Simple Question (Direct)
Simple Question
Q21990676
P681
Q5058355
USER
What is a component of Beta-tectorin ?
(Q21990676,P681,c(Q5058355))
action filter_type
action find
entity Q21990676
relation P681
type Q5058355
['Q21990676', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?z WHERE { resource:Q21990676 property:P681 ?z . ?z rdf:type ontology:Q5058355 }
Beta-tectorin
action filter_type
action find
entity Beta-tectorin
relation cell component
type cellular component
['Beta-tectorin', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?z WHERE { resource:Beta-tectorin property:cell_component ?z . ?z rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q21990676,P681,c(Q5058355))
action filter_type
action find
entity Q21990676
relation P681
type Q5058355
A component of Beta- tectorin is the [ANSWER]
['Q21990676', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?z WHERE { resource:Q21990676 property:P681 ?z . ?z rdf:type ontology:Q5058355 }
plasma membrane
A component of Beta- tectorin is the plasma membrane
plasma membrane
action filter_type
action find
entity Beta-tectorin
relation cell component
type cellular component
['Beta-tectorin', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?z WHERE { resource:Beta-tectorin property:cell_component ?z . ?z rdf:type ontology:cellular_component }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21990676
P703
Q16521
USER
Where is that nutrient found ?
(Q29548,P703,c(Q16521))
action filter_type
action find
entity Q21990676
relation P703
type Q16521
['Q29548', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?u WHERE { resource:Q21990676 property:P703 ?u . ?u rdf:type ontology:Q16521 }
Beta-tectorin
action filter_type
action find
entity Beta-tectorin
relation found in taxon
type taxon
['plasma membrane', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?u WHERE { resource:Beta-tectorin property:found_in_taxon ?u . ?u rdf:type ontology:taxon }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
(Q29548,P703,c(Q16521))
action filter_type
action find
entity Q21990676
relation P703
type Q16521
That nutrient is found in [ANSWER]
['Q29548', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?u WHERE { resource:Q21990676 property:P703 ?u . ?u rdf:type ontology:Q16521 }
Mus musculus
That nutrient is found in Mus musculus
Mus musculus
action filter_type
action find
entity Beta-tectorin
relation found in taxon
type taxon
['plasma membrane', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?u WHERE { resource:Beta-tectorin property:found_in_taxon ?u . ?u rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q83310 Q21991487
P703
Q181394
USER
Is Translocon-associated protein subunit gamma a part of the taxon that one ?
(Q21991487,P703,Q83310)
action is_in
entity Q83310
action find
entity Q21991487
relation P703
['Q21991487', 'P703', 'Q83310']
ASK WHERE { resource:Q21991487 property:P703 resource:Q83310 }
Mus musculus Translocon-associated protein subunit gamma
action is_in
entity Mus musculus
action find
entity Translocon-associated protein subunit gamma
relation found in taxon
['Translocon-associated protein subunit gamma', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Translocon-associated_protein_subunit_gamma property:found_in_taxon resource:Mus_musculus }
[]
nutrient
SYSTEM
YES
(Q21991487,P703,Q83310)
action is_in
entity Q83310
action find
entity Q21991487
relation P703
[ANSWER]
['Q21991487', 'P703', 'Q83310']
ASK WHERE { resource:Q21991487 property:P703 resource:Q83310 }
Yes
action is_in
entity Mus musculus
action find
entity Translocon-associated protein subunit gamma
relation found in taxon
['Translocon-associated protein subunit gamma', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Translocon-associated_protein_subunit_gamma property:found_in_taxon resource:Mus_musculus }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q83310 Q737939
P144
Q15619164
USER
How many abstract beings are adapted from Mus musculus or Ken ?
(c(Q15619164),P144,Q83310) (c(Q15619164),P144,Q737939)
action count
action union
action filter_type
action find_reverse
entity Q83310
relation P144
type Q15619164
action filter_type
action find_reverse
entity Q737939
relation P144
type Q15619164
[{'concept': 'Q15619164'}, 'P144', 'Q83310'] [{'concept': 'Q15619164'}, 'P144', 'Q737939']
SELECT DISTINCT ( COUNT ( ?s ) AS ?u ) WHERE { VALUES ( ?p ) { ( resource:Q83310 ) ( resource:Q737939 ) } . ?s property:P144 ?p }
Mus musculus Ken
action count
action union
action filter_type
action find_reverse
entity Mus musculus
relation based on
type abstract being
action filter_type
action find_reverse
entity Ken
relation based on
type abstract being
[{'concept': 'abstract being'}, 'based on', 'Mus musculus'] [{'concept': 'abstract being'}, 'based on', 'Ken']
SELECT DISTINCT ( COUNT ( ?s ) AS ?u ) WHERE { VALUES ( ?p ) { ( resource:Mus_musculus ) ( resource:Ken ) } . ?s property:based_on ?p }
[]
abstract being
SYSTEM
2
Q9351 Q26807245
(c(Q15619164),P144,Q83310) (c(Q15619164),P144,Q737939)
action count
action union
action filter_type
action find_reverse
entity Q83310
relation P144
type Q15619164
action filter_type
action find_reverse
entity Q737939
relation P144
type Q15619164
[ANSWER]
[{'concept': 'Q15619164'}, 'P144', 'Q83310'] [{'concept': 'Q15619164'}, 'P144', 'Q737939']
SELECT DISTINCT ( COUNT ( ?s ) AS ?u ) WHERE { VALUES ( ?p ) { ( resource:Q83310 ) ( resource:Q737939 ) } . ?s property:P144 ?p }
Pikachu Ken
2
action count
action union
action filter_type
action find_reverse
entity Mus musculus
relation based on
type abstract being
action filter_type
action find_reverse
entity Ken
relation based on
type abstract being
[{'concept': 'abstract being'}, 'based on', 'Mus musculus'] [{'concept': 'abstract being'}, 'based on', 'Ken']
SELECT DISTINCT ( COUNT ( ?s ) AS ?u ) WHERE { VALUES ( ?p ) { ( resource:Mus_musculus ) ( resource:Ken ) } . ?s property:based_on ?p }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21990676
P688
Q863908
USER
Which nucleic acid sequence encodes Beta-tectorin ?
(c(Q863908),P688,Q21990676)
action filter_type
action find_reverse
entity Q21990676
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21990676']
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q863908 . ?t property:P688 resource:Q21990676 }
Beta-tectorin
action filter_type
action find_reverse
entity Beta-tectorin
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Beta-tectorin']
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:nucleic_acid_sequence . ?t property:encodes resource:Beta-tectorin }
[]
nucleic acid sequence
Q18254921
SYSTEM
Tectb
Q18254921
(c(Q863908),P688,Q21990676)
action filter_type
action find_reverse
entity Q21990676
relation P688
type Q863908
[ANSWER] encodes Beta-tectorin
[{'concept': 'Q863908'}, 'P688', 'Q21990676']
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q863908 . ?t property:P688 resource:Q21990676 }
Tectb
Tectb encodes Beta-tectorin
Tectb
action filter_type
action find_reverse
entity Beta-tectorin
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Beta-tectorin']
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:nucleic_acid_sequence . ?t property:encodes resource:Beta-tectorin }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18254921
P684
Q863908
USER
What is an otrhologus gene for that one ?
(Q18254921,P684,c(Q863908))
action filter_type
action find
entity Q18254921
relation P684
type Q863908
['Q18254921', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?d WHERE { resource:Q18254921 property:P684 ?d . ?d rdf:type ontology:Q863908 }
Tectb
action filter_type
action find
entity Tectb
relation ortholog
type nucleic acid sequence
['Tectb', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?d WHERE { resource:Tectb property:ortholog ?d . ?d rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18031909
SYSTEM
TECTB
Q18031909
(Q18254921,P684,c(Q863908))
action filter_type
action find
entity Q18254921
relation P684
type Q863908
An otrhologus gene for that one is a [ANSWER]
['Q18254921', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?d WHERE { resource:Q18254921 property:P684 ?d . ?d rdf:type ontology:Q863908 }
TECTB
An otrhologus gene for that one is a TECTB
TECTB
action filter_type
action find
entity Tectb
relation ortholog
type nucleic acid sequence
['Tectb', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?d WHERE { resource:Tectb property:ortholog ?d . ?d rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q21172487 Q21990676
P702
Q863908
USER
Which nucleic acid sequences are the gene that encodes Beta-tectorin or peptide chain release factor 2    CTL0719 ?
OR((Q21990676,P702,c(Q863908)), (Q21172487,P702,c(Q863908)))
action filter_type
action union
action find
entity Q21990676
relation P702
action find
entity Q21172487
relation P702
type Q863908
{'OR': [['Q21990676', 'P702', {'concept': 'Q863908'}], ['Q21172487', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:Q863908 . { { resource:Q21990676 property:P702 ?j } UNION { resource:Q21172487 property:P702 ?j } } }
peptide chain release factor 2    CTL0719 Beta-tectorin
action filter_type
action union
action find
entity Beta-tectorin
relation encoded by
action find
entity peptide chain release factor 2    CTL0719
relation encoded by
type nucleic acid sequence
{'OR': [['Beta-tectorin', 'encoded by', {'concept': 'nucleic acid sequence'}], ['peptide chain release factor 2    CTL0719', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:nucleic_acid_sequence . { { resource:Beta-tectorin property:encoded_by ?j } UNION { resource:peptide_chain_release_factor_2____CTL0719 property:encoded_by ?j } } }
[]
nucleic acid sequence
Q21280316 Q18254921
SYSTEM
peptide chain release factor 2    CTL0719, Tectb
Q21280316 Q18254921
OR((Q21990676,P702,c(Q863908)), (Q21172487,P702,c(Q863908)))
action filter_type
action union
action find
entity Q21990676
relation P702
action find
entity Q21172487
relation P702
type Q863908
[ANSWERS]
{'OR': [['Q21990676', 'P702', {'concept': 'Q863908'}], ['Q21172487', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:Q863908 . { { resource:Q21990676 property:P702 ?j } UNION { resource:Q21172487 property:P702 ?j } } }
peptide chain release factor 2    CTL0719 Tectb
And peptide chain release factor 2 CTL0719 and Tectb are the gene that encodes Beta-tectorin or peptide chain release factor 2 CTL0719
peptide chain release factor 2    CTL0719 Tectb
action filter_type
action union
action find
entity Beta-tectorin
relation encoded by
action find
entity peptide chain release factor 2    CTL0719
relation encoded by
type nucleic acid sequence
{'OR': [['Beta-tectorin', 'encoded by', {'concept': 'nucleic acid sequence'}], ['peptide chain release factor 2    CTL0719', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:nucleic_acid_sequence . { { resource:Beta-tectorin property:encoded_by ?j } UNION { resource:peptide_chain_release_factor_2____CTL0719 property:encoded_by ?j } } }
[]
Clarification
Quantitative|Count|Single entity type|Indirect
P688
Q181394
USER
How many nutrients do that nucleic acid sequence encode ?
(Q21280316,P688,c(Q181394))
['Q21280316', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q21172487 property:P688 ?z . ?z rdf:type ontology:Q181394 }
['peptide chain release factor 2    CTL0719', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:peptide_chain_release_factor_2____CTL0719 property:encodes ?z . ?z rdf:type ontology:nutrient }
[]
nutrient
Quantitative|Count|Single entity type|Clarification
Q21280316
SYSTEM
Did you mean peptide chain release factor 2    CTL0719 ?
(Q21280316,P688,c(Q181394)) (Q18254921,P688,c(Q181394))
[ANSWER]
['Q21280316', 'P688', {'concept': 'Q181394'}] ['Q18254921', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q21172487 property:P688 ?z . ?z rdf:type ontology:Q181394 }
Did you mean peptide chain release factor 2    CTL0719 ?
peptide chain release factor 2    CTL0719
['peptide chain release factor 2    CTL0719', 'encodes', {'concept': 'nutrient'}] ['Tectb', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:peptide_chain_release_factor_2____CTL0719 property:encodes ?z . ?z rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
USER
Yes
(Q21280316,P688,c(Q181394))
['Q21280316', 'P688', {'concept': 'Q181394'}]
['peptide chain release factor 2    CTL0719', 'encodes', {'concept': 'nutrient'}]
[]
SYSTEM
1
Q21172487
(Q21280316,P688,c(Q181394))
[ANSWER]
['Q21280316', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q21172487 property:P688 ?z . ?z rdf:type ontology:Q181394 }
peptide chain release factor 2    CTL0719
1
['peptide chain release factor 2    CTL0719', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:peptide_chain_release_factor_2____CTL0719 property:encodes ?z . ?z rdf:type ontology:nutrient }
[]