Simple Question (Direct)
Simple Question
Q24093794
P681
Q5058355
USER
Which is the cell component of 4-hydroxybenzoate octaprenyltransferase    Psyr_5031 ?
(Q24093794,P681,c(Q5058355))
action filter_type
action find
entity Q24093794
relation P681
type Q5058355
['Q24093794', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?a WHERE { resource:Q24093794 property:P681 ?a . ?a rdf:type ontology:Q5058355 }
4-hydroxybenzoate octaprenyltransferase    Psyr_5031
action filter_type
action find
entity 4-hydroxybenzoate octaprenyltransferase    Psyr_5031
relation cell component
type cellular component
['4-hydroxybenzoate octaprenyltransferase    Psyr_5031', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?a WHERE { resource:4-hydroxybenzoate_octaprenyltransferase____Psyr_5031 property:cell_component ?a . ?a rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q24093794,P681,c(Q5058355))
action filter_type
action find
entity Q24093794
relation P681
type Q5058355
The [ANSWER] is the cell component of 4-hydroxybenzoate octaprenyltransferase Psyr_5031
['Q24093794', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?a WHERE { resource:Q24093794 property:P681 ?a . ?a rdf:type ontology:Q5058355 }
plasma membrane
The plasma membrane is the cell component of 4-hydroxybenzoate octaprenyltransferase Psyr_5031
plasma membrane
action filter_type
action find
entity 4-hydroxybenzoate octaprenyltransferase    Psyr_5031
relation cell component
type cellular component
['4-hydroxybenzoate octaprenyltransferase    Psyr_5031', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?a WHERE { resource:4-hydroxybenzoate_octaprenyltransferase____Psyr_5031 property:cell_component ?a . ?a rdf:type ontology:cellular_component }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q29548
P361
Q5058355
USER
Which cellular components are that one a part of ?
(Q29548,P361,c(Q5058355))
action filter_type
action find
entity Q29548
relation P361
type Q5058355
['Q29548', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?m WHERE { resource:Q29548 property:P361 ?m . ?m rdf:type ontology:Q5058355 }
plasma membrane
action filter_type
action find
entity plasma membrane
relation part of
type cellular component
['plasma membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?m WHERE { resource:plasma_membrane property:part_of ?m . ?m rdf:type ontology:cellular_component }
[]
cellular component
Q899827 Q22330431 Q14864171
SYSTEM
endomembrane system, unencapsulated part of cell, cell periphery
Q899827 Q22330431 Q14864171
(Q29548,P361,c(Q5058355))
action filter_type
action find
entity Q29548
relation P361
type Q5058355
[ANSWERS] are that one a part of
['Q29548', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?m WHERE { resource:Q29548 property:P361 ?m . ?m rdf:type ontology:Q5058355 }
endomembrane system unencapsulated part of cell cell periphery
Endomembrane system, unencapsulated part of cell and cell periphery are that one a part of
endomembrane system unencapsulated part of cell cell periphery
action filter_type
action find
entity plasma membrane
relation part of
type cellular component
['plasma membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?m WHERE { resource:plasma_membrane property:part_of ?m . ?m rdf:type ontology:cellular_component }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q29548
P361
Q5058355
USER
Are plasma membrane a portion of those ones ?
(Q29548,P361,Q899827) (Q29548,P361,Q22330431) (Q29548,P361,Q14864171)
action is_in
entity prev_answer
action find
entity Q29548
relation P361
['Q29548', 'P361', 'Q899827'] ['Q29548', 'P361', 'Q22330431'] ['Q29548', 'P361', 'Q14864171']
ASK WHERE { resource:Q29548 property:P361 ?r . VALUES ( ?r ) { ( resource:Q899827 ) ( resource:Q22330431 ) ( resource:Q14864171 ) } }
plasma membrane
action is_in
entity prev_answer
action find
entity plasma membrane
relation part of
['plasma membrane', 'part of', 'endomembrane system'] ['plasma membrane', 'part of', 'unencapsulated part of cell'] ['plasma membrane', 'part of', 'cell periphery']
ASK WHERE { resource:plasma_membrane property:part_of ?r . VALUES ( ?r ) { ( resource:endomembrane_system ) ( resource:unencapsulated_part_of_cell ) ( resource:cell_periphery ) } }
[]
cellular component
SYSTEM
YES
(Q29548,P361,Q899827) (Q29548,P361,Q22330431) (Q29548,P361,Q14864171)
action is_in
entity prev_answer
action find
entity Q29548
relation P361
[ANSWER]
['Q29548', 'P361', 'Q899827'] ['Q29548', 'P361', 'Q22330431'] ['Q29548', 'P361', 'Q14864171']
ASK WHERE { resource:Q29548 property:P361 ?r . VALUES ( ?r ) { ( resource:Q899827 ) ( resource:Q22330431 ) ( resource:Q14864171 ) } }
Yes
action is_in
entity prev_answer
action find
entity plasma membrane
relation part of
['plasma membrane', 'part of', 'endomembrane system'] ['plasma membrane', 'part of', 'unencapsulated part of cell'] ['plasma membrane', 'part of', 'cell periphery']
ASK WHERE { resource:plasma_membrane property:part_of ?r . VALUES ( ?r ) { ( resource:endomembrane_system ) ( resource:unencapsulated_part_of_cell ) ( resource:cell_periphery ) } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24093794
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by 4-hydroxybenzoate octaprenyltransferase    Psyr_5031 ?
(c(Q863908),P688,Q24093794)
action filter_type
action find_reverse
entity Q24093794
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24093794']
SELECT DISTINCT ?r WHERE { ?r property:P688 resource:Q24093794 . ?r rdf:type ontology:Q863908 }
4-hydroxybenzoate octaprenyltransferase    Psyr_5031
action filter_type
action find_reverse
entity 4-hydroxybenzoate octaprenyltransferase    Psyr_5031
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', '4-hydroxybenzoate octaprenyltransferase    Psyr_5031']
SELECT DISTINCT ?r WHERE { ?r property:encodes resource:4-hydroxybenzoate_octaprenyltransferase____Psyr_5031 . ?r rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23147323
SYSTEM
4-hydroxybenzoate octaprenyltransferase    Psyr_5031
Q23147323
(c(Q863908),P688,Q24093794)
action filter_type
action find_reverse
entity Q24093794
relation P688
type Q863908
The nucleic acid sequence that is encoded by 4-hydroxybenzoate octaprenyltransferase Psyr_5031 is by 4-hydroxybenzoate octaprenyltransferase Psyr 5031
[{'concept': 'Q863908'}, 'P688', 'Q24093794']
SELECT DISTINCT ?r WHERE { ?r property:P688 resource:Q24093794 . ?r rdf:type ontology:Q863908 }
4-hydroxybenzoate octaprenyltransferase    Psyr_5031
The nucleic acid sequence that is encoded by 4-hydroxybenzoate octaprenyltransferase Psyr_5031 is by 4-hydroxybenzoate octaprenyltransferase Psyr 5031
4-hydroxybenzoate octaprenyltransferase    Psyr_5031
action filter_type
action find_reverse
entity 4-hydroxybenzoate octaprenyltransferase    Psyr_5031
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', '4-hydroxybenzoate octaprenyltransferase    Psyr_5031']
SELECT DISTINCT ?r WHERE { ?r property:encodes resource:4-hydroxybenzoate_octaprenyltransferase____Psyr_5031 . ?r rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24093794
P703
Q631147
USER
Which infraspecific name is that nutrient found in ?
(Q23147323,P703,c(Q631147))
action filter_type
action find
entity Q24093794
relation P703
type Q631147
['Q23147323', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q631147 . resource:Q24093794 property:P703 ?g }
4-hydroxybenzoate octaprenyltransferase    Psyr_5031
action filter_type
action find
entity 4-hydroxybenzoate octaprenyltransferase    Psyr_5031
relation found in taxon
type infraspecific name
['4-hydroxybenzoate octaprenyltransferase    Psyr_5031', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:infraspecific_name . resource:4-hydroxybenzoate_octaprenyltransferase____Psyr_5031 property:found_in_taxon ?g }
[]
infraspecific name
Q21079490
SYSTEM
Pseudomonas syringae pv. syringae B728a
Q21079490
(Q23147323,P703,c(Q631147))
action filter_type
action find
entity Q24093794
relation P703
type Q631147
[ANSWER] is that nutrient found in
['Q23147323', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q631147 . resource:Q24093794 property:P703 ?g }
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a is that nutrient found in
Pseudomonas syringae pv. syringae B728a
action filter_type
action find
entity 4-hydroxybenzoate octaprenyltransferase    Psyr_5031
relation found in taxon
type infraspecific name
['4-hydroxybenzoate octaprenyltransferase    Psyr_5031', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:infraspecific_name . resource:4-hydroxybenzoate_octaprenyltransferase____Psyr_5031 property:found_in_taxon ?g }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type
Q22327511
P361
Q5058355 Q15989253 Q5058355
USER
How many cellular components are a part of greater number of cellular components or parts than postsynaptic cytoskeleton ?
(c(Q5058355),P361,c(Q5058355)|c(Q15989253))
action count
action greater
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action count
action filter_multi_types
action find
entity Q22327511
relation P361
type Q5058355
type Q15989253
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q15989253'}]]
SELECT DISTINCT ( COUNT ( ?d ) AS ?m ) WHERE { { SELECT DISTINCT ?d ( COUNT ( ?w ) AS ?a ) WHERE { VALUES ( ?b ) { ( ontology:Q15989253 ) ( ontology:Q5058355 ) } . ?w rdf:type ?b } GROUP BY ?d } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?j ) WHERE { resource:Q22327511 property:P361 ?k . { ?k rdf:type ?r . VALUES ( ?r ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } } } } . FILTER ( ?a > ?j ) }
postsynaptic cytoskeleton
action count
action greater
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type part
action count
action filter_multi_types
action find
entity postsynaptic cytoskeleton
relation part of
type cellular component
type part
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'part'}]]
SELECT DISTINCT ( COUNT ( ?d ) AS ?m ) WHERE { { SELECT DISTINCT ?d ( COUNT ( ?w ) AS ?a ) WHERE { VALUES ( ?b ) { ( ontology:part ) ( ontology:cellular_component ) } . ?w rdf:type ?b } GROUP BY ?d } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?j ) WHERE { resource:postsynaptic_cytoskeleton property:part_of ?k . { ?k rdf:type ?r . VALUES ( ?r ) { ( ontology:cellular_component ) ( ontology:part ) } } } } . FILTER ( ?a > ?j ) }
[]
cellular component part cellular component
SYSTEM
6
Q22329451 Q21107992 Q22329159 Q22327531 Q22327518 Q29548
(c(Q5058355),P361,c(Q5058355)|c(Q15989253))
action count
action greater
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action count
action filter_multi_types
action find
entity Q22327511
relation P361
type Q5058355
type Q15989253
[ANSWER]
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q15989253'}]]
SELECT DISTINCT ( COUNT ( ?d ) AS ?m ) WHERE { { SELECT DISTINCT ?d ( COUNT ( ?w ) AS ?a ) WHERE { VALUES ( ?b ) { ( ontology:Q15989253 ) ( ontology:Q5058355 ) } . ?w rdf:type ?b } GROUP BY ?d } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?j ) WHERE { resource:Q22327511 property:P361 ?k . { ?k rdf:type ?r . VALUES ( ?r ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } } } } . FILTER ( ?a > ?j ) }
basolateral part of cell ER ubiquitin ligase complex ventral disc microtubule array clathrin coat of synaptic vesicle plasma membrane region plasma membrane
6
action count
action greater
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type part
action count
action filter_multi_types
action find
entity postsynaptic cytoskeleton
relation part of
type cellular component
type part
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'part'}]]
SELECT DISTINCT ( COUNT ( ?d ) AS ?m ) WHERE { { SELECT DISTINCT ?d ( COUNT ( ?w ) AS ?a ) WHERE { VALUES ( ?b ) { ( ontology:part ) ( ontology:cellular_component ) } . ?w rdf:type ?b } GROUP BY ?d } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?j ) WHERE { resource:postsynaptic_cytoskeleton property:part_of ?k . { ?k rdf:type ?r . VALUES ( ?r ) { ( ontology:cellular_component ) ( ontology:part ) } } } } . FILTER ( ?a > ?j ) }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type|Incomplete
Q22330033
P361
Q5058355 Q15989253 Q5058355
USER
And what about capsomere?
(c(Q5058355),P361,c(Q5058355)|c(Q15989253))
action count
action greater
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action count
action filter_multi_types
action find
entity Q22330033
relation P361
type Q5058355
type Q15989253
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q15989253'}]]
SELECT DISTINCT ( COUNT ( ?z ) AS ?b ) WHERE { { SELECT DISTINCT ?z ( COUNT ( ?k ) AS ?n ) WHERE { ?k rdf:type ?f . VALUES ( ?f ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } } GROUP BY ?z } . { SELECT DISTINCT ( COUNT ( ?w ) AS ?m ) WHERE { resource:Q22330033 property:P361 ?w . { { ?w rdf:type ontology:Q15989253 } UNION { ?w rdf:type ontology:Q5058355 } } } } . FILTER ( ?n > ?m ) }
capsomere
action count
action greater
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type part
action count
action filter_multi_types
action find
entity capsomere
relation part of
type cellular component
type part
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'part'}]]
SELECT DISTINCT ( COUNT ( ?z ) AS ?b ) WHERE { { SELECT DISTINCT ?z ( COUNT ( ?k ) AS ?n ) WHERE { ?k rdf:type ?f . VALUES ( ?f ) { ( ontology:cellular_component ) ( ontology:part ) } } GROUP BY ?z } . { SELECT DISTINCT ( COUNT ( ?w ) AS ?m ) WHERE { resource:capsomere property:part_of ?w . { { ?w rdf:type ontology:part } UNION { ?w rdf:type ontology:cellular_component } } } } . FILTER ( ?n > ?m ) }
[]
cellular component part cellular component
SYSTEM
6
Q22329451 Q21107992 Q22329159 Q22327531 Q22327518 Q29548
(c(Q5058355),P361,c(Q5058355)|c(Q15989253))
action count
action greater
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action count
action filter_multi_types
action find
entity Q22330033
relation P361
type Q5058355
type Q15989253
[ANSWER]
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q15989253'}]]
SELECT DISTINCT ( COUNT ( ?z ) AS ?b ) WHERE { { SELECT DISTINCT ?z ( COUNT ( ?k ) AS ?n ) WHERE { ?k rdf:type ?f . VALUES ( ?f ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } } GROUP BY ?z } . { SELECT DISTINCT ( COUNT ( ?w ) AS ?m ) WHERE { resource:Q22330033 property:P361 ?w . { { ?w rdf:type ontology:Q15989253 } UNION { ?w rdf:type ontology:Q5058355 } } } } . FILTER ( ?n > ?m ) }
basolateral part of cell ER ubiquitin ligase complex ventral disc microtubule array clathrin coat of synaptic vesicle plasma membrane region plasma membrane
6
action count
action greater
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type part
action count
action filter_multi_types
action find
entity capsomere
relation part of
type cellular component
type part
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'part'}]]
SELECT DISTINCT ( COUNT ( ?z ) AS ?b ) WHERE { { SELECT DISTINCT ?z ( COUNT ( ?k ) AS ?n ) WHERE { ?k rdf:type ?f . VALUES ( ?f ) { ( ontology:cellular_component ) ( ontology:part ) } } GROUP BY ?z } . { SELECT DISTINCT ( COUNT ( ?w ) AS ?m ) WHERE { resource:capsomere property:part_of ?w . { { ?w rdf:type ontology:part } UNION { ?w rdf:type ontology:cellular_component } } } } . FILTER ( ?n > ?m ) }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q8386 Q181394
USER
Which nutrients do approximately 43 drugs and nutrients contact with ?
(c(Q8386)|c(Q181394),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 43
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?r ) ?d WHERE { ?m rdf:type ?o . VALUES ( ?o ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } } GROUP BY ?d } . FILTER ( ?r = 43 ) }
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 43
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?r ) ?d WHERE { ?m rdf:type ?o . VALUES ( ?o ) { ( ontology:drug ) ( ontology:nutrient ) } } GROUP BY ?d } . FILTER ( ?r = 43 ) }
[]
nutrient drug nutrient
Q2034004 Q1949517 Q21115043
SYSTEM
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A, 5-hydroxytryptamine receptor 1A
Q309513 Q21115043 Q1949517 Q2034004
(c(Q8386)|c(Q181394),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 43
Approximately 43 drugs and nutrients contact receptor [ANSWERS]
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?r ) ?d WHERE { ?m rdf:type ?o . VALUES ( ?o ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } } GROUP BY ?d } . FILTER ( ?r = 43 ) }
Histamine H1 receptor 5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A D(2) dopamine receptor
Approximately 43 drugs and nutrients contact receptor D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A and 5-hydroxytryptamine receptor 1A
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 1A
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 43
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?r ) ?d WHERE { ?m rdf:type ?o . VALUES ( ?o ) { ( ontology:drug ) ( ontology:nutrient ) } } GROUP BY ?d } . FILTER ( ?r = 43 ) }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q2034004 Q1949517 Q21115043
P702
Q863908
USER
What are the gene that encodes those nutrients ?
(Q2034004,P702,c(Q863908)) (Q1949517,P702,c(Q863908)) (Q21115043,P702,c(Q863908))
action filter_type
action find
entity prev_answer
relation P702
type Q863908
['Q2034004', 'P702', {'concept': 'Q863908'}] ['Q1949517', 'P702', {'concept': 'Q863908'}] ['Q21115043', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?p property:P702 ?g . ?g rdf:type ontology:Q863908 . VALUES ( ?p ) { ( resource:Q309513 ) ( resource:Q21115043 ) ( resource:Q1949517 ) } }
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 1A
action filter_type
action find
entity prev_answer
relation encoded by
type nucleic acid sequence
['D(2) dopamine receptor', 'encoded by', {'concept': 'nucleic acid sequence'}] ['5-hydroxytryptamine receptor 2A', 'encoded by', {'concept': 'nucleic acid sequence'}] ['5-hydroxytryptamine receptor 1A', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?p property:encoded_by ?g . ?g rdf:type ontology:nucleic_acid_sequence . VALUES ( ?p ) { ( resource:Histamine_H1_receptor ) ( resource:5-hydroxytryptamine_receptor_1A ) ( resource:5-hydroxytryptamine_receptor_2A ) } }
[]
nucleic acid sequence
Q15335165 Q14891424 Q238509
SYSTEM
DRD2, HTR2A, HTR1A
Q15335165 Q14891424 Q238509
(Q2034004,P702,c(Q863908)) (Q1949517,P702,c(Q863908)) (Q21115043,P702,c(Q863908))
action filter_type
action find
entity prev_answer
relation P702
type Q863908
The gene that encodes those nutrients are the [ANSWERS]
['Q2034004', 'P702', {'concept': 'Q863908'}] ['Q1949517', 'P702', {'concept': 'Q863908'}] ['Q21115043', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?p property:P702 ?g . ?g rdf:type ontology:Q863908 . VALUES ( ?p ) { ( resource:Q309513 ) ( resource:Q21115043 ) ( resource:Q1949517 ) } }
DRD2 HTR2A HTR1A
The gene that encodes those nutrients are the DRD2, HTR2A and HTR1A
DRD2 HTR2A HTR1A
action filter_type
action find
entity prev_answer
relation encoded by
type nucleic acid sequence
['D(2) dopamine receptor', 'encoded by', {'concept': 'nucleic acid sequence'}] ['5-hydroxytryptamine receptor 2A', 'encoded by', {'concept': 'nucleic acid sequence'}] ['5-hydroxytryptamine receptor 1A', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?p property:encoded_by ?g . ?g rdf:type ontology:nucleic_acid_sequence . VALUES ( ?p ) { ( resource:Histamine_H1_receptor ) ( resource:5-hydroxytryptamine_receptor_1A ) ( resource:5-hydroxytryptamine_receptor_2A ) } }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q15335165 Q14891424 Q238509
P702
Q181394
USER
What are the gene that are encoded by those nucleic acid sequences ?
(c(Q181394),P702,Q15335165) (c(Q181394),P702,Q14891424) (c(Q181394),P702,Q238509)
action filter_type
action find_reverse
entity prev_answer
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q15335165'] [{'concept': 'Q181394'}, 'P702', 'Q14891424'] [{'concept': 'Q181394'}, 'P702', 'Q238509']
SELECT DISTINCT ?q WHERE { VALUES ( ?n ) { ( resource:Q15335165 ) ( resource:Q14891424 ) ( resource:Q238509 ) } . ?q property:P702 ?n . ?q rdf:type ontology:Q181394 }
DRD2 HTR2A HTR1A
action filter_type
action find_reverse
entity prev_answer
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'DRD2'] [{'concept': 'nutrient'}, 'encoded by', 'HTR2A'] [{'concept': 'nutrient'}, 'encoded by', 'HTR1A']
SELECT DISTINCT ?q WHERE { VALUES ( ?n ) { ( resource:DRD2 ) ( resource:HTR2A ) ( resource:HTR1A ) } . ?q property:encoded_by ?n . ?q rdf:type ontology:nutrient }
[]
nutrient
Q2034004 Q1949517 Q21136931
SYSTEM
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A, Dopamine receptor D2, isoform CRA_c
Q2034004 Q21136931 Q1949517 Q21115043
(c(Q181394),P702,Q15335165) (c(Q181394),P702,Q14891424) (c(Q181394),P702,Q238509)
action filter_type
action find_reverse
entity prev_answer
relation P702
type Q181394
[ANSWERS]
[{'concept': 'Q181394'}, 'P702', 'Q15335165'] [{'concept': 'Q181394'}, 'P702', 'Q14891424'] [{'concept': 'Q181394'}, 'P702', 'Q238509']
SELECT DISTINCT ?q WHERE { VALUES ( ?n ) { ( resource:Q15335165 ) ( resource:Q14891424 ) ( resource:Q238509 ) } . ?q property:P702 ?n . ?q rdf:type ontology:Q181394 }
D(2) dopamine receptor Dopamine receptor D2, isoform CRA_c 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 1A
The gene that are encoded by those nucleic acid sequences are D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A and Dopamine receptor D2, isoform CRA c
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A Dopamine receptor D2, isoform CRA_c
action filter_type
action find_reverse
entity prev_answer
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'DRD2'] [{'concept': 'nutrient'}, 'encoded by', 'HTR2A'] [{'concept': 'nutrient'}, 'encoded by', 'HTR1A']
SELECT DISTINCT ?q WHERE { VALUES ( ?n ) { ( resource:DRD2 ) ( resource:HTR2A ) ( resource:HTR1A ) } . ?q property:encoded_by ?n . ?q rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q238509
P684
Q863908
USER
Which nucleic acid sequence is an orthologous gene for HTR1A ?
(Q238509,P684,c(Q863908))
action filter_type
action find
entity Q238509
relation P684
type Q863908
['Q238509', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q238509 property:P684 ?n . ?n rdf:type ontology:Q863908 }
HTR1A
action filter_type
action find
entity HTR1A
relation ortholog
type nucleic acid sequence
['HTR1A', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:HTR1A property:ortholog ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18251363
SYSTEM
Htr1a
Q18251363
(Q238509,P684,c(Q863908))
action filter_type
action find
entity Q238509
relation P684
type Q863908
[ANSWER] is an orthologous gene for HTR1A
['Q238509', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q238509 property:P684 ?n . ?n rdf:type ontology:Q863908 }
Htr1a
Htr1a is an orthologous gene for HTR1A
Htr1a
action filter_type
action find
entity HTR1A
relation ortholog
type nucleic acid sequence
['HTR1A', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:HTR1A property:ortholog ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q18251363 Q23594841
P702
Q181394
USER
Is 3,4-dihydroxy-2-butanone-4-phosphate synthase    BDGL_000093 encoded by that nucleic acid sequence ?
(Q23594841,P702,Q18251363)
action is_in
entity Q23594841
action find
entity Q18251363
relation P702
['Q23594841', 'P702', 'Q18251363']
ASK WHERE { resource:Q18251363 property:P702 resource:Q23594841 }
Htr1a 3,4-dihydroxy-2-butanone-4-phosphate synthase    BDGL_000093
action is_in
entity 3,4-dihydroxy-2-butanone-4-phosphate synthase    BDGL_000093
action find
entity Htr1a
relation encoded by
['3,4-dihydroxy-2-butanone-4-phosphate synthase    BDGL_000093', 'encoded by', 'Htr1a']
ASK WHERE { resource:Htr1a property:encoded_by resource:3,4-dihydroxy-2-butanone-4-phosphate_synthase____BDGL_000093 }
[]
nutrient
SYSTEM
NO
(Q23594841,P702,Q18251363)
action is_in
entity Q23594841
action find
entity Q18251363
relation P702
[ANSWER]
['Q23594841', 'P702', 'Q18251363']
ASK WHERE { resource:Q18251363 property:P702 resource:Q23594841 }
No
action is_in
entity 3,4-dihydroxy-2-butanone-4-phosphate synthase    BDGL_000093
action find
entity Htr1a
relation encoded by
['3,4-dihydroxy-2-butanone-4-phosphate synthase    BDGL_000093', 'encoded by', 'Htr1a']
ASK WHERE { resource:Htr1a property:encoded_by resource:3,4-dihydroxy-2-butanone-4-phosphate_synthase____BDGL_000093 }
[]