Simple Question (Direct)
Simple Question
Q23493835
P702
Q863908
USER
What encodes ornithine carbamoyltransferase    SAG2165 ?
(Q23493835,P702,c(Q863908))
action filter_type
action find
entity Q23493835
relation P702
type Q863908
['Q23493835', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q23493835 property:P702 ?c . ?c rdf:type ontology:Q863908 }
ornithine carbamoyltransferase    SAG2165
action filter_type
action find
entity ornithine carbamoyltransferase    SAG2165
relation encoded by
type nucleic acid sequence
['ornithine carbamoyltransferase    SAG2165', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:ornithine_carbamoyltransferase____SAG2165 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23225650
SYSTEM
ornithine carbamoyltransferase    SAG2165
Q23225650
(Q23493835,P702,c(Q863908))
action filter_type
action find
entity Q23493835
relation P702
type Q863908
Ornithine carbamoyltransferase SAG2165 encodes ornithine carbamoyltransferase SAG2165
['Q23493835', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q23493835 property:P702 ?c . ?c rdf:type ontology:Q863908 }
ornithine carbamoyltransferase    SAG2165
Ornithine carbamoyltransferase SAG2165 encodes ornithine carbamoyltransferase SAG2165
ornithine carbamoyltransferase    SAG2165
action filter_type
action find
entity ornithine carbamoyltransferase    SAG2165
relation encoded by
type nucleic acid sequence
['ornithine carbamoyltransferase    SAG2165', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:ornithine_carbamoyltransferase____SAG2165 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23493835
P681
Q15989253
USER
Which part is a component of ornithine carbamoyltransferase    SAG2165 ?
(Q23493835,P681,c(Q15989253))
action filter_type
action find
entity Q23493835
relation P681
type Q15989253
['Q23493835', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?t WHERE { resource:Q23493835 property:P681 ?t . ?t rdf:type ontology:Q15989253 }
ornithine carbamoyltransferase    SAG2165
action filter_type
action find
entity ornithine carbamoyltransferase    SAG2165
relation cell component
type part
['ornithine carbamoyltransferase    SAG2165', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?t WHERE { resource:ornithine_carbamoyltransferase____SAG2165 property:cell_component ?t . ?t rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23493835,P681,c(Q15989253))
action filter_type
action find
entity Q23493835
relation P681
type Q15989253
[ANSWER] is a component of ornithine carbamoyltransferase SAG2165
['Q23493835', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?t WHERE { resource:Q23493835 property:P681 ?t . ?t rdf:type ontology:Q15989253 }
cytoplasm
Cytoplasm is a component of ornithine carbamoyltransferase SAG2165
cytoplasm
action filter_type
action find
entity ornithine carbamoyltransferase    SAG2165
relation cell component
type part
['ornithine carbamoyltransferase    SAG2165', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?t WHERE { resource:ornithine_carbamoyltransferase____SAG2165 property:cell_component ?t . ?t rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q27548424
Q15989253
USER
And what about peptidylprolyl isomerase CPR1 YDR155C?
(Q27548424,P681,c(Q15989253))
action filter_type
action find
entity Q27548424
relation P681
type Q15989253
['Q27548424', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q27548424 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
peptidylprolyl isomerase CPR1 YDR155C
action filter_type
action find
entity peptidylprolyl isomerase CPR1 YDR155C
relation cell component
type part
['peptidylprolyl isomerase CPR1 YDR155C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:peptidylprolyl_isomerase_CPR1_YDR155C property:cell_component ?e . ?e rdf:type ontology:part }
[]
part
Q39572 Q40260 Q79899
SYSTEM
mitochondrion, nucleus, cytoplasm
Q39572 Q40260 Q79899
(Q27548424,P681,c(Q15989253))
action filter_type
action find
entity Q27548424
relation P681
type Q15989253
[ANSWERS]
['Q27548424', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q27548424 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
mitochondrion nucleus cytoplasm
mitochondrion nucleus cytoplasm
action filter_type
action find
entity peptidylprolyl isomerase CPR1 YDR155C
relation cell component
type part
['peptidylprolyl isomerase CPR1 YDR155C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:peptidylprolyl_isomerase_CPR1_YDR155C property:cell_component ?e . ?e rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q79899 Q23225650
P702 P681
Q181394
USER
Which nutrients are the gene that are encoded by ornithine carbamoyltransferase    SAG2165 and are cytoplasm a cell component of ?
AND((c(Q181394),P702,Q23225650), (c(Q181394),P681,Q79899))
action filter_type
action intersection
action find_reverse
entity Q23225650
relation P702
action find_reverse
entity Q79899
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q23225650'], [{'concept': 'Q181394'}, 'P681', 'Q79899']]}
SELECT DISTINCT ?p WHERE { ?p property:P702 resource:Q23225650 . ?p property:P681 resource:Q79899 . ?p rdf:type ontology:Q181394 }
cytoplasm ornithine carbamoyltransferase    SAG2165
action filter_type
action intersection
action find_reverse
entity ornithine carbamoyltransferase    SAG2165
relation encoded by
action find_reverse
entity cytoplasm
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'ornithine carbamoyltransferase    SAG2165'], [{'concept': 'nutrient'}, 'cell component', 'cytoplasm']]}
SELECT DISTINCT ?p WHERE { ?p property:encoded_by resource:ornithine_carbamoyltransferase____SAG2165 . ?p property:cell_component resource:cytoplasm . ?p rdf:type ontology:nutrient }
[]
nutrient
Q23493835
SYSTEM
ornithine carbamoyltransferase    SAG2165
Q23493835
AND((c(Q181394),P702,Q23225650), (c(Q181394),P681,Q79899))
action filter_type
action intersection
action find_reverse
entity Q23225650
relation P702
action find_reverse
entity Q79899
relation P681
type Q181394
Of ornithine carbamoyltransferase SAG2165 is the gene that is encoded by ornithine carbamoyltransferase SAG2165 and is cytoplasm a cell component of
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q23225650'], [{'concept': 'Q181394'}, 'P681', 'Q79899']]}
SELECT DISTINCT ?p WHERE { ?p property:P702 resource:Q23225650 . ?p property:P681 resource:Q79899 . ?p rdf:type ontology:Q181394 }
ornithine carbamoyltransferase    SAG2165
Of ornithine carbamoyltransferase SAG2165 is the gene that is encoded by ornithine carbamoyltransferase SAG2165 and is cytoplasm a cell component of
ornithine carbamoyltransferase    SAG2165
action filter_type
action intersection
action find_reverse
entity ornithine carbamoyltransferase    SAG2165
relation encoded by
action find_reverse
entity cytoplasm
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'ornithine carbamoyltransferase    SAG2165'], [{'concept': 'nutrient'}, 'cell component', 'cytoplasm']]}
SELECT DISTINCT ?p WHERE { ?p property:encoded_by resource:ornithine_carbamoyltransferase____SAG2165 . ?p property:cell_component resource:cytoplasm . ?p rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q23493835 Q21102962
P703
Q631147
USER
Is the taxon to which ornithine carbamoyltransferase    SAG2165 belongs to Streptococcus agalactiae 2603V/R ?
(Q23493835,P703,Q21102962)
action is_in
entity Q21102962
action find
entity Q23493835
relation P703
['Q23493835', 'P703', 'Q21102962']
ASK WHERE { resource:Q23493835 property:P703 resource:Q21102962 }
ornithine carbamoyltransferase    SAG2165 Streptococcus agalactiae 2603V/R
action is_in
entity Streptococcus agalactiae 2603V/R
action find
entity ornithine carbamoyltransferase    SAG2165
relation found in taxon
['ornithine carbamoyltransferase    SAG2165', 'found in taxon', 'Streptococcus agalactiae 2603V/R']
ASK WHERE { resource:ornithine_carbamoyltransferase____SAG2165 property:found_in_taxon resource:Streptococcus_agalactiae_2603V/R }
[]
infraspecific name
SYSTEM
YES
(Q23493835,P703,Q21102962)
action is_in
entity Q21102962
action find
entity Q23493835
relation P703
[ANSWER]
['Q23493835', 'P703', 'Q21102962']
ASK WHERE { resource:Q23493835 property:P703 resource:Q21102962 }
Yes
action is_in
entity Streptococcus agalactiae 2603V/R
action find
entity ornithine carbamoyltransferase    SAG2165
relation found in taxon
['ornithine carbamoyltransferase    SAG2165', 'found in taxon', 'Streptococcus agalactiae 2603V/R']
ASK WHERE { resource:ornithine_carbamoyltransferase____SAG2165 property:found_in_taxon resource:Streptococcus_agalactiae_2603V/R }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23493835
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by ornithine carbamoyltransferase    SAG2165 ?
(c(Q863908),P688,Q23493835)
action filter_type
action find_reverse
entity Q23493835
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23493835']
SELECT DISTINCT ?h WHERE { ?h property:P688 resource:Q23493835 . ?h rdf:type ontology:Q863908 }
ornithine carbamoyltransferase    SAG2165
action filter_type
action find_reverse
entity ornithine carbamoyltransferase    SAG2165
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ornithine carbamoyltransferase    SAG2165']
SELECT DISTINCT ?h WHERE { ?h property:encodes resource:ornithine_carbamoyltransferase____SAG2165 . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23225650
SYSTEM
ornithine carbamoyltransferase    SAG2165
Q23225650
(c(Q863908),P688,Q23493835)
action filter_type
action find_reverse
entity Q23493835
relation P688
type Q863908
The nucleic acid sequence that is encoded by ornithine carbamoyltransferase SAG2165 is by ornithine carbamoyltransferase SAG2165
[{'concept': 'Q863908'}, 'P688', 'Q23493835']
SELECT DISTINCT ?h WHERE { ?h property:P688 resource:Q23493835 . ?h rdf:type ontology:Q863908 }
ornithine carbamoyltransferase    SAG2165
The nucleic acid sequence that is encoded by ornithine carbamoyltransferase SAG2165 is by ornithine carbamoyltransferase SAG2165
ornithine carbamoyltransferase    SAG2165
action filter_type
action find_reverse
entity ornithine carbamoyltransferase    SAG2165
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ornithine carbamoyltransferase    SAG2165']
SELECT DISTINCT ?h WHERE { ?h property:encodes resource:ornithine_carbamoyltransferase____SAG2165 . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23493835
P682
Q1057
USER
What is the metabolic process that ornithine carbamoyltransferase    SAG2165 is involved in ?
(Q23493835,P682,c(Q1057))
action filter_type
action find
entity Q23493835
relation P682
type Q1057
['Q23493835', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?j WHERE { resource:Q23493835 property:P682 ?j . ?j rdf:type ontology:Q1057 }
ornithine carbamoyltransferase    SAG2165
action filter_type
action find
entity ornithine carbamoyltransferase    SAG2165
relation biological process
type metabolic process
['ornithine carbamoyltransferase    SAG2165', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?j WHERE { resource:ornithine_carbamoyltransferase____SAG2165 property:biological_process ?j . ?j rdf:type ontology:metabolic_process }
[]
metabolic process
Q14859896
SYSTEM
cellular amino acid metabolic process
Q14859896
(Q23493835,P682,c(Q1057))
action filter_type
action find
entity Q23493835
relation P682
type Q1057
The metabolic process that ornithine carbamoyltransferase SAG2165 is involved in is the [ANSWER]
['Q23493835', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?j WHERE { resource:Q23493835 property:P682 ?j . ?j rdf:type ontology:Q1057 }
cellular amino acid metabolic process
The metabolic process that ornithine carbamoyltransferase SAG2165 is involved in is the cellular amino acid metabolic process
cellular amino acid metabolic process
action filter_type
action find
entity ornithine carbamoyltransferase    SAG2165
relation biological process
type metabolic process
['ornithine carbamoyltransferase    SAG2165', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?j WHERE { resource:ornithine_carbamoyltransferase____SAG2165 property:biological_process ?j . ?j rdf:type ontology:metabolic_process }
[]