Simple Question (Direct)
Simple Question
Q14911544
P702
Q863908
USER
What is the gene that encodes Early endosome antigen 1 ?
(Q14911544,P702,c(Q863908))
action filter_type
action find
entity Q14911544
relation P702
type Q863908
['Q14911544', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?j WHERE { resource:Q14911544 property:P702 ?j . ?j rdf:type ontology:Q863908 }
Early endosome antigen 1
action filter_type
action find
entity Early endosome antigen 1
relation encoded by
type nucleic acid sequence
['Early endosome antigen 1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?j WHERE { resource:Early_endosome_antigen_1 property:encoded_by ?j . ?j rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q14911543
SYSTEM
Eea1
Q14911543
(Q14911544,P702,c(Q863908))
action filter_type
action find
entity Q14911544
relation P702
type Q863908
The gene that encodes Early endosome antigen 1 is named [ANSWER]
['Q14911544', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?j WHERE { resource:Q14911544 property:P702 ?j . ?j rdf:type ontology:Q863908 }
Eea1
The gene that encodes Early endosome antigen 1 is named Eea1
Eea1
action filter_type
action find
entity Early endosome antigen 1
relation encoded by
type nucleic acid sequence
['Early endosome antigen 1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?j WHERE { resource:Early_endosome_antigen_1 property:encoded_by ?j . ?j rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q14911544
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q14911543)
action filter_type
action find_reverse
entity Q14911544
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q14911543']
SELECT DISTINCT ?c WHERE { ?c property:P688 resource:Q14911544 . ?c rdf:type ontology:Q863908 }
Early endosome antigen 1
action filter_type
action find_reverse
entity Early endosome antigen 1
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Eea1']
SELECT DISTINCT ?c WHERE { ?c property:encodes resource:Early_endosome_antigen_1 . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q14911543
SYSTEM
Eea1
Q14911543
(c(Q863908),P688,Q14911543)
action filter_type
action find_reverse
entity Q14911544
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q14911543']
SELECT DISTINCT ?c WHERE { ?c property:P688 resource:Q14911544 . ?c rdf:type ontology:Q863908 }
Eea1
Eea1 encodes that nutrient
Eea1
action filter_type
action find_reverse
entity Early endosome antigen 1
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Eea1']
SELECT DISTINCT ?c WHERE { ?c property:encodes resource:Early_endosome_antigen_1 . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23431234 Q14911544
P680
Q44424
USER
Which chemical bonds represent molecular function of Early endosome antigen 1 or DNA primase    AHA_0834 ?
OR((Q14911544,P680,c(Q44424)), (Q23431234,P680,c(Q44424)))
action filter_type
action union
action find
entity Q14911544
relation P680
action find
entity Q23431234
relation P680
type Q44424
{'OR': [['Q14911544', 'P680', {'concept': 'Q44424'}], ['Q23431234', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q44424 . { { resource:Q14911544 property:P680 ?i } UNION { resource:Q23431234 property:P680 ?i } } }
DNA primase    AHA_0834 Early endosome antigen 1
action filter_type
action union
action find
entity Early endosome antigen 1
relation molecular function
action find
entity DNA primase    AHA_0834
relation molecular function
type chemical bond
{'OR': [['Early endosome antigen 1', 'molecular function', {'concept': 'chemical bond'}], ['DNA primase    AHA_0834', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:chemical_bond . { { resource:Early_endosome_antigen_1 property:molecular_function ?i } UNION { resource:DNA_primase____AHA_0834 property:molecular_function ?i } } }
[]
chemical bond
Q14633865 Q13667380 Q14860850
SYSTEM
zinc ion binding, metal ion binding, magnesium ion binding
Q14633865 Q13667380 Q14860850
OR((Q14911544,P680,c(Q44424)), (Q23431234,P680,c(Q44424)))
action filter_type
action union
action find
entity Q14911544
relation P680
action find
entity Q23431234
relation P680
type Q44424
[ANSWERS] represent molecular function of Early endosome antigen 1 or DNA primase AHA_0834
{'OR': [['Q14911544', 'P680', {'concept': 'Q44424'}], ['Q23431234', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q44424 . { { resource:Q14911544 property:P680 ?i } UNION { resource:Q23431234 property:P680 ?i } } }
zinc ion binding metal ion binding magnesium ion binding
Zinc ion binding, metal ion binding and magnesium ion binding represent molecular function of Early endosome antigen 1 or DNA primase AHA_0834
zinc ion binding metal ion binding magnesium ion binding
action filter_type
action union
action find
entity Early endosome antigen 1
relation molecular function
action find
entity DNA primase    AHA_0834
relation molecular function
type chemical bond
{'OR': [['Early endosome antigen 1', 'molecular function', {'concept': 'chemical bond'}], ['DNA primase    AHA_0834', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:chemical_bond . { { resource:Early_endosome_antigen_1 property:molecular_function ?i } UNION { resource:DNA_primase____AHA_0834 property:molecular_function ?i } } }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q24138656
P680
Q181394
USER
Do CPZ-55 prophage; uncharacterized protein    b2446 have molecular function as those chemical bonds ?
(Q24138656,P680,Q14633865) (Q24138656,P680,Q13667380) (Q24138656,P680,Q14860850)
action is_in
entity prev_answer
action find
entity Q24138656
relation P680
['Q24138656', 'P680', 'Q14633865'] ['Q24138656', 'P680', 'Q13667380'] ['Q24138656', 'P680', 'Q14860850']
ASK WHERE { resource:Q24138656 property:P680 ?x . VALUES ( ?x ) { ( resource:Q14633865 ) ( resource:Q13667380 ) ( resource:Q14860850 ) } }
CPZ-55 prophage; uncharacterized protein    b2446
action is_in
entity prev_answer
action find
entity CPZ-55 prophage; uncharacterized protein    b2446
relation molecular function
['CPZ-55 prophage; uncharacterized protein    b2446', 'molecular function', 'zinc ion binding'] ['CPZ-55 prophage; uncharacterized protein    b2446', 'molecular function', 'metal ion binding'] ['CPZ-55 prophage; uncharacterized protein    b2446', 'molecular function', 'magnesium ion binding']
ASK WHERE { resource:CPZ-55_prophage;_uncharacterized_protein____b2446 property:molecular_function ?x . VALUES ( ?x ) { ( resource:zinc_ion_binding ) ( resource:metal_ion_binding ) ( resource:magnesium_ion_binding ) } }
[]
nutrient
SYSTEM
NO
(Q24138656,P680,Q14633865) (Q24138656,P680,Q13667380) (Q24138656,P680,Q14860850)
action is_in
entity prev_answer
action find
entity Q24138656
relation P680
[ANSWER]
['Q24138656', 'P680', 'Q14633865'] ['Q24138656', 'P680', 'Q13667380'] ['Q24138656', 'P680', 'Q14860850']
ASK WHERE { resource:Q24138656 property:P680 ?x . VALUES ( ?x ) { ( resource:Q14633865 ) ( resource:Q13667380 ) ( resource:Q14860850 ) } }
No
action is_in
entity prev_answer
action find
entity CPZ-55 prophage; uncharacterized protein    b2446
relation molecular function
['CPZ-55 prophage; uncharacterized protein    b2446', 'molecular function', 'zinc ion binding'] ['CPZ-55 prophage; uncharacterized protein    b2446', 'molecular function', 'metal ion binding'] ['CPZ-55 prophage; uncharacterized protein    b2446', 'molecular function', 'magnesium ion binding']
ASK WHERE { resource:CPZ-55_prophage;_uncharacterized_protein____b2446 property:molecular_function ?x . VALUES ( ?x ) { ( resource:zinc_ion_binding ) ( resource:metal_ion_binding ) ( resource:magnesium_ion_binding ) } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q14911543
P684
Q863908
USER
What is the name of the species that has Eea1 as its orthologous gene ?
(c(Q863908),P684,Q14911543)
action filter_type
action find
entity Q14911543
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q14911543']
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q863908 . resource:Q14911543 property:P684 ?c }
Eea1
action filter_type
action find
entity Eea1
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Eea1']
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:nucleic_acid_sequence . resource:Eea1 property:ortholog ?c }
[]
nucleic acid sequence
Q14911542
SYSTEM
EEA1
Q14911542
(c(Q863908),P684,Q14911543)
action filter_type
action find
entity Q14911543
relation P684
type Q863908
The name of the species that has Eea1 as its orthologous gene is the [ANSWER]
[{'concept': 'Q863908'}, 'P684', 'Q14911543']
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q863908 . resource:Q14911543 property:P684 ?c }
EEA1
The name of the species that has Eea1 as its orthologous gene is the EEA1
EEA1
action filter_type
action find
entity Eea1
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Eea1']
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:nucleic_acid_sequence . resource:Eea1 property:ortholog ?c }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q14911542
P703
Q16521
USER
Which taxon is that nucleic acid sequence found in ?
(Q14911542,P703,c(Q16521))
action filter_type
action find
entity Q14911542
relation P703
type Q16521
['Q14911542', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?s WHERE { resource:Q14911542 property:P703 ?s . ?s rdf:type ontology:Q16521 }
EEA1
action filter_type
action find
entity EEA1
relation found in taxon
type taxon
['EEA1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?s WHERE { resource:EEA1 property:found_in_taxon ?s . ?s rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q14911542,P703,c(Q16521))
action filter_type
action find
entity Q14911542
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
['Q14911542', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?s WHERE { resource:Q14911542 property:P703 ?s . ?s rdf:type ontology:Q16521 }
Homo sapiens
That nucleic acid sequence is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity EEA1
relation found in taxon
type taxon
['EEA1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?s WHERE { resource:EEA1 property:found_in_taxon ?s . ?s rdf:type ontology:taxon }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P566
Q82799 Q16521
USER
How many names are a basionyms of exactly 2 taxons ?
(c(Q16521),P566,c(Q82799))
action count
action equal
action find_reverse_tuple_counts
relation P566
type Q82799
type Q16521
value 2
[{'concept': 'Q16521'}, 'P566', {'concept': 'Q82799'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?i ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?k ) AS ?f ) WHERE { ?k property:P566 ?j . ?k rdf:type ontology:Q16521 . ?j rdf:type ontology:Q82799 } GROUP BY ?j } . FILTER ( ?f = 2 ) }
action count
action equal
action find_reverse_tuple_counts
relation basionym
type name
type taxon
value 2
[{'concept': 'taxon'}, 'basionym', {'concept': 'name'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?i ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?k ) AS ?f ) WHERE { ?k property:basionym ?j . ?k rdf:type ontology:taxon . ?j rdf:type ontology:name } GROUP BY ?j } . FILTER ( ?f = 2 ) }
[]
name taxon
SYSTEM
2
Q11079289 Q17244388
(c(Q16521),P566,c(Q82799))
action count
action equal
action find_reverse_tuple_counts
relation P566
type Q82799
type Q16521
value 2
[ANSWER]
[{'concept': 'Q16521'}, 'P566', {'concept': 'Q82799'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?i ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?k ) AS ?f ) WHERE { ?k property:P566 ?j . ?k rdf:type ontology:Q16521 . ?j rdf:type ontology:Q82799 } GROUP BY ?j } . FILTER ( ?f = 2 ) }
Salsola brachiata Atriplex portulacoides
2
action count
action equal
action find_reverse_tuple_counts
relation basionym
type name
type taxon
value 2
[{'concept': 'taxon'}, 'basionym', {'concept': 'name'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?i ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?k ) AS ?f ) WHERE { ?k property:basionym ?j . ?k rdf:type ontology:taxon . ?j rdf:type ontology:name } GROUP BY ?j } . FILTER ( ?f = 2 ) }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P180
Q16521 Q3305213 Q15709879
USER
Which taxons are depicted in atleast 4 paintings or artwork series ?
(c(Q3305213)|c(Q15709879),P180,c(Q16521))
action atleast
action union
action find_reverse_tuple_counts
relation P180
type Q16521
type Q3305213
action find_reverse_tuple_counts
relation P180
type Q16521
type Q15709879
value 4
[[{'concept': 'Q3305213'}, {'concept': 'Q15709879'}], 'P180', {'concept': 'Q16521'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?e ) ?d WHERE { ?a rdf:type ?n . VALUES ( ?n ) { ( ontology:Q15709879 ) ( ontology:Q3305213 ) } } GROUP BY ?d } . FILTER ( ?e >= 4 ) }
action atleast
action union
action find_reverse_tuple_counts
relation depicts
type taxon
type painting
action find_reverse_tuple_counts
relation depicts
type taxon
type artwork series
value 4
[[{'concept': 'painting'}, {'concept': 'artwork series'}], 'depicts', {'concept': 'taxon'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?e ) ?d WHERE { ?a rdf:type ?n . VALUES ( ?n ) { ( ontology:artwork_series ) ( ontology:painting ) } } GROUP BY ?d } . FILTER ( ?e >= 4 ) }
[]
taxon painting artwork series
Q756 Q5113 Q2102
SYSTEM
plant, bird, snake
Q756 Q5113 Q2102
(c(Q3305213)|c(Q15709879),P180,c(Q16521))
action atleast
action union
action find_reverse_tuple_counts
relation P180
type Q16521
type Q3305213
action find_reverse_tuple_counts
relation P180
type Q16521
type Q15709879
value 4
[ANSWERS] are depicted in atleast 4 paintings or artwork series
[[{'concept': 'Q3305213'}, {'concept': 'Q15709879'}], 'P180', {'concept': 'Q16521'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?e ) ?d WHERE { ?a rdf:type ?n . VALUES ( ?n ) { ( ontology:Q15709879 ) ( ontology:Q3305213 ) } } GROUP BY ?d } . FILTER ( ?e >= 4 ) }
plant bird snake
Plant, bird and snake are depicted in atleast 4 paintings or artwork series
plant bird snake
action atleast
action union
action find_reverse_tuple_counts
relation depicts
type taxon
type painting
action find_reverse_tuple_counts
relation depicts
type taxon
type artwork series
value 4
[[{'concept': 'painting'}, {'concept': 'artwork series'}], 'depicts', {'concept': 'taxon'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?e ) ?d WHERE { ?a rdf:type ?n . VALUES ( ?n ) { ( ontology:artwork_series ) ( ontology:painting ) } } GROUP BY ?d } . FILTER ( ?e >= 4 ) }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q7169506
P129
Q79529 Q181394 Q181394
USER
Which nutrients can communicate with greater number of chemical substances and nutrients than Peroxisome proliferator-activated receptor alpha ?
(c(Q181394),P129,c(Q79529)|c(Q181394))
action greater
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find
entity Q7169506
relation P129
type Q79529
type Q181394
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?j ) AS ?c ) WHERE { resource:Q7169506 property:P129 ?j . { VALUES ( ?d ) { ( ontology:Q79529 ) ( ontology:Q181394 ) } . ?j rdf:type ?d } } } . FILTER ( ?i > ?c ) . { SELECT DISTINCT ( COUNT ( ?s ) AS ?i ) ?t WHERE { { ?t property:P129 ?s . ?t rdf:type ontology:Q181394 . ?s rdf:type ontology:Q79529 } UNION { ?t property:P129 ?s . ?s rdf:type ontology:Q181394 . ?t rdf:type ontology:Q181394 } } GROUP BY ?t } }
Peroxisome proliferator-activated receptor alpha
action greater
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find
entity Peroxisome proliferator-activated receptor alpha
relation physically interacts with
type chemical substance
type nutrient
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?j ) AS ?c ) WHERE { resource:Peroxisome_proliferator-activated_receptor_alpha property:physically_interacts_with ?j . { VALUES ( ?d ) { ( ontology:chemical_substance ) ( ontology:nutrient ) } . ?j rdf:type ?d } } } . FILTER ( ?i > ?c ) . { SELECT DISTINCT ( COUNT ( ?s ) AS ?i ) ?t WHERE { { ?t property:physically_interacts_with ?s . ?t rdf:type ontology:nutrient . ?s rdf:type ontology:chemical_substance } UNION { ?t property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?t rdf:type ontology:nutrient } } GROUP BY ?t } }
[]
chemical substance nutrient nutrient
Q2034004 Q424401 Q1949517
SYSTEM
D(2) dopamine receptor, Epidermal growth factor receptor, 5-hydroxytryptamine receptor 2A
Q21115605 Q21110942 Q21116154 Q14872770 Q309513 Q21173427 Q308856 Q12746346 Q21108695 Q4847910 Q21123087 Q413209 Q21154358 Q5123372 Q21113310 Q21113313 Q21108624 Q288797 Q21172390 Q1486720 Q4789588 Q4789584 Q4789587 Q287958 Q5500227 Q1084878 Q6589868 Q21123083 Q14900999 Q7671479 Q21109365 Q15323278 Q21110867 Q21103155 Q21122995 Q4847900 Q4847907 Q7671495 Q4639596 Q416601 Q5512777 Q4734884 Q4734887 Q4734886 Q21988386 Q21173381 Q21497941 Q21126779 Q21126777 Q21116162 Q21116164 Q2844056 Q21120420 Q5773155 Q5500222 Q21115334 Q21118353 Q4822491 Q21173406 Q411978 Q288382 Q4859538 Q21115051 Q21115052 Q909409 Q21109355 Q21115954 Q4734894 Q21110872 Q4734892 Q21114578 Q3454525 Q21108118 Q4734891 Q21114576 Q21118072 Q21131500 Q5500223 Q21132004 Q21991520 Q6590408 Q21132652 Q6594119 Q21122493 Q7671468 Q7673856 Q21118862 Q21115961 Q21115962 Q21115965 Q8083989 Q311568 Q5773160 Q6590443 Q21122997 Q3062781 Q12746120 Q11071075 Q5629167 Q21115815 Q21115816 Q21115819 Q288395 Q21108125 Q21115046 Q21115043 Q415271 Q7834290 Q21114585 Q21114582 Q21497939 Q21497937 Q21122433 Q21122435 Q424401 Q5009781 Q21119822 Q21173206 Q21174141 Q21130911 Q21150595 Q15324694 Q21201294 Q7671477 Q1949517 Q21110922 Q21113292 Q21498666 Q21109363 Q21109359 Q21983336 Q6589190 Q15324415 Q5520260 Q2034004
(c(Q181394),P129,c(Q79529)|c(Q181394))
action greater
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q181394
action count
action filter_multi_types
action find
entity Q7169506
relation P129
type Q79529
type Q181394
[ANSWERS] can communicate with greater number of chemical substances and nutrients than Peroxisome proliferator-activated receptor alpha
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?j ) AS ?c ) WHERE { resource:Q7169506 property:P129 ?j . { VALUES ( ?d ) { ( ontology:Q79529 ) ( ontology:Q181394 ) } . ?j rdf:type ?d } } } . FILTER ( ?i > ?c ) . { SELECT DISTINCT ( COUNT ( ?s ) AS ?i ) ?t WHERE { { ?t property:P129 ?s . ?t rdf:type ontology:Q181394 . ?s rdf:type ontology:Q79529 } UNION { ?t property:P129 ?s . ?s rdf:type ontology:Q181394 . ?t rdf:type ontology:Q181394 } } GROUP BY ?t } }
Vascular endothelial growth factor receptor 1 G-protein coupled receptor 55 Adenosine receptor A3 Histamine H4 receptor Histamine H1 receptor Histone deacetylase 9 D(4) dopamine receptor Nociceptin receptor G-protein coupled receptor 84 Muscarinic acetylcholine receptor M2 Neuromedin-K receptor Transient receptor potential cation channel subfamily V member 1 Histone deacetylase 3 Mu-type opioid receptor Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit rho-2 Platelet-derived growth factor receptor beta 5-hydroxytryptamine receptor 1B Vascular endothelial growth factor receptor 2 Glutamate receptor 3 Vasopressin V2 receptor Vasopressin V1a receptor Vasopressin V1b receptor Beta-1 adrenergic receptor Free fatty acid receptor 3 Peroxisome proliferator-activated receptor gamma Metabotropic glutamate receptor 6 Substance-K receptor Kappa-type opioid receptor Transient receptor potential cation channel subfamily M member 3 5-hydroxytryptamine receptor 4 Transient receptor potential cation channel subfamily A member 1 D(1A) dopamine receptor Glycine receptor subunit alpha-1 Melatonin receptor type 1A Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 Transient receptor potential cation channel subfamily M member 8 5-hydroxytryptamine receptor 2B Androgen receptor Gamma-aminobutyric acid receptor subunit alpha-4 Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor Alpha-1B adrenergic receptor Delta-type opioid receptor Histone deacetylase 6 5-hydroxytryptamine receptor 4 P2Y purinoceptor 4 P2Y purinoceptor 2 Adenosine receptor A2a Adenosine receptor A2b Muscarinic acetylcholine receptor M3 Prostaglandin E2 receptor EP1 subtype Histone deacetylase 2 Free fatty acid receptor 1 Delta-type opioid receptor Vascular endothelial growth factor receptor 3 Aurora kinase B Histone deacetylase 8 Thromboxane A2 receptor Histamine H4 receptor Metabotropic glutamate receptor 2 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 1F Mast/stem cell growth factor receptor Kit 5-hydroxytryptamine receptor 7 Glycine receptor subunit alpha-2 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-3 Progesterone receptor 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-5 Steroid hormone receptor ERR1 D(1B) dopamine receptor Free fatty acid receptor 2 Endothelin-1 receptor Trace amine-associated receptor 1 Metabotropic glutamate receptor 8 Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Prostaglandin F2-alpha receptor Short transient receptor potential channel 5 Substance-P receptor Glutamate receptor ionotropic, NMDA 1 Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Kappa-type opioid receptor Histamine H2 receptor Histone deacetylase 5 Oxytocin receptor Melatonin receptor type 1B Adenosine receptor A1 Muscarinic acetylcholine receptor M5 Trace amine-associated receptor 1 Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Histamine H3 receptor 5-hydroxytryptamine receptor 3A 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A Receptor tyrosine-protein kinase erbB-2 Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-6 Gamma-aminobutyric acid receptor subunit alpha-2 5-hydroxytryptamine receptor 7 5-hydroxytryptamine receptor 5A Orexin receptor type 1 Orexin receptor type 2 Epidermal growth factor receptor Receptor-type tyrosine-protein kinase FLT3 Inward rectifier potassium channel 4 Histone deacetylase 4 Prostaglandin D2 receptor 2 Glutamate receptor ionotropic, NMDA 2D Cannabinoid receptor 2 Transient receptor potential cation channel subfamily V member 3 Cannabinoid receptor 1 Transient receptor potential cation channel subfamily M member 2 5-hydroxytryptamine receptor 2A N-arachidonyl glycine receptor Gamma-aminobutyric acid receptor subunit rho-3 5-hydroxytryptamine receptor 1B 5-hydroxytryptamine receptor 6 5-hydroxytryptamine receptor 5A Histamine H3 receptor Metabotropic glutamate receptor 5 Transient receptor potential cation channel subfamily M member 8 Gamma-aminobutyric acid receptor subunit alpha-1 D(2) dopamine receptor
D(2) dopamine receptor, Epidermal growth factor receptor and 5-hydroxytryptamine receptor 2A can communicate with greater number of chemical substances and nutrients than Peroxisome proliferator-activated receptor alpha
D(2) dopamine receptor Epidermal growth factor receptor 5-hydroxytryptamine receptor 2A
action greater
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action count
action filter_multi_types
action find
entity Peroxisome proliferator-activated receptor alpha
relation physically interacts with
type chemical substance
type nutrient
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?j ) AS ?c ) WHERE { resource:Peroxisome_proliferator-activated_receptor_alpha property:physically_interacts_with ?j . { VALUES ( ?d ) { ( ontology:chemical_substance ) ( ontology:nutrient ) } . ?j rdf:type ?d } } } . FILTER ( ?i > ?c ) . { SELECT DISTINCT ( COUNT ( ?s ) AS ?i ) ?t WHERE { { ?t property:physically_interacts_with ?s . ?t rdf:type ontology:nutrient . ?s rdf:type ontology:chemical_substance } UNION { ?t property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?t rdf:type ontology:nutrient } } GROUP BY ?t } }
[]
Clarification
Simple Question|Single Entity|Indirect
Q1949517
P681
Q15989253
USER
Which parts are components of that nutrient ?
(Q1949517,P681,c(Q15989253))
action filter_type
action find
entity Q1949517
relation P681
type Q15989253
['Q1949517', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?r WHERE { resource:Q1949517 property:P681 ?r . ?r rdf:type ontology:Q15989253 }
5-hydroxytryptamine receptor 2A
action filter_type
action find
entity 5-hydroxytryptamine receptor 2A
relation cell component
type part
['5-hydroxytryptamine receptor 2A', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?r WHERE { resource:5-hydroxytryptamine_receptor_2A property:cell_component ?r . ?r rdf:type ontology:part }
[]
part
Clarification for simple ques.
Q424401
SYSTEM
Did you mean Epidermal growth factor receptor ?
Q2034004 Q424401 Q1949517
(Q2034004,P681,c(Q15989253)) (Q424401,P681,c(Q15989253)) (Q1949517,P681,c(Q15989253))
[ANSWER]
['Q2034004', 'P681', {'concept': 'Q15989253'}] ['Q424401', 'P681', {'concept': 'Q15989253'}] ['Q1949517', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?r WHERE { resource:Q1949517 property:P681 ?r . ?r rdf:type ontology:Q15989253 }
D(2) dopamine receptor Epidermal growth factor receptor 5-hydroxytryptamine receptor 2A
Did you mean Epidermal growth factor receptor ?
Epidermal growth factor receptor
['D(2) dopamine receptor', 'cell component', {'concept': 'part'}] ['Epidermal growth factor receptor', 'cell component', {'concept': 'part'}] ['5-hydroxytryptamine receptor 2A', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?r WHERE { resource:5-hydroxytryptamine_receptor_2A property:cell_component ?r . ?r rdf:type ontology:part }
[]
Simple Question (Coreferenced)
USER
No, I meant 5-hydroxytryptamine receptor 2A. Could you tell me the answer for that?
(Q1949517,P681,c(Q15989253))
Q1949517
['Q1949517', 'P681', {'concept': 'Q15989253'}]
['5-hydroxytryptamine receptor 2A', 'cell component', {'concept': 'part'}]
[]
Q79899 Q14349455
SYSTEM
cytoplasm, membrane
Q79899 Q14349455
(Q1949517,P681,c(Q15989253))
action filter_type
action find
entity Q1949517
relation P681
type Q15989253
The [ANSWERS] are components of that nutrient
['Q1949517', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?r WHERE { resource:Q1949517 property:P681 ?r . ?r rdf:type ontology:Q15989253 }
cytoplasm membrane
The cytoplasm and membrane are components of that nutrient
cytoplasm membrane
action filter_type
action find
entity 5-hydroxytryptamine receptor 2A
relation cell component
type part
['5-hydroxytryptamine receptor 2A', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?r WHERE { resource:5-hydroxytryptamine_receptor_2A property:cell_component ?r . ?r rdf:type ontology:part }
[]
Clarification
Simple Question|Single Entity|Indirect
Q79899
P361
Q20011319
USER
What is a component of that part ?
(c(Q20011319),P361,Q79899)
action filter_type
action find_reverse
entity Q79899
relation P361
type Q20011319
[{'concept': 'Q20011319'}, 'P361', 'Q79899']
SELECT DISTINCT ?l WHERE { ?l property:P361 resource:Q79899 . ?l rdf:type ontology:Q20011319 }
cytoplasm
action filter_type
action find_reverse
entity cytoplasm
relation part of
type part of a plant
[{'concept': 'part of a plant'}, 'part of', 'cytoplasm']
SELECT DISTINCT ?l WHERE { ?l property:part_of resource:cytoplasm . ?l rdf:type ontology:part_of_a_plant }
[]
part of a plant
Clarification for simple ques.
Q79899
SYSTEM
Did you mean cytoplasm ?
Q79899 Q14349455
(c(Q20011319),P361,Q79899) (c(Q20011319),P361,Q14349455)
[ANSWER]
[{'concept': 'Q20011319'}, 'P361', 'Q79899'] [{'concept': 'Q20011319'}, 'P361', 'Q14349455']
SELECT DISTINCT ?l WHERE { ?l property:P361 resource:Q79899 . ?l rdf:type ontology:Q20011319 }
cytoplasm membrane
Did you mean cytoplasm ?
cytoplasm
[{'concept': 'part of a plant'}, 'part of', 'cytoplasm'] [{'concept': 'part of a plant'}, 'part of', 'membrane']
SELECT DISTINCT ?l WHERE { ?l property:part_of resource:cytoplasm . ?l rdf:type ontology:part_of_a_plant }
[]
Simple Question (Coreferenced)
USER
Yes
(c(Q20011319),P361,Q79899)
[{'concept': 'Q20011319'}, 'P361', 'Q79899']
[{'concept': 'part of a plant'}, 'part of', 'cytoplasm']
[]
Q22329458
SYSTEM
cytoplasmic region
Q22329458
(c(Q20011319),P361,Q79899)
action filter_type
action find_reverse
entity Q79899
relation P361
type Q20011319
A component of that part is a [ANSWER]
[{'concept': 'Q20011319'}, 'P361', 'Q79899']
SELECT DISTINCT ?l WHERE { ?l property:P361 resource:Q79899 . ?l rdf:type ontology:Q20011319 }
cytoplasmic region
A component of that part is a cytoplasmic region
cytoplasmic region
action filter_type
action find_reverse
entity cytoplasm
relation part of
type part of a plant
[{'concept': 'part of a plant'}, 'part of', 'cytoplasm']
SELECT DISTINCT ?l WHERE { ?l property:part_of resource:cytoplasm . ?l rdf:type ontology:part_of_a_plant }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q22329458
P361
Q15989253
USER
What is that part of a plant a portion of ?
(Q22329458,P361,c(Q15989253))
action filter_type
action find
entity Q22329458
relation P361
type Q15989253
['Q22329458', 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { resource:Q22329458 property:P361 ?h . ?h rdf:type ontology:Q15989253 }
cytoplasmic region
action filter_type
action find
entity cytoplasmic region
relation part of
type part
['cytoplasmic region', 'part of', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { resource:cytoplasmic_region property:part_of ?h . ?h rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q22329458,P361,c(Q15989253))
action filter_type
action find
entity Q22329458
relation P361
type Q15989253
That part of a plant a portion of is a [ANSWER]
['Q22329458', 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { resource:Q22329458 property:P361 ?h . ?h rdf:type ontology:Q15989253 }
cytoplasm
That part of a plant a portion of is a cytoplasm
cytoplasm
action filter_type
action find
entity cytoplasmic region
relation part of
type part
['cytoplasmic region', 'part of', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { resource:cytoplasmic_region property:part_of ?h . ?h rdf:type ontology:part }
[]