Simple Question (Direct)
Simple Question
Q22678293
P702
Q863908
USER
What is the gene that encodes Bile acid-CoA:amino acid N-acyltransferase ?
(Q22678293,P702,c(Q863908))
action filter_type
action find
entity Q22678293
relation P702
type Q863908
['Q22678293', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?x WHERE { resource:Q22678293 property:P702 ?x . ?x rdf:type ontology:Q863908 }
Bile acid-CoA:amino acid N-acyltransferase
action filter_type
action find
entity Bile acid-CoA:amino acid N-acyltransferase
relation encoded by
type nucleic acid sequence
['Bile acid-CoA:amino acid N-acyltransferase', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?x WHERE { resource:Bile_acid-CoA:amino_acid_N-acyltransferase property:encoded_by ?x . ?x rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q17836807
SYSTEM
BAAT
Q17836807
(Q22678293,P702,c(Q863908))
action filter_type
action find
entity Q22678293
relation P702
type Q863908
The gene that encodes Bile acid-CoA : amino acid N-acyltransferase is called [ANSWER]
['Q22678293', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?x WHERE { resource:Q22678293 property:P702 ?x . ?x rdf:type ontology:Q863908 }
BAAT
The gene that encodes Bile acid-CoA : amino acid N-acyltransferase is called BAAT
BAAT
action filter_type
action find
entity Bile acid-CoA:amino acid N-acyltransferase
relation encoded by
type nucleic acid sequence
['Bile acid-CoA:amino acid N-acyltransferase', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?x WHERE { resource:Bile_acid-CoA:amino_acid_N-acyltransferase property:encoded_by ?x . ?x rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22678293
P682
Q1057
USER
What is the metabolic process that Bile acid-CoA:amino acid N-acyltransferase is involved in ?
(Q22678293,P682,c(Q1057))
action filter_type
action find
entity Q22678293
relation P682
type Q1057
['Q22678293', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?z WHERE { resource:Q22678293 property:P682 ?z . ?z rdf:type ontology:Q1057 }
Bile acid-CoA:amino acid N-acyltransferase
action filter_type
action find
entity Bile acid-CoA:amino acid N-acyltransferase
relation biological process
type metabolic process
['Bile acid-CoA:amino acid N-acyltransferase', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?z WHERE { resource:Bile_acid-CoA:amino_acid_N-acyltransferase property:biological_process ?z . ?z rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349667
SYSTEM
lipid metabolic process
Q14349667
(Q22678293,P682,c(Q1057))
action filter_type
action find
entity Q22678293
relation P682
type Q1057
The metabolic process that Bile acid-CoA: amino acid N-acyltransferase is involved in is [ANSWER]
['Q22678293', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?z WHERE { resource:Q22678293 property:P682 ?z . ?z rdf:type ontology:Q1057 }
lipid metabolic process
The metabolic process that Bile acid-CoA: amino acid N-acyltransferase is involved in is lipid metabolic process
lipid metabolic process
action filter_type
action find
entity Bile acid-CoA:amino acid N-acyltransferase
relation biological process
type metabolic process
['Bile acid-CoA:amino acid N-acyltransferase', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?z WHERE { resource:Bile_acid-CoA:amino_acid_N-acyltransferase property:biological_process ?z . ?z rdf:type ontology:metabolic_process }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q17836807
P688
Q181394
USER
How many nutrients are encoded by BAAT ?
(Q17836807,P688,c(Q181394))
action count
action filter_type
action find
entity Q17836807
relation P688
type Q181394
['Q17836807', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?k ) WHERE { resource:Q17836807 property:P688 ?x . ?x rdf:type ontology:Q181394 }
BAAT
action count
action filter_type
action find
entity BAAT
relation encodes
type nutrient
['BAAT', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?k ) WHERE { resource:BAAT property:encodes ?x . ?x rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q22678293
(Q17836807,P688,c(Q181394))
action count
action filter_type
action find
entity Q17836807
relation P688
type Q181394
[ANSWER]
['Q17836807', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?k ) WHERE { resource:Q17836807 property:P688 ?x . ?x rdf:type ontology:Q181394 }
Bile acid-CoA:amino acid N-acyltransferase
1
action count
action filter_type
action find
entity BAAT
relation encodes
type nutrient
['BAAT', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?k ) WHERE { resource:BAAT property:encodes ?x . ?x rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Incomplete
Q22296832
P688
Q181394
USER
And how about hypothetical protein    Cj0371?
(Q22296832,P688,c(Q181394))
action count
action filter_type
action find
entity Q22296832
relation P688
type Q181394
['Q22296832', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?g ) WHERE { resource:Q22296832 property:P688 ?x . ?x rdf:type ontology:Q181394 }
hypothetical protein    Cj0371
action count
action filter_type
action find
entity hypothetical protein    Cj0371
relation encodes
type nutrient
['hypothetical protein    Cj0371', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?g ) WHERE { resource:hypothetical_protein____Cj0371 property:encodes ?x . ?x rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q22300790
(Q22296832,P688,c(Q181394))
action count
action filter_type
action find
entity Q22296832
relation P688
type Q181394
[ANSWER]
['Q22296832', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?g ) WHERE { resource:Q22296832 property:P688 ?x . ?x rdf:type ontology:Q181394 }
hypothetical protein    Cj0371
1
action count
action filter_type
action find
entity hypothetical protein    Cj0371
relation encodes
type nutrient
['hypothetical protein    Cj0371', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?g ) WHERE { resource:hypothetical_protein____Cj0371 property:encodes ?x . ?x rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q22225291
Q181394
USER
And how about DNA-binding transcriptional activator    ECIAI39_4018?
(Q22225291,P688,c(Q181394))
action count
action filter_type
action find
entity Q22225291
relation P688
type Q181394
['Q22225291', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?y ) WHERE { resource:Q22225291 property:P688 ?j . ?j rdf:type ontology:Q181394 }
DNA-binding transcriptional activator    ECIAI39_4018
action count
action filter_type
action find
entity DNA-binding transcriptional activator    ECIAI39_4018
relation encodes
type nutrient
['DNA-binding transcriptional activator    ECIAI39_4018', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?y ) WHERE { resource:DNA-binding_transcriptional_activator____ECIAI39_4018 property:encodes ?j . ?j rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
(Q22225291,P688,c(Q181394))
action count
action filter_type
action find
entity Q22225291
relation P688
type Q181394
[ANSWER]
['Q22225291', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?y ) WHERE { resource:Q22225291 property:P688 ?j . ?j rdf:type ontology:Q181394 }
1
action count
action filter_type
action find
entity DNA-binding transcriptional activator    ECIAI39_4018
relation encodes
type nutrient
['DNA-binding transcriptional activator    ECIAI39_4018', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?y ) WHERE { resource:DNA-binding_transcriptional_activator____ECIAI39_4018 property:encodes ?j . ?j rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q22225291
P703
Q16521
USER
Which taxon is that nucleic acid sequence found in ?
action filter_type
action find
entity Q22225291
relation P703
type Q16521
SELECT DISTINCT ?w WHERE { resource:Q22225291 property:P703 ?w . ?w rdf:type ontology:Q16521 }
DNA-binding transcriptional activator    ECIAI39_4018
action filter_type
action find
entity DNA-binding transcriptional activator    ECIAI39_4018
relation found in taxon
type taxon
SELECT DISTINCT ?w WHERE { resource:DNA-binding_transcriptional_activator____ECIAI39_4018 property:found_in_taxon ?w . ?w rdf:type ontology:taxon }
[]
taxon
Q21102933
SYSTEM
Escherichia coli IAI39
Q21102933
action filter_type
action find
entity Q22225291
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
SELECT DISTINCT ?w WHERE { resource:Q22225291 property:P703 ?w . ?w rdf:type ontology:Q16521 }
Escherichia coli IAI39
That nucleic acid sequence is found in Escherichia coli IAI39
Escherichia coli IAI39
action filter_type
action find
entity DNA-binding transcriptional activator    ECIAI39_4018
relation found in taxon
type taxon
SELECT DISTINCT ?w WHERE { resource:DNA-binding_transcriptional_activator____ECIAI39_4018 property:found_in_taxon ?w . ?w rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21102933
P828
Q12136
USER
What does that taxon lead to ?
(c(Q12136),P828,Q21102933)
action filter_type
action find_reverse
entity Q21102933
relation P828
type Q12136
[{'concept': 'Q12136'}, 'P828', 'Q21102933']
SELECT DISTINCT ?p WHERE { ?p property:P828 resource:Q21102933 . ?p rdf:type ontology:Q12136 }
Escherichia coli IAI39
action filter_type
action find_reverse
entity Escherichia coli IAI39
relation has cause
type disease
[{'concept': 'disease'}, 'has cause', 'Escherichia coli IAI39']
SELECT DISTINCT ?p WHERE { ?p property:has_cause resource:Escherichia_coli_IAI39 . ?p rdf:type ontology:disease }
[]
disease
Q18975220
SYSTEM
Escherichia coli infectious disease
Q18975220
(c(Q12136),P828,Q21102933)
action filter_type
action find_reverse
entity Q21102933
relation P828
type Q12136
That taxon leads to [ANSWER]
[{'concept': 'Q12136'}, 'P828', 'Q21102933']
SELECT DISTINCT ?p WHERE { ?p property:P828 resource:Q21102933 . ?p rdf:type ontology:Q12136 }
Escherichia coli infectious disease
That taxon leads to Escherichia coli infectious disease
Escherichia coli infectious disease
action filter_type
action find_reverse
entity Escherichia coli IAI39
relation has cause
type disease
[{'concept': 'disease'}, 'has cause', 'Escherichia coli IAI39']
SELECT DISTINCT ?p WHERE { ?p property:has_cause resource:Escherichia_coli_IAI39 . ?p rdf:type ontology:disease }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18975220
P2175
Q8386
USER
Which drugs are used to cure that disease ?
(c(Q8386),P2175,Q18975220)
action filter_type
action find_reverse
entity Q18975220
relation P2175
type Q8386
[{'concept': 'Q8386'}, 'P2175', 'Q18975220']
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:Q8386 . ?n property:P2175 resource:Q18975220 }
Escherichia coli infectious disease
action filter_type
action find_reverse
entity Escherichia coli infectious disease
relation medical condition treated
type drug
[{'concept': 'drug'}, 'medical condition treated', 'Escherichia coli infectious disease']
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:drug . ?n property:medical_condition_treated resource:Escherichia_coli_infectious_disease }
[]
drug
Q424940 Q976559 Q256602
SYSTEM
Moxifloxacin, Sparfloxacin, Ciprofloxacin
Q4112207 Q1088175 Q2552927 Q183554 Q808845 Q1639616 Q203618 Q20817140 Q2319020 Q2365016 Q411447 Q2601530 Q244150 Q422665 Q2878140 Q421713 Q163901 Q976559 Q544393 Q1453445 Q423787 Q553220 Q1082945 Q417897 Q281082 Q411417 Q417968 Q424940 Q3231623 Q413728 Q2325775 Q415739 Q419521 Q2602246 Q415167 Q424193 Q256602 Q421670 Q81890
(c(Q8386),P2175,Q18975220)
action filter_type
action find_reverse
entity Q18975220
relation P2175
type Q8386
[ANSWERS] are used to cure that disease
[{'concept': 'Q8386'}, 'P2175', 'Q18975220']
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:Q8386 . ?n property:P2175 resource:Q18975220 }
bismuth subcitrate Polymyxin B Sulfate Cefepime Fosfomycin Ceftazidime enoxacin Lomefloxacin Colistimethate cefadroxil Gatifloxacin Ofloxacin Cefamandole Ampicillin Trimethoprim Bacampicillin ceftriaxone Cefixime Sparfloxacin Trovafloxacin Cefdinir Piperacillin Ertapenem Ceftizoxime Norfloxacin Nalidixic Acid cephalexin Cefotaxime Moxifloxacin Cefprozil Cefuroxime cefoperazone Cefazolin Ceftibuten Cefotetan Cefaclor Levofloxacin Ciprofloxacin Meropenem Bismuth Subsalicylate
Moxifloxacin, Sparfloxacin and Ciprofloxacin are used to cure that disease
Moxifloxacin Sparfloxacin Ciprofloxacin
action filter_type
action find_reverse
entity Escherichia coli infectious disease
relation medical condition treated
type drug
[{'concept': 'drug'}, 'medical condition treated', 'Escherichia coli infectious disease']
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:drug . ?n property:medical_condition_treated resource:Escherichia_coli_infectious_disease }
[]