Simple Question (Direct)
Simple Question
Q21123684
P702
Q863908
USER
What is the gene that encodes Protein-arginine deiminase type-1 ?
(Q21123684,P702,c(Q863908))
action filter_type
action find
entity Q21123684
relation P702
type Q863908
['Q21123684', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q21123684 property:P702 ?a . ?a rdf:type ontology:Q863908 }
Protein-arginine deiminase type-1
action filter_type
action find
entity Protein-arginine deiminase type-1
relation encoded by
type nucleic acid sequence
['Protein-arginine deiminase type-1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:Protein-arginine_deiminase_type-1 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18039717
SYSTEM
PADI1
Q18039717
(Q21123684,P702,c(Q863908))
action filter_type
action find
entity Q21123684
relation P702
type Q863908
The gene that encodes Protein-arginine deiminase type-1 is called [ANSWER]
['Q21123684', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q21123684 property:P702 ?a . ?a rdf:type ontology:Q863908 }
PADI1
The gene that encodes Protein-arginine deiminase type-1 is called PADI1
PADI1
action filter_type
action find
entity Protein-arginine deiminase type-1
relation encoded by
type nucleic acid sequence
['Protein-arginine deiminase type-1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:Protein-arginine_deiminase_type-1 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21123684
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by Protein-arginine deiminase type-1 ?
(c(Q863908),P688,Q21123684)
action filter_type
action find_reverse
entity Q21123684
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21123684']
SELECT DISTINCT ?a WHERE { ?a property:P688 resource:Q21123684 . ?a rdf:type ontology:Q863908 }
Protein-arginine deiminase type-1
action filter_type
action find_reverse
entity Protein-arginine deiminase type-1
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Protein-arginine deiminase type-1']
SELECT DISTINCT ?a WHERE { ?a property:encodes resource:Protein-arginine_deiminase_type-1 . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18039717
SYSTEM
PADI1
Q18039717
(c(Q863908),P688,Q21123684)
action filter_type
action find_reverse
entity Q21123684
relation P688
type Q863908
The nucleic acid sequence that is encoded by Protein-arginine deiminase type-1 is called [ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q21123684']
SELECT DISTINCT ?a WHERE { ?a property:P688 resource:Q21123684 . ?a rdf:type ontology:Q863908 }
PADI1
The nucleic acid sequence that is encoded by Protein-arginine deiminase type-1 is called PADI1
PADI1
action filter_type
action find_reverse
entity Protein-arginine deiminase type-1
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Protein-arginine deiminase type-1']
SELECT DISTINCT ?a WHERE { ?a property:encodes resource:Protein-arginine_deiminase_type-1 . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18039717
P684
Q863908
USER
Which nucleic acid sequence is that one an orthlogous gene of ?
(c(Q863908),P684,Q18039717)
action filter_type
action find
entity Q18039717
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18039717']
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q863908 . resource:Q18039717 property:P684 ?m }
PADI1
action filter_type
action find
entity PADI1
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'PADI1']
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:nucleic_acid_sequence . resource:PADI1 property:ortholog ?m }
[]
nucleic acid sequence
Q18252957
SYSTEM
Padi1
Q18252957
(c(Q863908),P684,Q18039717)
action filter_type
action find
entity Q18039717
relation P684
type Q863908
[ANSWER] is that one an orthlogous gene of
[{'concept': 'Q863908'}, 'P684', 'Q18039717']
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q863908 . resource:Q18039717 property:P684 ?m }
Padi1
Padi1 is that one an orthlogous gene of
Padi1
action filter_type
action find
entity PADI1
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'PADI1']
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:nucleic_acid_sequence . resource:PADI1 property:ortholog ?m }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q79899 Q18039717
P702 P681
Q181394
USER
Which nutrients are encoded by PADI1 and have cytoplasm as their cell component ?
AND((c(Q181394),P702,Q18039717), (c(Q181394),P681,Q79899))
action filter_type
action intersection
action find_reverse
entity Q18039717
relation P702
action find_reverse
entity Q79899
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q18039717'], [{'concept': 'Q181394'}, 'P681', 'Q79899']]}
SELECT DISTINCT ?f WHERE { ?f property:P702 resource:Q18039717 . ?f property:P681 resource:Q79899 . ?f rdf:type ontology:Q181394 }
cytoplasm PADI1
action filter_type
action intersection
action find_reverse
entity PADI1
relation encoded by
action find_reverse
entity cytoplasm
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'PADI1'], [{'concept': 'nutrient'}, 'cell component', 'cytoplasm']]}
SELECT DISTINCT ?f WHERE { ?f property:encoded_by resource:PADI1 . ?f property:cell_component resource:cytoplasm . ?f rdf:type ontology:nutrient }
[]
nutrient
Q21123684
SYSTEM
Protein-arginine deiminase type-1
Q21123684
AND((c(Q181394),P702,Q18039717), (c(Q181394),P681,Q79899))
action filter_type
action intersection
action find_reverse
entity Q18039717
relation P702
action find_reverse
entity Q79899
relation P681
type Q181394
[ANSWER] is encoded by PADI1 and have cytoplasm as their cell component
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q18039717'], [{'concept': 'Q181394'}, 'P681', 'Q79899']]}
SELECT DISTINCT ?f WHERE { ?f property:P702 resource:Q18039717 . ?f property:P681 resource:Q79899 . ?f rdf:type ontology:Q181394 }
Protein-arginine deiminase type-1
Protein-arginine deiminase type-1 is encoded by PADI1 and have cytoplasm as their cell component
Protein-arginine deiminase type-1
action filter_type
action intersection
action find_reverse
entity PADI1
relation encoded by
action find_reverse
entity cytoplasm
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'PADI1'], [{'concept': 'nutrient'}, 'cell component', 'cytoplasm']]}
SELECT DISTINCT ?f WHERE { ?f property:encoded_by resource:PADI1 . ?f property:cell_component resource:cytoplasm . ?f rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23325699 Q18039717
P688
Q181394
USER
Which nutrients are encoded by PADI1 or type III secretion system target, YopB family    DVUA0110 ?
OR((Q18039717,P688,c(Q181394)), (Q23325699,P688,c(Q181394)))
action filter_type
action union
action find
entity Q18039717
relation P688
action find
entity Q23325699
relation P688
type Q181394
{'OR': [['Q18039717', 'P688', {'concept': 'Q181394'}], ['Q23325699', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?j WHERE { { { resource:Q18039717 property:P688 ?j } UNION { resource:Q23325699 property:P688 ?j } } . ?j rdf:type ontology:Q181394 }
type III secretion system target, YopB family    DVUA0110 PADI1
action filter_type
action union
action find
entity PADI1
relation encodes
action find
entity type III secretion system target, YopB family    DVUA0110
relation encodes
type nutrient
{'OR': [['PADI1', 'encodes', {'concept': 'nutrient'}], ['type III secretion system target, YopB family    DVUA0110', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?j WHERE { { { resource:PADI1 property:encodes ?j } UNION { resource:type_III_secretion_system_target,_YopB_family____DVUA0110 property:encodes ?j } } . ?j rdf:type ontology:nutrient }
[]
nutrient
Q21123684 Q23463692
SYSTEM
Protein-arginine deiminase type-1, type III secretion system target, YopB family    DVUA0110
Q21123684 Q23463692
OR((Q18039717,P688,c(Q181394)), (Q23325699,P688,c(Q181394)))
action filter_type
action union
action find
entity Q18039717
relation P688
action find
entity Q23325699
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q18039717', 'P688', {'concept': 'Q181394'}], ['Q23325699', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?j WHERE { { { resource:Q18039717 property:P688 ?j } UNION { resource:Q23325699 property:P688 ?j } } . ?j rdf:type ontology:Q181394 }
Protein-arginine deiminase type-1 type III secretion system target, YopB family    DVUA0110
Protein-arginine deiminase type-1 and type III secretion system target, YopB family DVUA0110 are encoded by PADI1 or type III secretion system target, YopB family DVUA0110
Protein-arginine deiminase type-1 type III secretion system target, YopB family    DVUA0110
action filter_type
action union
action find
entity PADI1
relation encodes
action find
entity type III secretion system target, YopB family    DVUA0110
relation encodes
type nutrient
{'OR': [['PADI1', 'encodes', {'concept': 'nutrient'}], ['type III secretion system target, YopB family    DVUA0110', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?j WHERE { { { resource:PADI1 property:encodes ?j } UNION { resource:type_III_secretion_system_target,_YopB_family____DVUA0110 property:encodes ?j } } . ?j rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P129
Q181394 Q79529 Q181394
USER
Which nutrients do max number of chemical substances or nutrients contact with ?
(c(Q79529)|c(Q181394),P129,c(Q181394))
action argmax
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ( MAX ( ?f ) AS ?g ) { SELECT DISTINCT ( COUNT ( ?w ) AS ?f ) ?s WHERE { { ?w property:P129 ?s . ?s rdf:type ontology:Q181394 . ?w rdf:type ontology:Q79529 } UNION { ?w property:P129 ?s . ?s rdf:type ontology:Q181394 . ?w rdf:type ontology:Q181394 } } GROUP BY ?s } } . { SELECT DISTINCT ( COUNT ( ?j ) AS ?h ) ?u WHERE { ?j rdf:type ?x . VALUES ( ?x ) { ( ontology:Q79529 ) ( ontology:Q181394 ) } } GROUP BY ?u } . FILTER ( ?h = ?g ) }
action argmax
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ( MAX ( ?f ) AS ?g ) { SELECT DISTINCT ( COUNT ( ?w ) AS ?f ) ?s WHERE { { ?w property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?w rdf:type ontology:chemical_substance } UNION { ?w property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?w rdf:type ontology:nutrient } } GROUP BY ?s } } . { SELECT DISTINCT ( COUNT ( ?j ) AS ?h ) ?u WHERE { ?j rdf:type ?x . VALUES ( ?x ) { ( ontology:chemical_substance ) ( ontology:nutrient ) } } GROUP BY ?u } . FILTER ( ?h = ?g ) }
[]
nutrient chemical substance nutrient
Q1949517
SYSTEM
5-hydroxytryptamine receptor 2A
Q1949517
(c(Q79529)|c(Q181394),P129,c(Q181394))
action argmax
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
Receptor [ANSWER] max number of chemical substances or nutrients contact with
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ( MAX ( ?f ) AS ?g ) { SELECT DISTINCT ( COUNT ( ?w ) AS ?f ) ?s WHERE { { ?w property:P129 ?s . ?s rdf:type ontology:Q181394 . ?w rdf:type ontology:Q79529 } UNION { ?w property:P129 ?s . ?s rdf:type ontology:Q181394 . ?w rdf:type ontology:Q181394 } } GROUP BY ?s } } . { SELECT DISTINCT ( COUNT ( ?j ) AS ?h ) ?u WHERE { ?j rdf:type ?x . VALUES ( ?x ) { ( ontology:Q79529 ) ( ontology:Q181394 ) } } GROUP BY ?u } . FILTER ( ?h = ?g ) }
5-hydroxytryptamine receptor 2A
Receptor 5-hydroxytryptamine receptor 2A max number of chemical substances or nutrients contact with
5-hydroxytryptamine receptor 2A
action argmax
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?u WHERE { { SELECT DISTINCT ( MAX ( ?f ) AS ?g ) { SELECT DISTINCT ( COUNT ( ?w ) AS ?f ) ?s WHERE { { ?w property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?w rdf:type ontology:chemical_substance } UNION { ?w property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?w rdf:type ontology:nutrient } } GROUP BY ?s } } . { SELECT DISTINCT ( COUNT ( ?j ) AS ?h ) ?u WHERE { ?j rdf:type ?x . VALUES ( ?x ) { ( ontology:chemical_substance ) ( ontology:nutrient ) } } GROUP BY ?u } . FILTER ( ?h = ?g ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18252957
P703
Q16521
USER
Where is Padi1 found ?
(Q18252957,P703,c(Q16521))
action filter_type
action find
entity Q18252957
relation P703
type Q16521
['Q18252957', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?d WHERE { resource:Q18252957 property:P703 ?d . ?d rdf:type ontology:Q16521 }
Padi1
action filter_type
action find
entity Padi1
relation found in taxon
type taxon
['Padi1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?d WHERE { resource:Padi1 property:found_in_taxon ?d . ?d rdf:type ontology:taxon }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
(Q18252957,P703,c(Q16521))
action filter_type
action find
entity Q18252957
relation P703
type Q16521
Padi1 is found in [ANSWER]
['Q18252957', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?d WHERE { resource:Q18252957 property:P703 ?d . ?d rdf:type ontology:Q16521 }
Mus musculus
Padi1 is found in Mus musculus
Mus musculus
action filter_type
action find
entity Padi1
relation found in taxon
type taxon
['Padi1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?d WHERE { resource:Padi1 property:found_in_taxon ?d . ?d rdf:type ontology:taxon }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q10354103 Q1949517
P769 P129
Q8386
USER
Which drugs communicates with 5-hydroxytryptamine receptor 2A and do probucol significantly interact with ?
AND((c(Q8386),P129,Q1949517), (c(Q8386),P769,Q10354103))
action filter_type
action intersection
action find_reverse
entity Q1949517
relation P129
action find_reverse
entity Q10354103
relation P769
type Q8386
{'AND': [[{'concept': 'Q8386'}, 'P129', 'Q1949517'], [{'concept': 'Q8386'}, 'P769', 'Q10354103']]}
SELECT DISTINCT ?b WHERE { ?b property:P769 resource:Q10354103 . ?b property:P129 resource:Q1949517 . ?b rdf:type ontology:Q8386 }
probucol 5-hydroxytryptamine receptor 2A
action filter_type
action intersection
action find_reverse
entity 5-hydroxytryptamine receptor 2A
relation physically interacts with
action find_reverse
entity probucol
relation significant drug interaction
type drug
{'AND': [[{'concept': 'drug'}, 'physically interacts with', '5-hydroxytryptamine receptor 2A'], [{'concept': 'drug'}, 'significant drug interaction', 'probucol']]}
SELECT DISTINCT ?b WHERE { ?b property:significant_drug_interaction resource:probucol . ?b property:physically_interacts_with resource:5-hydroxytryptamine_receptor_2A . ?b rdf:type ontology:drug }
[]
drug
Q407972 Q58375 Q144085 Q6821618 Q251347
SYSTEM
chlorpromazine, thioridazine, pimozide, mesoridazine, haloperidol
Q407972 Q58375 Q144085 Q6821618 Q251347
AND((c(Q8386),P129,Q1949517), (c(Q8386),P769,Q10354103))
action filter_type
action intersection
action find_reverse
entity Q1949517
relation P129
action find_reverse
entity Q10354103
relation P769
type Q8386
[ANSWERS] communicate with 5-hydroxytryptamine receptor 2A and do probucol significantly interact with
{'AND': [[{'concept': 'Q8386'}, 'P129', 'Q1949517'], [{'concept': 'Q8386'}, 'P769', 'Q10354103']]}
SELECT DISTINCT ?b WHERE { ?b property:P769 resource:Q10354103 . ?b property:P129 resource:Q1949517 . ?b rdf:type ontology:Q8386 }
chlorpromazine thioridazine pimozide mesoridazine haloperidol
Chlorpromazine, thioridazine, pimozide, mesoridazine and haloperidol communicate with 5-hydroxytryptamine receptor 2A and do probucol significantly interact with
chlorpromazine thioridazine pimozide mesoridazine haloperidol
action filter_type
action intersection
action find_reverse
entity 5-hydroxytryptamine receptor 2A
relation physically interacts with
action find_reverse
entity probucol
relation significant drug interaction
type drug
{'AND': [[{'concept': 'drug'}, 'physically interacts with', '5-hydroxytryptamine receptor 2A'], [{'concept': 'drug'}, 'significant drug interaction', 'probucol']]}
SELECT DISTINCT ?b WHERE { ?b property:significant_drug_interaction resource:probucol . ?b property:physically_interacts_with resource:5-hydroxytryptamine_receptor_2A . ?b rdf:type ontology:drug }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q3791612
P769
Q8386
USER
Do those ones have a significant interaction with ibutilide ?
(Q3791612,P769,Q407972) (Q3791612,P769,Q58375) (Q3791612,P769,Q144085) (Q3791612,P769,Q6821618) (Q3791612,P769,Q251347)
action is_in
entity prev_answer
action find
entity Q3791612
relation P769
['Q3791612', 'P769', 'Q407972'] ['Q3791612', 'P769', 'Q58375'] ['Q3791612', 'P769', 'Q144085'] ['Q3791612', 'P769', 'Q6821618'] ['Q3791612', 'P769', 'Q251347']
ASK WHERE { resource:Q3791612 property:P769 ?v . VALUES ( ?v ) { ( resource:Q407972 ) ( resource:Q58375 ) ( resource:Q144085 ) } }
ibutilide
action is_in
entity prev_answer
action find
entity ibutilide
relation significant drug interaction
['ibutilide', 'significant drug interaction', 'chlorpromazine'] ['ibutilide', 'significant drug interaction', 'thioridazine'] ['ibutilide', 'significant drug interaction', 'pimozide'] ['ibutilide', 'significant drug interaction', 'mesoridazine'] ['ibutilide', 'significant drug interaction', 'haloperidol']
ASK WHERE { resource:ibutilide property:significant_drug_interaction ?v . VALUES ( ?v ) { ( resource:chlorpromazine ) ( resource:thioridazine ) ( resource:pimozide ) } }
[]
drug
SYSTEM
YES
(Q3791612,P769,Q407972) (Q3791612,P769,Q58375) (Q3791612,P769,Q144085) (Q3791612,P769,Q6821618) (Q3791612,P769,Q251347)
action is_in
entity prev_answer
action find
entity Q3791612
relation P769
[ANSWER]
['Q3791612', 'P769', 'Q407972'] ['Q3791612', 'P769', 'Q58375'] ['Q3791612', 'P769', 'Q144085'] ['Q3791612', 'P769', 'Q6821618'] ['Q3791612', 'P769', 'Q251347']
ASK WHERE { resource:Q3791612 property:P769 ?v . VALUES ( ?v ) { ( resource:Q407972 ) ( resource:Q58375 ) ( resource:Q144085 ) } }
Yes
action is_in
entity prev_answer
action find
entity ibutilide
relation significant drug interaction
['ibutilide', 'significant drug interaction', 'chlorpromazine'] ['ibutilide', 'significant drug interaction', 'thioridazine'] ['ibutilide', 'significant drug interaction', 'pimozide'] ['ibutilide', 'significant drug interaction', 'mesoridazine'] ['ibutilide', 'significant drug interaction', 'haloperidol']
ASK WHERE { resource:ibutilide property:significant_drug_interaction ?v . VALUES ( ?v ) { ( resource:chlorpromazine ) ( resource:thioridazine ) ( resource:pimozide ) } }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q18252957 Q21987823
P688
Q181394
USER
Is Protein-arginine deiminase type-1 encoded by Padi1 ?
(Q18252957,P688,Q21987823)
action is_in
entity Q21987823
action find
entity Q18252957
relation P688
['Q18252957', 'P688', 'Q21987823']
ASK WHERE { resource:Q18252957 property:P688 resource:Q21987823 }
Padi1 Protein-arginine deiminase type-1
action is_in
entity Protein-arginine deiminase type-1
action find
entity Padi1
relation encodes
['Padi1', 'encodes', 'Protein-arginine deiminase type-1']
ASK WHERE { resource:Padi1 property:encodes resource:Protein-arginine_deiminase_type-1 }
[]
nutrient
SYSTEM
YES
(Q18252957,P688,Q21987823)
action is_in
entity Q21987823
action find
entity Q18252957
relation P688
[ANSWER]
['Q18252957', 'P688', 'Q21987823']
ASK WHERE { resource:Q18252957 property:P688 resource:Q21987823 }
Yes
action is_in
entity Protein-arginine deiminase type-1
action find
entity Padi1
relation encodes
['Padi1', 'encodes', 'Protein-arginine deiminase type-1']
ASK WHERE { resource:Padi1 property:encodes resource:Protein-arginine_deiminase_type-1 }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q14820643 Q251347
P680 P129
Q181394
USER
Which nutrients communicates with haloperidol and have the molecular function signal transducer activity ?
AND((c(Q181394),P129,Q251347), (c(Q181394),P680,Q14820643))
action filter_type
action intersection
action find_reverse
entity Q251347
relation P129
action find_reverse
entity Q14820643
relation P680
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P129', 'Q251347'], [{'concept': 'Q181394'}, 'P680', 'Q14820643']]}
SELECT DISTINCT ?u WHERE { ?u property:P680 resource:Q14820643 . ?u property:P129 resource:Q251347 . ?u rdf:type ontology:Q181394 }
signal transducer activity haloperidol
action filter_type
action intersection
action find_reverse
entity haloperidol
relation physically interacts with
action find_reverse
entity signal transducer activity
relation molecular function
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'physically interacts with', 'haloperidol'], [{'concept': 'nutrient'}, 'molecular function', 'signal transducer activity']]}
SELECT DISTINCT ?u WHERE { ?u property:molecular_function resource:signal_transducer_activity . ?u property:physically_interacts_with resource:haloperidol . ?u rdf:type ontology:nutrient }
[]
nutrient
Q2034004 Q21115046 Q21109355 Q21110867 Q21497939 Q308856 Q21131500 Q309513 Q4639596 Q21110872
SYSTEM
Some of them are D(2) dopamine receptor, 5-hydroxytryptamine receptor 1D, 5-hydroxytryptamine receptor 7, D(1A) dopamine receptor, 5-hydroxytryptamine receptor 7, D(4) dopamine receptor, D(1B) dopamine receptor, Histamine H1 receptor, 5-hydroxytryptamine receptor 2B, D(3) dopamine receptor
Q21497939 Q4639596 Q1949517 Q21110867 Q308856 Q21110872 Q21109355 Q21115046 Q2034004 Q21115043 Q309513 Q21131500
AND((c(Q181394),P129,Q251347), (c(Q181394),P680,Q14820643))
action filter_type
action intersection
action find_reverse
entity Q251347
relation P129
action find_reverse
entity Q14820643
relation P680
type Q181394
[ANSWERS] communicate with haloperidol and have the molecular function signal transducer activity
{'AND': [[{'concept': 'Q181394'}, 'P129', 'Q251347'], [{'concept': 'Q181394'}, 'P680', 'Q14820643']]}
SELECT DISTINCT ?u WHERE { ?u property:P680 resource:Q14820643 . ?u property:P129 resource:Q251347 . ?u rdf:type ontology:Q181394 }
5-hydroxytryptamine receptor 7 5-hydroxytryptamine receptor 2B 5-hydroxytryptamine receptor 2A D(1A) dopamine receptor D(4) dopamine receptor D(3) dopamine receptor 5-hydroxytryptamine receptor 7 5-hydroxytryptamine receptor 1D D(2) dopamine receptor 5-hydroxytryptamine receptor 1A Histamine H1 receptor D(1B) dopamine receptor
D(2) dopamine receptor, 5-hydroxytryptamine receptor 1D, 5-hydroxytryptamine receptor 7, D(1A) dopamine receptor, 5-hydroxytryptamine receptor 7, D(4) dopamine receptor, D(1B) dopamine receptor, Histamine H1 receptor, 5-hydroxytryptamine receptor 2B and D(3) dopamine receptor communicate with haloperidol and have the molecular function signal transducer activity
D(2) dopamine receptor 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 7 D(1A) dopamine receptor 5-hydroxytryptamine receptor 7 D(4) dopamine receptor D(1B) dopamine receptor Histamine H1 receptor 5-hydroxytryptamine receptor 2B D(3) dopamine receptor
action filter_type
action intersection
action find_reverse
entity haloperidol
relation physically interacts with
action find_reverse
entity signal transducer activity
relation molecular function
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'physically interacts with', 'haloperidol'], [{'concept': 'nutrient'}, 'molecular function', 'signal transducer activity']]}
SELECT DISTINCT ?u WHERE { ?u property:molecular_function resource:signal_transducer_activity . ?u property:physically_interacts_with resource:haloperidol . ?u rdf:type ontology:nutrient }
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Clarification
Quantitative|Count|Single entity type|Indirect
P129
Q8386
USER
How many drugs do that nutrient interact with ?
(Q21497939,P129,c(Q8386))
['Q21497939', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q21497939 property:P129 ?z . ?z rdf:type ontology:Q8386 }
['5-hydroxytryptamine receptor 7', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:5-hydroxytryptamine_receptor_7 property:physically_interacts_with ?z . ?z rdf:type ontology:drug }
[]
drug
Quantitative|Count|Single entity type|Clarification
Q21131500
SYSTEM
Did you mean D(1B) dopamine receptor ?
(Q2034004,P129,c(Q8386)) (Q21115046,P129,c(Q8386)) (Q21109355,P129,c(Q8386)) (Q21110867,P129,c(Q8386)) (Q21497939,P129,c(Q8386)) (Q308856,P129,c(Q8386)) (Q21131500,P129,c(Q8386)) (Q309513,P129,c(Q8386)) (Q4639596,P129,c(Q8386)) (Q21110872,P129,c(Q8386))
[ANSWER]
['Q2034004', 'P129', {'concept': 'Q8386'}] ['Q21115046', 'P129', {'concept': 'Q8386'}] ['Q21109355', 'P129', {'concept': 'Q8386'}] ['Q21110867', 'P129', {'concept': 'Q8386'}] ['Q21497939', 'P129', {'concept': 'Q8386'}] ['Q308856', 'P129', {'concept': 'Q8386'}] ['Q21131500', 'P129', {'concept': 'Q8386'}] ['Q309513', 'P129', {'concept': 'Q8386'}] ['Q4639596', 'P129', {'concept': 'Q8386'}] ['Q21110872', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q21497939 property:P129 ?z . ?z rdf:type ontology:Q8386 }
Did you mean D(1B) dopamine receptor ?
D(1B) dopamine receptor
['D(2) dopamine receptor', 'physically interacts with', {'concept': 'drug'}] ['5-hydroxytryptamine receptor 1D', 'physically interacts with', {'concept': 'drug'}] ['5-hydroxytryptamine receptor 7', 'physically interacts with', {'concept': 'drug'}] ['D(1A) dopamine receptor', 'physically interacts with', {'concept': 'drug'}] ['5-hydroxytryptamine receptor 7', 'physically interacts with', {'concept': 'drug'}] ['D(4) dopamine receptor', 'physically interacts with', {'concept': 'drug'}] ['D(1B) dopamine receptor', 'physically interacts with', {'concept': 'drug'}] ['Histamine H1 receptor', 'physically interacts with', {'concept': 'drug'}] ['5-hydroxytryptamine receptor 2B', 'physically interacts with', {'concept': 'drug'}] ['D(3) dopamine receptor', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:5-hydroxytryptamine_receptor_7 property:physically_interacts_with ?z . ?z rdf:type ontology:drug }
[]
Quantitative Reasoning (Count) (All)
USER
No, I meant 5-hydroxytryptamine receptor 7. Could you tell me the answer for that?
(Q21497939,P129,c(Q8386))
Q21497939
['Q21497939', 'P129', {'concept': 'Q8386'}]
['5-hydroxytryptamine receptor 7', 'physically interacts with', {'concept': 'drug'}]
[]
SYSTEM
9
Q424442 Q407972 Q412194 Q416701 Q6824154 Q419186 Q251347 Q58397 Q221361
(Q21497939,P129,c(Q8386))
[ANSWER]
['Q21497939', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q21497939 property:P129 ?z . ?z rdf:type ontology:Q8386 }
methysergide chlorpromazine buspirone mianserin methiothepin ergotamine haloperidol amitriptyline clozapine
9
['5-hydroxytryptamine receptor 7', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:5-hydroxytryptamine_receptor_7 property:physically_interacts_with ?z . ?z rdf:type ontology:drug }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q309513
P682
Q2200417
USER
Which cognition is Histamine H1 receptor involved in ?
(Q309513,P682,c(Q2200417))
action filter_type
action find
entity Q309513
relation P682
type Q2200417
['Q309513', 'P682', {'concept': 'Q2200417'}]
SELECT DISTINCT ?t WHERE { resource:Q309513 property:P682 ?t . ?t rdf:type ontology:Q2200417 }
Histamine H1 receptor
action filter_type
action find
entity Histamine H1 receptor
relation biological process
type cognition
['Histamine H1 receptor', 'biological process', {'concept': 'cognition'}]
SELECT DISTINCT ?t WHERE { resource:Histamine_H1_receptor property:biological_process ?t . ?t rdf:type ontology:cognition }
[]
cognition
Q492
SYSTEM
memory
Q492
(Q309513,P682,c(Q2200417))
action filter_type
action find
entity Q309513
relation P682
type Q2200417
Which cognition is Histamine H1 receptor involved in
['Q309513', 'P682', {'concept': 'Q2200417'}]
SELECT DISTINCT ?t WHERE { resource:Q309513 property:P682 ?t . ?t rdf:type ontology:Q2200417 }
memory
Which cognition is Histamine H1 receptor involved in
memory
action filter_type
action find
entity Histamine H1 receptor
relation biological process
type cognition
['Histamine H1 receptor', 'biological process', {'concept': 'cognition'}]
SELECT DISTINCT ?t WHERE { resource:Histamine_H1_receptor property:biological_process ?t . ?t rdf:type ontology:cognition }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q492
P366
Q3249551
USER
Which process has its main utilization as that cognition ?
(c(Q3249551),P366,Q492)
action filter_type
action find_reverse
entity Q492
relation P366
type Q3249551
[{'concept': 'Q3249551'}, 'P366', 'Q492']
SELECT DISTINCT ?w WHERE { ?w property:P366 resource:Q492 . ?w rdf:type ontology:Q3249551 }
memory
action filter_type
action find_reverse
entity memory
relation use
type process
[{'concept': 'process'}, 'use', 'memory']
SELECT DISTINCT ?w WHERE { ?w property:use resource:memory . ?w rdf:type ontology:process }
[]
process
Q13461032
SYSTEM
mnemotechnic
Q13461032
(c(Q3249551),P366,Q492)
action filter_type
action find_reverse
entity Q492
relation P366
type Q3249551
[ANSWER] has its main utilization as that cognition
[{'concept': 'Q3249551'}, 'P366', 'Q492']
SELECT DISTINCT ?w WHERE { ?w property:P366 resource:Q492 . ?w rdf:type ontology:Q3249551 }
mnemotechnic
Mnemotechnic has its main utilization as that cognition
mnemotechnic
action filter_type
action find_reverse
entity memory
relation use
type process
[{'concept': 'process'}, 'use', 'memory']
SELECT DISTINCT ?w WHERE { ?w property:use resource:memory . ?w rdf:type ontology:process }
[]