Simple Question (Direct)
Simple Question
Q22677260
P680
Q44424
USER
What represents the molecular function of Inositol-tetrakisphosphate 1-kinase ?
(Q22677260,P680,c(Q44424))
action filter_type
action find
entity Q22677260
relation P680
type Q44424
['Q22677260', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q44424 . resource:Q22677260 property:P680 ?q }
Inositol-tetrakisphosphate 1-kinase
action filter_type
action find
entity Inositol-tetrakisphosphate 1-kinase
relation molecular function
type chemical bond
['Inositol-tetrakisphosphate 1-kinase', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:chemical_bond . resource:Inositol-tetrakisphosphate_1-kinase property:molecular_function ?q }
[]
chemical bond
Q14860850 Q13667380
SYSTEM
magnesium ion binding, metal ion binding
Q14860850 Q13667380
(Q22677260,P680,c(Q44424))
action filter_type
action find
entity Q22677260
relation P680
type Q44424
[ANSWERS] represent the molecular function of Inositol-tetrakisphosphate 1-kinase
['Q22677260', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q44424 . resource:Q22677260 property:P680 ?q }
magnesium ion binding metal ion binding
Magnesium ion binding and metal ion binding represent the molecular function of Inositol-tetrakisphosphate 1-kinase
magnesium ion binding metal ion binding
action filter_type
action find
entity Inositol-tetrakisphosphate 1-kinase
relation molecular function
type chemical bond
['Inositol-tetrakisphosphate 1-kinase', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:chemical_bond . resource:Inositol-tetrakisphosphate_1-kinase property:molecular_function ?q }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q22677260
P681
Q5058355
USER
What is a component of that nutrient ?
(Q14860850,P681,c(Q5058355)) (Q13667380,P681,c(Q5058355))
action filter_type
action find
entity Q22677260
relation P681
type Q5058355
['Q14860850', 'P681', {'concept': 'Q5058355'}] ['Q13667380', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?v WHERE { resource:Q22677260 property:P681 ?v . ?v rdf:type ontology:Q5058355 }
Inositol-tetrakisphosphate 1-kinase
action filter_type
action find
entity Inositol-tetrakisphosphate 1-kinase
relation cell component
type cellular component
['magnesium ion binding', 'cell component', {'concept': 'cellular component'}] ['metal ion binding', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?v WHERE { resource:Inositol-tetrakisphosphate_1-kinase property:cell_component ?v . ?v rdf:type ontology:cellular_component }
[]
cellular component
Q3824358
SYSTEM
intracellular
Q3824358
(Q14860850,P681,c(Q5058355)) (Q13667380,P681,c(Q5058355))
action filter_type
action find
entity Q22677260
relation P681
type Q5058355
A component of that nutrient is an [ANSWER]
['Q14860850', 'P681', {'concept': 'Q5058355'}] ['Q13667380', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?v WHERE { resource:Q22677260 property:P681 ?v . ?v rdf:type ontology:Q5058355 }
intracellular
A component of that nutrient is an intracellular
intracellular
action filter_type
action find
entity Inositol-tetrakisphosphate 1-kinase
relation cell component
type cellular component
['magnesium ion binding', 'cell component', {'concept': 'cellular component'}] ['metal ion binding', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?v WHERE { resource:Inositol-tetrakisphosphate_1-kinase property:cell_component ?v . ?v rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22677260
P702
Q863908
USER
What encodes Inositol-tetrakisphosphate 1-kinase ?
(Q22677260,P702,c(Q863908))
action filter_type
action find
entity Q22677260
relation P702
type Q863908
['Q22677260', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q863908 . resource:Q22677260 property:P702 ?w }
Inositol-tetrakisphosphate 1-kinase
action filter_type
action find
entity Inositol-tetrakisphosphate 1-kinase
relation encoded by
type nucleic acid sequence
['Inositol-tetrakisphosphate 1-kinase', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:nucleic_acid_sequence . resource:Inositol-tetrakisphosphate_1-kinase property:encoded_by ?w }
[]
nucleic acid sequence
Q18028067
SYSTEM
ITPK1
Q18028067
(Q22677260,P702,c(Q863908))
action filter_type
action find
entity Q22677260
relation P702
type Q863908
[ANSWER] encodes Inositol-tetrakisphosphate 1-kinase
['Q22677260', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q863908 . resource:Q22677260 property:P702 ?w }
ITPK1
ITPK1 encodes Inositol-tetrakisphosphate 1-kinase
ITPK1
action filter_type
action find
entity Inositol-tetrakisphosphate 1-kinase
relation encoded by
type nucleic acid sequence
['Inositol-tetrakisphosphate 1-kinase', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:nucleic_acid_sequence . resource:Inositol-tetrakisphosphate_1-kinase property:encoded_by ?w }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23427926
Q863908
USER
And how about hypothetical protein    YPO4098?
(Q23427926,P702,c(Q863908))
action filter_type
action find
entity Q23427926
relation P702
type Q863908
['Q23427926', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { resource:Q23427926 property:P702 ?g . ?g rdf:type ontology:Q863908 }
hypothetical protein    YPO4098
action filter_type
action find
entity hypothetical protein    YPO4098
relation encoded by
type nucleic acid sequence
['hypothetical protein    YPO4098', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { resource:hypothetical_protein____YPO4098 property:encoded_by ?g . ?g rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q22572918
SYSTEM
hypothetical protein    YPO4098
Q22572918
(Q23427926,P702,c(Q863908))
action filter_type
action find
entity Q23427926
relation P702
type Q863908
[ANSWER]
['Q23427926', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { resource:Q23427926 property:P702 ?g . ?g rdf:type ontology:Q863908 }
hypothetical protein    YPO4098
hypothetical protein    YPO4098
action filter_type
action find
entity hypothetical protein    YPO4098
relation encoded by
type nucleic acid sequence
['hypothetical protein    YPO4098', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { resource:hypothetical_protein____YPO4098 property:encoded_by ?g . ?g rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P129
Q181394 Q181394 Q8386
USER
Which nutrients do min number of nutrients and drugs interact with ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action argmin
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?v WHERE { { SELECT DISTINCT ( MIN ( ?q ) AS ?z ) { SELECT DISTINCT ?x ( COUNT ( ?t ) AS ?q ) WHERE { ?t rdf:type ?b . VALUES ( ?b ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } GROUP BY ?x } } . { SELECT DISTINCT ?v ( COUNT ( ?a ) AS ?c ) WHERE { VALUES ( ?o ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } . ?a rdf:type ?o } GROUP BY ?v } . FILTER ( ?c = ?z ) }
action argmin
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?v WHERE { { SELECT DISTINCT ( MIN ( ?q ) AS ?z ) { SELECT DISTINCT ?x ( COUNT ( ?t ) AS ?q ) WHERE { ?t rdf:type ?b . VALUES ( ?b ) { ( ontology:nutrient ) ( ontology:drug ) } } GROUP BY ?x } } . { SELECT DISTINCT ?v ( COUNT ( ?a ) AS ?c ) WHERE { VALUES ( ?o ) { ( ontology:nutrient ) ( ontology:drug ) } . ?a rdf:type ?o } GROUP BY ?v } . FILTER ( ?c = ?z ) }
[]
nutrient nutrient drug
Q425201 Q21113719 Q5514576
SYSTEM
Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1, Glycogen synthase kinase-3 beta
Q21135479 Q21120657 Q21987720 Q5635781 Q21494718 Q21115219 Q21119830 Q4217286 Q21108693 Q12746346 Q21108695 Q21123087 Q21988043 Q21985448 Q21172741 Q21111688 Q1407929 Q21173169 Q21107052 Q21108135 Q21113310 Q21113312 Q21113313 Q21113314 Q21113317 Q21113170 Q21113172 Q21113176 Q21126314 Q4042017 Q21496155 Q6590338 Q7073181 Q21107107 Q7317662 Q22675842 Q14911986 Q21100441 Q21113552 Q21114547 Q14865158 Q21110488 Q906403 Q21990430 Q21981115 Q420604 Q21135449 Q21108357 Q21126214 Q21156663 Q5500227 Q21118967 Q6589868 Q21108408 Q21118678 Q21984552 Q21123083 Q7923221 Q21106653 Q21118293 Q21130016 Q21111689 Q908221 Q21496578 Q5323823 Q22677568 Q21496575 Q21496576 Q21109253 Q21100773 Q21100774 Q21988044 Q21107535 Q21114341 Q21988816 Q21113326 Q21984063 Q21122125 Q4812911 Q21103089 Q21112081 Q4459747 Q511968 Q21130042 Q21123723 Q5198256 Q21107884 Q15324125 Q7275807 Q2640417 Q21125231 Q21100472 Q21123725 Q21155668 Q1147372 Q5514576 Q21119824 Q21980258 Q21119826 Q2385013 Q5419640 Q21494502 Q21114166 Q7671499 Q21104645 Q408853 Q21130460 Q21097266 Q5512777 Q21118785 Q21154430 Q21173746 Q21496383 Q21113719 Q21139471 Q21113101 Q21113100 Q424031 Q21110304 Q21114338 Q21132140 Q21126773 Q21105660 Q21991514 Q21991512 Q21113155 Q21981993 Q21171763 Q4650061 Q21112691 Q21499097 Q21114807 Q21208052 Q21987569 Q21173156 Q21121807 Q21124061 Q4822491 Q21126205 Q21108578 Q21113173 Q21120142 Q411978 Q21106540 Q21111184 Q4859538 Q21139123 Q21114291 Q14891582 Q21496918 Q21106795 Q21113926 Q21114574 Q21112525 Q21118072 Q7251483 Q21113330 Q5419638 Q21113337 Q21104817 Q14914570 Q21113158 Q21135903 Q21107088 Q21113152 Q21145932 Q21173215 Q21123245 Q5014947 Q21123246 Q5512833 Q5500223 Q21132248 Q21100464 Q15323346 Q21988035 Q21105636 Q21126242 Q5572421 Q21107443 Q21497124 Q21123241 Q6590408 Q21497128 Q21132652 Q6594119 Q21119694 Q21111879 Q21988026 Q21988024 Q7671460 Q7671461 Q21173504 Q7671469 Q12746382 Q21497155 Q7671464 Q21121466 Q21110933 Q6714411 Q7118491 Q13566123 Q21990458 Q21120698 Q21113274 Q7120326 Q21113278 Q21113115 Q6881891 Q7202245 Q2083074 Q21124401 Q4897285 Q21111495 Q21123752 Q21172884 Q21172886 Q21122109 Q6534535 Q21121716 Q21130508 Q21123216 Q22679008 Q21113831 Q4377404 Q4822488 Q21116933 Q5014193 Q21114819 Q288395 Q21120144 Q6714959 Q21119816 Q10988613 Q21123722 Q5014192 Q21108517 Q21154413 Q5611755 Q21111517 Q21988152 Q21982871 Q21113305 Q21119825 Q21113169 Q21113168 Q21113161 Q21172271 Q7455513 Q21119591 Q21114857 Q21100450 Q21100324 Q21132247 Q21106448 Q21987287 Q21118676 Q21118677 Q21108701 Q425201 Q9020944 Q21121379 Q21112289 Q21157860 Q7671478 Q21113099 Q21126947 Q21113295 Q21113297 Q21113292 Q21107799 Q21113349 Q21494464 Q21983336 Q288431 Q21107871 Q6589190 Q21097216 Q21122509 Q21114955 Q5201183 Q415762 Q6714402 Q21135787 Q571999 Q21495791 Q21100886 Q21115429 Q22683566 Q7002508 Q21121490 Q2356259 Q414401 Q21113127 Q21986206
(c(Q181394)|c(Q8386),P129,c(Q181394))
action argmin
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
Min number of nutrients and drugs interact with [ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?v WHERE { { SELECT DISTINCT ( MIN ( ?q ) AS ?z ) { SELECT DISTINCT ?x ( COUNT ( ?t ) AS ?q ) WHERE { ?t rdf:type ?b . VALUES ( ?b ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } GROUP BY ?x } } . { SELECT DISTINCT ?v ( COUNT ( ?a ) AS ?c ) WHERE { VALUES ( ?o ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } . ?a rdf:type ?o } GROUP BY ?v } . FILTER ( ?c = ?z ) }
Sodium channel protein type 8 subunit alpha Interleukin-23 subunit alpha Mas-related G-protein coupled receptor member D GTPase HRas Lysophosphatidic acid receptor 2 Oxysterols receptor LXR-beta Potassium channel subfamily K member 18 Cathepsin S G-protein coupled receptor 87 Nociceptin receptor G-protein coupled receptor 84 Neuromedin-K receptor Sphingosine 1-phosphate receptor 4 Hydroxycarboxylic acid receptor 1 G-protein coupled receptor 3 B2 bradykinin receptor Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Gap junction alpha-4 protein Neuronal acetylcholine receptor subunit alpha-10 Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit beta-3 Gamma-aminobutyric acid receptor subunit rho-2 Gamma-aminobutyric acid receptor subunit beta-2 Gamma-aminobutyric acid receptor subunit epsilon Gap junction delta-3 protein Gap junction delta-4 protein Gap junction delta-2 protein Sodium channel protein type 1 subunit alpha GTPase KRas Bromodomain testis-specific protein Metabotropic glutamate receptor 7 2-oxoglutarate receptor 1 Gap junction alpha-3 protein Nuclear receptor subfamily 1 group D member 2 Rhodopsin kinase Nociceptin receptor Bromodomain-containing protein 4 ATP-sensitive inward rectifier potassium channel 14 Nitric oxide synthase, inducible Potassium voltage-gated channel subfamily KQT member 1 Serine/threonine-protein kinase BRSK2 Protein kinase C zeta type P2Y purinoceptor 14 G-protein coupled receptor 6 Phenylalanine-4-hydroxylase Sodium channel protein type 3 subunit alpha Cystine/glutamate transporter Sphingosine 1-phosphate receptor 1 Mitogen-activated protein kinase 11 Free fatty acid receptor 3 G-protein coupled receptor 183 Metabotropic glutamate receptor 6 H(+)/Cl(-) exchange transporter 3 Melanocortin receptor 3 Potassium voltage-gated channel subfamily A member 3 Substance-K receptor Vesicular acetylcholine transporter Solute carrier family 23 member 1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic Serine/threonine-protein kinase PAK 2 B1 bradykinin receptor Indoleamine 2,3-dioxygenase 1 Lysophosphatidic acid receptor 3 Histone acetyltransferase p300 Corticotropin-releasing factor receptor 1 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Protein kinase C iota type Chloride transport protein 6 H(+)/Cl(-) exchange transporter 7 Sphingosine 1-phosphate receptor 3 Dual specificity mitogen-activated protein kinase kinase 6 Excitatory amino acid transporter 3 Neuropeptide S receptor Gamma-aminobutyric acid receptor subunit gamma-1 G-protein coupled receptor family C group 6 member A Serine palmitoyltransferase 3 Serine/threonine-protein kinase ATR Homeodomain-interacting protein kinase 1 Gap junction gamma-3 protein Toll-like receptor 8 Cyclin-dependent kinase 2 Carbonyl reductase [NADPH] 1 Pannexin-2 Cyclin-dependent kinase 9 Potassium voltage-gated channel subfamily B member 1 Transient receptor potential cation channel subfamily V member 4 Nuclear receptor ROR-alpha Aldehyde dehydrogenase, mitochondrial Solute carrier organic anion transporter family member 1A2 Bromodomain testis-specific protein Pannexin-1 Death-associated protein kinase 1 Cyclin-dependent kinase 1 Glycogen synthase kinase-3 beta G protein-activated inward rectifier potassium channel 2 Short transient receptor potential channel 2 G protein-activated inward rectifier potassium channel 1 Translocator protein Excitatory amino acid transporter 5 G-protein coupled receptor 35 Hepatocyte nuclear factor 4-alpha Transient receptor potential cation channel subfamily V member 3 Dual specificity mitogen-activated protein kinase kinase 4 Nitric oxide synthase, endothelial Methionine aminopeptidase 2 Angiopoietin-1 receptor Gamma-aminobutyric acid receptor subunit alpha-4 Mas-related G-protein coupled receptor member D Lysophosphatidic acid receptor 4 Melanocyte-stimulating hormone receptor Gastrin/cholecystokinin type B receptor NAD-dependent protein deacetylase sirtuin-1 Mitogen-activated protein kinase 10 Gap junction beta-6 protein Gap junction beta-5 protein Mevalonate kinase Galanin receptor type 1 Excitatory amino acid transporter 2 Aurora kinase C Putative P2Y purinoceptor 10 Cyclic nucleotide-gated cation channel alpha-3 Trace amine-associated receptor 3 Trace amine-associated receptor 5 Gap junction gamma-1 protein fMet-Leu-Phe receptor G-protein coupled receptor 12 Bile salt export pump Beta-adrenergic receptor kinase 2 Retinoic acid receptor RXR-alpha Lysine-specific demethylase 7A Sodium/myo-inositol cotransporter ATP-sensitive inward rectifier potassium channel 15 Bcl-2-like protein 1 P2Y purinoceptor 14 Neurotensin receptor type 1 Aurora kinase B Sphingosine 1-phosphate receptor 4 Squalene synthase Gap junction beta-4 protein Neuropeptide Y receptor type 1 Thromboxane A2 receptor Geranylgeranyl pyrophosphate synthase Neuronal acetylcholine receptor subunit alpha-9 Metabotropic glutamate receptor 2 Lysophosphatidic acid receptor 2 Interleukin-17A Transient receptor potential cation channel subfamily V member 6 Lysophosphatidic acid receptor 1 cAMP-specific 3',5'-cyclic phosphodiesterase 4D Cholecystokinin receptor type A Gamma-aminobutyric acid receptor subunit beta-1 Serine/threonine-protein kinase N1 Steroid hormone receptor ERR1 Interferon-induced, double-stranded RNA-activated protein kinase Gamma-aminobutyric acid receptor subunit gamma-3 Excitatory amino acid transporter 4 Gamma-aminobutyric acid receptor subunit theta Receptor tyrosine-protein kinase erbB-4 Transient receptor potential cation channel subfamily M member 6 Gap junction alpha-8 protein Vasoactive intestinal polypeptide receptor 1 Gap junction alpha-10 protein Gap junction alpha-5 protein Phospholipase D2 Serine/threonine-protein kinase 3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A Cytochrome P450 1B1 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C Cyclin-G-associated kinase Free fatty acid receptor 2 G protein-coupled receptor kinase 6 Bromodomain-containing protein 3 Nuclear receptor subfamily 1 group D member 1 Sphingosine 1-phosphate receptor 5 cGMP-gated cation channel alpha-1 Sphingosine 1-phosphate receptor 5 Excitatory amino acid transporter 1 N-formyl peptide receptor 2 B2 bradykinin receptor Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B Metabotropic glutamate receptor 8 B1 bradykinin receptor Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Potassium voltage-gated channel subfamily A member 2 Sphingosine 1-phosphate receptor 2 Sphingosine 1-phosphate receptor 1 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Interstitial collagenase Short transient receptor potential channel 6 Oxoeicosanoid receptor 1 Voltage-dependent L-type calcium channel subunit alpha-1S Short transient receptor potential channel 4 Sphingosine 1-phosphate receptor 2 Probable G-protein coupled receptor 63 Mitogen-activated protein kinase 8 Histone acetyltransferase KAT2B Neuropeptide FF receptor 2 Prostaglandin F2-alpha receptor P2Y purinoceptor 6 Fatty-acid amide hydrolase 1 cAMP-dependent protein kinase catalytic subunit alpha Fatty-acid amide hydrolase 2 Gap junction beta-1 protein Mitogen-activated protein kinase 9 Platelet-activating factor receptor Aquaporin-1 Solute carrier family 15 member 1 Beta-adrenergic receptor kinase 1 Calcium/calmodulin-dependent protein kinase type II subunit beta Serine/threonine-protein kinase pim-2 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Serine palmitoyltransferase 2 Leukotriene B4 receptor 2 Nitric oxide synthase, brain Inhibitor of nuclear factor kappa-B kinase subunit alpha Serine/threonine-protein kinase N2 Cathepsin K Type-2 angiotensin II receptor Presenilin-1 Aurora kinase A Cyclin-dependent-like kinase 5 Casein kinase I isoform delta Lysine-specific demethylase 2A Histamine H3 receptor Neuropeptide Y receptor type 2 Mucolipin-1 Potassium channel subfamily K member 3 Leukotriene B4 receptor 1 Pannexin-3 Casein kinase I isoform epsilon TRAF2 and NCK-interacting protein kinase Cathepsin Z Growth hormone secretagogue receptor type 1 cAMP-dependent protein kinase catalytic subunit beta Serine palmitoyltransferase 1 Glucocorticoid receptor Gamma-aminobutyric acid receptor subunit gamma-2 G protein-activated inward rectifier potassium channel 4 Gap junction beta-7 protein Gap junction gamma-2 protein Gap junction alpha-9 protein Platelet-activating factor acetylhydrolase Serum amyloid P-component Neurotensin receptor type 2 Protein kinase C eta type Bromodomain-containing protein 2 Serine/threonine-protein kinase pim-1 G protein-coupled receptor kinase 4 Aquaporin-9 Neuromedin-K receptor Melanocortin receptor 4 Melanocortin receptor 5 Glutamate receptor ionotropic, kainate 1 Apoptosis regulator Bcl-2 Tyrosine-protein kinase Lck Sodium/myo-inositol cotransporter 2 Oxysterols receptor LXR-alpha Cystathionine gamma-lyase Transient receptor potential cation channel subfamily M member 1 Gap junction beta-3 protein GTPase NRas Gamma-aminobutyric acid receptor subunit pi Gamma-aminobutyric acid receptor subunit delta Gamma-aminobutyric acid receptor subunit rho-3 Inositol 1,4,5-trisphosphate receptor type 2 Metabotropic glutamate receptor 4 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor Histamine H3 receptor Metabotropic glutamate receptor 1 Potassium voltage-gated channel subfamily A member 6 Metabotropic glutamate receptor 5 Tyrosine-protein kinase Yes Phosphorylase b kinase gamma catalytic chain, liver/testis isoform 3-phosphoinositide-dependent protein kinase 1 Cystathionine beta-synthase Dopamine beta-hydroxylase Mitogen-activated protein kinase 14 Tubulin beta-3 chain Inhibitor of nuclear factor kappa-B kinase subunit beta Metabotropic glutamate receptor 5 Lanosterol 14-alpha demethylase High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Histone lysine demethylase PHF8 Neuropeptide FF receptor 1 Sphingosine 1-phosphate receptor 3 Gap junction alpha-1 protein Purine nucleoside phosphorylase Gap junction beta-2 protein Neurotensin receptor type 2
Min number of nutrients and drugs interact with Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1 and Glycogen synthase kinase-3 beta
Apoptosis regulator Bcl-2 NAD-dependent protein deacetylase sirtuin-1 Glycogen synthase kinase-3 beta
action argmin
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?v WHERE { { SELECT DISTINCT ( MIN ( ?q ) AS ?z ) { SELECT DISTINCT ?x ( COUNT ( ?t ) AS ?q ) WHERE { ?t rdf:type ?b . VALUES ( ?b ) { ( ontology:nutrient ) ( ontology:drug ) } } GROUP BY ?x } } . { SELECT DISTINCT ?v ( COUNT ( ?a ) AS ?c ) WHERE { VALUES ( ?o ) { ( ontology:nutrient ) ( ontology:drug ) } . ?a rdf:type ?o } GROUP BY ?v } . FILTER ( ?c = ?z ) }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q425201 Q21113719 Q5514576
P129
Q79529
USER
Which chemical substances can communicate with Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1 and Glycogen synthase kinase-3 beta ?
(c(Q79529),P129,Q425201) (c(Q79529),P129,Q21113719) (c(Q79529),P129,Q5514576)
action union
action filter_type
action find
entity Q425201
relation P129
type Q79529
action filter_type
action find
entity Q21113719
relation P129
type Q79529
action filter_type
action find
entity Q5514576
relation P129
type Q79529
[{'concept': 'Q79529'}, 'P129', 'Q425201'] [{'concept': 'Q79529'}, 'P129', 'Q21113719'] [{'concept': 'Q79529'}, 'P129', 'Q5514576']
SELECT DISTINCT ?q WHERE { VALUES ( ?z ) { ( resource:Q425201 ) ( resource:Q21113719 ) } . ?z property:P129 ?q }
Apoptosis regulator Bcl-2 NAD-dependent protein deacetylase sirtuin-1 Glycogen synthase kinase-3 beta
action union
action filter_type
action find
entity Apoptosis regulator Bcl-2
relation physically interacts with
type chemical substance
action filter_type
action find
entity NAD-dependent protein deacetylase sirtuin-1
relation physically interacts with
type chemical substance
action filter_type
action find
entity Glycogen synthase kinase-3 beta
relation physically interacts with
type chemical substance
[{'concept': 'chemical substance'}, 'physically interacts with', 'Apoptosis regulator Bcl-2'] [{'concept': 'chemical substance'}, 'physically interacts with', 'NAD-dependent protein deacetylase sirtuin-1'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Glycogen synthase kinase-3 beta']
SELECT DISTINCT ?q WHERE { VALUES ( ?z ) { ( resource:Apoptosis_regulator_Bcl-2 ) ( resource:NAD-dependent_protein_deacetylase_sirtuin-1 ) } . ?z property:physically_interacts_with ?q }
[]
chemical substance
Q18002993 Q7392863 Q10382411
SYSTEM
navitoclax, SRT1720, tideglusib
Q18002993 Q7392863 Q10382411
(c(Q79529),P129,Q425201) (c(Q79529),P129,Q21113719) (c(Q79529),P129,Q5514576)
action union
action filter_type
action find
entity Q425201
relation P129
type Q79529
action filter_type
action find
entity Q21113719
relation P129
type Q79529
action filter_type
action find
entity Q5514576
relation P129
type Q79529
[ANSWERS] can communicate with Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1 and Glycogen synthase kinase-3 beta
[{'concept': 'Q79529'}, 'P129', 'Q425201'] [{'concept': 'Q79529'}, 'P129', 'Q21113719'] [{'concept': 'Q79529'}, 'P129', 'Q5514576']
SELECT DISTINCT ?q WHERE { VALUES ( ?z ) { ( resource:Q425201 ) ( resource:Q21113719 ) } . ?z property:P129 ?q }
navitoclax SRT1720 tideglusib
Navitoclax, SRT1720 and tideglusib can communicate with Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1 and Glycogen synthase kinase-3 beta
navitoclax SRT1720 tideglusib
action union
action filter_type
action find
entity Apoptosis regulator Bcl-2
relation physically interacts with
type chemical substance
action filter_type
action find
entity NAD-dependent protein deacetylase sirtuin-1
relation physically interacts with
type chemical substance
action filter_type
action find
entity Glycogen synthase kinase-3 beta
relation physically interacts with
type chemical substance
[{'concept': 'chemical substance'}, 'physically interacts with', 'Apoptosis regulator Bcl-2'] [{'concept': 'chemical substance'}, 'physically interacts with', 'NAD-dependent protein deacetylase sirtuin-1'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Glycogen synthase kinase-3 beta']
SELECT DISTINCT ?q WHERE { VALUES ( ?z ) { ( resource:Apoptosis_regulator_Bcl-2 ) ( resource:NAD-dependent_protein_deacetylase_sirtuin-1 ) } . ?z property:physically_interacts_with ?q }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q425201
P688
Q863908
USER
Which nucleic acid sequence encodes Apoptosis regulator Bcl-2 ?
(c(Q863908),P688,Q425201)
action filter_type
action find_reverse
entity Q425201
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q425201']
SELECT DISTINCT ?n WHERE { ?n property:P688 resource:Q425201 . ?n rdf:type ontology:Q863908 }
Apoptosis regulator Bcl-2
action filter_type
action find_reverse
entity Apoptosis regulator Bcl-2
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Apoptosis regulator Bcl-2']
SELECT DISTINCT ?n WHERE { ?n property:encodes resource:Apoptosis_regulator_Bcl-2 . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q14863436
SYSTEM
BCL2
Q14863436
(c(Q863908),P688,Q425201)
action filter_type
action find_reverse
entity Q425201
relation P688
type Q863908
[ANSWER] encodes Apoptosis regulator Bcl-2
[{'concept': 'Q863908'}, 'P688', 'Q425201']
SELECT DISTINCT ?n WHERE { ?n property:P688 resource:Q425201 . ?n rdf:type ontology:Q863908 }
BCL2
BCL2 encodes Apoptosis regulator Bcl-2
BCL2
action filter_type
action find_reverse
entity Apoptosis regulator Bcl-2
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Apoptosis regulator Bcl-2']
SELECT DISTINCT ?n WHERE { ?n property:encodes resource:Apoptosis_regulator_Bcl-2 . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q425201
P703
Q16521
USER
Which taxon is Apoptosis regulator Bcl-2 found in ?
(Q425201,P703,c(Q16521))
action filter_type
action find
entity Q425201
relation P703
type Q16521
['Q425201', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?l WHERE { resource:Q425201 property:P703 ?l . ?l rdf:type ontology:Q16521 }
Apoptosis regulator Bcl-2
action filter_type
action find
entity Apoptosis regulator Bcl-2
relation found in taxon
type taxon
['Apoptosis regulator Bcl-2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?l WHERE { resource:Apoptosis_regulator_Bcl-2 property:found_in_taxon ?l . ?l rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q425201,P703,c(Q16521))
action filter_type
action find
entity Q425201
relation P703
type Q16521
Which taxon is Apoptosis regulator Bcl-2 found in
['Q425201', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?l WHERE { resource:Q425201 property:P703 ?l . ?l rdf:type ontology:Q16521 }
Homo sapiens
Which taxon is Apoptosis regulator Bcl-2 found in
Homo sapiens
action filter_type
action find
entity Apoptosis regulator Bcl-2
relation found in taxon
type taxon
['Apoptosis regulator Bcl-2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?l WHERE { resource:Apoptosis_regulator_Bcl-2 property:found_in_taxon ?l . ?l rdf:type ontology:taxon }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q22136706
Q16521
USER
And how about UDP-N-acetylglucosamine 2-epimerase    ECIAI39_3441?
(Q22136706,P703,c(Q16521))
action filter_type
action find
entity Q22136706
relation P703
type Q16521
['Q22136706', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?t WHERE { resource:Q22136706 property:P703 ?t . ?t rdf:type ontology:Q16521 }
UDP-N-acetylglucosamine 2-epimerase    ECIAI39_3441
action filter_type
action find
entity UDP-N-acetylglucosamine 2-epimerase    ECIAI39_3441
relation found in taxon
type taxon
['UDP-N-acetylglucosamine 2-epimerase    ECIAI39_3441', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?t WHERE { resource:UDP-N-acetylglucosamine_2-epimerase____ECIAI39_3441 property:found_in_taxon ?t . ?t rdf:type ontology:taxon }
[]
taxon
Q21102933
SYSTEM
Escherichia coli IAI39
Q21102933
(Q22136706,P703,c(Q16521))
action filter_type
action find
entity Q22136706
relation P703
type Q16521
[ANSWER]
['Q22136706', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?t WHERE { resource:Q22136706 property:P703 ?t . ?t rdf:type ontology:Q16521 }
Escherichia coli IAI39
Escherichia coli IAI39
action filter_type
action find
entity UDP-N-acetylglucosamine 2-epimerase    ECIAI39_3441
relation found in taxon
type taxon
['UDP-N-acetylglucosamine 2-epimerase    ECIAI39_3441', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?t WHERE { resource:UDP-N-acetylglucosamine_2-epimerase____ECIAI39_3441 property:found_in_taxon ?t . ?t rdf:type ontology:taxon }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q1102
P186
Q79529 Q860861 Q16970
USER
Which chemical substances are used to manufacture greater number of sculptures and churches than plutonium ?
(c(Q860861)|c(Q16970),P186,c(Q79529))
action greater
action union
action find_reverse_tuple_counts
relation P186
type Q79529
type Q860861
action find_reverse_tuple_counts
relation P186
type Q79529
type Q16970
action count
action filter_multi_types
action find_reverse
entity Q1102
relation P186
type Q860861
type Q16970
[[{'concept': 'Q860861'}, {'concept': 'Q16970'}], 'P186', {'concept': 'Q79529'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?l ) AS ?f ) WHERE { { ?l property:P186 ?y . ?y rdf:type ontology:Q79529 . ?l rdf:type ontology:Q860861 } UNION { ?y rdf:type ontology:Q79529 . ?l rdf:type ontology:Q16970 . ?l property:P186 ?y } } GROUP BY ?y } . { SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) WHERE { ?b property:P186 resource:Q1102 . { { ?b rdf:type ontology:Q860861 } UNION { ?b rdf:type ontology:Q16970 } } } } . FILTER ( ?f > ?j ) }
plutonium
action greater
action union
action find_reverse_tuple_counts
relation material used
type chemical substance
type sculpture
action find_reverse_tuple_counts
relation material used
type chemical substance
type church
action count
action filter_multi_types
action find_reverse
entity plutonium
relation material used
type sculpture
type church
[[{'concept': 'sculpture'}, {'concept': 'church'}], 'material used', {'concept': 'chemical substance'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?l ) AS ?f ) WHERE { { ?l property:material_used ?y . ?y rdf:type ontology:chemical_substance . ?l rdf:type ontology:sculpture } UNION { ?y rdf:type ontology:chemical_substance . ?l rdf:type ontology:church . ?l property:material_used ?y } } GROUP BY ?y } . { SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) WHERE { ?b property:material_used resource:plutonium . { { ?b rdf:type ontology:sculpture } UNION { ?b rdf:type ontology:church } } } } . FILTER ( ?f > ?j ) }
[]
chemical substance sculpture church
Q708 Q897 Q2641430
SYSTEM
lead, gold, high-density polyethylene
Q2641430 Q708 Q897 Q146174 Q127980
(c(Q860861)|c(Q16970),P186,c(Q79529))
action greater
action union
action find_reverse_tuple_counts
relation P186
type Q79529
type Q860861
action find_reverse_tuple_counts
relation P186
type Q79529
type Q16970
action count
action filter_multi_types
action find_reverse
entity Q1102
relation P186
type Q860861
type Q16970
[ANSWERS] are used to manufacture greater number of sculptures and churches than plutonium
[[{'concept': 'Q860861'}, {'concept': 'Q16970'}], 'P186', {'concept': 'Q79529'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?l ) AS ?f ) WHERE { { ?l property:P186 ?y . ?y rdf:type ontology:Q79529 . ?l rdf:type ontology:Q860861 } UNION { ?y rdf:type ontology:Q79529 . ?l rdf:type ontology:Q16970 . ?l property:P186 ?y } } GROUP BY ?y } . { SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) WHERE { ?b property:P186 resource:Q1102 . { { ?b rdf:type ontology:Q860861 } UNION { ?b rdf:type ontology:Q16970 } } } } . FILTER ( ?f > ?j ) }
high-density polyethylene lead gold polypropylene fat
Lead, gold and high-density polyethylene are used to manufacture greater number of sculptures and churches than plutonium
lead gold high-density polyethylene
action greater
action union
action find_reverse_tuple_counts
relation material used
type chemical substance
type sculpture
action find_reverse_tuple_counts
relation material used
type chemical substance
type church
action count
action filter_multi_types
action find_reverse
entity plutonium
relation material used
type sculpture
type church
[[{'concept': 'sculpture'}, {'concept': 'church'}], 'material used', {'concept': 'chemical substance'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?l ) AS ?f ) WHERE { { ?l property:material_used ?y . ?y rdf:type ontology:chemical_substance . ?l rdf:type ontology:sculpture } UNION { ?y rdf:type ontology:chemical_substance . ?l rdf:type ontology:church . ?l property:material_used ?y } } GROUP BY ?y } . { SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) WHERE { ?b property:material_used resource:plutonium . { { ?b rdf:type ontology:sculpture } UNION { ?b rdf:type ontology:church } } } } . FILTER ( ?f > ?j ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q15978631
P427
Q3343211
USER
Which zoological nomenclature is the taxonomic type of Homo sapiens ?
(Q15978631,P427,c(Q3343211))
action filter_type
action find
entity Q15978631
relation P427
type Q3343211
['Q15978631', 'P427', {'concept': 'Q3343211'}]
SELECT DISTINCT ?d WHERE { resource:Q15978631 property:P427 ?d . ?d rdf:type ontology:Q3343211 }
Homo sapiens
action filter_type
action find
entity Homo sapiens
relation taxonomic type
type zoological nomenclature
['Homo sapiens', 'taxonomic type', {'concept': 'zoological nomenclature'}]
SELECT DISTINCT ?d WHERE { resource:Homo_sapiens property:taxonomic_type ?d . ?d rdf:type ontology:zoological_nomenclature }
[]
zoological nomenclature
Q1043
SYSTEM
Carl Linnaeus
Q1043
(Q15978631,P427,c(Q3343211))
action filter_type
action find
entity Q15978631
relation P427
type Q3343211
[ANSWER] is the taxonomic type of Homo sapiens
['Q15978631', 'P427', {'concept': 'Q3343211'}]
SELECT DISTINCT ?d WHERE { resource:Q15978631 property:P427 ?d . ?d rdf:type ontology:Q3343211 }
Carl Linnaeus
Carl Linnaeus is the taxonomic type of Homo sapiens
Carl Linnaeus
action filter_type
action find
entity Homo sapiens
relation taxonomic type
type zoological nomenclature
['Homo sapiens', 'taxonomic type', {'concept': 'zoological nomenclature'}]
SELECT DISTINCT ?d WHERE { resource:Homo_sapiens property:taxonomic_type ?d . ?d rdf:type ontology:zoological_nomenclature }
[]