Simple Question (Direct)
Simple Question
Q23440316
P680
Q44424
USER
Which the chemical bond that represents the molecular function of arylsulfatase regulator    VPA0601 ?
(Q23440316,P680,c(Q44424))
action filter_type
action find
entity Q23440316
relation P680
type Q44424
['Q23440316', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?b WHERE { resource:Q23440316 property:P680 ?b . ?b rdf:type ontology:Q44424 }
arylsulfatase regulator    VPA0601
action filter_type
action find
entity arylsulfatase regulator    VPA0601
relation molecular function
type chemical bond
['arylsulfatase regulator    VPA0601', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?b WHERE { resource:arylsulfatase_regulator____VPA0601 property:molecular_function ?b . ?b rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380
SYSTEM
metal ion binding
Q13667380
(Q23440316,P680,c(Q44424))
action filter_type
action find
entity Q23440316
relation P680
type Q44424
Represents of [ANSWER]
['Q23440316', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?b WHERE { resource:Q23440316 property:P680 ?b . ?b rdf:type ontology:Q44424 }
metal ion binding
Represents of metal ion binding
metal ion binding
action filter_type
action find
entity arylsulfatase regulator    VPA0601
relation molecular function
type chemical bond
['arylsulfatase regulator    VPA0601', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?b WHERE { resource:arylsulfatase_regulator____VPA0601 property:molecular_function ?b . ?b rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23440316
P682
Q1057
USER
Which metabolic process is arylsulfatase regulator    VPA0601 involved in ?
(Q23440316,P682,c(Q1057))
action filter_type
action find
entity Q23440316
relation P682
type Q1057
['Q23440316', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?a WHERE { resource:Q23440316 property:P682 ?a . ?a rdf:type ontology:Q1057 }
arylsulfatase regulator    VPA0601
action filter_type
action find
entity arylsulfatase regulator    VPA0601
relation biological process
type metabolic process
['arylsulfatase regulator    VPA0601', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?a WHERE { resource:arylsulfatase_regulator____VPA0601 property:biological_process ?a . ?a rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q23440316,P682,c(Q1057))
action filter_type
action find
entity Q23440316
relation P682
type Q1057
The [ANSWER] is arylsulfatase regulator VPA0601 involved in
['Q23440316', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?a WHERE { resource:Q23440316 property:P682 ?a . ?a rdf:type ontology:Q1057 }
oxidation-reduction process
The oxidation-reduction process is arylsulfatase regulator VPA0601 involved in
oxidation-reduction process
action filter_type
action find
entity arylsulfatase regulator    VPA0601
relation biological process
type metabolic process
['arylsulfatase regulator    VPA0601', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?a WHERE { resource:arylsulfatase_regulator____VPA0601 property:biological_process ?a . ?a rdf:type ontology:metabolic_process }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23440316
P702
Q863908
USER
Which gene encodes arylsulfatase regulator    VPA0601 ?
(Q23440316,P702,c(Q863908))
action filter_type
action find
entity Q23440316
relation P702
type Q863908
['Q23440316', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:Q863908 . resource:Q23440316 property:P702 ?z }
arylsulfatase regulator    VPA0601
action filter_type
action find
entity arylsulfatase regulator    VPA0601
relation encoded by
type nucleic acid sequence
['arylsulfatase regulator    VPA0601', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:nucleic_acid_sequence . resource:arylsulfatase_regulator____VPA0601 property:encoded_by ?z }
[]
nucleic acid sequence
Q23157245
SYSTEM
arylsulfatase regulator    VPA0601
Q23157245
(Q23440316,P702,c(Q863908))
action filter_type
action find
entity Q23440316
relation P702
type Q863908
Arylsulfatase regulator VPA0601 encodes arylsulfatase regulator VPA0601
['Q23440316', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:Q863908 . resource:Q23440316 property:P702 ?z }
arylsulfatase regulator    VPA0601
Arylsulfatase regulator VPA0601 encodes arylsulfatase regulator VPA0601
arylsulfatase regulator    VPA0601
action filter_type
action find
entity arylsulfatase regulator    VPA0601
relation encoded by
type nucleic acid sequence
['arylsulfatase regulator    VPA0601', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:nucleic_acid_sequence . resource:arylsulfatase_regulator____VPA0601 property:encoded_by ?z }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23487112
Q863908
USER
And what about ribonuclease HIII    SSA_0352?
(Q23487112,P702,c(Q863908))
action filter_type
action find
entity Q23487112
relation P702
type Q863908
['Q23487112', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?u WHERE { resource:Q23487112 property:P702 ?u . ?u rdf:type ontology:Q863908 }
ribonuclease HIII    SSA_0352
action filter_type
action find
entity ribonuclease HIII    SSA_0352
relation encoded by
type nucleic acid sequence
['ribonuclease HIII    SSA_0352', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?u WHERE { resource:ribonuclease_HIII____SSA_0352 property:encoded_by ?u . ?u rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23402973
SYSTEM
ribonuclease HIII    SSA_0352
Q23402973
(Q23487112,P702,c(Q863908))
action filter_type
action find
entity Q23487112
relation P702
type Q863908
[ANSWER]
['Q23487112', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?u WHERE { resource:Q23487112 property:P702 ?u . ?u rdf:type ontology:Q863908 }
ribonuclease HIII    SSA_0352
ribonuclease HIII    SSA_0352
action filter_type
action find
entity ribonuclease HIII    SSA_0352
relation encoded by
type nucleic acid sequence
['ribonuclease HIII    SSA_0352', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?u WHERE { resource:ribonuclease_HIII____SSA_0352 property:encoded_by ?u . ?u rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23487112
P703
Q16521
USER
Which taxon is that nutrient found in ?
(Q23402973,P703,c(Q16521))
action filter_type
action find
entity Q23487112
relation P703
type Q16521
['Q23402973', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?x WHERE { resource:Q23487112 property:P703 ?x . ?x rdf:type ontology:Q16521 }
ribonuclease HIII    SSA_0352
action filter_type
action find
entity ribonuclease HIII    SSA_0352
relation found in taxon
type taxon
['ribonuclease HIII    SSA_0352', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?x WHERE { resource:ribonuclease_HIII____SSA_0352 property:found_in_taxon ?x . ?x rdf:type ontology:taxon }
[]
taxon
Q21399278
SYSTEM
Streptococcus sanguinis SK36
Q21399278
(Q23402973,P703,c(Q16521))
action filter_type
action find
entity Q23487112
relation P703
type Q16521
That nutrient is found in [ANSWER]
['Q23402973', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?x WHERE { resource:Q23487112 property:P703 ?x . ?x rdf:type ontology:Q16521 }
Streptococcus sanguinis SK36
That nutrient is found in Streptococcus sanguinis SK36
Streptococcus sanguinis SK36
action filter_type
action find
entity ribonuclease HIII    SSA_0352
relation found in taxon
type taxon
['ribonuclease HIII    SSA_0352', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?x WHERE { resource:ribonuclease_HIII____SSA_0352 property:found_in_taxon ?x . ?x rdf:type ontology:taxon }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23402973
P688
Q181394
USER
What does ribonuclease HIII    SSA_0352 encode ?
(Q23402973,P688,c(Q181394))
action filter_type
action find
entity Q23402973
relation P688
type Q181394
['Q23402973', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?m WHERE { resource:Q23402973 property:P688 ?m . ?m rdf:type ontology:Q181394 }
ribonuclease HIII    SSA_0352
action filter_type
action find
entity ribonuclease HIII    SSA_0352
relation encodes
type nutrient
['ribonuclease HIII    SSA_0352', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?m WHERE { resource:ribonuclease_HIII____SSA_0352 property:encodes ?m . ?m rdf:type ontology:nutrient }
[]
nutrient
Q23487112
SYSTEM
ribonuclease HIII    SSA_0352
Q23487112
(Q23402973,P688,c(Q181394))
action filter_type
action find
entity Q23402973
relation P688
type Q181394
Ribonuclease HIII SSA_0352 encodes the ribonuclease HIII SSA 0352
['Q23402973', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?m WHERE { resource:Q23402973 property:P688 ?m . ?m rdf:type ontology:Q181394 }
ribonuclease HIII    SSA_0352
Ribonuclease HIII SSA_0352 encodes the ribonuclease HIII SSA 0352
ribonuclease HIII    SSA_0352
action filter_type
action find
entity ribonuclease HIII    SSA_0352
relation encodes
type nutrient
['ribonuclease HIII    SSA_0352', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?m WHERE { resource:ribonuclease_HIII____SSA_0352 property:encodes ?m . ?m rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q23487112 Q13667380
P680
Q44424
USER
Does metal ion binding represent molecular function of ribonuclease HIII    SSA_0352 ?
(Q23487112,P680,Q13667380)
action is_in
entity Q13667380
action find
entity Q23487112
relation P680
['Q23487112', 'P680', 'Q13667380']
ASK WHERE { resource:Q23487112 property:P680 resource:Q13667380 }
ribonuclease HIII    SSA_0352 metal ion binding
action is_in
entity metal ion binding
action find
entity ribonuclease HIII    SSA_0352
relation molecular function
['ribonuclease HIII    SSA_0352', 'molecular function', 'metal ion binding']
ASK WHERE { resource:ribonuclease_HIII____SSA_0352 property:molecular_function resource:metal_ion_binding }
[]
chemical bond
SYSTEM
YES
(Q23487112,P680,Q13667380)
action is_in
entity Q13667380
action find
entity Q23487112
relation P680
[ANSWER]
['Q23487112', 'P680', 'Q13667380']
ASK WHERE { resource:Q23487112 property:P680 resource:Q13667380 }
Yes
action is_in
entity metal ion binding
action find
entity ribonuclease HIII    SSA_0352
relation molecular function
['ribonuclease HIII    SSA_0352', 'molecular function', 'metal ion binding']
ASK WHERE { resource:ribonuclease_HIII____SSA_0352 property:molecular_function resource:metal_ion_binding }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23487112 Q23466591
P688
Q863908
USER
How many nucleic acid sequences encode ribonuclease HIII    SSA_0352 or glycosyl transferase family protein    Rru_A2737 ?
(c(Q863908),P688,Q23487112) (c(Q863908),P688,Q23466591)
action count
action union
action filter_type
action find_reverse
entity Q23487112
relation P688
type Q863908
action filter_type
action find_reverse
entity Q23466591
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23487112'] [{'concept': 'Q863908'}, 'P688', 'Q23466591']
SELECT DISTINCT ( COUNT ( ?r ) AS ?z ) WHERE { { ?r property:P688 resource:Q23466591 . ?r rdf:type ontology:Q863908 } UNION { ?r rdf:type ontology:Q863908 . ?r property:P688 resource:Q23487112 } }
ribonuclease HIII    SSA_0352 glycosyl transferase family protein    Rru_A2737
action count
action union
action filter_type
action find_reverse
entity ribonuclease HIII    SSA_0352
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity glycosyl transferase family protein    Rru_A2737
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ribonuclease HIII    SSA_0352'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'glycosyl transferase family protein    Rru_A2737']
SELECT DISTINCT ( COUNT ( ?r ) AS ?z ) WHERE { { ?r property:encodes resource:glycosyl_transferase_family_protein____Rru_A2737 . ?r rdf:type ontology:nucleic_acid_sequence } UNION { ?r rdf:type ontology:nucleic_acid_sequence . ?r property:encodes resource:ribonuclease_HIII____SSA_0352 } }
[]
nucleic acid sequence
SYSTEM
2
Q23402973 Q23374292
(c(Q863908),P688,Q23487112) (c(Q863908),P688,Q23466591)
action count
action union
action filter_type
action find_reverse
entity Q23487112
relation P688
type Q863908
action filter_type
action find_reverse
entity Q23466591
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q23487112'] [{'concept': 'Q863908'}, 'P688', 'Q23466591']
SELECT DISTINCT ( COUNT ( ?r ) AS ?z ) WHERE { { ?r property:P688 resource:Q23466591 . ?r rdf:type ontology:Q863908 } UNION { ?r rdf:type ontology:Q863908 . ?r property:P688 resource:Q23487112 } }
ribonuclease HIII    SSA_0352 glycosyl transferase family protein    Rru_A2737
2
action count
action union
action filter_type
action find_reverse
entity ribonuclease HIII    SSA_0352
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity glycosyl transferase family protein    Rru_A2737
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ribonuclease HIII    SSA_0352'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'glycosyl transferase family protein    Rru_A2737']
SELECT DISTINCT ( COUNT ( ?r ) AS ?z ) WHERE { { ?r property:encodes resource:glycosyl_transferase_family_protein____Rru_A2737 . ?r rdf:type ontology:nucleic_acid_sequence } UNION { ?r rdf:type ontology:nucleic_acid_sequence . ?r property:encodes resource:ribonuclease_HIII____SSA_0352 } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23487112
P681
Q15989253
USER
Which part is a component of ribonuclease HIII    SSA_0352 ?
(Q23487112,P681,c(Q15989253))
action filter_type
action find
entity Q23487112
relation P681
type Q15989253
['Q23487112', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { resource:Q23487112 property:P681 ?h . ?h rdf:type ontology:Q15989253 }
ribonuclease HIII    SSA_0352
action filter_type
action find
entity ribonuclease HIII    SSA_0352
relation cell component
type part
['ribonuclease HIII    SSA_0352', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { resource:ribonuclease_HIII____SSA_0352 property:cell_component ?h . ?h rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23487112,P681,c(Q15989253))
action filter_type
action find
entity Q23487112
relation P681
type Q15989253
The [ANSWER] is a component of ribonuclease HIII SSA_0352
['Q23487112', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { resource:Q23487112 property:P681 ?h . ?h rdf:type ontology:Q15989253 }
cytoplasm
The cytoplasm is a component of ribonuclease HIII SSA_0352
cytoplasm
action filter_type
action find
entity ribonuclease HIII    SSA_0352
relation cell component
type part
['ribonuclease HIII    SSA_0352', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { resource:ribonuclease_HIII____SSA_0352 property:cell_component ?h . ?h rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q27548070
Q15989253
USER
And also tell me about translation initiation factor 6 YPR016C?
(Q27548070,P681,c(Q15989253))
action filter_type
action find
entity Q27548070
relation P681
type Q15989253
['Q27548070', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?u WHERE { resource:Q27548070 property:P681 ?u . ?u rdf:type ontology:Q15989253 }
translation initiation factor 6 YPR016C
action filter_type
action find
entity translation initiation factor 6 YPR016C
relation cell component
type part
['translation initiation factor 6 YPR016C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?u WHERE { resource:translation_initiation_factor_6_YPR016C property:cell_component ?u . ?u rdf:type ontology:part }
[]
part
Q79899 Q40260
SYSTEM
cytoplasm, nucleus
Q79899 Q40260
(Q27548070,P681,c(Q15989253))
action filter_type
action find
entity Q27548070
relation P681
type Q15989253
[ANSWERS]
['Q27548070', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?u WHERE { resource:Q27548070 property:P681 ?u . ?u rdf:type ontology:Q15989253 }
cytoplasm nucleus
cytoplasm nucleus
action filter_type
action find
entity translation initiation factor 6 YPR016C
relation cell component
type part
['translation initiation factor 6 YPR016C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?u WHERE { resource:translation_initiation_factor_6_YPR016C property:cell_component ?u . ?u rdf:type ontology:part }
[]