Simple Question (Direct)
Simple Question
Q21122435
P129
Q79529
USER
Which chemical substances do Orexin receptor type 2 communicate with ?
(Q21122435,P129,c(Q79529))
action filter_type
action find
entity Q21122435
relation P129
type Q79529
['Q21122435', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ?a WHERE { resource:Q21122435 property:P129 ?a . ?a rdf:type ontology:Q79529 }
Orexin receptor type 2
action filter_type
action find
entity Orexin receptor type 2
relation physically interacts with
type chemical substance
['Orexin receptor type 2', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ?a WHERE { resource:Orexin_receptor_type_2 property:physically_interacts_with ?a . ?a rdf:type ontology:chemical_substance }
[]
chemical substance
Q4355941 Q7388914 Q18355303
SYSTEM
almorexant, SB-649868, filorexant
Q4355941 Q5323607 Q7388914 Q18355303 Q7388911 Q12747053
(Q21122435,P129,c(Q79529))
action filter_type
action find
entity Q21122435
relation P129
type Q79529
[ANSWERS] Orexin receptor type 2 communicate with
['Q21122435', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ?a WHERE { resource:Q21122435 property:P129 ?a . ?a rdf:type ontology:Q79529 }
almorexant EMPA SB-649868 filorexant SB-334867 TCS-OX2-29
Almorexant, SB-649868 and filorexant Orexin receptor type 2 communicate with
almorexant SB-649868 filorexant
action filter_type
action find
entity Orexin receptor type 2
relation physically interacts with
type chemical substance
['Orexin receptor type 2', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ?a WHERE { resource:Orexin_receptor_type_2 property:physically_interacts_with ?a . ?a rdf:type ontology:chemical_substance }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q4355941 Q7388914 Q18355303
P129
Q181394
USER
What do almorexant, SB-649868 and filorexant interact with ?
(Q4355941,P129,c(Q181394)) (Q7388914,P129,c(Q181394)) (Q18355303,P129,c(Q181394))
action union
action filter_type
action find
entity Q4355941
relation P129
type Q181394
action filter_type
action find
entity Q7388914
relation P129
type Q181394
action filter_type
action find
entity Q18355303
relation P129
type Q181394
['Q4355941', 'P129', {'concept': 'Q181394'}] ['Q7388914', 'P129', {'concept': 'Q181394'}] ['Q18355303', 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { ?m property:P129 ?t . VALUES ( ?m ) { ( resource:Q4355941 ) ( resource:Q7388914 ) } }
almorexant SB-649868 filorexant
action union
action filter_type
action find
entity almorexant
relation physically interacts with
type nutrient
action filter_type
action find
entity SB-649868
relation physically interacts with
type nutrient
action filter_type
action find
entity filorexant
relation physically interacts with
type nutrient
['almorexant', 'physically interacts with', {'concept': 'nutrient'}] ['SB-649868', 'physically interacts with', {'concept': 'nutrient'}] ['filorexant', 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { ?m property:physically_interacts_with ?t . VALUES ( ?m ) { ( resource:almorexant ) ( resource:SB-649868 ) } }
[]
nutrient
Q21122435 Q21122435 Q21122435
SYSTEM
Orexin receptor type 2
Q21122433 Q21122435 Q21122433 Q21122435 Q21122433 Q21122435
(Q4355941,P129,c(Q181394)) (Q7388914,P129,c(Q181394)) (Q18355303,P129,c(Q181394))
action union
action filter_type
action find
entity Q4355941
relation P129
type Q181394
action filter_type
action find
entity Q7388914
relation P129
type Q181394
action filter_type
action find
entity Q18355303
relation P129
type Q181394
Almorexant , SB -649868 and filorexant interact with [ANSWER], [ANSWER] and [ANSWER]
['Q4355941', 'P129', {'concept': 'Q181394'}] ['Q7388914', 'P129', {'concept': 'Q181394'}] ['Q18355303', 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { ?m property:P129 ?t . VALUES ( ?m ) { ( resource:Q4355941 ) ( resource:Q7388914 ) } }
Orexin receptor type 1 Orexin receptor type 2 Orexin receptor type 1 Orexin receptor type 2 Orexin receptor type 1 Orexin receptor type 2
Almorexant , SB -649868 and filorexant interact with Orexin receptor type 2, Orexin receptor type 2 and Orexin receptor type 2
Orexin receptor type 2 Orexin receptor type 2 Orexin receptor type 2
action union
action filter_type
action find
entity almorexant
relation physically interacts with
type nutrient
action filter_type
action find
entity SB-649868
relation physically interacts with
type nutrient
action filter_type
action find
entity filorexant
relation physically interacts with
type nutrient
['almorexant', 'physically interacts with', {'concept': 'nutrient'}] ['SB-649868', 'physically interacts with', {'concept': 'nutrient'}] ['filorexant', 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { ?m property:physically_interacts_with ?t . VALUES ( ?m ) { ( resource:almorexant ) ( resource:SB-649868 ) } }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21122435
P703
Q16521
USER
Which taxon is that nutrient found in ?
(Q21122435,P703,c(Q16521)) (Q21122435,P703,c(Q16521)) (Q21122435,P703,c(Q16521))
action filter_type
action find
entity Q21122435
relation P703
type Q16521
['Q21122435', 'P703', {'concept': 'Q16521'}] ['Q21122435', 'P703', {'concept': 'Q16521'}] ['Q21122435', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:Q16521 . resource:Q21122435 property:P703 ?f }
Orexin receptor type 2
action filter_type
action find
entity Orexin receptor type 2
relation found in taxon
type taxon
['Orexin receptor type 2', 'found in taxon', {'concept': 'taxon'}] ['Orexin receptor type 2', 'found in taxon', {'concept': 'taxon'}] ['Orexin receptor type 2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:taxon . resource:Orexin_receptor_type_2 property:found_in_taxon ?f }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21122435,P703,c(Q16521)) (Q21122435,P703,c(Q16521)) (Q21122435,P703,c(Q16521))
action filter_type
action find
entity Q21122435
relation P703
type Q16521
That nutrient is found in [ANSWER]
['Q21122435', 'P703', {'concept': 'Q16521'}] ['Q21122435', 'P703', {'concept': 'Q16521'}] ['Q21122435', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:Q16521 . resource:Q21122435 property:P703 ?f }
Homo sapiens
That nutrient is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Orexin receptor type 2
relation found in taxon
type taxon
['Orexin receptor type 2', 'found in taxon', {'concept': 'taxon'}] ['Orexin receptor type 2', 'found in taxon', {'concept': 'taxon'}] ['Orexin receptor type 2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:taxon . resource:Orexin_receptor_type_2 property:found_in_taxon ?f }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P129
Q181394 Q181394 Q8386
USER
Which nutrients do max number of nutrients and drugs interact with ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action argmax
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?c WHERE { { SELECT DISTINCT ( MAX ( ?j ) AS ?e ) { SELECT DISTINCT ?h ( COUNT ( ?o ) AS ?j ) WHERE { ?o rdf:type ?i . VALUES ( ?i ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } GROUP BY ?h } } . FILTER ( ?f = ?e ) . { SELECT DISTINCT ?c ( COUNT ( ?t ) AS ?f ) WHERE { { ?t property:P129 ?c . ?c rdf:type ontology:Q181394 . ?t rdf:type ontology:Q8386 } UNION { ?t property:P129 ?c . ?c rdf:type ontology:Q181394 . ?t rdf:type ontology:Q181394 } } GROUP BY ?c } }
action argmax
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?c WHERE { { SELECT DISTINCT ( MAX ( ?j ) AS ?e ) { SELECT DISTINCT ?h ( COUNT ( ?o ) AS ?j ) WHERE { ?o rdf:type ?i . VALUES ( ?i ) { ( ontology:nutrient ) ( ontology:drug ) } } GROUP BY ?h } } . FILTER ( ?f = ?e ) . { SELECT DISTINCT ?c ( COUNT ( ?t ) AS ?f ) WHERE { { ?t property:physically_interacts_with ?c . ?c rdf:type ontology:nutrient . ?t rdf:type ontology:drug } UNION { ?t property:physically_interacts_with ?c . ?c rdf:type ontology:nutrient . ?t rdf:type ontology:nutrient } } GROUP BY ?c } }
[]
nutrient nutrient drug
Q1949517
SYSTEM
5-hydroxytryptamine receptor 2A
Q1949517
(c(Q181394)|c(Q8386),P129,c(Q181394))
action argmax
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
Max number of nutrients and drugs interact with [ANSWER]
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?c WHERE { { SELECT DISTINCT ( MAX ( ?j ) AS ?e ) { SELECT DISTINCT ?h ( COUNT ( ?o ) AS ?j ) WHERE { ?o rdf:type ?i . VALUES ( ?i ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } GROUP BY ?h } } . FILTER ( ?f = ?e ) . { SELECT DISTINCT ?c ( COUNT ( ?t ) AS ?f ) WHERE { { ?t property:P129 ?c . ?c rdf:type ontology:Q181394 . ?t rdf:type ontology:Q8386 } UNION { ?t property:P129 ?c . ?c rdf:type ontology:Q181394 . ?t rdf:type ontology:Q181394 } } GROUP BY ?c } }
5-hydroxytryptamine receptor 2A
Max number of nutrients and drugs interact with 5-hydroxytryptamine receptor 2A
5-hydroxytryptamine receptor 2A
action argmax
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?c WHERE { { SELECT DISTINCT ( MAX ( ?j ) AS ?e ) { SELECT DISTINCT ?h ( COUNT ( ?o ) AS ?j ) WHERE { ?o rdf:type ?i . VALUES ( ?i ) { ( ontology:nutrient ) ( ontology:drug ) } } GROUP BY ?h } } . FILTER ( ?f = ?e ) . { SELECT DISTINCT ?c ( COUNT ( ?t ) AS ?f ) WHERE { { ?t property:physically_interacts_with ?c . ?c rdf:type ontology:nutrient . ?t rdf:type ontology:drug } UNION { ?t property:physically_interacts_with ?c . ?c rdf:type ontology:nutrient . ?t rdf:type ontology:nutrient } } GROUP BY ?c } }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q1949517 Q27253876
P129
Q79529
USER
Does that nutrient interact with (3-phenylpropyl)sulfamic acid ?
(Q1949517,P129,Q27253876)
action is_in
entity Q27253876
action find
entity Q1949517
relation P129
['Q1949517', 'P129', 'Q27253876']
ASK WHERE { resource:Q1949517 property:P129 resource:Q27253876 }
5-hydroxytryptamine receptor 2A (3-phenylpropyl)sulfamic acid
action is_in
entity (3-phenylpropyl)sulfamic acid
action find
entity 5-hydroxytryptamine receptor 2A
relation physically interacts with
['5-hydroxytryptamine receptor 2A', 'physically interacts with', '(3-phenylpropyl)sulfamic acid']
ASK WHERE { resource:5-hydroxytryptamine_receptor_2A property:physically_interacts_with resource:(3-phenylpropyl)sulfamic_acid }
[]
chemical substance
SYSTEM
NO
(Q1949517,P129,Q27253876)
action is_in
entity Q27253876
action find
entity Q1949517
relation P129
[ANSWER]
['Q1949517', 'P129', 'Q27253876']
ASK WHERE { resource:Q1949517 property:P129 resource:Q27253876 }
No
action is_in
entity (3-phenylpropyl)sulfamic acid
action find
entity 5-hydroxytryptamine receptor 2A
relation physically interacts with
['5-hydroxytryptamine receptor 2A', 'physically interacts with', '(3-phenylpropyl)sulfamic acid']
ASK WHERE { resource:5-hydroxytryptamine_receptor_2A property:physically_interacts_with resource:(3-phenylpropyl)sulfamic_acid }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q21122435 Q18026854 Q23336641
P702
Q863908
USER
Is Orexin receptor type 2 encoded by HCRTR2 and heat shock protein    tll0280 ?
(Q21122435,P702,Q18026854) (Q21122435,P702,Q23336641)
action is_in
entity Q21122435
action intersection
action find_reverse
entity Q18026854
relation P702
action find_reverse
entity Q23336641
relation P702
['Q21122435', 'P702', 'Q18026854'] ['Q21122435', 'P702', 'Q23336641']
ASK WHERE { resource:Q21122435 property:P702 resource:Q18026854 . resource:Q21122435 property:P702 resource:Q23336641 }
Orexin receptor type 2 HCRTR2 heat shock protein    tll0280
action is_in
entity Orexin receptor type 2
action intersection
action find_reverse
entity HCRTR2
relation encoded by
action find_reverse
entity heat shock protein    tll0280
relation encoded by
['Orexin receptor type 2', 'encoded by', 'HCRTR2'] ['Orexin receptor type 2', 'encoded by', 'heat shock protein    tll0280']
ASK WHERE { resource:Orexin_receptor_type_2 property:encoded_by resource:HCRTR2 . resource:Orexin_receptor_type_2 property:encoded_by resource:heat_shock_protein____tll0280 }
[]
nucleic acid sequence
SYSTEM
YES and NO respectively
(Q21122435,P702,Q18026854) (Q21122435,P702,Q23336641)
action is_in
entity Q21122435
action intersection
action find_reverse
entity Q18026854
relation P702
action find_reverse
entity Q23336641
relation P702
[ANSWER]
['Q21122435', 'P702', 'Q18026854'] ['Q21122435', 'P702', 'Q23336641']
ASK WHERE { resource:Q21122435 property:P702 resource:Q18026854 . resource:Q21122435 property:P702 resource:Q23336641 }
YES and NO respectively
action is_in
entity Orexin receptor type 2
action intersection
action find_reverse
entity HCRTR2
relation encoded by
action find_reverse
entity heat shock protein    tll0280
relation encoded by
['Orexin receptor type 2', 'encoded by', 'HCRTR2'] ['Orexin receptor type 2', 'encoded by', 'heat shock protein    tll0280']
ASK WHERE { resource:Orexin_receptor_type_2 property:encoded_by resource:HCRTR2 . resource:Orexin_receptor_type_2 property:encoded_by resource:heat_shock_protein____tll0280 }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Single entity type
P682
Q2996394 Q181394
USER
Which biological processes are a biological processes that min number of nutrients are involved in ?
(c(Q181394),P682,Q21114820)
action argmin
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
[{'concept': 'Q181394'}, 'P682', 'Q21114820']
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ( MIN ( ?g ) AS ?i ) { SELECT DISTINCT ?p ( COUNT ( ?t ) AS ?g ) WHERE { ?t property:P682 ?p . ?p rdf:type ontology:Q2996394 . ?t rdf:type ontology:Q181394 } GROUP BY ?p } } . FILTER ( ?c = ?i ) . { SELECT DISTINCT ?s ( COUNT ( ?a ) AS ?c ) WHERE { ?a property:P682 ?s . ?a rdf:type ontology:Q181394 . ?s rdf:type ontology:Q2996394 } GROUP BY ?s } }
action argmin
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', 'spermatid nucleus elongation']
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ( MIN ( ?g ) AS ?i ) { SELECT DISTINCT ?p ( COUNT ( ?t ) AS ?g ) WHERE { ?t property:biological_process ?p . ?p rdf:type ontology:biological_process . ?t rdf:type ontology:nutrient } GROUP BY ?p } } . FILTER ( ?c = ?i ) . { SELECT DISTINCT ?s ( COUNT ( ?a ) AS ?c ) WHERE { ?a property:biological_process ?s . ?a rdf:type ontology:nutrient . ?s rdf:type ontology:biological_process } GROUP BY ?s } }
[]
biological process nutrient
Q22271492 Q14864899 Q15325345
SYSTEM
detoxification of zinc ion, acrosome matrix dispersal, pronuclear fusion
Q22271492 Q14864899 Q22294349 Q15325345 Q24459941 Q21438150 Q22253821 Q21127160 Q21171796 Q22271501 Q22281166 Q14908045 Q22271697 Q17304930 Q22279704 Q22269699 Q22274350
(c(Q181394),P682,Q21114820)
action argmin
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
[ANSWERS] are a biological processes that min number of nutrients are involved in
[{'concept': 'Q181394'}, 'P682', 'Q21114820']
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ( MIN ( ?g ) AS ?i ) { SELECT DISTINCT ?p ( COUNT ( ?t ) AS ?g ) WHERE { ?t property:P682 ?p . ?p rdf:type ontology:Q2996394 . ?t rdf:type ontology:Q181394 } GROUP BY ?p } } . FILTER ( ?c = ?i ) . { SELECT DISTINCT ?s ( COUNT ( ?a ) AS ?c ) WHERE { ?a property:P682 ?s . ?a rdf:type ontology:Q181394 . ?s rdf:type ontology:Q2996394 } GROUP BY ?s } }
detoxification of zinc ion acrosome matrix dispersal dormancy process pronuclear fusion manchette assembly protein activation cascade regulation of transcription involved in meiotic cell cycle fertilization, exchange of chromosomal proteins nitric oxide storage multi-organism cellular process gene conversion at mating-type locus, DNA double-strand break formation menstrual cycle phase activation of immune response cell cycle process gene conversion at mating-type locus, DNA repair synthesis growth involved in symbiotic interaction phenotypic switching
Detoxification of zinc ion, acrosome matrix dispersal and pronuclear fusion are a biological processes that min number of nutrients are involved in
detoxification of zinc ion acrosome matrix dispersal pronuclear fusion
action argmin
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', 'spermatid nucleus elongation']
SELECT DISTINCT ?s WHERE { { SELECT DISTINCT ( MIN ( ?g ) AS ?i ) { SELECT DISTINCT ?p ( COUNT ( ?t ) AS ?g ) WHERE { ?t property:biological_process ?p . ?p rdf:type ontology:biological_process . ?t rdf:type ontology:nutrient } GROUP BY ?p } } . FILTER ( ?c = ?i ) . { SELECT DISTINCT ?s ( COUNT ( ?a ) AS ?c ) WHERE { ?a property:biological_process ?s . ?a rdf:type ontology:nutrient . ?s rdf:type ontology:biological_process } GROUP BY ?s } }
[]