Simple Question (Direct)
Simple Question
Q21988507
P703
Q16521
USER
Where is Radial spoke head protein 9 homolog found ?
(Q21988507,P703,c(Q16521))
action filter_type
action find
entity Q21988507
relation P703
type Q16521
['Q21988507', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:Q16521 . resource:Q21988507 property:P703 ?r }
Radial spoke head protein 9 homolog
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation found in taxon
type taxon
['Radial spoke head protein 9 homolog', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:taxon . resource:Radial_spoke_head_protein_9_homolog property:found_in_taxon ?r }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
(Q21988507,P703,c(Q16521))
action filter_type
action find
entity Q21988507
relation P703
type Q16521
Radial spoke head protein 9 homolog is found in [ANSWER]
['Q21988507', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:Q16521 . resource:Q21988507 property:P703 ?r }
Mus musculus
Radial spoke head protein 9 homolog is found in Mus musculus
Mus musculus
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation found in taxon
type taxon
['Radial spoke head protein 9 homolog', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:taxon . resource:Radial_spoke_head_protein_9_homolog property:found_in_taxon ?r }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21988507
P680
Q2996394
USER
Which biological process represents molecular function of Radial spoke head protein 9 homolog ?
(Q21988507,P680,c(Q2996394))
action filter_type
action find
entity Q21988507
relation P680
type Q2996394
['Q21988507', 'P680', {'concept': 'Q2996394'}]
SELECT DISTINCT ?c WHERE { resource:Q21988507 property:P680 ?c . ?c rdf:type ontology:Q2996394 }
Radial spoke head protein 9 homolog
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation molecular function
type biological process
['Radial spoke head protein 9 homolog', 'molecular function', {'concept': 'biological process'}]
SELECT DISTINCT ?c WHERE { resource:Radial_spoke_head_protein_9_homolog property:molecular_function ?c . ?c rdf:type ontology:biological_process }
[]
biological process
Q14860489
SYSTEM
molecular function
Q14860489
(Q21988507,P680,c(Q2996394))
action filter_type
action find
entity Q21988507
relation P680
type Q2996394
[ANSWER] represents [ANSWER] of Radial spoke head protein 9 homolog
['Q21988507', 'P680', {'concept': 'Q2996394'}]
SELECT DISTINCT ?c WHERE { resource:Q21988507 property:P680 ?c . ?c rdf:type ontology:Q2996394 }
molecular function
Molecular function represents molecular function of Radial spoke head protein 9 homolog
molecular function
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation molecular function
type biological process
['Radial spoke head protein 9 homolog', 'molecular function', {'concept': 'biological process'}]
SELECT DISTINCT ?c WHERE { resource:Radial_spoke_head_protein_9_homolog property:molecular_function ?c . ?c rdf:type ontology:biological_process }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21988507
P681
Q5058355
USER
Which cellular components are components of that nutrient ?
(Q14860489,P681,c(Q5058355))
action filter_type
action find
entity Q21988507
relation P681
type Q5058355
['Q14860489', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?o WHERE { resource:Q21988507 property:P681 ?o . ?o rdf:type ontology:Q5058355 }
Radial spoke head protein 9 homolog
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation cell component
type cellular component
['molecular function', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?o WHERE { resource:Radial_spoke_head_protein_9_homolog property:cell_component ?o . ?o rdf:type ontology:cellular_component }
[]
cellular component
Q180436 Q14353100
SYSTEM
cilium, cell projection
Q180436 Q14353100
(Q14860489,P681,c(Q5058355))
action filter_type
action find
entity Q21988507
relation P681
type Q5058355
[ANSWERS] are components of that nutrient
['Q14860489', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?o WHERE { resource:Q21988507 property:P681 ?o . ?o rdf:type ontology:Q5058355 }
cilium cell projection
Cilium and cell projection are components of that nutrient
cilium cell projection
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation cell component
type cellular component
['molecular function', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?o WHERE { resource:Radial_spoke_head_protein_9_homolog property:cell_component ?o . ?o rdf:type ontology:cellular_component }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q21989882
P681
Q181394
USER
Do Polycystic kidney disease 2-like 1 protein have those ones as their cell component ?
(Q21989882,P681,Q180436) (Q21989882,P681,Q14353100)
action is_in
entity prev_answer
action find
entity Q21989882
relation P681
['Q21989882', 'P681', 'Q180436'] ['Q21989882', 'P681', 'Q14353100']
ASK WHERE { resource:Q21989882 property:P681 ?h . VALUES ( ?h ) { ( resource:Q180436 ) ( resource:Q14353100 ) } }
Polycystic kidney disease 2-like 1 protein
action is_in
entity prev_answer
action find
entity Polycystic kidney disease 2-like 1 protein
relation cell component
['Polycystic kidney disease 2-like 1 protein', 'cell component', 'cilium'] ['Polycystic kidney disease 2-like 1 protein', 'cell component', 'cell projection']
ASK WHERE { resource:Polycystic_kidney_disease_2-like_1_protein property:cell_component ?h . VALUES ( ?h ) { ( resource:cilium ) ( resource:cell_projection ) } }
[]
nutrient
SYSTEM
YES
(Q21989882,P681,Q180436) (Q21989882,P681,Q14353100)
action is_in
entity prev_answer
action find
entity Q21989882
relation P681
[ANSWER]
['Q21989882', 'P681', 'Q180436'] ['Q21989882', 'P681', 'Q14353100']
ASK WHERE { resource:Q21989882 property:P681 ?h . VALUES ( ?h ) { ( resource:Q180436 ) ( resource:Q14353100 ) } }
Yes
action is_in
entity prev_answer
action find
entity Polycystic kidney disease 2-like 1 protein
relation cell component
['Polycystic kidney disease 2-like 1 protein', 'cell component', 'cilium'] ['Polycystic kidney disease 2-like 1 protein', 'cell component', 'cell projection']
ASK WHERE { resource:Polycystic_kidney_disease_2-like_1_protein property:cell_component ?h . VALUES ( ?h ) { ( resource:cilium ) ( resource:cell_projection ) } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Logical operators
Q21988507
P681
Q45948 Q5058355
USER
How many organelles and cellular components are the cell components of Radial spoke head protein 9 homolog ?
(Q21988507,P681,c(Q45948)) (Q21988507,P681,c(Q5058355))
action count
action union
action filter_type
action find
entity Q21988507
relation P681
type Q45948
action filter_type
action find
entity Q21988507
relation P681
type Q5058355
['Q21988507', 'P681', {'concept': 'Q45948'}] ['Q21988507', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?u ) WHERE { { resource:Q21988507 property:P681 ?z . ?z rdf:type ontology:Q45948 } UNION { ?z rdf:type ontology:Q5058355 . resource:Q21988507 property:P681 ?z } }
Radial spoke head protein 9 homolog
action count
action union
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation cell component
type organelle
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation cell component
type cellular component
['Radial spoke head protein 9 homolog', 'cell component', {'concept': 'organelle'}] ['Radial spoke head protein 9 homolog', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?u ) WHERE { { resource:Radial_spoke_head_protein_9_homolog property:cell_component ?z . ?z rdf:type ontology:organelle } UNION { ?z rdf:type ontology:cellular_component . resource:Radial_spoke_head_protein_9_homolog property:cell_component ?z } }
[]
organelle cellular component
SYSTEM
1 organelles and 2 cellular components
Q15317343 Q180436 Q14353100
(Q21988507,P681,c(Q45948)) (Q21988507,P681,c(Q5058355))
action count
action union
action filter_type
action find
entity Q21988507
relation P681
type Q45948
action filter_type
action find
entity Q21988507
relation P681
type Q5058355
[ANSWER]
['Q21988507', 'P681', {'concept': 'Q45948'}] ['Q21988507', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?u ) WHERE { { resource:Q21988507 property:P681 ?z . ?z rdf:type ontology:Q45948 } UNION { ?z rdf:type ontology:Q5058355 . resource:Q21988507 property:P681 ?z } }
motile cilium cilium cell projection
1 organelles and 2 cellular components
action count
action union
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation cell component
type organelle
action filter_type
action find
entity Radial spoke head protein 9 homolog
relation cell component
type cellular component
['Radial spoke head protein 9 homolog', 'cell component', {'concept': 'organelle'}] ['Radial spoke head protein 9 homolog', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?u ) WHERE { { resource:Radial_spoke_head_protein_9_homolog property:cell_component ?z . ?z rdf:type ontology:organelle } UNION { ?z rdf:type ontology:cellular_component . resource:Radial_spoke_head_protein_9_homolog property:cell_component ?z } }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q14907717
Q181394
USER
And how about Caspase-9?
(Q14907717,P681,c(Q181394))
action filter_type
action find
entity Q14907717
relation P681
type Q181394
['Q14907717', 'P681', {'concept': 'Q181394'}]
SELECT DISTINCT ?s WHERE { resource:Q14907717 property:P681 ?s . ?s rdf:type ontology:Q181394 }
Caspase-9
action filter_type
action find
entity Caspase-9
relation cell component
type nutrient
['Caspase-9', 'cell component', {'concept': 'nutrient'}]
SELECT DISTINCT ?s WHERE { resource:Caspase-9 property:cell_component ?s . ?s rdf:type ontology:nutrient }
[]
nutrient
Q2061363
SYSTEM
apoptosome
Q2061363
(Q14907717,P681,c(Q181394))
action filter_type
action find
entity Q14907717
relation P681
type Q181394
[ANSWER]
['Q14907717', 'P681', {'concept': 'Q181394'}]
SELECT DISTINCT ?s WHERE { resource:Q14907717 property:P681 ?s . ?s rdf:type ontology:Q181394 }
apoptosome
apoptosome
action filter_type
action find
entity Caspase-9
relation cell component
type nutrient
['Caspase-9', 'cell component', {'concept': 'nutrient'}]
SELECT DISTINCT ?s WHERE { resource:Caspase-9 property:cell_component ?s . ?s rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q24148288 Q14907717
P688
Q863908
USER
Which nucleic acid sequences encode Caspase-9 or putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019 ?
OR((c(Q863908),P688,Q14907717), (c(Q863908),P688,Q24148288))
action filter_type
action union
action find_reverse
entity Q14907717
relation P688
action find_reverse
entity Q24148288
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q14907717'], [{'concept': 'Q863908'}, 'P688', 'Q24148288']]}
SELECT DISTINCT ?w WHERE { { { ?w property:P688 resource:Q14907717 } UNION { ?w property:P688 resource:Q24148288 } } . ?w rdf:type ontology:Q863908 }
putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019 Caspase-9
action filter_type
action union
action find_reverse
entity Caspase-9
relation encodes
action find_reverse
entity putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Caspase-9'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019']]}
SELECT DISTINCT ?w WHERE { { { ?w property:encodes resource:Caspase-9 } UNION { ?w property:encodes resource:putative_fimbrial_biogenesis_outer_membrane_usher_protein____ECUMN_0019 } } . ?w rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q14907715 Q23145345
SYSTEM
Casp9, putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
Q14907715 Q23145345
OR((c(Q863908),P688,Q14907717), (c(Q863908),P688,Q24148288))
action filter_type
action union
action find_reverse
entity Q14907717
relation P688
action find_reverse
entity Q24148288
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q14907717'], [{'concept': 'Q863908'}, 'P688', 'Q24148288']]}
SELECT DISTINCT ?w WHERE { { { ?w property:P688 resource:Q14907717 } UNION { ?w property:P688 resource:Q24148288 } } . ?w rdf:type ontology:Q863908 }
Casp9 putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
Casp9 and putative fimbrial biogenesis outer membrane usher protein ECUMN 0019 encode Caspase-9 or putative fimbrial biogenesis outer membrane usher protein ECUMN_0019
Casp9 putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
action filter_type
action union
action find_reverse
entity Caspase-9
relation encodes
action find_reverse
entity putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Caspase-9'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019']]}
SELECT DISTINCT ?w WHERE { { { ?w property:encodes resource:Caspase-9 } UNION { ?w property:encodes resource:putative_fimbrial_biogenesis_outer_membrane_usher_protein____ECUMN_0019 } } . ?w rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q14907715 Q23145345
P688
Q181394
USER
What do those nucleic acid sequences encode ?
(Q14907715,P688,c(Q181394)) (Q23145345,P688,c(Q181394))
action filter_type
action find
entity prev_answer
relation P688
type Q181394
['Q14907715', 'P688', {'concept': 'Q181394'}] ['Q23145345', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?f WHERE { ?c property:P688 ?f . ?f rdf:type ontology:Q181394 . VALUES ( ?c ) { ( resource:Q14907715 ) ( resource:Q23145345 ) } }
Casp9 putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
action filter_type
action find
entity prev_answer
relation encodes
type nutrient
['Casp9', 'encodes', {'concept': 'nutrient'}] ['putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?f WHERE { ?c property:encodes ?f . ?f rdf:type ontology:nutrient . VALUES ( ?c ) { ( resource:Casp9 ) ( resource:putative_fimbrial_biogenesis_outer_membrane_usher_protein____ECUMN_0019 ) } }
[]
nutrient
Q14907717 Q24148288
SYSTEM
Caspase-9, putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
Q14907717 Q24148288
(Q14907715,P688,c(Q181394)) (Q23145345,P688,c(Q181394))
action filter_type
action find
entity prev_answer
relation P688
type Q181394
[ANSWERS]
['Q14907715', 'P688', {'concept': 'Q181394'}] ['Q23145345', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?f WHERE { ?c property:P688 ?f . ?f rdf:type ontology:Q181394 . VALUES ( ?c ) { ( resource:Q14907715 ) ( resource:Q23145345 ) } }
Caspase-9 putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
Those nucleic acid sequences encode the Caspase-9 and putative fimbrial biogenesis outer membrane usher protein ECUMN 0019
Caspase-9 putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
action filter_type
action find
entity prev_answer
relation encodes
type nutrient
['Casp9', 'encodes', {'concept': 'nutrient'}] ['putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?f WHERE { ?c property:encodes ?f . ?f rdf:type ontology:nutrient . VALUES ( ?c ) { ( resource:Casp9 ) ( resource:putative_fimbrial_biogenesis_outer_membrane_usher_protein____ECUMN_0019 ) } }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q14907717 Q24148288
P681
Q15989253
USER
Which parts are components of Caspase-9 and putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019 ?
(Q14907717,P681,c(Q15989253)) (Q24148288,P681,c(Q15989253))
action union
action filter_type
action find
entity Q14907717
relation P681
type Q15989253
action filter_type
action find
entity Q24148288
relation P681
type Q15989253
['Q14907717', 'P681', {'concept': 'Q15989253'}] ['Q24148288', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { VALUES ( ?m ) { ( resource:Q14907717 ) ( resource:Q24148288 ) } . ?m property:P681 ?s }
Caspase-9 putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
action union
action filter_type
action find
entity Caspase-9
relation cell component
type part
action filter_type
action find
entity putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
relation cell component
type part
['Caspase-9', 'cell component', {'concept': 'part'}] ['putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { VALUES ( ?m ) { ( resource:Caspase-9 ) ( resource:putative_fimbrial_biogenesis_outer_membrane_usher_protein____ECUMN_0019 ) } . ?m property:cell_component ?s }
[]
part
Q39572 Q79899 Q40260
SYSTEM
mitochondrion, cytoplasm, nucleus
Q39572 Q79899 Q40260 Q14349455
(Q14907717,P681,c(Q15989253)) (Q24148288,P681,c(Q15989253))
action union
action filter_type
action find
entity Q14907717
relation P681
type Q15989253
action filter_type
action find
entity Q24148288
relation P681
type Q15989253
The [ANSWERS] are components of Caspase-9 and putative fimbrial biogenesis outer membrane usher protein ECUMN_0019
['Q14907717', 'P681', {'concept': 'Q15989253'}] ['Q24148288', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { VALUES ( ?m ) { ( resource:Q14907717 ) ( resource:Q24148288 ) } . ?m property:P681 ?s }
mitochondrion cytoplasm nucleus membrane
The mitochondrion, cytoplasm and nucleus are components of Caspase-9 and putative fimbrial biogenesis outer membrane usher protein ECUMN_0019
mitochondrion cytoplasm nucleus
action union
action filter_type
action find
entity Caspase-9
relation cell component
type part
action filter_type
action find
entity putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019
relation cell component
type part
['Caspase-9', 'cell component', {'concept': 'part'}] ['putative fimbrial biogenesis outer membrane usher protein    ECUMN_0019', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { VALUES ( ?m ) { ( resource:Caspase-9 ) ( resource:putative_fimbrial_biogenesis_outer_membrane_usher_protein____ECUMN_0019 ) } . ?m property:cell_component ?s }
[]