Simple Question (Direct)
Simple Question
Q24131502
P680
Q44424
USER
What represents the molecular function of formate dehydrogenase alpha subunit    ECL_01902 ?
(Q24131502,P680,c(Q44424))
action filter_type
action find
entity Q24131502
relation P680
type Q44424
['Q24131502', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:Q44424 . resource:Q24131502 property:P680 ?s }
formate dehydrogenase alpha subunit    ECL_01902
action filter_type
action find
entity formate dehydrogenase alpha subunit    ECL_01902
relation molecular function
type chemical bond
['formate dehydrogenase alpha subunit    ECL_01902', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:chemical_bond . resource:formate_dehydrogenase_alpha_subunit____ECL_01902 property:molecular_function ?s }
[]
chemical bond
Q14916240 Q13667380
SYSTEM
molybdenum ion binding, metal ion binding
Q14916240 Q13667380
(Q24131502,P680,c(Q44424))
action filter_type
action find
entity Q24131502
relation P680
type Q44424
[ANSWERS] represent the molecular function of formate dehydrogenase alpha subunit ECL_01902
['Q24131502', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:Q44424 . resource:Q24131502 property:P680 ?s }
molybdenum ion binding metal ion binding
Molybdenum ion binding and metal ion binding represent the molecular function of formate dehydrogenase alpha subunit ECL_01902
molybdenum ion binding metal ion binding
action filter_type
action find
entity formate dehydrogenase alpha subunit    ECL_01902
relation molecular function
type chemical bond
['formate dehydrogenase alpha subunit    ECL_01902', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:chemical_bond . resource:formate_dehydrogenase_alpha_subunit____ECL_01902 property:molecular_function ?s }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24131502
P703
Q631147
USER
Which infraspecific name is formate dehydrogenase alpha subunit    ECL_01902 found in ?
(Q24131502,P703,c(Q631147))
action filter_type
action find
entity Q24131502
relation P703
type Q631147
['Q24131502', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?m WHERE { resource:Q24131502 property:P703 ?m . ?m rdf:type ontology:Q631147 }
formate dehydrogenase alpha subunit    ECL_01902
action filter_type
action find
entity formate dehydrogenase alpha subunit    ECL_01902
relation found in taxon
type infraspecific name
['formate dehydrogenase alpha subunit    ECL_01902', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?m WHERE { resource:formate_dehydrogenase_alpha_subunit____ECL_01902 property:found_in_taxon ?m . ?m rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102928
SYSTEM
Enterobacter cloacae subsp. cloacae ATCC 13047
Q21102928
(Q24131502,P703,c(Q631147))
action filter_type
action find
entity Q24131502
relation P703
type Q631147
Species [ANSWER] is formate dehydrogenase alpha subunit ECL_01902 found in
['Q24131502', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?m WHERE { resource:Q24131502 property:P703 ?m . ?m rdf:type ontology:Q631147 }
Enterobacter cloacae subsp. cloacae ATCC 13047
Species Enterobacter cloacae subsp. cloacae ATCC 13047 is formate dehydrogenase alpha subunit ECL_01902 found in
Enterobacter cloacae subsp. cloacae ATCC 13047
action filter_type
action find
entity formate dehydrogenase alpha subunit    ECL_01902
relation found in taxon
type infraspecific name
['formate dehydrogenase alpha subunit    ECL_01902', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?m WHERE { resource:formate_dehydrogenase_alpha_subunit____ECL_01902 property:found_in_taxon ?m . ?m rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24131502
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q21102928)
action filter_type
action find_reverse
entity Q24131502
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21102928']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q24131502 . ?t rdf:type ontology:Q863908 }
formate dehydrogenase alpha subunit    ECL_01902
action filter_type
action find_reverse
entity formate dehydrogenase alpha subunit    ECL_01902
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Enterobacter cloacae subsp. cloacae ATCC 13047']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:formate_dehydrogenase_alpha_subunit____ECL_01902 . ?t rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23079309
SYSTEM
formate dehydrogenase alpha subunit    ECL_01902
Q23079309
(c(Q863908),P688,Q21102928)
action filter_type
action find_reverse
entity Q24131502
relation P688
type Q863908
Formate dehydrogenase alpha subunit ECL 01902 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q21102928']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q24131502 . ?t rdf:type ontology:Q863908 }
formate dehydrogenase alpha subunit    ECL_01902
Formate dehydrogenase alpha subunit ECL 01902 encodes that nutrient
formate dehydrogenase alpha subunit    ECL_01902
action filter_type
action find_reverse
entity formate dehydrogenase alpha subunit    ECL_01902
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Enterobacter cloacae subsp. cloacae ATCC 13047']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:formate_dehydrogenase_alpha_subunit____ECL_01902 . ?t rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24131502
P682
Q1057
USER
What is the metabolic process that formate dehydrogenase alpha subunit    ECL_01902 is involved in ?
(Q24131502,P682,c(Q1057))
action filter_type
action find
entity Q24131502
relation P682
type Q1057
['Q24131502', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?e WHERE { resource:Q24131502 property:P682 ?e . ?e rdf:type ontology:Q1057 }
formate dehydrogenase alpha subunit    ECL_01902
action filter_type
action find
entity formate dehydrogenase alpha subunit    ECL_01902
relation biological process
type metabolic process
['formate dehydrogenase alpha subunit    ECL_01902', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?e WHERE { resource:formate_dehydrogenase_alpha_subunit____ECL_01902 property:biological_process ?e . ?e rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q24131502,P682,c(Q1057))
action filter_type
action find
entity Q24131502
relation P682
type Q1057
The metabolic process that formate dehydrogenase alpha subunit ECL _01902 is involved in is the [ANSWER]
['Q24131502', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?e WHERE { resource:Q24131502 property:P682 ?e . ?e rdf:type ontology:Q1057 }
oxidation-reduction process
The metabolic process that formate dehydrogenase alpha subunit ECL _01902 is involved in is the oxidation-reduction process
oxidation-reduction process
action filter_type
action find
entity formate dehydrogenase alpha subunit    ECL_01902
relation biological process
type metabolic process
['formate dehydrogenase alpha subunit    ECL_01902', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?e WHERE { resource:formate_dehydrogenase_alpha_subunit____ECL_01902 property:biological_process ?e . ?e rdf:type ontology:metabolic_process }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q24120321
Q1057
USER
And what about aldehyde dehydrogenase    BN117_1325?
(Q24120321,P682,c(Q1057))
action filter_type
action find
entity Q24120321
relation P682
type Q1057
['Q24120321', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?g WHERE { resource:Q24120321 property:P682 ?g . ?g rdf:type ontology:Q1057 }
aldehyde dehydrogenase    BN117_1325
action filter_type
action find
entity aldehyde dehydrogenase    BN117_1325
relation biological process
type metabolic process
['aldehyde dehydrogenase    BN117_1325', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?g WHERE { resource:aldehyde_dehydrogenase____BN117_1325 property:biological_process ?g . ?g rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q24120321,P682,c(Q1057))
action filter_type
action find
entity Q24120321
relation P682
type Q1057
[ANSWER]
['Q24120321', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?g WHERE { resource:Q24120321 property:P682 ?g . ?g rdf:type ontology:Q1057 }
oxidation-reduction process
oxidation-reduction process
action filter_type
action find
entity aldehyde dehydrogenase    BN117_1325
relation biological process
type metabolic process
['aldehyde dehydrogenase    BN117_1325', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?g WHERE { resource:aldehyde_dehydrogenase____BN117_1325 property:biological_process ?g . ?g rdf:type ontology:metabolic_process }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q79529
USER
How many nutrients do atleast 7 nutrients and chemical substances contact with ?
(c(Q181394)|c(Q79529),P129,c(Q181394))
action count
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
value 7
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?e ) WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?w ) ?s WHERE { VALUES ( ?r ) { ( ontology:Q181394 ) ( ontology:Q79529 ) } . ?m rdf:type ?r } GROUP BY ?s } . FILTER ( ?w >= 7 ) }
action count
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 7
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?e ) WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?w ) ?s WHERE { VALUES ( ?r ) { ( ontology:nutrient ) ( ontology:chemical_substance ) } . ?m rdf:type ?r } GROUP BY ?s } . FILTER ( ?w >= 7 ) }
[]
nutrient nutrient chemical substance
SYSTEM
64
Q21110942 Q21116154 Q309513 Q308856 Q4847910 Q413209 Q21154358 Q5123372 Q288797 Q1486720 Q21109365 Q15323278 Q4847900 Q4847907 Q4639596 Q5512777 Q21116162 Q21116164 Q2844056 Q5773155 Q21115334 Q288382 Q4859538 Q21115051 Q21115052 Q21109355 Q21110872 Q21114578 Q21108118 Q4734891 Q21114576 Q21131500 Q21132652 Q7673856 Q21115961 Q21115962 Q21115965 Q8083989 Q311568 Q3062781 Q12746120 Q5629167 Q21115815 Q21115816 Q21115819 Q288395 Q21115046 Q21115043 Q7834290 Q21114585 Q21114582 Q21497939 Q21497937 Q21130911 Q21150595 Q15324694 Q21201294 Q1949517 Q21109363 Q21109359 Q21983336 Q15324415 Q5520260 Q2034004
(c(Q181394)|c(Q79529),P129,c(Q181394))
action count
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
value 7
[ANSWER]
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?e ) WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?w ) ?s WHERE { VALUES ( ?r ) { ( ontology:Q181394 ) ( ontology:Q79529 ) } . ?m rdf:type ?r } GROUP BY ?s } . FILTER ( ?w >= 7 ) }
G-protein coupled receptor 55 Adenosine receptor A3 Histamine H1 receptor D(4) dopamine receptor Muscarinic acetylcholine receptor M2 Transient receptor potential cation channel subfamily V member 1 Histone deacetylase 3 Mu-type opioid receptor 5-hydroxytryptamine receptor 1B Glutamate receptor 3 5-hydroxytryptamine receptor 4 Transient receptor potential cation channel subfamily A member 1 Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 5-hydroxytryptamine receptor 2B Gamma-aminobutyric acid receptor subunit alpha-4 Adenosine receptor A2a Adenosine receptor A2b Muscarinic acetylcholine receptor M3 Histone deacetylase 2 Delta-type opioid receptor Histamine H4 receptor Metabotropic glutamate receptor 2 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 1F 5-hydroxytryptamine receptor 7 D(3) dopamine receptor Gamma-aminobutyric acid receptor subunit alpha-3 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-5 D(1B) dopamine receptor Glucose-dependent insulinotropic receptor Substance-P receptor Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Kappa-type opioid receptor Histamine H2 receptor Adenosine receptor A1 Muscarinic acetylcholine receptor M5 Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Histamine H3 receptor 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-6 Gamma-aminobutyric acid receptor subunit alpha-2 5-hydroxytryptamine receptor 7 5-hydroxytryptamine receptor 5A Glutamate receptor ionotropic, NMDA 2D Cannabinoid receptor 2 Transient receptor potential cation channel subfamily V member 3 Cannabinoid receptor 1 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 6 5-hydroxytryptamine receptor 5A Histamine H3 receptor Transient receptor potential cation channel subfamily M member 8 Gamma-aminobutyric acid receptor subunit alpha-1 D(2) dopamine receptor
64
action count
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 7
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?e ) WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?w ) ?s WHERE { VALUES ( ?r ) { ( ontology:nutrient ) ( ontology:chemical_substance ) } . ?m rdf:type ?r } GROUP BY ?s } . FILTER ( ?w >= 7 ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q22259043 Q24131502
P702
Q863908
USER
Which nucleic acid sequences are the gene that encodes formate dehydrogenase alpha subunit    ECL_01902 or aggregation promoting protein    LBA1850 ?
OR((Q24131502,P702,c(Q863908)), (Q22259043,P702,c(Q863908)))
action filter_type
action union
action find
entity Q24131502
relation P702
action find
entity Q22259043
relation P702
type Q863908
{'OR': [['Q24131502', 'P702', {'concept': 'Q863908'}], ['Q22259043', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?b WHERE { { VALUES ( ?w ) { ( resource:Q22259043 ) ( resource:Q24131502 ) } . ?w property:P702 ?b } . ?b rdf:type ontology:Q863908 }
aggregation promoting protein    LBA1850 formate dehydrogenase alpha subunit    ECL_01902
action filter_type
action union
action find
entity formate dehydrogenase alpha subunit    ECL_01902
relation encoded by
action find
entity aggregation promoting protein    LBA1850
relation encoded by
type nucleic acid sequence
{'OR': [['formate dehydrogenase alpha subunit    ECL_01902', 'encoded by', {'concept': 'nucleic acid sequence'}], ['aggregation promoting protein    LBA1850', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?b WHERE { { VALUES ( ?w ) { ( resource:aggregation_promoting_protein____LBA1850 ) ( resource:formate_dehydrogenase_alpha_subunit____ECL_01902 ) } . ?w property:encoded_by ?b } . ?b rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q22239953 Q23079309
SYSTEM
aggregation promoting protein    LBA1850, formate dehydrogenase alpha subunit    ECL_01902
Q22239953 Q23079309
OR((Q24131502,P702,c(Q863908)), (Q22259043,P702,c(Q863908)))
action filter_type
action union
action find
entity Q24131502
relation P702
action find
entity Q22259043
relation P702
type Q863908
[ANSWERS]
{'OR': [['Q24131502', 'P702', {'concept': 'Q863908'}], ['Q22259043', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?b WHERE { { VALUES ( ?w ) { ( resource:Q22259043 ) ( resource:Q24131502 ) } . ?w property:P702 ?b } . ?b rdf:type ontology:Q863908 }
aggregation promoting protein    LBA1850 formate dehydrogenase alpha subunit    ECL_01902
Aggregation promoting protein LBA1850 and formate dehydrogenase alpha subunit ECL 01902 are the gene that encodes formate dehydrogenase alpha subunit ECL_01902 or aggregation promoting protein LBA1850
aggregation promoting protein    LBA1850 formate dehydrogenase alpha subunit    ECL_01902
action filter_type
action union
action find
entity formate dehydrogenase alpha subunit    ECL_01902
relation encoded by
action find
entity aggregation promoting protein    LBA1850
relation encoded by
type nucleic acid sequence
{'OR': [['formate dehydrogenase alpha subunit    ECL_01902', 'encoded by', {'concept': 'nucleic acid sequence'}], ['aggregation promoting protein    LBA1850', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?b WHERE { { VALUES ( ?w ) { ( resource:aggregation_promoting_protein____LBA1850 ) ( resource:formate_dehydrogenase_alpha_subunit____ECL_01902 ) } . ?w property:encoded_by ?b } . ?b rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P129
Q181394 Q8386 Q79529
USER
Which nutrients do max number of drugs or chemical substances interact with ?
(c(Q8386)|c(Q79529),P129,c(Q181394))
action argmax
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
[[{'concept': 'Q8386'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( MAX ( ?y ) AS ?u ) { SELECT DISTINCT ?z ( COUNT ( ?p ) AS ?y ) WHERE { { ?p property:P129 ?z . ?z rdf:type ontology:Q181394 . ?p rdf:type ontology:Q79529 } UNION { ?p property:P129 ?z . ?z rdf:type ontology:Q181394 . ?p rdf:type ontology:Q8386 } } GROUP BY ?z } } . { SELECT DISTINCT ?f ( COUNT ( ?b ) AS ?l ) WHERE { { ?f rdf:type ontology:Q181394 . ?b rdf:type ontology:Q8386 . ?b property:P129 ?f } UNION { ?b property:P129 ?f . ?f rdf:type ontology:Q181394 . ?b rdf:type ontology:Q79529 } } GROUP BY ?f } . FILTER ( ?l = ?u ) }
action argmax
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
[[{'concept': 'drug'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( MAX ( ?y ) AS ?u ) { SELECT DISTINCT ?z ( COUNT ( ?p ) AS ?y ) WHERE { { ?p property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient . ?p rdf:type ontology:chemical_substance } UNION { ?p property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient . ?p rdf:type ontology:drug } } GROUP BY ?z } } . { SELECT DISTINCT ?f ( COUNT ( ?b ) AS ?l ) WHERE { { ?f rdf:type ontology:nutrient . ?b rdf:type ontology:drug . ?b property:physically_interacts_with ?f } UNION { ?b property:physically_interacts_with ?f . ?f rdf:type ontology:nutrient . ?b rdf:type ontology:chemical_substance } } GROUP BY ?f } . FILTER ( ?l = ?u ) }
[]
nutrient drug chemical substance
Q1949517
SYSTEM
5-hydroxytryptamine receptor 2A
Q1949517
(c(Q8386)|c(Q79529),P129,c(Q181394))
action argmax
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
Max number of drugs or chemical substances interact with [ANSWER]
[[{'concept': 'Q8386'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( MAX ( ?y ) AS ?u ) { SELECT DISTINCT ?z ( COUNT ( ?p ) AS ?y ) WHERE { { ?p property:P129 ?z . ?z rdf:type ontology:Q181394 . ?p rdf:type ontology:Q79529 } UNION { ?p property:P129 ?z . ?z rdf:type ontology:Q181394 . ?p rdf:type ontology:Q8386 } } GROUP BY ?z } } . { SELECT DISTINCT ?f ( COUNT ( ?b ) AS ?l ) WHERE { { ?f rdf:type ontology:Q181394 . ?b rdf:type ontology:Q8386 . ?b property:P129 ?f } UNION { ?b property:P129 ?f . ?f rdf:type ontology:Q181394 . ?b rdf:type ontology:Q79529 } } GROUP BY ?f } . FILTER ( ?l = ?u ) }
5-hydroxytryptamine receptor 2A
Max number of drugs or chemical substances interact with 5-hydroxytryptamine receptor 2A
5-hydroxytryptamine receptor 2A
action argmax
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
[[{'concept': 'drug'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( MAX ( ?y ) AS ?u ) { SELECT DISTINCT ?z ( COUNT ( ?p ) AS ?y ) WHERE { { ?p property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient . ?p rdf:type ontology:chemical_substance } UNION { ?p property:physically_interacts_with ?z . ?z rdf:type ontology:nutrient . ?p rdf:type ontology:drug } } GROUP BY ?z } } . { SELECT DISTINCT ?f ( COUNT ( ?b ) AS ?l ) WHERE { { ?f rdf:type ontology:nutrient . ?b rdf:type ontology:drug . ?b property:physically_interacts_with ?f } UNION { ?b property:physically_interacts_with ?f . ?f rdf:type ontology:nutrient . ?b rdf:type ontology:chemical_substance } } GROUP BY ?f } . FILTER ( ?l = ?u ) }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q1057 Q14916240
P682 P680
Q181394
USER
Which nutrients are the gene that have molybdenum ion binding as the molecular function and are involved in metabolic process ?
AND((c(Q181394),P680,Q14916240), (c(Q181394),P682,Q1057))
action filter_type
action intersection
action find_reverse
entity Q14916240
relation P680
action find_reverse
entity Q1057
relation P682
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P680', 'Q14916240'], [{'concept': 'Q181394'}, 'P682', 'Q1057']]}
SELECT DISTINCT ?u WHERE { ?u property:P682 resource:Q1057 . ?u property:P680 resource:Q14916240 . ?u rdf:type ontology:Q181394 }
metabolic process molybdenum ion binding
action filter_type
action intersection
action find_reverse
entity molybdenum ion binding
relation molecular function
action find_reverse
entity metabolic process
relation biological process
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'molecular function', 'molybdenum ion binding'], [{'concept': 'nutrient'}, 'biological process', 'metabolic process']]}
SELECT DISTINCT ?u WHERE { ?u property:biological_process resource:metabolic_process . ?u property:molecular_function resource:molybdenum_ion_binding . ?u rdf:type ontology:nutrient }
[]
nutrient
Q23510878 Q23556117 Q23528726 Q23438614 Q23534233 Q23525497 Q23538159 Q22300811 Q23442332 Q23479862
SYSTEM
Some of them are hypothetical protein    BC4426, hypothetical protein    BPSS0707, MOSC domain-containing protein    CLC_1883, 2Fe-2S cluster-containing protein    VF_A0264, molybdenum cofactor sulfurase    CD630_17150, hypothetical protein    CA_C1991, hypothetical protein    Moth_2133, MOSC-domain-containing protein    Cj0602c, hypothetical protein    VPA1698, hypothetical protein    SAOUHSC_02613
Q23568029 Q23427751 Q23538159 Q23556117 Q23438614 Q23519227 Q23484361 Q23471704 Q23464947 Q23442332 Q23534233 Q23571467 Q23484524 Q21978273 Q23525497 Q23479862 Q23510878 Q23514691 Q23501257 Q21145405 Q23528726 Q23515433 Q22300811 Q23481837 Q23544036 Q23513067 Q23608409
AND((c(Q181394),P680,Q14916240), (c(Q181394),P682,Q1057))
action filter_type
action intersection
action find_reverse
entity Q14916240
relation P680
action find_reverse
entity Q1057
relation P682
type Q181394
[ANSWERS]
{'AND': [[{'concept': 'Q181394'}, 'P680', 'Q14916240'], [{'concept': 'Q181394'}, 'P682', 'Q1057']]}
SELECT DISTINCT ?u WHERE { ?u property:P682 resource:Q1057 . ?u property:P680 resource:Q14916240 . ?u rdf:type ontology:Q181394 }
hypothetical protein    gll3081 molybdate transporter ATP-binding protein    YPO1147 hypothetical protein    Moth_2133 hypothetical protein    BPSS0707 2Fe-2S cluster-containing protein    VF_A0264 MOSC domain-containing protein    BT9727_4167 hypothetical protein    DR_1051 hypothetical protein    CT1334 putative Fe-S protein    RSP_1065 hypothetical protein    VPA1698 molybdenum cofactor sulfurase    CD630_17150 hypothetical protein    glr3046 hypothetical protein    DR_1883 hypothetical protein    TTHA1327 hypothetical protein    CA_C1991 hypothetical protein    SAOUHSC_02613 hypothetical protein    BC4426 hypothetical protein    BSU07650 hypothetical protein    EF1394 Mitochondrial amidoxime-reducing component 1 MOSC domain-containing protein    CLC_1883 metal-sulfur cluster biosynthesis proteins YuaD    BSU31040 MOSC-domain-containing protein    Cj0602c hypothetical protein    SE1912 MOSC domain-containing protein    BMAA1125 hypothetical protein    BC2368 MOSC domain-containing protein    Smed_0697
MOSC-domain-containing protein Cj0602c, hypothetical protein VPA1698 and hypothetical protein SAOUHSC 02613 are the gene that have molybdenum ion binding as the molecular function and are involved in metabolic process
hypothetical protein    BC4426 hypothetical protein    BPSS0707 MOSC domain-containing protein    CLC_1883 2Fe-2S cluster-containing protein    VF_A0264 molybdenum cofactor sulfurase    CD630_17150 hypothetical protein    CA_C1991 hypothetical protein    Moth_2133 MOSC-domain-containing protein    Cj0602c hypothetical protein    VPA1698 hypothetical protein    SAOUHSC_02613
action filter_type
action intersection
action find_reverse
entity molybdenum ion binding
relation molecular function
action find_reverse
entity metabolic process
relation biological process
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'molecular function', 'molybdenum ion binding'], [{'concept': 'nutrient'}, 'biological process', 'metabolic process']]}
SELECT DISTINCT ?u WHERE { ?u property:biological_process resource:metabolic_process . ?u property:molecular_function resource:molybdenum_ion_binding . ?u rdf:type ontology:nutrient }
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Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q79529
USER
Which nutrients do exactly 4 nutrients and chemical substances communicate with ?
(c(Q181394)|c(Q79529),P129,c(Q181394))
action equal
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
value 4
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ?h ( COUNT ( ?d ) AS ?r ) WHERE { { ?d property:P129 ?h . ?h rdf:type ontology:Q181394 . ?d rdf:type ontology:Q79529 } UNION { ?d property:P129 ?h . ?h rdf:type ontology:Q181394 . ?d rdf:type ontology:Q181394 } } GROUP BY ?h } . FILTER ( ?r = 4 ) }
action equal
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 4
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ?h ( COUNT ( ?d ) AS ?r ) WHERE { { ?d property:physically_interacts_with ?h . ?h rdf:type ontology:nutrient . ?d rdf:type ontology:chemical_substance } UNION { ?d property:physically_interacts_with ?h . ?h rdf:type ontology:nutrient . ?d rdf:type ontology:nutrient } } GROUP BY ?h } . FILTER ( ?r = 4 ) }
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nutrient nutrient chemical substance
Q424401 Q21173381 Q21118862
SYSTEM
Epidermal growth factor receptor, Histone deacetylase 6, Glutamate receptor ionotropic, NMDA 1
Q14872770 Q21173427 Q21108695 Q4789584 Q4789587 Q287958 Q5500227 Q7671479 Q21103155 Q21122995 Q4734887 Q21988386 Q21173381 Q21126779 Q21126777 Q5500222 Q4822491 Q3454525 Q21118072 Q21132004 Q6590408 Q7671468 Q21118862 Q5773160 Q6590443 Q21122997 Q21108125 Q415271 Q21122433 Q424401 Q21119822 Q21173206
(c(Q181394)|c(Q79529),P129,c(Q181394))
action equal
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
value 4
[ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ?h ( COUNT ( ?d ) AS ?r ) WHERE { { ?d property:P129 ?h . ?h rdf:type ontology:Q181394 . ?d rdf:type ontology:Q79529 } UNION { ?d property:P129 ?h . ?h rdf:type ontology:Q181394 . ?d rdf:type ontology:Q181394 } } GROUP BY ?h } . FILTER ( ?r = 4 ) }
Histamine H4 receptor Histone deacetylase 9 G-protein coupled receptor 84 Vasopressin V1a receptor Vasopressin V1b receptor Beta-1 adrenergic receptor Free fatty acid receptor 3 Transient receptor potential cation channel subfamily M member 3 Glycine receptor subunit alpha-1 Melatonin receptor type 1A Alpha-1D adrenergic receptor Delta-type opioid receptor Histone deacetylase 6 P2Y purinoceptor 4 P2Y purinoceptor 2 Free fatty acid receptor 1 Aurora kinase B Progesterone receptor Steroid hormone receptor ERR1 Endothelin-1 receptor Metabotropic glutamate receptor 8 Short transient receptor potential channel 5 Glutamate receptor ionotropic, NMDA 1 Histone deacetylase 5 Oxytocin receptor Melatonin receptor type 1B 5-hydroxytryptamine receptor 3A Receptor tyrosine-protein kinase erbB-2 Orexin receptor type 1 Epidermal growth factor receptor Inward rectifier potassium channel 4 Histone deacetylase 4
Epidermal growth factor receptor, Histone deacetylase 6 and Glutamate receptor ionotropic, NMDA 1 exactly 4 nutrients and chemical substances communicate with
Epidermal growth factor receptor Histone deacetylase 6 Glutamate receptor ionotropic, NMDA 1
action equal
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 4
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ?h ( COUNT ( ?d ) AS ?r ) WHERE { { ?d property:physically_interacts_with ?h . ?h rdf:type ontology:nutrient . ?d rdf:type ontology:chemical_substance } UNION { ?d property:physically_interacts_with ?h . ?h rdf:type ontology:nutrient . ?d rdf:type ontology:nutrient } } GROUP BY ?h } . FILTER ( ?r = 4 ) }
[]