Simple Question (Direct)
Simple Question
Q23491009
P703
Q631147
USER
Which taxon does ATP synthase F0F1 subunit delta    SMU_1531 belong to ?
(Q23491009,P703,c(Q631147))
action filter_type
action find
entity Q23491009
relation P703
type Q631147
['Q23491009', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { resource:Q23491009 property:P703 ?q . ?q rdf:type ontology:Q631147 }
ATP synthase F0F1 subunit delta    SMU_1531
action filter_type
action find
entity ATP synthase F0F1 subunit delta    SMU_1531
relation found in taxon
type infraspecific name
['ATP synthase F0F1 subunit delta    SMU_1531', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { resource:ATP_synthase_F0F1_subunit_delta____SMU_1531 property:found_in_taxon ?q . ?q rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102961
SYSTEM
Streptococcus mutans UA159
Q21102961
(Q23491009,P703,c(Q631147))
action filter_type
action find
entity Q23491009
relation P703
type Q631147
[ANSWER]
['Q23491009', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { resource:Q23491009 property:P703 ?q . ?q rdf:type ontology:Q631147 }
Streptococcus mutans UA159
Streptococcus mutans UA159
action filter_type
action find
entity ATP synthase F0F1 subunit delta    SMU_1531
relation found in taxon
type infraspecific name
['ATP synthase F0F1 subunit delta    SMU_1531', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { resource:ATP_synthase_F0F1_subunit_delta____SMU_1531 property:found_in_taxon ?q . ?q rdf:type ontology:infraspecific_name }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q21102961 Q24138630
P703
Q181394
USER
Is putative periplasmic M16 family chaperone    b3527 found in the taxon that infraspecific name ?
(Q24138630,P703,Q21102961)
action is_in
entity Q24138630
action find
entity Q21102961
relation P703
['Q24138630', 'P703', 'Q21102961']
ASK WHERE { resource:Q21102961 property:P703 resource:Q24138630 }
Streptococcus mutans UA159 putative periplasmic M16 family chaperone    b3527
action is_in
entity putative periplasmic M16 family chaperone    b3527
action find
entity Streptococcus mutans UA159
relation found in taxon
['putative periplasmic M16 family chaperone    b3527', 'found in taxon', 'Streptococcus mutans UA159']
ASK WHERE { resource:Streptococcus_mutans_UA159 property:found_in_taxon resource:putative_periplasmic_M16_family_chaperone____b3527 }
[]
nutrient
SYSTEM
NO
(Q24138630,P703,Q21102961)
action is_in
entity Q24138630
action find
entity Q21102961
relation P703
[ANSWER]
['Q24138630', 'P703', 'Q21102961']
ASK WHERE { resource:Q21102961 property:P703 resource:Q24138630 }
No
action is_in
entity putative periplasmic M16 family chaperone    b3527
action find
entity Streptococcus mutans UA159
relation found in taxon
['putative periplasmic M16 family chaperone    b3527', 'found in taxon', 'Streptococcus mutans UA159']
ASK WHERE { resource:Streptococcus_mutans_UA159 property:found_in_taxon resource:putative_periplasmic_M16_family_chaperone____b3527 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q23491009
P688
Q863908
USER
How many nucleic acid sequences encode ATP synthase F0F1 subunit delta    SMU_1531 ?
(c(Q863908),P688,Q23491009)
action count
action filter_type
action find_reverse
entity Q23491009
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23491009']
SELECT DISTINCT ( COUNT ( ?n ) AS ?c ) WHERE { ?n property:P688 resource:Q23491009 . ?n rdf:type ontology:Q863908 }
ATP synthase F0F1 subunit delta    SMU_1531
action count
action filter_type
action find_reverse
entity ATP synthase F0F1 subunit delta    SMU_1531
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ATP synthase F0F1 subunit delta    SMU_1531']
SELECT DISTINCT ( COUNT ( ?n ) AS ?c ) WHERE { ?n property:encodes resource:ATP_synthase_F0F1_subunit_delta____SMU_1531 . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q23217487
(c(Q863908),P688,Q23491009)
action count
action filter_type
action find_reverse
entity Q23491009
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q23491009']
SELECT DISTINCT ( COUNT ( ?n ) AS ?c ) WHERE { ?n property:P688 resource:Q23491009 . ?n rdf:type ontology:Q863908 }
ATP synthase F0F1 subunit delta    SMU_1531
1
action count
action filter_type
action find_reverse
entity ATP synthase F0F1 subunit delta    SMU_1531
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ATP synthase F0F1 subunit delta    SMU_1531']
SELECT DISTINCT ( COUNT ( ?n ) AS ?c ) WHERE { ?n property:encodes resource:ATP_synthase_F0F1_subunit_delta____SMU_1531 . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23491009
P681
Q5058355
USER
Which is the cell component of ATP synthase F0F1 subunit delta    SMU_1531 ?
(Q23491009,P681,c(Q5058355))
action filter_type
action find
entity Q23491009
relation P681
type Q5058355
['Q23491009', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q5058355 . resource:Q23491009 property:P681 ?p }
ATP synthase F0F1 subunit delta    SMU_1531
action filter_type
action find
entity ATP synthase F0F1 subunit delta    SMU_1531
relation cell component
type cellular component
['ATP synthase F0F1 subunit delta    SMU_1531', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:cellular_component . resource:ATP_synthase_F0F1_subunit_delta____SMU_1531 property:cell_component ?p }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q23491009,P681,c(Q5058355))
action filter_type
action find
entity Q23491009
relation P681
type Q5058355
The [ANSWER] is the cell component of ATP synthase F0F1 subunit delta SMU_1531
['Q23491009', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q5058355 . resource:Q23491009 property:P681 ?p }
plasma membrane
The plasma membrane is the cell component of ATP synthase F0F1 subunit delta SMU_1531
plasma membrane
action filter_type
action find
entity ATP synthase F0F1 subunit delta    SMU_1531
relation cell component
type cellular component
['ATP synthase F0F1 subunit delta    SMU_1531', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:cellular_component . resource:ATP_synthase_F0F1_subunit_delta____SMU_1531 property:cell_component ?p }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q29548
P361
Q5058355
USER
What are a component of that one ?
(c(Q5058355),P361,Q29548)
action filter_type
action find_reverse
entity Q29548
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', 'Q29548']
SELECT DISTINCT ?m WHERE { ?m property:P361 resource:Q29548 . ?m rdf:type ontology:Q5058355 }
plasma membrane
action filter_type
action find_reverse
entity plasma membrane
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'plasma membrane']
SELECT DISTINCT ?m WHERE { ?m property:part_of resource:plasma_membrane . ?m rdf:type ontology:cellular_component }
[]
cellular component
Q22327518 Q14864977 Q22327343
SYSTEM
plasma membrane region, plasma membrane part, plasma membrane-derived photosystem I
Q22327518 Q14864977 Q22327343
(c(Q5058355),P361,Q29548)
action filter_type
action find_reverse
entity Q29548
relation P361
type Q5058355
A component of that one are the [ANSWERS]
[{'concept': 'Q5058355'}, 'P361', 'Q29548']
SELECT DISTINCT ?m WHERE { ?m property:P361 resource:Q29548 . ?m rdf:type ontology:Q5058355 }
plasma membrane region plasma membrane part plasma membrane-derived photosystem I
A component of that one are the plasma membrane region, plasma membrane part and plasma membrane-derived photosystem I
plasma membrane region plasma membrane part plasma membrane-derived photosystem I
action filter_type
action find_reverse
entity plasma membrane
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'plasma membrane']
SELECT DISTINCT ?m WHERE { ?m property:part_of resource:plasma_membrane . ?m rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q22327518 Q14864977 Q22327343
P361
Q5058355
USER
Which cellular components are plasma membrane region, plasma membrane part and plasma membrane-derived photosystem I a portion of ?
(Q22327518,P361,c(Q5058355)) (Q14864977,P361,c(Q5058355)) (Q22327343,P361,c(Q5058355))
action union
action filter_type
action find
entity Q22327518
relation P361
type Q5058355
action filter_type
action find
entity Q14864977
relation P361
type Q5058355
action filter_type
action find
entity Q22327343
relation P361
type Q5058355
['Q22327518', 'P361', {'concept': 'Q5058355'}] ['Q14864977', 'P361', {'concept': 'Q5058355'}] ['Q22327343', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?b WHERE { { resource:Q22327518 property:P361 ?b . ?b rdf:type ontology:Q5058355 } UNION { resource:Q14864977 property:P361 ?b . ?b rdf:type ontology:Q5058355 } }
plasma membrane region plasma membrane part plasma membrane-derived photosystem I
action union
action filter_type
action find
entity plasma membrane region
relation part of
type cellular component
action filter_type
action find
entity plasma membrane part
relation part of
type cellular component
action filter_type
action find
entity plasma membrane-derived photosystem I
relation part of
type cellular component
['plasma membrane region', 'part of', {'concept': 'cellular component'}] ['plasma membrane part', 'part of', {'concept': 'cellular component'}] ['plasma membrane-derived photosystem I', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?b WHERE { { resource:plasma_membrane_region property:part_of ?b . ?b rdf:type ontology:cellular_component } UNION { resource:plasma_membrane_part property:part_of ?b . ?b rdf:type ontology:cellular_component } }
[]
cellular component
Q29548 Q29548 Q29548
SYSTEM
plasma membrane
Q29548 Q14353100 Q29548 Q29548
(Q22327518,P361,c(Q5058355)) (Q14864977,P361,c(Q5058355)) (Q22327343,P361,c(Q5058355))
action union
action filter_type
action find
entity Q22327518
relation P361
type Q5058355
action filter_type
action find
entity Q14864977
relation P361
type Q5058355
action filter_type
action find
entity Q22327343
relation P361
type Q5058355
[ANSWER], [ANSWER] and [ANSWER] are [ANSWER] region, [ANSWER] part and [ANSWER]-derived photosystem I a portion of
['Q22327518', 'P361', {'concept': 'Q5058355'}] ['Q14864977', 'P361', {'concept': 'Q5058355'}] ['Q22327343', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?b WHERE { { resource:Q22327518 property:P361 ?b . ?b rdf:type ontology:Q5058355 } UNION { resource:Q14864977 property:P361 ?b . ?b rdf:type ontology:Q5058355 } }
plasma membrane cell projection plasma membrane plasma membrane
Plasma membrane, plasma membrane and plasma membrane are plasma membrane region, plasma membrane part and plasma membrane-derived photosystem I a portion of
plasma membrane plasma membrane plasma membrane
action union
action filter_type
action find
entity plasma membrane region
relation part of
type cellular component
action filter_type
action find
entity plasma membrane part
relation part of
type cellular component
action filter_type
action find
entity plasma membrane-derived photosystem I
relation part of
type cellular component
['plasma membrane region', 'part of', {'concept': 'cellular component'}] ['plasma membrane part', 'part of', {'concept': 'cellular component'}] ['plasma membrane-derived photosystem I', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?b WHERE { { resource:plasma_membrane_region property:part_of ?b . ?b rdf:type ontology:cellular_component } UNION { resource:plasma_membrane_part property:part_of ?b . ?b rdf:type ontology:cellular_component } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23491009
P702
Q863908
USER
Which gene encodes ATP synthase F0F1 subunit delta    SMU_1531 ?
(Q23491009,P702,c(Q863908))
action filter_type
action find
entity Q23491009
relation P702
type Q863908
['Q23491009', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?u WHERE { resource:Q23491009 property:P702 ?u . ?u rdf:type ontology:Q863908 }
ATP synthase F0F1 subunit delta    SMU_1531
action filter_type
action find
entity ATP synthase F0F1 subunit delta    SMU_1531
relation encoded by
type nucleic acid sequence
['ATP synthase F0F1 subunit delta    SMU_1531', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?u WHERE { resource:ATP_synthase_F0F1_subunit_delta____SMU_1531 property:encoded_by ?u . ?u rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23217487
SYSTEM
ATP synthase F0F1 subunit delta    SMU_1531
Q23217487
(Q23491009,P702,c(Q863908))
action filter_type
action find
entity Q23491009
relation P702
type Q863908
ATP synthase F0F1 subunit delta SMU 1531 encodes ATP synthase F0F1 subunit delta SMU_1531
['Q23491009', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?u WHERE { resource:Q23491009 property:P702 ?u . ?u rdf:type ontology:Q863908 }
ATP synthase F0F1 subunit delta    SMU_1531
ATP synthase F0F1 subunit delta SMU 1531 encodes ATP synthase F0F1 subunit delta SMU_1531
ATP synthase F0F1 subunit delta    SMU_1531
action filter_type
action find
entity ATP synthase F0F1 subunit delta    SMU_1531
relation encoded by
type nucleic acid sequence
['ATP synthase F0F1 subunit delta    SMU_1531', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?u WHERE { resource:ATP_synthase_F0F1_subunit_delta____SMU_1531 property:encoded_by ?u . ?u rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P361
Q5058355 Q223557 Q5058355
USER
Which cellular components are parts of approximately 3 cellular components or physical objects ?
(c(Q5058355),P361,c(Q5058355)|c(Q223557))
action approx
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q223557
value 3
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q223557'}]]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?c ) ?g WHERE { VALUES ( ?h ) { ( ontology:Q5058355 ) ( ontology:Q223557 ) } . ?a rdf:type ?h } GROUP BY ?g } . FILTER ( ?c = 3 ) }
action approx
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type physical object
value 3
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'physical object'}]]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?c ) ?g WHERE { VALUES ( ?h ) { ( ontology:cellular_component ) ( ontology:physical_object ) } . ?a rdf:type ?h } GROUP BY ?g } . FILTER ( ?c = 3 ) }
[]
cellular component physical object cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(c(Q5058355),P361,c(Q5058355)|c(Q223557))
action approx
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q223557
value 3
The [ANSWER] is parts of approximately 3 cellular components or physical objects
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q223557'}]]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?c ) ?g WHERE { VALUES ( ?h ) { ( ontology:Q5058355 ) ( ontology:Q223557 ) } . ?a rdf:type ?h } GROUP BY ?g } . FILTER ( ?c = 3 ) }
plasma membrane
The plasma membrane is parts of approximately 3 cellular components or physical objects
plasma membrane
action approx
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type physical object
value 3
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'physical object'}]]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?c ) ?g WHERE { VALUES ( ?h ) { ( ontology:cellular_component ) ( ontology:physical_object ) } . ?a rdf:type ?h } GROUP BY ?g } . FILTER ( ?c = 3 ) }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P361
Q15989253 Q5058355
USER
Which parts are exactly 2 cellular components a component of ?
(c(Q5058355),P361,c(Q15989253))
action equal
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
value 2
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ?h ( COUNT ( ?g ) AS ?j ) WHERE { ?h rdf:type ontology:Q15989253 . ?g rdf:type ontology:Q5058355 . ?g property:P361 ?h } GROUP BY ?h } . FILTER ( ?j = 2 ) }
action equal
action find_reverse_tuple_counts
relation part of
type part
type cellular component
value 2
[{'concept': 'cellular component'}, 'part of', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ?h ( COUNT ( ?g ) AS ?j ) WHERE { ?h rdf:type ontology:part . ?g rdf:type ontology:cellular_component . ?g property:part_of ?h } GROUP BY ?h } . FILTER ( ?j = 2 ) }
[]
part cellular component
Q14349455 Q45948
SYSTEM
membrane, organelle
Q14349455 Q45948
(c(Q5058355),P361,c(Q15989253))
action equal
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
value 2
The [ANSWERS] are exactly 2 cellular components a component of
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ?h ( COUNT ( ?g ) AS ?j ) WHERE { ?h rdf:type ontology:Q15989253 . ?g rdf:type ontology:Q5058355 . ?g property:P361 ?h } GROUP BY ?h } . FILTER ( ?j = 2 ) }
membrane organelle
The membrane and organelle are exactly 2 cellular components a component of
membrane organelle
action equal
action find_reverse_tuple_counts
relation part of
type part
type cellular component
value 2
[{'concept': 'cellular component'}, 'part of', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ?h ( COUNT ( ?g ) AS ?j ) WHERE { ?h rdf:type ontology:part . ?g rdf:type ontology:cellular_component . ?g property:part_of ?h } GROUP BY ?h } . FILTER ( ?j = 2 ) }
[]