Simple Question (Direct)
Simple Question
Q23450702
P703
Q631147
USER
Where is putative two-component system sensor histidine kinase    BF2232 found ?
(Q23450702,P703,c(Q631147))
action filter_type
action find
entity Q23450702
relation P703
type Q631147
['Q23450702', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?n WHERE { resource:Q23450702 property:P703 ?n . ?n rdf:type ontology:Q631147 }
putative two-component system sensor histidine kinase    BF2232
action filter_type
action find
entity putative two-component system sensor histidine kinase    BF2232
relation found in taxon
type infraspecific name
['putative two-component system sensor histidine kinase    BF2232', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?n WHERE { resource:putative_two-component_system_sensor_histidine_kinase____BF2232 property:found_in_taxon ?n . ?n rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102950
SYSTEM
Bacteroides fragilis YCH46
Q21102950
(Q23450702,P703,c(Q631147))
action filter_type
action find
entity Q23450702
relation P703
type Q631147
Putative two-component system sensor histidine kinase BF2232 is found in [ANSWER]
['Q23450702', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?n WHERE { resource:Q23450702 property:P703 ?n . ?n rdf:type ontology:Q631147 }
Bacteroides fragilis YCH46
Putative two-component system sensor histidine kinase BF2232 is found in Bacteroides fragilis YCH46
Bacteroides fragilis YCH46
action filter_type
action find
entity putative two-component system sensor histidine kinase    BF2232
relation found in taxon
type infraspecific name
['putative two-component system sensor histidine kinase    BF2232', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?n WHERE { resource:putative_two-component_system_sensor_histidine_kinase____BF2232 property:found_in_taxon ?n . ?n rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23450702
P702
Q863908
USER
What encodes that nutrient ?
(Q21102950,P702,c(Q863908))
action filter_type
action find
entity Q23450702
relation P702
type Q863908
['Q21102950', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?z WHERE { resource:Q23450702 property:P702 ?z . ?z rdf:type ontology:Q863908 }
putative two-component system sensor histidine kinase    BF2232
action filter_type
action find
entity putative two-component system sensor histidine kinase    BF2232
relation encoded by
type nucleic acid sequence
['Bacteroides fragilis YCH46', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?z WHERE { resource:putative_two-component_system_sensor_histidine_kinase____BF2232 property:encoded_by ?z . ?z rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23106021
SYSTEM
putative two-component system sensor histidine kinase    BF2232
Q23106021
(Q21102950,P702,c(Q863908))
action filter_type
action find
entity Q23450702
relation P702
type Q863908
The putative two-component system sensor histidine kinase BF2232 encodes that nutrient
['Q21102950', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?z WHERE { resource:Q23450702 property:P702 ?z . ?z rdf:type ontology:Q863908 }
putative two-component system sensor histidine kinase    BF2232
The putative two-component system sensor histidine kinase BF2232 encodes that nutrient
putative two-component system sensor histidine kinase    BF2232
action filter_type
action find
entity putative two-component system sensor histidine kinase    BF2232
relation encoded by
type nucleic acid sequence
['Bacteroides fragilis YCH46', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?z WHERE { resource:putative_two-component_system_sensor_histidine_kinase____BF2232 property:encoded_by ?z . ?z rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23450702
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q23106021)
action filter_type
action find_reverse
entity Q23450702
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23106021']
SELECT DISTINCT ?y WHERE { ?y property:P688 resource:Q23450702 . ?y rdf:type ontology:Q863908 }
putative two-component system sensor histidine kinase    BF2232
action filter_type
action find_reverse
entity putative two-component system sensor histidine kinase    BF2232
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'putative two-component system sensor histidine kinase    BF2232']
SELECT DISTINCT ?y WHERE { ?y property:encodes resource:putative_two-component_system_sensor_histidine_kinase____BF2232 . ?y rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23106021
SYSTEM
putative two-component system sensor histidine kinase    BF2232
Q23106021
(c(Q863908),P688,Q23106021)
action filter_type
action find_reverse
entity Q23450702
relation P688
type Q863908
The putative two-component system sensor histidine kinase BF2232 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q23106021']
SELECT DISTINCT ?y WHERE { ?y property:P688 resource:Q23450702 . ?y rdf:type ontology:Q863908 }
putative two-component system sensor histidine kinase    BF2232
The putative two-component system sensor histidine kinase BF2232 encodes that nutrient
putative two-component system sensor histidine kinase    BF2232
action filter_type
action find_reverse
entity putative two-component system sensor histidine kinase    BF2232
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'putative two-component system sensor histidine kinase    BF2232']
SELECT DISTINCT ?y WHERE { ?y property:encodes resource:putative_two-component_system_sensor_histidine_kinase____BF2232 . ?y rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23450702
P681
Q15989253
USER
What is a component of that nutrient ?
(Q23106021,P681,c(Q15989253))
action filter_type
action find
entity Q23450702
relation P681
type Q15989253
['Q23106021', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?j WHERE { resource:Q23450702 property:P681 ?j . ?j rdf:type ontology:Q15989253 }
putative two-component system sensor histidine kinase    BF2232
action filter_type
action find
entity putative two-component system sensor histidine kinase    BF2232
relation cell component
type part
['putative two-component system sensor histidine kinase    BF2232', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?j WHERE { resource:putative_two-component_system_sensor_histidine_kinase____BF2232 property:cell_component ?j . ?j rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q23106021,P681,c(Q15989253))
action filter_type
action find
entity Q23450702
relation P681
type Q15989253
A component of that nutrient is a [ANSWER]
['Q23106021', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?j WHERE { resource:Q23450702 property:P681 ?j . ?j rdf:type ontology:Q15989253 }
membrane
A component of that nutrient is a membrane
membrane
action filter_type
action find
entity putative two-component system sensor histidine kinase    BF2232
relation cell component
type part
['putative two-component system sensor histidine kinase    BF2232', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?j WHERE { resource:putative_two-component_system_sensor_histidine_kinase____BF2232 property:cell_component ?j . ?j rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation|Incomplete
Q21495102 Q23450702
P681
Q15989253
USER
And also Multiple PDZ domain protein
AND((Q23450702,P681,c(Q15989253)), (Q21495102,P681,c(Q15989253)))
action filter_type
action intersection
action find
entity Q23450702
relation P681
action find
entity Q21495102
relation P681
type Q15989253
{'AND': [['Q23450702', 'P681', {'concept': 'Q15989253'}], ['Q21495102', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?w WHERE { resource:Q23450702 property:P681 ?w . resource:Q21495102 property:P681 ?w . ?w rdf:type ontology:Q15989253 }
Multiple PDZ domain protein putative two-component system sensor histidine kinase    BF2232
action filter_type
action intersection
action find
entity putative two-component system sensor histidine kinase    BF2232
relation cell component
action find
entity Multiple PDZ domain protein
relation cell component
type part
{'AND': [['putative two-component system sensor histidine kinase    BF2232', 'cell component', {'concept': 'part'}], ['Multiple PDZ domain protein', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?w WHERE { resource:putative_two-component_system_sensor_histidine_kinase____BF2232 property:cell_component ?w . resource:Multiple_PDZ_domain_protein property:cell_component ?w . ?w rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
AND((Q23450702,P681,c(Q15989253)), (Q21495102,P681,c(Q15989253)))
action filter_type
action intersection
action find
entity Q23450702
relation P681
action find
entity Q21495102
relation P681
type Q15989253
[ANSWER]
{'AND': [['Q23450702', 'P681', {'concept': 'Q15989253'}], ['Q21495102', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?w WHERE { resource:Q23450702 property:P681 ?w . resource:Q21495102 property:P681 ?w . ?w rdf:type ontology:Q15989253 }
membrane
membrane
action filter_type
action intersection
action find
entity putative two-component system sensor histidine kinase    BF2232
relation cell component
action find
entity Multiple PDZ domain protein
relation cell component
type part
{'AND': [['putative two-component system sensor histidine kinase    BF2232', 'cell component', {'concept': 'part'}], ['Multiple PDZ domain protein', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?w WHERE { resource:putative_two-component_system_sensor_histidine_kinase____BF2232 property:cell_component ?w . resource:Multiple_PDZ_domain_protein property:cell_component ?w . ?w rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21495102
P682
Q2996394
USER
Which biological process is Multiple PDZ domain protein involved in ?
(Q21495102,P682,c(Q2996394))
action filter_type
action find
entity Q21495102
relation P682
type Q2996394
['Q21495102', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?r WHERE { resource:Q21495102 property:P682 ?r . ?r rdf:type ontology:Q2996394 }
Multiple PDZ domain protein
action filter_type
action find
entity Multiple PDZ domain protein
relation biological process
type biological process
['Multiple PDZ domain protein', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?r WHERE { resource:Multiple_PDZ_domain_protein property:biological_process ?r . ?r rdf:type ontology:biological_process }
[]
biological process
Q187640
SYSTEM
cell adhesion
Q187640
(Q21495102,P682,c(Q2996394))
action filter_type
action find
entity Q21495102
relation P682
type Q2996394
Multiple PDZ domain protein is the [ANSWER]
['Q21495102', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?r WHERE { resource:Q21495102 property:P682 ?r . ?r rdf:type ontology:Q2996394 }
cell adhesion
Multiple PDZ domain protein is the cell adhesion
cell adhesion
action filter_type
action find
entity Multiple PDZ domain protein
relation biological process
type biological process
['Multiple PDZ domain protein', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?r WHERE { resource:Multiple_PDZ_domain_protein property:biological_process ?r . ?r rdf:type ontology:biological_process }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Indirect
P682
Q2996394 Q181394
USER
Which biological processes are greater number of nutrients involved in than that biological process ?
(c(Q181394),P682,c(Q2996394))
action greater
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
action count
action filter_type
action find
entity Q187640
relation P682
type Q2996394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ?p ( COUNT ( ?i ) AS ?m ) WHERE { ?p rdf:type ontology:Q2996394 . ?i rdf:type ontology:Q181394 . ?i property:P682 ?p } GROUP BY ?p } . FILTER ( ?m > ?f ) . { SELECT DISTINCT ( COUNT ( ?l ) AS ?f ) WHERE { resource:Q187640 property:P682 ?l . ?l rdf:type ontology:Q2996394 } } }
action greater
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
action count
action filter_type
action find
entity cell adhesion
relation biological process
type biological process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ?p ( COUNT ( ?i ) AS ?m ) WHERE { ?p rdf:type ontology:biological_process . ?i rdf:type ontology:nutrient . ?i property:biological_process ?p } GROUP BY ?p } . FILTER ( ?m > ?f ) . { SELECT DISTINCT ( COUNT ( ?l ) AS ?f ) WHERE { resource:cell_adhesion property:biological_process ?l . ?l rdf:type ontology:biological_process } } }
[]
biological process nutrient
Q518328 Q14914008
SYSTEM
methylation, biosynthetic process
Q518328 Q14914008
(c(Q181394),P682,c(Q2996394))
action greater
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
action count
action filter_type
action find
entity Q187640
relation P682
type Q2996394
[ANSWERS] are greater number of nutrients involved in than that biological process
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ?p ( COUNT ( ?i ) AS ?m ) WHERE { ?p rdf:type ontology:Q2996394 . ?i rdf:type ontology:Q181394 . ?i property:P682 ?p } GROUP BY ?p } . FILTER ( ?m > ?f ) . { SELECT DISTINCT ( COUNT ( ?l ) AS ?f ) WHERE { resource:Q187640 property:P682 ?l . ?l rdf:type ontology:Q2996394 } } }
methylation biosynthetic process
Methylation and biosynthetic process are greater number of nutrients involved in than that biological process
methylation biosynthetic process
action greater
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
action count
action filter_type
action find
entity cell adhesion
relation biological process
type biological process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ?p ( COUNT ( ?i ) AS ?m ) WHERE { ?p rdf:type ontology:biological_process . ?i rdf:type ontology:nutrient . ?i property:biological_process ?p } GROUP BY ?p } . FILTER ( ?m > ?f ) . { SELECT DISTINCT ( COUNT ( ?l ) AS ?f ) WHERE { resource:cell_adhesion property:biological_process ?l . ?l rdf:type ontology:biological_process } } }
[]