Simple Question (Direct)
Simple Question
Q7662361
P681
Q15989253
USER
Which are the parts that are a component of Synemin ?
(Q7662361,P681,c(Q15989253))
action filter_type
action find
entity Q7662361
relation P681
type Q15989253
['Q7662361', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?v WHERE { resource:Q7662361 property:P681 ?v . ?v rdf:type ontology:Q15989253 }
Synemin
action filter_type
action find
entity Synemin
relation cell component
type part
['Synemin', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?v WHERE { resource:Synemin property:cell_component ?v . ?v rdf:type ontology:part }
[]
part
Q189073 Q79899 Q14349455
SYSTEM
cell junction, cytoplasm, membrane
Q189073 Q79899 Q14349455
(Q7662361,P681,c(Q15989253))
action filter_type
action find
entity Q7662361
relation P681
type Q15989253
The [ANSWERS] the parts that are a component of Synemin
['Q7662361', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?v WHERE { resource:Q7662361 property:P681 ?v . ?v rdf:type ontology:Q15989253 }
cell junction cytoplasm membrane
The cell junction, cytoplasm and membrane the parts that are a component of Synemin
cell junction cytoplasm membrane
action filter_type
action find
entity Synemin
relation cell component
type part
['Synemin', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?v WHERE { resource:Synemin property:cell_component ?v . ?v rdf:type ontology:part }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q7662361
P702
Q863908
USER
Which gene encodes that nutrient ?
(Q189073,P702,c(Q863908)) (Q79899,P702,c(Q863908)) (Q14349455,P702,c(Q863908))
action filter_type
action find
entity Q7662361
relation P702
type Q863908
['Q189073', 'P702', {'concept': 'Q863908'}] ['Q79899', 'P702', {'concept': 'Q863908'}] ['Q14349455', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { resource:Q7662361 property:P702 ?w . ?w rdf:type ontology:Q863908 }
Synemin
action filter_type
action find
entity Synemin
relation encoded by
type nucleic acid sequence
['cell junction', 'encoded by', {'concept': 'nucleic acid sequence'}] ['cytoplasm', 'encoded by', {'concept': 'nucleic acid sequence'}] ['membrane', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { resource:Synemin property:encoded_by ?w . ?w rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18037102
SYSTEM
SYNM
Q18037102
(Q189073,P702,c(Q863908)) (Q79899,P702,c(Q863908)) (Q14349455,P702,c(Q863908))
action filter_type
action find
entity Q7662361
relation P702
type Q863908
[ANSWER] encodes that nutrient
['Q189073', 'P702', {'concept': 'Q863908'}] ['Q79899', 'P702', {'concept': 'Q863908'}] ['Q14349455', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { resource:Q7662361 property:P702 ?w . ?w rdf:type ontology:Q863908 }
SYNM
SYNM encodes that nutrient
SYNM
action filter_type
action find
entity Synemin
relation encoded by
type nucleic acid sequence
['cell junction', 'encoded by', {'concept': 'nucleic acid sequence'}] ['cytoplasm', 'encoded by', {'concept': 'nucleic acid sequence'}] ['membrane', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { resource:Synemin property:encoded_by ?w . ?w rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q18037102 Q7662361
P688
Q181394
USER
Is Synemin encoded by that nucleic acid sequence ?
(Q18037102,P688,Q7662361)
action is_in
entity Q7662361
action find
entity Q18037102
relation P688
['Q18037102', 'P688', 'Q7662361']
ASK WHERE { resource:Q18037102 property:P688 resource:Q7662361 }
SYNM Synemin
action is_in
entity Synemin
action find
entity SYNM
relation encodes
['SYNM', 'encodes', 'Synemin']
ASK WHERE { resource:SYNM property:encodes resource:Synemin }
[]
nutrient
SYSTEM
YES
(Q18037102,P688,Q7662361)
action is_in
entity Q7662361
action find
entity Q18037102
relation P688
[ANSWER]
['Q18037102', 'P688', 'Q7662361']
ASK WHERE { resource:Q18037102 property:P688 resource:Q7662361 }
Yes
action is_in
entity Synemin
action find
entity SYNM
relation encodes
['SYNM', 'encodes', 'Synemin']
ASK WHERE { resource:SYNM property:encodes resource:Synemin }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18037102
P684
Q863908
USER
Which is the species that has SYNM as its orthologous gene ?
(c(Q863908),P684,Q18037102)
action filter_type
action find
entity Q18037102
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18037102']
SELECT DISTINCT ?r WHERE { resource:Q18037102 property:P684 ?r . ?r rdf:type ontology:Q863908 }
SYNM
action filter_type
action find
entity SYNM
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'SYNM']
SELECT DISTINCT ?r WHERE { resource:SYNM property:ortholog ?r . ?r rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18298216
SYSTEM
Synm
Q18298216
(c(Q863908),P684,Q18037102)
action filter_type
action find
entity Q18037102
relation P684
type Q863908
[ANSWER] is the species that has SYNM as its orthologous gene
[{'concept': 'Q863908'}, 'P684', 'Q18037102']
SELECT DISTINCT ?r WHERE { resource:Q18037102 property:P684 ?r . ?r rdf:type ontology:Q863908 }
Synm
Synm is the species that has SYNM as its orthologous gene
Synm
action filter_type
action find
entity SYNM
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'SYNM']
SELECT DISTINCT ?r WHERE { resource:SYNM property:ortholog ?r . ?r rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18298216
P703
Q16521
USER
Where is that nucleic acid sequence found ?
(Q18298216,P703,c(Q16521))
action filter_type
action find
entity Q18298216
relation P703
type Q16521
['Q18298216', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?m WHERE { resource:Q18298216 property:P703 ?m . ?m rdf:type ontology:Q16521 }
Synm
action filter_type
action find
entity Synm
relation found in taxon
type taxon
['Synm', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?m WHERE { resource:Synm property:found_in_taxon ?m . ?m rdf:type ontology:taxon }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
(Q18298216,P703,c(Q16521))
action filter_type
action find
entity Q18298216
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
['Q18298216', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?m WHERE { resource:Q18298216 property:P703 ?m . ?m rdf:type ontology:Q16521 }
Mus musculus
That nucleic acid sequence is found in Mus musculus
Mus musculus
action filter_type
action find
entity Synm
relation found in taxon
type taxon
['Synm', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?m WHERE { resource:Synm property:found_in_taxon ?m . ?m rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q83310 Q14914533
P703
Q181394
USER
Is Major centromere autoantigen B found in the taxon that one ?
(Q14914533,P703,Q83310)
action is_in
entity Q83310
action find
entity Q14914533
relation P703
['Q14914533', 'P703', 'Q83310']
ASK WHERE { resource:Q14914533 property:P703 resource:Q83310 }
Mus musculus Major centromere autoantigen B
action is_in
entity Mus musculus
action find
entity Major centromere autoantigen B
relation found in taxon
['Major centromere autoantigen B', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Major_centromere_autoantigen_B property:found_in_taxon resource:Mus_musculus }
[]
nutrient
SYSTEM
YES
(Q14914533,P703,Q83310)
action is_in
entity Q83310
action find
entity Q14914533
relation P703
[ANSWER]
['Q14914533', 'P703', 'Q83310']
ASK WHERE { resource:Q14914533 property:P703 resource:Q83310 }
Yes
action is_in
entity Mus musculus
action find
entity Major centromere autoantigen B
relation found in taxon
['Major centromere autoantigen B', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Major_centromere_autoantigen_B property:found_in_taxon resource:Mus_musculus }
[]