 Q14864210 Q22302766 Q21106018 Q22294463 Q14864899 Q22271479 Q14904772 Q14904771 Q14912956 Q22311529 Q22279704 Q22282635 Q21104832 Q22253821 Q21124921 Q22294678 Q22273805 Q22284232 Q21115753 Q24459846 Q14873676 Q22269557 Q21104842 Q21132115 Q21114820 Q22253568 Q22272875
(c(Q2996394),P361,c(Q334166)|c(Q151885))
action less
action union
action find_tuple_counts
relation P361
type Q2996394
type Q334166
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action count
action filter_multi_types
action find
entity Q22269731
relation P361
type Q334166
type Q151885
[ANSWERS] are parts of lesser number of modes of transport or concepts than movement in environment of other organism involved in symbiotic interaction
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q334166'}, {'concept': 'Q151885'}]]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ?u ( COUNT ( ?m ) AS ?h ) WHERE { { ?u property:P361 ?m . ?u rdf:type ontology:Q2996394 . ?m rdf:type ontology:Q334166 } UNION { ?u property:P361 ?m . ?u rdf:type ontology:Q2996394 . ?m rdf:type ontology:Q151885 } } GROUP BY ?u } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?n ) WHERE { resource:Q22269731 property:P361 ?e . { { ?e rdf:type ontology:Q334166 } UNION { ?e rdf:type ontology:Q151885 } } } } . FILTER ( ?h < ?n ) }
mitotic cell cycle arrest in response to pheromone cell wall organization involved in conjugation with cellular fusion protein localization to meiotic spindle pole body reproductive behavior detection of stimulus involved in meiotic cell cycle checkpoint dopamine uptake involved in synaptic transmission induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration developmental process involved in reproduction human evolution actomyosin contractile ring localization detoxification of zinc ion detoxification of arsenic-containing substance modification of morphology or physiology of other organism Ethical attitude adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion male pronucleus assembly detoxification of nitrogen compound luteinizing hormone signaling pathway involved in ovarian follicle development anatomical structure formation involved in morphogenesis pronuclear fusion mores coping manchette assembly pole plasm protein localization Taxis synaptic vesicle docking synaptic vesicle targeting cartilage condensation DNA methylation involved in gamete generation ovulation cycle process protein unfolding positive regulation of flagellated sperm motility involved in capacitation female pronucleus assembly gene conversion at mating-type locus, termination of copy-synthesis synaptic vesicle priming cytoplasmic transport, nurse cell to oocyte multicellular organismal reproductive process response to pheromone involved in conjugation with cellular fusion gene conversion at mating-type locus, DNA double-strand break processing synaptic vesicle tethering involved in synaptic vesicle exocytosis T cell selection fusome organization mesenchymal smoothened signaling pathway involved in prostate gland development tolerance induction nitrogen compound metabolic process karyogamy involved in conjugation with cellular fusion nitric oxide storage maintenance of floral organ identity negative regulation of progesterone biosynthesis involved in luteolysis transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission cell adhesion involved in prostatic bud elongation karyosome formation pollen tube guidance organic substance metabolic process gene conversion at mating-type locus heteroduplex formation involved in gene conversion at mating-type locus territorial behaviour gene conversion at mating-type locus, DNA double-strand break formation pregnancy peptidyl-serine phosphorylation involved in acrosome reaction pole plasm RNA localization habit strand invasion involved in gene conversion at mating-type locus bicoid mRNA localization Wnt signaling pathway involved in animal/vegetal axis specification female germline ring canal formation, actin assembly locomotion involved in locomotory behavior establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification nurse cell nucleus anchoring B cell selection acrosome reaction DNA recombinase assembly involved in gene conversion at mating-type locus vital function seed oilbody biogenesis signal transduction involved in meiotic cell cycle checkpoint fertilization, exchange of chromosomal proteins budding cell bud growth FtsZ-dependent cytokinesis abscission oocyte nucleus localization involved in oocyte dorsal/ventral axis specification oocyte localization involved in germarium-derived egg chamber formation reproductive process in single-celled organism pronuclear migration generative cell mitosis synaptic vesicle fusion to presynaptic active zone membrane regulation of transcription from RNA polymerase II promoter involved in spermatogenesis somatic diversification of immune receptors primary ovarian follicle growth spermatid nucleus differentiation neurotransmitter secretion border follicle cell delamination meiotic cell cycle process activation of meiosis involved in egg activation response to stimulus involved in regulation of muscle adaptation cell cycle process mucilage metabolic process involved in seed coat development peptide mating pheromone maturation involved in conjugation with cellular fusion preantral ovarian follicle growth anatomical structure morphogenesis calcium-dependent activation of synaptic vesicle fusion cell separation after cytokinesis sperm chromatin decondensation acrosome matrix dispersal mycothiol-dependent detoxification spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation ovarian cumulus expansion antigen sampling in mucosal-associated lymphoid tissue gene conversion at mating-type locus, DNA repair synthesis cell wall macromolecule catabolic process involved in cytogamy synaptic vesicle exocytosis regulation of transcription involved in meiotic cell cycle P granule organization secondary cell wall biogenesis involved in seed trichome differentiation photoperiodism, flowering signal transduction involved in conjugation with cellular fusion behavioral response to nutrient intermicrovillar adhesion cell motility uterine wall growth chromosome localization to nuclear envelope involved in homologous chromosome segregation prevention of polyspermy spermatid nucleus elongation positive regulation of transcription involved in egg activation detection of stimulus involved in meiotic spindle checkpoint
Cartilage condensation, pregnancy and establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification are parts of lesser number of modes of transport or concepts than movement in environment of other organism involved in symbiotic interaction
cartilage condensation pregnancy establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
action less
action union
action find_tuple_counts
relation part of
type biological process
type mode of transport
action find_tuple_counts
relation part of
type biological process
type concept
action count
action filter_multi_types
action find
entity movement in environment of other organism involved in symbiotic interaction
relation part of
type mode of transport
type concept
[{'concept': 'biological process'}, 'part of', [{'concept': 'mode of transport'}, {'concept': 'concept'}]]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ?u ( COUNT ( ?m ) AS ?h ) WHERE { { ?u property:part_of ?m . ?u rdf:type ontology:biological_process . ?m rdf:type ontology:mode_of_transport } UNION { ?u property:part_of ?m . ?u rdf:type ontology:biological_process . ?m rdf:type ontology:concept } } GROUP BY ?u } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?n ) WHERE { resource:movement_in_environment_of_other_organism_involved_in_symbiotic_interaction property:part_of ?e . { { ?e rdf:type ontology:mode_of_transport } UNION { ?e rdf:type ontology:concept } } } } . FILTER ( ?h < ?n ) }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type|Incomplete
Q21107328
P361
Q334166 Q151885 Q2996394
USER
And also tell me about development involved in symbiotic interaction?
(c(Q2996394),P361,c(Q334166)|c(Q151885))
action less
action union
action find_tuple_counts
relation P361
type Q2996394
type Q334166
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action count
action filter_multi_types
action find
entity Q21107328
relation P361
type Q334166
type Q151885
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q334166'}, {'concept': 'Q151885'}]]
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ( COUNT ( ?z ) AS ?r ) WHERE { resource:Q21107328 property:P361 ?z . { ?z rdf:type ?u . VALUES ( ?u ) { ( ontology:Q334166 ) ( ontology:Q151885 ) } } } } . FILTER ( ?m < ?r ) . { SELECT DISTINCT ?s ( COUNT ( ?q ) AS ?m ) WHERE { VALUES ( ?i ) { ( ontology:Q334166 ) ( ontology:Q151885 ) } . ?q rdf:type ?i } GROUP BY ?s } }
development involved in symbiotic interaction
action less
action union
action find_tuple_counts
relation part of
type biological process
type mode of transport
action find_tuple_counts
relation part of
type biological process
type concept
action count
action filter_multi_types
action find
entity development involved in symbiotic interaction
relation part of
type mode of transport
type concept
[{'concept': 'biological process'}, 'part of', [{'concept': 'mode of transport'}, {'concept': 'concept'}]]
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ( COUNT ( ?z ) AS ?r ) WHERE { resource:development_involved_in_symbiotic_interaction property:part_of ?z . { ?z rdf:type ?u . VALUES ( ?u ) { ( ontology:mode_of_transport ) ( ontology:concept ) } } } } . FILTER ( ?m < ?r ) . { SELECT DISTINCT ?s ( COUNT ( ?q ) AS ?m ) WHERE { VALUES ( ?i ) { ( ontology:mode_of_transport ) ( ontology:concept ) } . ?q rdf:type ?i } GROUP BY ?s } }
[]
mode of transport concept biological process
Q14877671 Q11995 Q22291145
SYSTEM
cartilage condensation, pregnancy, establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
Q22294591 Q22294593 Q22290970 Q22294595 Q22272234 Q14862258 Q24457453 Q14904219 Q83944 Q22289032 Q22271492 Q22271494 Q22294752 Q17342249 Q22294585 Q21122953 Q21104659 Q22294615 Q14860198 Q15325345 Q1115221 Q1759895 Q24459941 Q22291478 Q949618 Q14897640 Q21116174 Q14877671 Q21097540 Q14864099 Q21103041 Q21444598 Q21136671 Q22280551 Q21111890 Q22292538 Q14863654 Q22271536 Q22279989 Q27122058 Q14865397 Q22294630 Q14859996 Q14865659 Q14914558 Q22294730 Q21171796 Q22294732 Q22294734 Q22294736 Q22294738 Q22294637 Q22269960 Q21149516 Q22279515 Q22279517 Q2405495 Q22281166 Q11995 Q22284167 Q22289068 Q16007097 Q22279591 Q22289779 Q22294644 Q22294647 Q15320925 Q22291145 Q22294723 Q22311434 Q163261 Q22294726 Q614138 Q22294728 Q22294486 Q21127160 Q22269715 Q21750263 Q333666 Q22289309 Q22293217 Q22284494 Q22291156 Q22294650 Q21106668 Q22255228 Q22280424 Q14904764 Q21104990 Q14863664 Q22294461 Q22250139 Q21111494 Q22272687 Q17304930 Q22283440 Q22284328 Q21108938 Q14864210 Q22302766 Q21106018 Q22294463 Q14864899 Q22271479 Q14904772 Q14904771 Q14912956 Q22311529 Q22279704 Q22282635 Q21104832 Q22253821 Q21124921 Q22294678 Q22273805 Q22284232 Q21115753 Q24459846 Q14873676 Q22269557 Q21104842 Q21132115 Q21114820 Q22253568 Q22272875
(c(Q2996394),P361,c(Q334166)|c(Q151885))
action less
action union
action find_tuple_counts
relation P361
type Q2996394
type Q334166
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action count
action filter_multi_types
action find
entity Q21107328
relation P361
type Q334166
type Q151885
[ANSWERS]
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q334166'}, {'concept': 'Q151885'}]]
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ( COUNT ( ?z ) AS ?r ) WHERE { resource:Q21107328 property:P361 ?z . { ?z rdf:type ?u . VALUES ( ?u ) { ( ontology:Q334166 ) ( ontology:Q151885 ) } } } } . FILTER ( ?m < ?r ) . { SELECT DISTINCT ?s ( COUNT ( ?q ) AS ?m ) WHERE { VALUES ( ?i ) { ( ontology:Q334166 ) ( ontology:Q151885 ) } . ?q rdf:type ?i } GROUP BY ?s } }
mitotic cell cycle arrest in response to pheromone cell wall organization involved in conjugation with cellular fusion protein localization to meiotic spindle pole body reproductive behavior detection of stimulus involved in meiotic cell cycle checkpoint dopamine uptake involved in synaptic transmission induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration developmental process involved in reproduction human evolution actomyosin contractile ring localization detoxification of zinc ion detoxification of arsenic-containing substance modification of morphology or physiology of other organism Ethical attitude adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion male pronucleus assembly detoxification of nitrogen compound luteinizing hormone signaling pathway involved in ovarian follicle development anatomical structure formation involved in morphogenesis pronuclear fusion mores coping manchette assembly pole plasm protein localization Taxis synaptic vesicle docking synaptic vesicle targeting cartilage condensation DNA methylation involved in gamete generation ovulation cycle process protein unfolding positive regulation of flagellated sperm motility involved in capacitation female pronucleus assembly gene conversion at mating-type locus, termination of copy-synthesis synaptic vesicle priming cytoplasmic transport, nurse cell to oocyte multicellular organismal reproductive process response to pheromone involved in conjugation with cellular fusion gene conversion at mating-type locus, DNA double-strand break processing synaptic vesicle tethering involved in synaptic vesicle exocytosis T cell selection fusome organization mesenchymal smoothened signaling pathway involved in prostate gland development tolerance induction nitrogen compound metabolic process karyogamy involved in conjugation with cellular fusion nitric oxide storage maintenance of floral organ identity negative regulation of progesterone biosynthesis involved in luteolysis transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission cell adhesion involved in prostatic bud elongation karyosome formation pollen tube guidance organic substance metabolic process gene conversion at mating-type locus heteroduplex formation involved in gene conversion at mating-type locus territorial behaviour gene conversion at mating-type locus, DNA double-strand break formation pregnancy peptidyl-serine phosphorylation involved in acrosome reaction pole plasm RNA localization habit strand invasion involved in gene conversion at mating-type locus bicoid mRNA localization Wnt signaling pathway involved in animal/vegetal axis specification female germline ring canal formation, actin assembly locomotion involved in locomotory behavior establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification nurse cell nucleus anchoring B cell selection acrosome reaction DNA recombinase assembly involved in gene conversion at mating-type locus vital function seed oilbody biogenesis signal transduction involved in meiotic cell cycle checkpoint fertilization, exchange of chromosomal proteins budding cell bud growth FtsZ-dependent cytokinesis abscission oocyte nucleus localization involved in oocyte dorsal/ventral axis specification oocyte localization involved in germarium-derived egg chamber formation reproductive process in single-celled organism pronuclear migration generative cell mitosis synaptic vesicle fusion to presynaptic active zone membrane regulation of transcription from RNA polymerase II promoter involved in spermatogenesis somatic diversification of immune receptors primary ovarian follicle growth spermatid nucleus differentiation neurotransmitter secretion border follicle cell delamination meiotic cell cycle process activation of meiosis involved in egg activation response to stimulus involved in regulation of muscle adaptation cell cycle process mucilage metabolic process involved in seed coat development peptide mating pheromone maturation involved in conjugation with cellular fusion preantral ovarian follicle growth anatomical structure morphogenesis calcium-dependent activation of synaptic vesicle fusion cell separation after cytokinesis sperm chromatin decondensation acrosome matrix dispersal mycothiol-dependent detoxification spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation ovarian cumulus expansion antigen sampling in mucosal-associated lymphoid tissue gene conversion at mating-type locus, DNA repair synthesis cell wall macromolecule catabolic process involved in cytogamy synaptic vesicle exocytosis regulation of transcription involved in meiotic cell cycle P granule organization secondary cell wall biogenesis involved in seed trichome differentiation photoperiodism, flowering signal transduction involved in conjugation with cellular fusion behavioral response to nutrient intermicrovillar adhesion cell motility uterine wall growth chromosome localization to nuclear envelope involved in homologous chromosome segregation prevention of polyspermy spermatid nucleus elongation positive regulation of transcription involved in egg activation detection of stimulus involved in meiotic spindle checkpoint
cartilage condensation pregnancy establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification
action less
action union
action find_tuple_counts
relation part of
type biological process
type mode of transport
action find_tuple_counts
relation part of
type biological process
type concept
action count
action filter_multi_types
action find
entity development involved in symbiotic interaction
relation part of
type mode of transport
type concept
[{'concept': 'biological process'}, 'part of', [{'concept': 'mode of transport'}, {'concept': 'concept'}]]
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ( COUNT ( ?z ) AS ?r ) WHERE { resource:development_involved_in_symbiotic_interaction property:part_of ?z . { ?z rdf:type ?u . VALUES ( ?u ) { ( ontology:mode_of_transport ) ( ontology:concept ) } } } } . FILTER ( ?m < ?r ) . { SELECT DISTINCT ?s ( COUNT ( ?q ) AS ?m ) WHERE { VALUES ( ?i ) { ( ontology:mode_of_transport ) ( ontology:concept ) } . ?q rdf:type ?i } GROUP BY ?s } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q23504701
P680
Q44424
USER
How many chemical bonds represents the molecular function of chaperone DnaJ    HMPREF0351_11650 ?
(Q23504701,P680,c(Q44424))
action count
action filter_type
action find
entity Q23504701
relation P680
type Q44424
['Q23504701', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?f ) WHERE { resource:Q23504701 property:P680 ?r . ?r rdf:type ontology:Q44424 }
chaperone DnaJ    HMPREF0351_11650
action count
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation molecular function
type chemical bond
['chaperone DnaJ    HMPREF0351_11650', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?f ) WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:molecular_function ?r . ?r rdf:type ontology:chemical_bond }
[]
chemical bond
SYSTEM
2
Q14633865 Q13667380
(Q23504701,P680,c(Q44424))
action count
action filter_type
action find
entity Q23504701
relation P680
type Q44424
[ANSWER]
['Q23504701', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?f ) WHERE { resource:Q23504701 property:P680 ?r . ?r rdf:type ontology:Q44424 }
zinc ion binding metal ion binding
2
action count
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation molecular function
type chemical bond
['chaperone DnaJ    HMPREF0351_11650', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?f ) WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:molecular_function ?r . ?r rdf:type ontology:chemical_bond }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q21992502
Q44424
USER
And also tell me about Teashirt homolog 1?
(Q21992502,P680,c(Q44424))
action count
action filter_type
action find
entity Q21992502
relation P680
type Q44424
['Q21992502', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?x ) WHERE { ?n rdf:type ontology:Q44424 . resource:Q21992502 property:P680 ?n }
Teashirt homolog 1
action count
action filter_type
action find
entity Teashirt homolog 1
relation molecular function
type chemical bond
['Teashirt homolog 1', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?x ) WHERE { ?n rdf:type ontology:chemical_bond . resource:Teashirt_homolog_1 property:molecular_function ?n }
[]
chemical bond
SYSTEM
1
(Q21992502,P680,c(Q44424))
action count
action filter_type
action find
entity Q21992502
relation P680
type Q44424
[ANSWER]
['Q21992502', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?x ) WHERE { ?n rdf:type ontology:Q44424 . resource:Q21992502 property:P680 ?n }
1
action count
action filter_type
action find
entity Teashirt homolog 1
relation molecular function
type chemical bond
['Teashirt homolog 1', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ( COUNT ( ?n ) AS ?x ) WHERE { ?n rdf:type ontology:chemical_bond . resource:Teashirt_homolog_1 property:molecular_function ?n }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23504701
P702
Q863908
USER
Which nucleic acid sequence encodes chaperone DnaJ    HMPREF0351_11650 ?
(Q23504701,P702,c(Q863908))
action filter_type
action find
entity Q23504701
relation P702
type Q863908
['Q23504701', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q863908 . resource:Q23504701 property:P702 ?t }
chaperone DnaJ    HMPREF0351_11650
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation encoded by
type nucleic acid sequence
['chaperone DnaJ    HMPREF0351_11650', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:nucleic_acid_sequence . resource:chaperone_DnaJ____HMPREF0351_11650 property:encoded_by ?t }
[]
nucleic acid sequence
Q23181706
SYSTEM
chaperone DnaJ    HMPREF0351_11650
Q23181706
(Q23504701,P702,c(Q863908))
action filter_type
action find
entity Q23504701
relation P702
type Q863908
Chaperone DnaJ HMPREF0351 11650 encodes chaperone DnaJ HMPREF0351_11650
['Q23504701', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q863908 . resource:Q23504701 property:P702 ?t }
chaperone DnaJ    HMPREF0351_11650
Chaperone DnaJ HMPREF0351 11650 encodes chaperone DnaJ HMPREF0351_11650
chaperone DnaJ    HMPREF0351_11650
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation encoded by
type nucleic acid sequence
['chaperone DnaJ    HMPREF0351_11650', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:nucleic_acid_sequence . resource:chaperone_DnaJ____HMPREF0351_11650 property:encoded_by ?t }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23504701
P681
Q15989253
USER
What is a component of that nutrient ?
(Q23181706,P681,c(Q15989253))
action filter_type
action find
entity Q23504701
relation P681
type Q15989253
['Q23181706', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?p WHERE { resource:Q23504701 property:P681 ?p . ?p rdf:type ontology:Q15989253 }
chaperone DnaJ    HMPREF0351_11650
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation cell component
type part
['chaperone DnaJ    HMPREF0351_11650', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?p WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:cell_component ?p . ?p rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23181706,P681,c(Q15989253))
action filter_type
action find
entity Q23504701
relation P681
type Q15989253
A component of that nutrient is the [ANSWER]
['Q23181706', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?p WHERE { resource:Q23504701 property:P681 ?p . ?p rdf:type ontology:Q15989253 }
cytoplasm
A component of that nutrient is the cytoplasm
cytoplasm
action filter_type
action find
entity chaperone DnaJ    HMPREF0351_11650
relation cell component
type part
['chaperone DnaJ    HMPREF0351_11650', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?p WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:cell_component ?p . ?p rdf:type ontology:part }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23504701
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q79899)
action filter_type
action find_reverse
entity Q23504701
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q79899']
SELECT DISTINCT ?r WHERE { ?r property:P688 resource:Q23504701 . ?r rdf:type ontology:Q863908 }
chaperone DnaJ    HMPREF0351_11650
action filter_type
action find_reverse
entity chaperone DnaJ    HMPREF0351_11650
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'cytoplasm']
SELECT DISTINCT ?r WHERE { ?r property:encodes resource:chaperone_DnaJ____HMPREF0351_11650 . ?r rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23181706
SYSTEM
chaperone DnaJ    HMPREF0351_11650
Q23181706
(c(Q863908),P688,Q79899)
action filter_type
action find_reverse
entity Q23504701
relation P688
type Q863908
Chaperone DnaJ HMPREF0351 11650 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q79899']
SELECT DISTINCT ?r WHERE { ?r property:P688 resource:Q23504701 . ?r rdf:type ontology:Q863908 }
chaperone DnaJ    HMPREF0351_11650
Chaperone DnaJ HMPREF0351 11650 encodes that nutrient
chaperone DnaJ    HMPREF0351_11650
action filter_type
action find_reverse
entity chaperone DnaJ    HMPREF0351_11650
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'cytoplasm']
SELECT DISTINCT ?r WHERE { ?r property:encodes resource:chaperone_DnaJ____HMPREF0351_11650 . ?r rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q23181706 Q23504701
P688
Q181394
USER
Is that nucleic acid sequence an encoding of chaperone DnaJ    HMPREF0351_11650 ?
(Q23181706,P688,Q23504701)
action is_in
entity Q23504701
action find
entity Q23181706
relation P688
['Q23181706', 'P688', 'Q23504701']
ASK WHERE { resource:Q23181706 property:P688 resource:Q23504701 }
chaperone DnaJ    HMPREF0351_11650 chaperone DnaJ    HMPREF0351_11650
action is_in
entity chaperone DnaJ    HMPREF0351_11650
action find
entity chaperone DnaJ    HMPREF0351_11650
relation encodes
['chaperone DnaJ    HMPREF0351_11650', 'encodes', 'chaperone DnaJ    HMPREF0351_11650']
ASK WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:encodes resource:chaperone_DnaJ____HMPREF0351_11650 }
[]
nutrient
SYSTEM
YES
(Q23181706,P688,Q23504701)
action is_in
entity Q23504701
action find
entity Q23181706
relation P688
[ANSWER]
['Q23181706', 'P688', 'Q23504701']
ASK WHERE { resource:Q23181706 property:P688 resource:Q23504701 }
Yes
action is_in
entity chaperone DnaJ    HMPREF0351_11650
action find
entity chaperone DnaJ    HMPREF0351_11650
relation encodes
['chaperone DnaJ    HMPREF0351_11650', 'encodes', 'chaperone DnaJ    HMPREF0351_11650']
ASK WHERE { resource:chaperone_DnaJ____HMPREF0351_11650 property:encodes resource:chaperone_DnaJ____HMPREF0351_11650 }
[]