Simple Question (Direct)
Simple Question
Q23425797
P682
Q1057
USER
Which metabolic process is leucyl aminopeptidase    YE0500 involved in ?
(Q23425797,P682,c(Q1057))
action filter_type
action find
entity Q23425797
relation P682
type Q1057
['Q23425797', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q1057 . resource:Q23425797 property:P682 ?a }
leucyl aminopeptidase    YE0500
action filter_type
action find
entity leucyl aminopeptidase    YE0500
relation biological process
type metabolic process
['leucyl aminopeptidase    YE0500', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:metabolic_process . resource:leucyl_aminopeptidase____YE0500 property:biological_process ?a }
[]
metabolic process
Q14864262
SYSTEM
protein metabolic process
Q14864262
(Q23425797,P682,c(Q1057))
action filter_type
action find
entity Q23425797
relation P682
type Q1057
Which metabolic process is leucyl aminopeptidase YE0500 involved in
['Q23425797', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q1057 . resource:Q23425797 property:P682 ?a }
protein metabolic process
Which metabolic process is leucyl aminopeptidase YE0500 involved in
protein metabolic process
action filter_type
action find
entity leucyl aminopeptidase    YE0500
relation biological process
type metabolic process
['leucyl aminopeptidase    YE0500', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:metabolic_process . resource:leucyl_aminopeptidase____YE0500 property:biological_process ?a }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q14864262 Q24095288
P682
Q181394
USER
Is asparagine synthase    Psyr_3747 involved in that metabolic process ?
(Q24095288,P682,Q14864262)
action is_in
entity Q24095288
action find
entity Q14864262
relation P682
['Q24095288', 'P682', 'Q14864262']
ASK WHERE { resource:Q14864262 property:P682 resource:Q24095288 }
protein metabolic process asparagine synthase    Psyr_3747
action is_in
entity asparagine synthase    Psyr_3747
action find
entity protein metabolic process
relation biological process
['asparagine synthase    Psyr_3747', 'biological process', 'protein metabolic process']
ASK WHERE { resource:protein_metabolic_process property:biological_process resource:asparagine_synthase____Psyr_3747 }
[]
nutrient
SYSTEM
NO
(Q24095288,P682,Q14864262)
action is_in
entity Q24095288
action find
entity Q14864262
relation P682
[ANSWER]
['Q24095288', 'P682', 'Q14864262']
ASK WHERE { resource:Q14864262 property:P682 resource:Q24095288 }
No
action is_in
entity asparagine synthase    Psyr_3747
action find
entity protein metabolic process
relation biological process
['asparagine synthase    Psyr_3747', 'biological process', 'protein metabolic process']
ASK WHERE { resource:protein_metabolic_process property:biological_process resource:asparagine_synthase____Psyr_3747 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q23425797
P688
Q863908
USER
How many nucleic acid sequences encodes leucyl aminopeptidase    YE0500 ?
(c(Q863908),P688,Q23425797)
action count
action filter_type
action find_reverse
entity Q23425797
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23425797']
SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) WHERE { ?q property:P688 resource:Q23425797 . ?q rdf:type ontology:Q863908 }
leucyl aminopeptidase    YE0500
action count
action filter_type
action find_reverse
entity leucyl aminopeptidase    YE0500
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'leucyl aminopeptidase    YE0500']
SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) WHERE { ?q property:encodes resource:leucyl_aminopeptidase____YE0500 . ?q rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q23100166
(c(Q863908),P688,Q23425797)
action count
action filter_type
action find_reverse
entity Q23425797
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q23425797']
SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) WHERE { ?q property:P688 resource:Q23425797 . ?q rdf:type ontology:Q863908 }
leucyl aminopeptidase    YE0500
1
action count
action filter_type
action find_reverse
entity leucyl aminopeptidase    YE0500
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'leucyl aminopeptidase    YE0500']
SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) WHERE { ?q property:encodes resource:leucyl_aminopeptidase____YE0500 . ?q rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23425797
P680
Q44424
USER
Which the chemical bonds that represents the molecular function of leucyl aminopeptidase    YE0500 ?
(Q23425797,P680,c(Q44424))
action filter_type
action find
entity Q23425797
relation P680
type Q44424
['Q23425797', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?s WHERE { resource:Q23425797 property:P680 ?s . ?s rdf:type ontology:Q44424 }
leucyl aminopeptidase    YE0500
action filter_type
action find
entity leucyl aminopeptidase    YE0500
relation molecular function
type chemical bond
['leucyl aminopeptidase    YE0500', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?s WHERE { resource:leucyl_aminopeptidase____YE0500 property:molecular_function ?s . ?s rdf:type ontology:chemical_bond }
[]
chemical bond
Q14873986 Q13667380
SYSTEM
manganese ion binding, metal ion binding
Q14873986 Q13667380
(Q23425797,P680,c(Q44424))
action filter_type
action find
entity Q23425797
relation P680
type Q44424
Represents The [ANSWERS]
['Q23425797', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?s WHERE { resource:Q23425797 property:P680 ?s . ?s rdf:type ontology:Q44424 }
manganese ion binding metal ion binding
Represents The manganese ion binding and metal ion binding
manganese ion binding metal ion binding
action filter_type
action find
entity leucyl aminopeptidase    YE0500
relation molecular function
type chemical bond
['leucyl aminopeptidase    YE0500', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?s WHERE { resource:leucyl_aminopeptidase____YE0500 property:molecular_function ?s . ?s rdf:type ontology:chemical_bond }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21151411
Q44424
USER
And also tell me about Steroidogenic factor 1 nuclear receptor?
(Q21151411,P680,c(Q44424))
action filter_type
action find
entity Q21151411
relation P680
type Q44424
['Q21151411', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q44424 . resource:Q21151411 property:P680 ?i }
Steroidogenic factor 1 nuclear receptor
action filter_type
action find
entity Steroidogenic factor 1 nuclear receptor
relation molecular function
type chemical bond
['Steroidogenic factor 1 nuclear receptor', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:chemical_bond . resource:Steroidogenic_factor_1_nuclear_receptor property:molecular_function ?i }
[]
chemical bond
Q13667380 Q14633865
SYSTEM
metal ion binding, zinc ion binding
Q13667380 Q14633865
(Q21151411,P680,c(Q44424))
action filter_type
action find
entity Q21151411
relation P680
type Q44424
[ANSWERS]
['Q21151411', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q44424 . resource:Q21151411 property:P680 ?i }
metal ion binding zinc ion binding
metal ion binding zinc ion binding
action filter_type
action find
entity Steroidogenic factor 1 nuclear receptor
relation molecular function
type chemical bond
['Steroidogenic factor 1 nuclear receptor', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:chemical_bond . resource:Steroidogenic_factor_1_nuclear_receptor property:molecular_function ?i }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q23630351
P680
Q181394
USER
Are phytoene dehydrogenase    RB10270 the gene that have those chemical bonds as the molecular function ?
(Q23630351,P680,Q13667380) (Q23630351,P680,Q14633865)
action is_in
entity prev_answer
action find
entity Q23630351
relation P680
['Q23630351', 'P680', 'Q13667380'] ['Q23630351', 'P680', 'Q14633865']
ASK WHERE { VALUES ( ?b ) { ( resource:Q13667380 ) ( resource:Q14633865 ) } . resource:Q23630351 property:P680 ?b }
phytoene dehydrogenase    RB10270
action is_in
entity prev_answer
action find
entity phytoene dehydrogenase    RB10270
relation molecular function
['phytoene dehydrogenase    RB10270', 'molecular function', 'metal ion binding'] ['phytoene dehydrogenase    RB10270', 'molecular function', 'zinc ion binding']
ASK WHERE { VALUES ( ?b ) { ( resource:metal_ion_binding ) ( resource:zinc_ion_binding ) } . resource:phytoene_dehydrogenase____RB10270 property:molecular_function ?b }
[]
nutrient
SYSTEM
NO
(Q23630351,P680,Q13667380) (Q23630351,P680,Q14633865)
action is_in
entity prev_answer
action find
entity Q23630351
relation P680
[ANSWER]
['Q23630351', 'P680', 'Q13667380'] ['Q23630351', 'P680', 'Q14633865']
ASK WHERE { VALUES ( ?b ) { ( resource:Q13667380 ) ( resource:Q14633865 ) } . resource:Q23630351 property:P680 ?b }
No
action is_in
entity prev_answer
action find
entity phytoene dehydrogenase    RB10270
relation molecular function
['phytoene dehydrogenase    RB10270', 'molecular function', 'metal ion binding'] ['phytoene dehydrogenase    RB10270', 'molecular function', 'zinc ion binding']
ASK WHERE { VALUES ( ?b ) { ( resource:metal_ion_binding ) ( resource:zinc_ion_binding ) } . resource:phytoene_dehydrogenase____RB10270 property:molecular_function ?b }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21151411
P702
Q863908
USER
What encodes Steroidogenic factor 1 nuclear receptor ?
(Q21151411,P702,c(Q863908))
action filter_type
action find
entity Q21151411
relation P702
type Q863908
['Q21151411', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?l WHERE { resource:Q21151411 property:P702 ?l . ?l rdf:type ontology:Q863908 }
Steroidogenic factor 1 nuclear receptor
action filter_type
action find
entity Steroidogenic factor 1 nuclear receptor
relation encoded by
type nucleic acid sequence
['Steroidogenic factor 1 nuclear receptor', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?l WHERE { resource:Steroidogenic_factor_1_nuclear_receptor property:encoded_by ?l . ?l rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q15312538
SYSTEM
NR5A1
Q15312538
(Q21151411,P702,c(Q863908))
action filter_type
action find
entity Q21151411
relation P702
type Q863908
[ANSWER] encodes Steroidogenic factor 1 nuclear receptor
['Q21151411', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?l WHERE { resource:Q21151411 property:P702 ?l . ?l rdf:type ontology:Q863908 }
NR5A1
NR5A1 encodes Steroidogenic factor 1 nuclear receptor
NR5A1
action filter_type
action find
entity Steroidogenic factor 1 nuclear receptor
relation encoded by
type nucleic acid sequence
['Steroidogenic factor 1 nuclear receptor', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?l WHERE { resource:Steroidogenic_factor_1_nuclear_receptor property:encoded_by ?l . ?l rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q22293315
Q863908
USER
And how about hypothetical protein    TDE1820?
(Q22293315,P702,c(Q863908))
action filter_type
action find
entity Q22293315
relation P702
type Q863908
['Q22293315', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q863908 . resource:Q22293315 property:P702 ?b }
hypothetical protein    TDE1820
action filter_type
action find
entity hypothetical protein    TDE1820
relation encoded by
type nucleic acid sequence
['hypothetical protein    TDE1820', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:nucleic_acid_sequence . resource:hypothetical_protein____TDE1820 property:encoded_by ?b }
[]
nucleic acid sequence
Q22289282
SYSTEM
hypothetical protein    TDE1820
Q22289282
(Q22293315,P702,c(Q863908))
action filter_type
action find
entity Q22293315
relation P702
type Q863908
[ANSWER]
['Q22293315', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q863908 . resource:Q22293315 property:P702 ?b }
hypothetical protein    TDE1820
hypothetical protein    TDE1820
action filter_type
action find
entity hypothetical protein    TDE1820
relation encoded by
type nucleic acid sequence
['hypothetical protein    TDE1820', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:nucleic_acid_sequence . resource:hypothetical_protein____TDE1820 property:encoded_by ?b }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23425797
P703
Q631147
USER
Where is leucyl aminopeptidase    YE0500 found ?
(Q23425797,P703,c(Q631147))
action filter_type
action find
entity Q23425797
relation P703
type Q631147
['Q23425797', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { resource:Q23425797 property:P703 ?q . ?q rdf:type ontology:Q631147 }
leucyl aminopeptidase    YE0500
action filter_type
action find
entity leucyl aminopeptidase    YE0500
relation found in taxon
type infraspecific name
['leucyl aminopeptidase    YE0500', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { resource:leucyl_aminopeptidase____YE0500 property:found_in_taxon ?q . ?q rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102942
SYSTEM
Yersinia enterocolitica subsp. enterocolitica 8081
Q21102942
(Q23425797,P703,c(Q631147))
action filter_type
action find
entity Q23425797
relation P703
type Q631147
Leucyl aminopeptidase YE0500 is found in [ANSWER]
['Q23425797', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { resource:Q23425797 property:P703 ?q . ?q rdf:type ontology:Q631147 }
Yersinia enterocolitica subsp. enterocolitica 8081
Leucyl aminopeptidase YE0500 is found in Yersinia enterocolitica subsp. enterocolitica 8081
Yersinia enterocolitica subsp. enterocolitica 8081
action filter_type
action find
entity leucyl aminopeptidase    YE0500
relation found in taxon
type infraspecific name
['leucyl aminopeptidase    YE0500', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { resource:leucyl_aminopeptidase____YE0500 property:found_in_taxon ?q . ?q rdf:type ontology:infraspecific_name }
[]