Simple Question (Direct)
Simple Question
Q27549499
P681
Q5058355
USER
Which cellular components are components of phosphatidate cytidylyltransferase YBR029C ?
(Q27549499,P681,c(Q5058355))
action filter_type
action find
entity Q27549499
relation P681
type Q5058355
['Q27549499', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?n WHERE { resource:Q27549499 property:P681 ?n . ?n rdf:type ontology:Q5058355 }
phosphatidate cytidylyltransferase YBR029C
action filter_type
action find
entity phosphatidate cytidylyltransferase YBR029C
relation cell component
type cellular component
['phosphatidate cytidylyltransferase YBR029C', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?n WHERE { resource:phosphatidate_cytidylyltransferase_YBR029C property:cell_component ?n . ?n rdf:type ontology:cellular_component }
[]
cellular component
Q79927 Q14329032
SYSTEM
endoplasmic reticulum, endoplasmic reticulum membrane
Q79927 Q14329032
(Q27549499,P681,c(Q5058355))
action filter_type
action find
entity Q27549499
relation P681
type Q5058355
[ANSWERS] are components of phosphatidate cytidylyltransferase YBR029C
['Q27549499', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?n WHERE { resource:Q27549499 property:P681 ?n . ?n rdf:type ontology:Q5058355 }
endoplasmic reticulum endoplasmic reticulum membrane
Endoplasmic reticulum and endoplasmic reticulum membrane are components of phosphatidate cytidylyltransferase YBR029C
endoplasmic reticulum endoplasmic reticulum membrane
action filter_type
action find
entity phosphatidate cytidylyltransferase YBR029C
relation cell component
type cellular component
['phosphatidate cytidylyltransferase YBR029C', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?n WHERE { resource:phosphatidate_cytidylyltransferase_YBR029C property:cell_component ?n . ?n rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q79927 Q14329032
P361
Q5058355
USER
Which cellular components are a component of endoplasmic reticulum and endoplasmic reticulum membrane ?
(c(Q5058355),P361,Q79927) (c(Q5058355),P361,Q14329032)
action union
action filter_type
action find_reverse
entity Q79927
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q14329032
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', 'Q79927'] [{'concept': 'Q5058355'}, 'P361', 'Q14329032']
SELECT DISTINCT ?i WHERE { { ?i property:P361 resource:Q79927 . ?i rdf:type ontology:Q5058355 } UNION { ?i property:P361 resource:Q14329032 . ?i rdf:type ontology:Q5058355 } }
endoplasmic reticulum endoplasmic reticulum membrane
action union
action filter_type
action find_reverse
entity endoplasmic reticulum
relation part of
type cellular component
action filter_type
action find_reverse
entity endoplasmic reticulum membrane
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'endoplasmic reticulum'] [{'concept': 'cellular component'}, 'part of', 'endoplasmic reticulum membrane']
SELECT DISTINCT ?i WHERE { { ?i property:part_of resource:endoplasmic_reticulum . ?i rdf:type ontology:cellular_component } UNION { ?i property:part_of resource:endoplasmic_reticulum_membrane . ?i rdf:type ontology:cellular_component } }
[]
cellular component
Q21107992 Q21107992 Q22326802
SYSTEM
endoplasmic reticulum palmitoyltransferase complex for 3rd, ER ubiquitin ligase complex for 1st, 2nd
Q21107992 Q21107992 Q22326802 Q21469807 Q21971286 Q21115425 Q22326943
(c(Q5058355),P361,Q79927) (c(Q5058355),P361,Q14329032)
action union
action filter_type
action find_reverse
entity Q79927
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q14329032
relation P361
type Q5058355
[ANSWERS]
[{'concept': 'Q5058355'}, 'P361', 'Q79927'] [{'concept': 'Q5058355'}, 'P361', 'Q14329032']
SELECT DISTINCT ?i WHERE { { ?i property:P361 resource:Q79927 . ?i rdf:type ontology:Q5058355 } UNION { ?i property:P361 resource:Q14329032 . ?i rdf:type ontology:Q5058355 } }
ER ubiquitin ligase complex ER ubiquitin ligase complex endoplasmic reticulum palmitoyltransferase complex dolichyl-phosphate-mannose-protein mannosyltransferase complex oligosaccharyltransferase complex Ire1 complex fatty acid elongase complex
ER ubiquitin ligase complex, ER ubiquitin ligase complex and endoplasmic reticulum palmitoyltransferase complex are a component of endoplasmic reticulum and endoplasmic reticulum membrane
ER ubiquitin ligase complex ER ubiquitin ligase complex endoplasmic reticulum palmitoyltransferase complex
action union
action filter_type
action find_reverse
entity endoplasmic reticulum
relation part of
type cellular component
action filter_type
action find_reverse
entity endoplasmic reticulum membrane
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'endoplasmic reticulum'] [{'concept': 'cellular component'}, 'part of', 'endoplasmic reticulum membrane']
SELECT DISTINCT ?i WHERE { { ?i property:part_of resource:endoplasmic_reticulum . ?i rdf:type ontology:cellular_component } UNION { ?i property:part_of resource:endoplasmic_reticulum_membrane . ?i rdf:type ontology:cellular_component } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27549499
P688
Q863908
USER
Which nucleic acid sequence encodes phosphatidate cytidylyltransferase YBR029C ?
(c(Q863908),P688,Q27549499)
action filter_type
action find_reverse
entity Q27549499
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27549499']
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q863908 . ?t property:P688 resource:Q27549499 }
phosphatidate cytidylyltransferase YBR029C
action filter_type
action find_reverse
entity phosphatidate cytidylyltransferase YBR029C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'phosphatidate cytidylyltransferase YBR029C']
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:nucleic_acid_sequence . ?t property:encodes resource:phosphatidate_cytidylyltransferase_YBR029C }
[]
nucleic acid sequence
Q27542401
SYSTEM
phosphatidate cytidylyltransferase YBR029C
Q27542401
(c(Q863908),P688,Q27549499)
action filter_type
action find_reverse
entity Q27549499
relation P688
type Q863908
[ANSWER] encodes [ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q27549499']
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q863908 . ?t property:P688 resource:Q27549499 }
phosphatidate cytidylyltransferase YBR029C
Phosphatidate cytidylyltransferase YBR029C encodes phosphatidate cytidylyltransferase YBR029C
phosphatidate cytidylyltransferase YBR029C
action filter_type
action find_reverse
entity phosphatidate cytidylyltransferase YBR029C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'phosphatidate cytidylyltransferase YBR029C']
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:nucleic_acid_sequence . ?t property:encodes resource:phosphatidate_cytidylyltransferase_YBR029C }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27542401
P703
Q631147
USER
Which taxon does that nucleic acid sequence belong to ?
(Q27542401,P703,c(Q631147))
action filter_type
action find
entity Q27542401
relation P703
type Q631147
['Q27542401', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?a WHERE { resource:Q27542401 property:P703 ?a . ?a rdf:type ontology:Q631147 }
phosphatidate cytidylyltransferase YBR029C
action filter_type
action find
entity phosphatidate cytidylyltransferase YBR029C
relation found in taxon
type infraspecific name
['phosphatidate cytidylyltransferase YBR029C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?a WHERE { resource:phosphatidate_cytidylyltransferase_YBR029C property:found_in_taxon ?a . ?a rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27542401,P703,c(Q631147))
action filter_type
action find
entity Q27542401
relation P703
type Q631147
That nucleic acid sequence belongs to [ANSWER]
['Q27542401', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?a WHERE { resource:Q27542401 property:P703 ?a . ?a rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
That nucleic acid sequence belongs to Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
action filter_type
action find
entity phosphatidate cytidylyltransferase YBR029C
relation found in taxon
type infraspecific name
['phosphatidate cytidylyltransferase YBR029C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?a WHERE { resource:phosphatidate_cytidylyltransferase_YBR029C property:found_in_taxon ?a . ?a rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27542401
P702
Q181394
USER
What is the gene that is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q27510868)
action filter_type
action find_reverse
entity Q27542401
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q27510868']
SELECT DISTINCT ?r WHERE { ?r property:P702 resource:Q27542401 . ?r rdf:type ontology:Q181394 }
phosphatidate cytidylyltransferase YBR029C
action filter_type
action find_reverse
entity phosphatidate cytidylyltransferase YBR029C
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Saccharomyces cerevisiae S288c']
SELECT DISTINCT ?r WHERE { ?r property:encoded_by resource:phosphatidate_cytidylyltransferase_YBR029C . ?r rdf:type ontology:nutrient }
[]
nutrient
Q27549499
SYSTEM
phosphatidate cytidylyltransferase YBR029C
Q27549499
(c(Q181394),P702,Q27510868)
action filter_type
action find_reverse
entity Q27542401
relation P702
type Q181394
The gene that is encoded by that nucleic acid sequence is [ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q27510868']
SELECT DISTINCT ?r WHERE { ?r property:P702 resource:Q27542401 . ?r rdf:type ontology:Q181394 }
phosphatidate cytidylyltransferase YBR029C
The gene that is encoded by that nucleic acid sequence is phosphatidate cytidylyltransferase YBR029C
phosphatidate cytidylyltransferase YBR029C
action filter_type
action find_reverse
entity phosphatidate cytidylyltransferase YBR029C
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Saccharomyces cerevisiae S288c']
SELECT DISTINCT ?r WHERE { ?r property:encoded_by resource:phosphatidate_cytidylyltransferase_YBR029C . ?r rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q27549499 Q27510868 Q16993279
P703
Q631147
USER
Does phosphatidate cytidylyltransferase YBR029C specy belongs to the taxon Saccharomyces cerevisiae S288c and Ulmus 'Amsterdam' ?
(Q27549499,P703,Q27510868) (Q27549499,P703,Q16993279)
action is_in
entity Q27549499
action intersection
action find_reverse
entity Q27510868
relation P703
action find_reverse
entity Q16993279
relation P703
['Q27549499', 'P703', 'Q27510868'] ['Q27549499', 'P703', 'Q16993279']
ASK WHERE { resource:Q27549499 property:P703 resource:Q27510868 . resource:Q27549499 property:P703 resource:Q16993279 }
phosphatidate cytidylyltransferase YBR029C Saccharomyces cerevisiae S288c Ulmus 'Amsterdam'
action is_in
entity phosphatidate cytidylyltransferase YBR029C
action intersection
action find_reverse
entity Saccharomyces cerevisiae S288c
relation found in taxon
action find_reverse
entity Ulmus 'Amsterdam'
relation found in taxon
['phosphatidate cytidylyltransferase YBR029C', 'found in taxon', 'Saccharomyces cerevisiae S288c'] ['phosphatidate cytidylyltransferase YBR029C', 'found in taxon', "Ulmus 'Amsterdam'"]
ASK WHERE { resource:phosphatidate_cytidylyltransferase_YBR029C property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c . resource:phosphatidate_cytidylyltransferase_YBR029C property:found_in_taxon resource:Ulmus_'Amsterdam' }
[]
infraspecific name
SYSTEM
YES and NO respectively
(Q27549499,P703,Q27510868) (Q27549499,P703,Q16993279)
action is_in
entity Q27549499
action intersection
action find_reverse
entity Q27510868
relation P703
action find_reverse
entity Q16993279
relation P703
[ANSWER]
['Q27549499', 'P703', 'Q27510868'] ['Q27549499', 'P703', 'Q16993279']
ASK WHERE { resource:Q27549499 property:P703 resource:Q27510868 . resource:Q27549499 property:P703 resource:Q16993279 }
YES and NO respectively
action is_in
entity phosphatidate cytidylyltransferase YBR029C
action intersection
action find_reverse
entity Saccharomyces cerevisiae S288c
relation found in taxon
action find_reverse
entity Ulmus 'Amsterdam'
relation found in taxon
['phosphatidate cytidylyltransferase YBR029C', 'found in taxon', 'Saccharomyces cerevisiae S288c'] ['phosphatidate cytidylyltransferase YBR029C', 'found in taxon', "Ulmus 'Amsterdam'"]
ASK WHERE { resource:phosphatidate_cytidylyltransferase_YBR029C property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c . resource:phosphatidate_cytidylyltransferase_YBR029C property:found_in_taxon resource:Ulmus_'Amsterdam' }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q22327413
P361
Q5058355 Q223557 Q5058355
USER
Which cellular components are a component of approximately the same number of cellular components and physical objects as extrahaustorial matrix ?
(c(Q5058355),P361,c(Q5058355)|c(Q223557))
action approx
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q223557
action count
action filter_multi_types
action find
entity Q22327413
relation P361
type Q5058355
type Q223557
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q223557'}]]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?x ) AS ?p ) ?t WHERE { VALUES ( ?f ) { ( ontology:Q223557 ) ( ontology:Q5058355 ) } . ?x rdf:type ?f } GROUP BY ?t } . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { { { ?o rdf:type ontology:Q5058355 } UNION { ?o rdf:type ontology:Q223557 } } . resource:Q22327413 property:P361 ?o } } . FILTER ( ?p = ?r ) }
extrahaustorial matrix
action approx
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type physical object
action count
action filter_multi_types
action find
entity extrahaustorial matrix
relation part of
type cellular component
type physical object
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'physical object'}]]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?x ) AS ?p ) ?t WHERE { VALUES ( ?f ) { ( ontology:physical_object ) ( ontology:cellular_component ) } . ?x rdf:type ?f } GROUP BY ?t } . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { { { ?o rdf:type ontology:cellular_component } UNION { ?o rdf:type ontology:physical_object } } . resource:extrahaustorial_matrix property:part_of ?o } } . FILTER ( ?p = ?r ) }
[]
cellular component physical object cellular component
Q22328601 Q24576568 Q24576567
SYSTEM
H-NS complex, extracellular matrix of synaptic cleft, perisynaptic extracellular matrix
Q22327293 Q14329032 Q22327448 Q21116315 Q14876131 Q14878067 Q22327403 Q14864977 Q22327994 Q22327995 Q22327623 Q22327621 Q21116899 Q14860843 Q22327688 Q22327687 Q22327473 Q22329449 Q22327447 Q26253880 Q24576568 Q24576567 Q22330482 Q22325973 Q22326870 Q671136 Q22326873 Q21469807 Q22325381 Q24576572 Q22327513 Q22325480 Q21120634 Q3824358 Q22329021 Q21120639 Q22328085 Q22328655 Q22329861 Q22329866 Q22329864 Q22330033 Q22328495 Q22326802 Q22329161 Q22329160 Q22327284 Q22330462 Q22327411 Q22327413 Q22327412 Q22327419 Q22329158 Q21109092 Q14864382 Q22329157 Q22329857 Q22329856 Q22329855 Q22329854 Q22329852 Q24570696 Q22326943 Q21136996 Q22329858 Q14906187 Q22327494 Q22327529 Q22327407 Q22327654 Q22327653 Q22327524 Q22329849 Q22329847 Q21971414 Q21095089 Q22327498 Q22330052 Q22330059 Q22327493 Q22325375 Q24576587 Q21108411 Q22325981 Q21104759 Q21484280 Q22329402 Q22326951 Q24570673 Q22328769 Q14877492 Q22328074 Q22328762 Q22327083 Q14901717 Q22330234 Q22330236 Q22330238 Q14819441 Q21108403 Q14330626 Q22328839 Q24576590 Q24576591 Q21105674 Q22327509 Q21468808 Q14863683 Q22327505 Q22327502 Q22327501 Q22327500 Q24570705 Q14864390 Q14330629 Q21971286 Q21105988 Q21095308 Q22330225 Q22326845 Q22326843 Q79927 Q14876059 Q22327647 Q22327510 Q22327511 Q21112489 Q22327517 Q22329403 Q26253890 Q22328584 Q22327343 Q22327474 Q14860540 Q1640852 Q22327421 Q21115425 Q22328601 Q22327390 Q21095620
(c(Q5058355),P361,c(Q5058355)|c(Q223557))
action approx
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q223557
action count
action filter_multi_types
action find
entity Q22327413
relation P361
type Q5058355
type Q223557
[ANSWERS] are a component of approximately the same number of cellular components and physical objects as extrahaustorial matrix
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q223557'}]]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?x ) AS ?p ) ?t WHERE { VALUES ( ?f ) { ( ontology:Q223557 ) ( ontology:Q5058355 ) } . ?x rdf:type ?f } GROUP BY ?t } . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { { { ?o rdf:type ontology:Q5058355 } UNION { ?o rdf:type ontology:Q223557 } } . resource:Q22327413 property:P361 ?o } } . FILTER ( ?p = ?r ) }
ciliary part endoplasmic reticulum membrane interleukin-35 complex viral nucleocapsid compact myelin organelle membrane PTEX complex plasma membrane part rhoptry rhoptry membrane lumenal side of membrane leaflet of membrane bilayer complement component C1 complex nuclear outer membrane prospore membrane leading edge prospore membrane spindle pole body attachment site intrinsic component of organelle membrane lateral shield interleukin-27 complex extrinsic component of postsynaptic endosome membrane extracellular matrix of synaptic cleft perisynaptic extracellular matrix ventral disc supernumerary microtubule array larval serum protein complex DAPK1-calmodulin complex synaptic vesicle cell division site part dolichyl-phosphate-mannose-protein mannosyltransferase complex HU-DNA complex presynaptic endosome membrane postsynaptic specialization extracellular matrix component interleukin-12 complex intracellular apical complex interleukin-23 complex external encapsulating structure cell septum part viral capsid, decoration virus tail, major subunit virus tail, minor subunit capsomere spitzenkorper endoplasmic reticulum palmitoyltransferase complex ventral disc lateral crest ventral disc overlap zone cell projection part longitudinal side of cell surface extracellular space of host extrahaustorial matrix extra-invasive hyphal space inhibin complex ventral disc dorsal microribbon nuclear outer membrane-endoplasmic reticulum membrane network presynaptic active zone ventral disc crossbridge virus tail, fiber virus tail, baseplate virus tail, tube virus tail, sheath virus tail, shaft extrinsic component of spine apparatus membrane fatty acid elongase complex immunoglobulin complex, circulating virus tail, tip CRLF-CLCF1 complex postsynaptic endosome presynaptic grid activin complex annulate lamellae membrane region presynaptic active zone dense projection icosahedral viral capsid, collar fiber icosahedral viral capsid, neck fiber plasma lipoprotein particle blood microparticle postsynaptic endocytic zone dinoflagellate antapex cell surface furrow extrinsic component of synaptic vesicle membrane IHF-DNA complex intrinsic component of postsynaptic endosome membrane CNTFR-CLCF1 complex classical-complement-pathway C3/C5 convertase complex perinuclear endoplasmic reticulum membrane retromer, cargo-selective complex inner membrane complex oxidoreductase complex postsynaptic endosome membrane viral portal complex lateral loop rhoptry lumen Dxr protein complex PTEN phosphatase complex intracellular part basal ring of apical complex dinoflagellate apex polar ring of apical complex fibrinogen complex synaptic vesicle lumen myelin sheath abaxonal region viral scaffold intrinsic component of presynaptic endosome membrane intrinsic component of spine apparatus membrane Nem1-Spo7 phosphatase complex postsynaptic cytosol retromer, tubulation complex insulin-like growth factor binding protein complex presynaptic endosome presynaptic active zone cytoplasmic component presynaptic endocytic zone cytoplasmic component presynaptic endocytic zone postsynaptic endocytic zone cytoplasmic component synaptic vesicle membrane myelin sheath adaxonal region oligosaccharyltransferase complex stereocilium membrane retromer complex rhoptry neck intracellular organelle part Dsc E3 ubiquitin ligase complex endoplasmic reticulum phosphatidylinositol 3-kinase complex external encapsulating structure part presynaptic cytosol postsynaptic cytoskeleton stereocilium tip presynaptic cytoskeleton basal labyrinth extrinsic component of presynaptic endosome membrane Kibra-Ex-Mer complex plasma membrane-derived photosystem I intrinsic component of synaptic vesicle membrane clathrin-coated pit Schmidt-Lanterman incisure bursicon neuropeptide hormone complex Ire1 complex H-NS complex symbiont-containing vacuolar membrane network Flemming body
H-NS complex, extracellular matrix of synaptic cleft and perisynaptic extracellular matrix are a component of approximately the same number of cellular components and physical objects as extrahaustorial matrix
H-NS complex extracellular matrix of synaptic cleft perisynaptic extracellular matrix
action approx
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type physical object
action count
action filter_multi_types
action find
entity extrahaustorial matrix
relation part of
type cellular component
type physical object
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'physical object'}]]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?x ) AS ?p ) ?t WHERE { VALUES ( ?f ) { ( ontology:physical_object ) ( ontology:cellular_component ) } . ?x rdf:type ?f } GROUP BY ?t } . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { { { ?o rdf:type ontology:cellular_component } UNION { ?o rdf:type ontology:physical_object } } . resource:extrahaustorial_matrix property:part_of ?o } } . FILTER ( ?p = ?r ) }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Logical operators
Q27549499
P681
Q15989253 Q5058355
USER
How many parts and cellular components are the components of phosphatidate cytidylyltransferase YBR029C ?
(Q27549499,P681,c(Q15989253)) (Q27549499,P681,c(Q5058355))
action count
action union
action filter_type
action find
entity Q27549499
relation P681
type Q15989253
action filter_type
action find
entity Q27549499
relation P681
type Q5058355
['Q27549499', 'P681', {'concept': 'Q15989253'}] ['Q27549499', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?p ) AS ?x ) WHERE { { resource:Q27549499 property:P681 ?p . ?p rdf:type ontology:Q5058355 } UNION { ?p rdf:type ontology:Q15989253 . resource:Q27549499 property:P681 ?p } }
phosphatidate cytidylyltransferase YBR029C
action count
action union
action filter_type
action find
entity phosphatidate cytidylyltransferase YBR029C
relation cell component
type part
action filter_type
action find
entity phosphatidate cytidylyltransferase YBR029C
relation cell component
type cellular component
['phosphatidate cytidylyltransferase YBR029C', 'cell component', {'concept': 'part'}] ['phosphatidate cytidylyltransferase YBR029C', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?p ) AS ?x ) WHERE { { resource:phosphatidate_cytidylyltransferase_YBR029C property:cell_component ?p . ?p rdf:type ontology:cellular_component } UNION { ?p rdf:type ontology:part . resource:phosphatidate_cytidylyltransferase_YBR029C property:cell_component ?p } }
[]
part cellular component
SYSTEM
1 parts and 2 cellular components
Q79927 Q14329032 Q14349455
(Q27549499,P681,c(Q15989253)) (Q27549499,P681,c(Q5058355))
action count
action union
action filter_type
action find
entity Q27549499
relation P681
type Q15989253
action filter_type
action find
entity Q27549499
relation P681
type Q5058355
[ANSWER]
['Q27549499', 'P681', {'concept': 'Q15989253'}] ['Q27549499', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?p ) AS ?x ) WHERE { { resource:Q27549499 property:P681 ?p . ?p rdf:type ontology:Q5058355 } UNION { ?p rdf:type ontology:Q15989253 . resource:Q27549499 property:P681 ?p } }
endoplasmic reticulum endoplasmic reticulum membrane membrane
1 parts and 2 cellular components
action count
action union
action filter_type
action find
entity phosphatidate cytidylyltransferase YBR029C
relation cell component
type part
action filter_type
action find
entity phosphatidate cytidylyltransferase YBR029C
relation cell component
type cellular component
['phosphatidate cytidylyltransferase YBR029C', 'cell component', {'concept': 'part'}] ['phosphatidate cytidylyltransferase YBR029C', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?p ) AS ?x ) WHERE { { resource:phosphatidate_cytidylyltransferase_YBR029C property:cell_component ?p . ?p rdf:type ontology:cellular_component } UNION { ?p rdf:type ontology:part . resource:phosphatidate_cytidylyltransferase_YBR029C property:cell_component ?p } }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P361
Q5058355 Q5058355
USER
Which cellular components are atleast 2 cellular components a portion of ?
(c(Q5058355),P361,c(Q5058355))
action atleast
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
value 2
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?l ) AS ?a ) WHERE { ?l property:P361 ?o . ?o rdf:type ontology:Q5058355 . ?l rdf:type ontology:Q5058355 } GROUP BY ?o } . FILTER ( ?a >= 2 ) }
action atleast
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
value 2
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?l ) AS ?a ) WHERE { ?l property:part_of ?o . ?o rdf:type ontology:cellular_component . ?l rdf:type ontology:cellular_component } GROUP BY ?o } . FILTER ( ?a >= 2 ) }
[]
cellular component cellular component
Q29548 Q15320191 Q14878067
SYSTEM
plasma membrane, synaptic cleft, organelle membrane
Q21106124 Q15320191 Q14864171 Q14878067 Q22327994 Q22327479 Q22327686 Q671136 Q22330431 Q189094 Q24576572 Q22329021 Q14864390 Q14329032 Q14905221 Q21199358 Q22327411 Q21109092 Q14864382 Q14353100 Q22329851 Q14863372 Q22329162 Q24570682 Q14911512 Q24570673 Q14349538 Q2914458 Q21095308 Q22327475 Q29548 Q14860546 Q899827
(c(Q5058355),P361,c(Q5058355))
action atleast
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
value 2
The [ANSWERS] are atleast 2 cellular components a portion of
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?l ) AS ?a ) WHERE { ?l property:P361 ?o . ?o rdf:type ontology:Q5058355 . ?l rdf:type ontology:Q5058355 } GROUP BY ?o } . FILTER ( ?a >= 2 ) }
viral capsid synaptic cleft cell periphery organelle membrane rhoptry presynapse prospore membrane synaptic vesicle unencapsulated part of cell cell surface presynaptic endosome membrane apical complex synaptic vesicle membrane endoplasmic reticulum membrane symbiont-containing vacuole membrane bacterial nucleoid extracellular space of host nuclear outer membrane-endoplasmic reticulum membrane network presynaptic active zone cell projection virus tail myelin sheath ventral disc spine apparatus membrane stereocilium postsynaptic endosome membrane apical part of cell extracellular space retromer complex postsynapse plasma membrane basal part of cell endomembrane system
The plasma membrane, synaptic cleft and organelle membrane are atleast 2 cellular components a portion of
plasma membrane synaptic cleft organelle membrane
action atleast
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
value 2
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?l ) AS ?a ) WHERE { ?l property:part_of ?o . ?o rdf:type ontology:cellular_component . ?l rdf:type ontology:cellular_component } GROUP BY ?o } . FILTER ( ?a >= 2 ) }
[]