Simple Question (Direct)
Simple Question
Q27739647
P703
Q631147
USER
Which taxon does hypothetical protein    ML2143 belong to ?
(Q27739647,P703,c(Q631147))
action filter_type
action find
entity Q27739647
relation P703
type Q631147
['Q27739647', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?u WHERE { resource:Q27739647 property:P703 ?u . ?u rdf:type ontology:Q631147 }
hypothetical protein    ML2143
action filter_type
action find
entity hypothetical protein    ML2143
relation found in taxon
type infraspecific name
['hypothetical protein    ML2143', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?u WHERE { resource:hypothetical_protein____ML2143 property:found_in_taxon ?u . ?u rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102985
SYSTEM
Mycobacterium leprae TN
Q21102985
(Q27739647,P703,c(Q631147))
action filter_type
action find
entity Q27739647
relation P703
type Q631147
Hypothetical protein ML 2143 belongs to [ANSWER]
['Q27739647', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?u WHERE { resource:Q27739647 property:P703 ?u . ?u rdf:type ontology:Q631147 }
Mycobacterium leprae TN
Hypothetical protein ML 2143 belongs to Mycobacterium leprae TN
Mycobacterium leprae TN
action filter_type
action find
entity hypothetical protein    ML2143
relation found in taxon
type infraspecific name
['hypothetical protein    ML2143', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?u WHERE { resource:hypothetical_protein____ML2143 property:found_in_taxon ?u . ?u rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27739647
P681
Q5058355
USER
What is a component of that nutrient ?
(Q21102985,P681,c(Q5058355))
action filter_type
action find
entity Q27739647
relation P681
type Q5058355
['Q21102985', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?r WHERE { resource:Q27739647 property:P681 ?r . ?r rdf:type ontology:Q5058355 }
hypothetical protein    ML2143
action filter_type
action find
entity hypothetical protein    ML2143
relation cell component
type cellular component
['Mycobacterium leprae TN', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?r WHERE { resource:hypothetical_protein____ML2143 property:cell_component ?r . ?r rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q21102985,P681,c(Q5058355))
action filter_type
action find
entity Q27739647
relation P681
type Q5058355
A component of that nutrient is the [ANSWER]
['Q21102985', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?r WHERE { resource:Q27739647 property:P681 ?r . ?r rdf:type ontology:Q5058355 }
plasma membrane
A component of that nutrient is the plasma membrane
plasma membrane
action filter_type
action find
entity hypothetical protein    ML2143
relation cell component
type cellular component
['Mycobacterium leprae TN', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?r WHERE { resource:hypothetical_protein____ML2143 property:cell_component ?r . ?r rdf:type ontology:cellular_component }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Single entity type|Indirect
P681
Q5058355 Q181394
USER
How many cellular components are the components of lesser number of nutrients than that cellular component ?
(c(Q181394),P681,c(Q5058355))
action count
action less
action find_reverse_tuple_counts
relation P681
type Q5058355
type Q181394
action count
action filter_type
action find_reverse
entity Q29548
relation P681
type Q181394
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?a ) WHERE { { SELECT DISTINCT ?x ( COUNT ( ?c ) AS ?s ) WHERE { ?c property:P681 ?x . ?c rdf:type ontology:Q181394 . ?x rdf:type ontology:Q5058355 } GROUP BY ?x } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?q ) WHERE { ?e property:P681 resource:Q29548 . ?e rdf:type ontology:Q181394 } } . FILTER ( ?s < ?q ) }
action count
action less
action find_reverse_tuple_counts
relation cell component
type cellular component
type nutrient
action count
action filter_type
action find_reverse
entity plasma membrane
relation cell component
type nutrient
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?a ) WHERE { { SELECT DISTINCT ?x ( COUNT ( ?c ) AS ?s ) WHERE { ?c property:cell_component ?x . ?c rdf:type ontology:nutrient . ?x rdf:type ontology:cellular_component } GROUP BY ?x } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?q ) WHERE { ?e property:cell_component resource:plasma_membrane . ?e rdf:type ontology:nutrient } } . FILTER ( ?s < ?q ) }
[]
cellular component nutrient
SYSTEM
148
Q7322268 Q21106124 Q21978575 Q21116315 Q14912978 Q14864171 Q21108229 Q22328732 Q21110192 Q21146508 Q14878067 Q14864978 Q24629101 Q14864977 Q14864971 Q1604780 Q21124326 Q21116899 Q14860843 Q22327688 Q22327479 Q22327686 Q14330626 Q22327683 Q21172343 Q21172341 Q24576567 Q21108045 Q671136 Q22326188 Q21469807 Q14877465 Q189094 Q14876131 Q24629096 Q22328493 Q21120634 Q3824358 Q14864391 Q14864390 Q14914004 Q21095183 Q14873624 Q14329032 Q21199165 Q14905221 Q22326802 Q21199358 Q21759948 Q21097473 Q21105647 Q21198643 Q21106212 Q21423046 Q14864382 Q14353100 Q22326799 Q14911512 Q22325164 Q26253851 Q21136996 Q21103154 Q14863372 Q21181370 Q420927 Q22327404 Q22327654 Q22327015 Q21109092 Q22327525 Q14905147 Q22329412 Q180436 Q22327092 Q21763002 Q15320191 Q21971414 Q21095089 Q22327884 Q14819352 Q21118409 Q14762605 Q14864266 Q21108411 Q21750262 Q21468808 Q21198990 Q21104759 Q14876059 Q21484280 Q21758669 Q22329407 Q22328605 Q14877492 Q14873267 Q22327128 Q21760978 Q21107992 Q22328801 Q5419646 Q21126899 Q14819441 Q1640852 Q2914458 Q21107481 Q21105674 Q21097505 Q22327033 Q14864663 Q14863683 Q21102478 Q14349538 Q22328819 Q138639 Q21120639 Q14330629 Q776995 Q21971286 Q21105988 Q21095308 Q21115425 Q14864857 Q14888035 Q1065756 Q22326843 Q79927 Q180951 Q7168931 Q14906187 Q22327475 Q14864520 Q21112489 Q22328743 Q22328105 Q14860546 Q14860540 Q14864866 Q22328121 Q899827 Q6414172 Q21109697 Q22327736 Q14906135 Q22326919 Q14882095 Q21095620 Q193825 Q22327423
(c(Q181394),P681,c(Q5058355))
action count
action less
action find_reverse_tuple_counts
relation P681
type Q5058355
type Q181394
action count
action filter_type
action find_reverse
entity Q29548
relation P681
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?a ) WHERE { { SELECT DISTINCT ?x ( COUNT ( ?c ) AS ?s ) WHERE { ?c property:P681 ?x . ?c rdf:type ontology:Q181394 . ?x rdf:type ontology:Q5058355 } GROUP BY ?x } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?q ) WHERE { ?e property:P681 resource:Q29548 . ?e rdf:type ontology:Q181394 } } . FILTER ( ?s < ?q ) }
ribbon synapse viral capsid tripartite ATP-independent periplasmic transporter complex viral nucleocapsid mitochondrial nucleoid cell periphery subapical complex Pex17p-Pex14p docking complex organelle membrane contact site mucus layer organelle membrane lipopolysaccharide receptor complex glutamatergic synapse plasma membrane part succinate dehydrogenase complex hemidesmosome protein serine/threonine phosphatase complex complement component C1 complex nuclear outer membrane prospore membrane leading edge presynapse prospore membrane myelin sheath abaxonal region eisosome inner dense plaque of desmosome outer dense plaque of desmosome perisynaptic extracellular matrix molybdopterin synthase complex synaptic vesicle aster dolichyl-phosphate-mannose-protein mannosyltransferase complex receptor complex cell surface compact myelin GABA-ergic synapse cell envelope Sec protein transport complex interleukin-12 complex intracellular intracellular organelle synaptic vesicle membrane synaptic membrane dendritic spine head intercellular bridge endoplasmic reticulum membrane type III protein secretion system complex symbiont-containing vacuole membrane endoplasmic reticulum palmitoyltransferase complex bacterial nucleoid NADH dehydrogenase complex cell pole transmembrane transporter complex riboflavin synthase complex GPI-anchor transamidase complex membrane-bounded organelle presynaptic active zone cell projection alpha-1,6-mannosyltransferase complex stereocilium protein-lipid complex integral component of spine apparatus membrane immunoglobulin complex, circulating inhibitory synapse myelin sheath outer membrane protein complex ribonucleoprotein complex annulate lamellae photosystem II oxygen evolving complex nuclear outer membrane-endoplasmic reticulum membrane network cytoplasmic side of dendritic spine plasma membrane intrinsic component of membrane cytoophidium cilium protein complex involved in cell adhesion polyphosphate kinase complex synaptic cleft plasma lipoprotein particle blood microparticle cellular bud respiratory chain hyaluranon cable midbody cell-substrate junction CNTFR-CLCF1 complex cell division site retromer, tubulation complex periplasmic space perinuclear endoplasmic reticulum membrane phosphatidylinositol 3-kinase complex retromer, cargo-selective complex type II protein secretion system complex envelope PET complex lateral loop cell-cell junction fatty acid beta-oxidation multienzyme complex type I protein secretion system complex ER ubiquitin ligase complex TRAPPI protein complex excitatory synapse cell tip fibrinogen complex Schmidt-Lanterman incisure extracellular space site of polarized growth Nem1-Spo7 phosphatase complex dendritic spine neck DNA repair complex transcriptional repressor complex insulin-like growth factor binding protein complex other organism cell apical part of cell HICS complex peroxisome interleukin-23 complex myelin sheath adaxonal region neuromuscular junction oligosaccharyltransferase complex stereocilium membrane retromer complex Ire1 complex cell leading edge protein-DNA complex melanosome Dsc E3 ubiquitin ligase complex endoplasmic reticulum chromatin perivitelline space CRLF-CLCF1 complex postsynapse extrinsic component of membrane stereocilium tip RNA cap binding complex cell septum basal part of cell clathrin-coated pit cell body intracellular immature spore endomembrane system kinocilium cyclin-dependent protein kinase 5 holoenzyme complex chaperone-mediated autophagy translocation complex contractile ring aspartate carbamoyltransferase complex angiogenin-PRI complex Flemming body extracellular matrix extracellular organelle
148
action count
action less
action find_reverse_tuple_counts
relation cell component
type cellular component
type nutrient
action count
action filter_type
action find_reverse
entity plasma membrane
relation cell component
type nutrient
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?a ) WHERE { { SELECT DISTINCT ?x ( COUNT ( ?c ) AS ?s ) WHERE { ?c property:cell_component ?x . ?c rdf:type ontology:nutrient . ?x rdf:type ontology:cellular_component } GROUP BY ?x } . { SELECT DISTINCT ( COUNT ( ?e ) AS ?q ) WHERE { ?e property:cell_component resource:plasma_membrane . ?e rdf:type ontology:nutrient } } . FILTER ( ?s < ?q ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q29548
P361
Q5058355
USER
Which cellular components are plasma membrane a part of ?
(Q29548,P361,c(Q5058355))
action filter_type
action find
entity Q29548
relation P361
type Q5058355
['Q29548', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?i WHERE { resource:Q29548 property:P361 ?i . ?i rdf:type ontology:Q5058355 }
plasma membrane
action filter_type
action find
entity plasma membrane
relation part of
type cellular component
['plasma membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?i WHERE { resource:plasma_membrane property:part_of ?i . ?i rdf:type ontology:cellular_component }
[]
cellular component
Q899827 Q22330431 Q14864171
SYSTEM
endomembrane system, unencapsulated part of cell, cell periphery
Q899827 Q22330431 Q14864171
(Q29548,P361,c(Q5058355))
action filter_type
action find
entity Q29548
relation P361
type Q5058355
[ANSWERS] are plasma membrane a part of
['Q29548', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?i WHERE { resource:Q29548 property:P361 ?i . ?i rdf:type ontology:Q5058355 }
endomembrane system unencapsulated part of cell cell periphery
Endomembrane system, unencapsulated part of cell and cell periphery are plasma membrane a part of
endomembrane system unencapsulated part of cell cell periphery
action filter_type
action find
entity plasma membrane
relation part of
type cellular component
['plasma membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?i WHERE { resource:plasma_membrane property:part_of ?i . ?i rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q899827 Q22330431 Q14864171
P361
Q5058355
USER
Which cellular components are a part of endomembrane system, unencapsulated part of cell and cell periphery ?
(c(Q5058355),P361,Q899827) (c(Q5058355),P361,Q22330431) (c(Q5058355),P361,Q14864171)
action union
action filter_type
action find_reverse
entity Q899827
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q22330431
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q14864171
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', 'Q899827'] [{'concept': 'Q5058355'}, 'P361', 'Q22330431'] [{'concept': 'Q5058355'}, 'P361', 'Q14864171']
SELECT DISTINCT ?h WHERE { VALUES ( ?j ) { ( resource:Q899827 ) ( resource:Q22330431 ) } . ?h property:P361 ?j }
endomembrane system unencapsulated part of cell cell periphery
action union
action filter_type
action find_reverse
entity endomembrane system
relation part of
type cellular component
action filter_type
action find_reverse
entity unencapsulated part of cell
relation part of
type cellular component
action filter_type
action find_reverse
entity cell periphery
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'endomembrane system'] [{'concept': 'cellular component'}, 'part of', 'unencapsulated part of cell'] [{'concept': 'cellular component'}, 'part of', 'cell periphery']
SELECT DISTINCT ?h WHERE { VALUES ( ?j ) { ( resource:endomembrane_system ) ( resource:unencapsulated_part_of_cell ) } . ?h property:part_of ?j }
[]
cellular component
Q29548 Q29548 Q29548
SYSTEM
plasma membrane
Q29548 Q21095308 Q14860540 Q22328495 Q21109092 Q79927 Q29548 Q3824358 Q29548 Q22328085
(c(Q5058355),P361,Q899827) (c(Q5058355),P361,Q22330431) (c(Q5058355),P361,Q14864171)
action union
action filter_type
action find_reverse
entity Q899827
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q22330431
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q14864171
relation P361
type Q5058355
[ANSWER], [ANSWER] and [ANSWER] are a part of endomembrane system, unencapsulated part of cell and cell periphery
[{'concept': 'Q5058355'}, 'P361', 'Q899827'] [{'concept': 'Q5058355'}, 'P361', 'Q22330431'] [{'concept': 'Q5058355'}, 'P361', 'Q14864171']
SELECT DISTINCT ?h WHERE { VALUES ( ?j ) { ( resource:Q899827 ) ( resource:Q22330431 ) } . ?h property:P361 ?j }
plasma membrane retromer complex clathrin-coated pit spitzenkorper nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum plasma membrane intracellular plasma membrane external encapsulating structure
Plasma membrane, plasma membrane and plasma membrane are a part of endomembrane system, unencapsulated part of cell and cell periphery
plasma membrane plasma membrane plasma membrane
action union
action filter_type
action find_reverse
entity endomembrane system
relation part of
type cellular component
action filter_type
action find_reverse
entity unencapsulated part of cell
relation part of
type cellular component
action filter_type
action find_reverse
entity cell periphery
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'endomembrane system'] [{'concept': 'cellular component'}, 'part of', 'unencapsulated part of cell'] [{'concept': 'cellular component'}, 'part of', 'cell periphery']
SELECT DISTINCT ?h WHERE { VALUES ( ?j ) { ( resource:endomembrane_system ) ( resource:unencapsulated_part_of_cell ) } . ?h property:part_of ?j }
[]