Simple Question (Direct)
Simple Question
Q24270554
P680
Q44424
USER
Which the chemical bonds that represents the molecular function of phosphoribosylamine--glycine ligase    KPHS_02250 ?
(Q24270554,P680,c(Q44424))
action filter_type
action find
entity Q24270554
relation P680
type Q44424
['Q24270554', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?g WHERE { resource:Q24270554 property:P680 ?g . ?g rdf:type ontology:Q44424 }
phosphoribosylamine--glycine ligase    KPHS_02250
action filter_type
action find
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation molecular function
type chemical bond
['phosphoribosylamine--glycine ligase    KPHS_02250', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?g WHERE { resource:phosphoribosylamine--glycine_ligase____KPHS_02250 property:molecular_function ?g . ?g rdf:type ontology:chemical_bond }
[]
chemical bond
Q14860850 Q13667380 Q14873986
SYSTEM
magnesium ion binding, metal ion binding, manganese ion binding
Q14860850 Q13667380 Q14873986
(Q24270554,P680,c(Q44424))
action filter_type
action find
entity Q24270554
relation P680
type Q44424
Represents and [ANSWERS]
['Q24270554', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?g WHERE { resource:Q24270554 property:P680 ?g . ?g rdf:type ontology:Q44424 }
magnesium ion binding metal ion binding manganese ion binding
Represents and magnesium ion binding, metal ion binding and manganese ion binding
magnesium ion binding metal ion binding manganese ion binding
action filter_type
action find
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation molecular function
type chemical bond
['phosphoribosylamine--glycine ligase    KPHS_02250', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?g WHERE { resource:phosphoribosylamine--glycine_ligase____KPHS_02250 property:molecular_function ?g . ?g rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24270554
P688
Q863908
USER
Which nucleic acid sequence encodes phosphoribosylamine--glycine ligase    KPHS_02250 ?
(c(Q863908),P688,Q24270554)
action filter_type
action find_reverse
entity Q24270554
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24270554']
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q863908 . ?g property:P688 resource:Q24270554 }
phosphoribosylamine--glycine ligase    KPHS_02250
action filter_type
action find_reverse
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'phosphoribosylamine--glycine ligase    KPHS_02250']
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:nucleic_acid_sequence . ?g property:encodes resource:phosphoribosylamine--glycine_ligase____KPHS_02250 }
[]
nucleic acid sequence
Q23128857
SYSTEM
phosphoribosylamine--glycine ligase    KPHS_02250
Q23128857
(c(Q863908),P688,Q24270554)
action filter_type
action find_reverse
entity Q24270554
relation P688
type Q863908
Phosphoribosylamine--glycine ligase KPHS 02250 encodes phosphoribosylamine--glycine ligase KPHS_02250
[{'concept': 'Q863908'}, 'P688', 'Q24270554']
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q863908 . ?g property:P688 resource:Q24270554 }
phosphoribosylamine--glycine ligase    KPHS_02250
Phosphoribosylamine--glycine ligase KPHS 02250 encodes phosphoribosylamine--glycine ligase KPHS_02250
phosphoribosylamine--glycine ligase    KPHS_02250
action filter_type
action find_reverse
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'phosphoribosylamine--glycine ligase    KPHS_02250']
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:nucleic_acid_sequence . ?g property:encodes resource:phosphoribosylamine--glycine_ligase____KPHS_02250 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24270554
P702
Q863908
USER
Which gene encodes phosphoribosylamine--glycine ligase    KPHS_02250 ?
(Q24270554,P702,c(Q863908))
action filter_type
action find
entity Q24270554
relation P702
type Q863908
['Q24270554', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?h WHERE { resource:Q24270554 property:P702 ?h . ?h rdf:type ontology:Q863908 }
phosphoribosylamine--glycine ligase    KPHS_02250
action filter_type
action find
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation encoded by
type nucleic acid sequence
['phosphoribosylamine--glycine ligase    KPHS_02250', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?h WHERE { resource:phosphoribosylamine--glycine_ligase____KPHS_02250 property:encoded_by ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23128857
SYSTEM
phosphoribosylamine--glycine ligase    KPHS_02250
Q23128857
(Q24270554,P702,c(Q863908))
action filter_type
action find
entity Q24270554
relation P702
type Q863908
Phosphoribosylamine--glycine ligase KPHS 02250 encodes phosphoribosylamine--glycine ligase KPHS_02250
['Q24270554', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?h WHERE { resource:Q24270554 property:P702 ?h . ?h rdf:type ontology:Q863908 }
phosphoribosylamine--glycine ligase    KPHS_02250
Phosphoribosylamine--glycine ligase KPHS 02250 encodes phosphoribosylamine--glycine ligase KPHS_02250
phosphoribosylamine--glycine ligase    KPHS_02250
action filter_type
action find
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation encoded by
type nucleic acid sequence
['phosphoribosylamine--glycine ligase    KPHS_02250', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?h WHERE { resource:phosphoribosylamine--glycine_ligase____KPHS_02250 property:encoded_by ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23128857 Q4654670
P688
Q181394
USER
How many nutrients are phosphoribosylamine--glycine ligase    KPHS_02250 or ubiquitin-like protein ATG8 YBL078C an encoding of ?
(Q23128857,P688,c(Q181394)) (Q4654670,P688,c(Q181394))
action count
action union
action filter_type
action find
entity Q23128857
relation P688
type Q181394
action filter_type
action find
entity Q4654670
relation P688
type Q181394
['Q23128857', 'P688', {'concept': 'Q181394'}] ['Q4654670', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?a ) WHERE { { resource:Q23128857 property:P688 ?x . ?x rdf:type ontology:Q181394 } UNION { resource:Q4654670 property:P688 ?x . ?x rdf:type ontology:Q181394 } }
phosphoribosylamine--glycine ligase    KPHS_02250 ubiquitin-like protein ATG8 YBL078C
action count
action union
action filter_type
action find
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation encodes
type nutrient
action filter_type
action find
entity ubiquitin-like protein ATG8 YBL078C
relation encodes
type nutrient
['phosphoribosylamine--glycine ligase    KPHS_02250', 'encodes', {'concept': 'nutrient'}] ['ubiquitin-like protein ATG8 YBL078C', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?a ) WHERE { { resource:phosphoribosylamine--glycine_ligase____KPHS_02250 property:encodes ?x . ?x rdf:type ontology:nutrient } UNION { resource:ubiquitin-like_protein_ATG8_YBL078C property:encodes ?x . ?x rdf:type ontology:nutrient } }
[]
nutrient
SYSTEM
2
Q27548992 Q24270554
(Q23128857,P688,c(Q181394)) (Q4654670,P688,c(Q181394))
action count
action union
action filter_type
action find
entity Q23128857
relation P688
type Q181394
action filter_type
action find
entity Q4654670
relation P688
type Q181394
[ANSWER]
['Q23128857', 'P688', {'concept': 'Q181394'}] ['Q4654670', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?a ) WHERE { { resource:Q23128857 property:P688 ?x . ?x rdf:type ontology:Q181394 } UNION { resource:Q4654670 property:P688 ?x . ?x rdf:type ontology:Q181394 } }
ubiquitin-like protein ATG8 YBL078C phosphoribosylamine--glycine ligase    KPHS_02250
2
action count
action union
action filter_type
action find
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation encodes
type nutrient
action filter_type
action find
entity ubiquitin-like protein ATG8 YBL078C
relation encodes
type nutrient
['phosphoribosylamine--glycine ligase    KPHS_02250', 'encodes', {'concept': 'nutrient'}] ['ubiquitin-like protein ATG8 YBL078C', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?a ) WHERE { { resource:phosphoribosylamine--glycine_ligase____KPHS_02250 property:encodes ?x . ?x rdf:type ontology:nutrient } UNION { resource:ubiquitin-like_protein_ATG8_YBL078C property:encodes ?x . ?x rdf:type ontology:nutrient } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23128857
P703
Q631147
USER
Which taxon is phosphoribosylamine--glycine ligase    KPHS_02250 a part of ?
(Q23128857,P703,c(Q631147))
action filter_type
action find
entity Q23128857
relation P703
type Q631147
['Q23128857', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?s WHERE { resource:Q23128857 property:P703 ?s . ?s rdf:type ontology:Q631147 }
phosphoribosylamine--glycine ligase    KPHS_02250
action filter_type
action find
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation found in taxon
type infraspecific name
['phosphoribosylamine--glycine ligase    KPHS_02250', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?s WHERE { resource:phosphoribosylamine--glycine_ligase____KPHS_02250 property:found_in_taxon ?s . ?s rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102939
SYSTEM
Klebsiella pneumoniae subsp. pneumoniae HS11286
Q21102939
(Q23128857,P703,c(Q631147))
action filter_type
action find
entity Q23128857
relation P703
type Q631147
[ANSWER] is phosphoribosylamine--glycine ligase KPHS_02250 a part of
['Q23128857', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?s WHERE { resource:Q23128857 property:P703 ?s . ?s rdf:type ontology:Q631147 }
Klebsiella pneumoniae subsp. pneumoniae HS11286
Klebsiella pneumoniae subsp. pneumoniae HS11286 is phosphoribosylamine--glycine ligase KPHS_02250 a part of
Klebsiella pneumoniae subsp. pneumoniae HS11286
action filter_type
action find
entity phosphoribosylamine--glycine ligase    KPHS_02250
relation found in taxon
type infraspecific name
['phosphoribosylamine--glycine ligase    KPHS_02250', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?s WHERE { resource:phosphoribosylamine--glycine_ligase____KPHS_02250 property:found_in_taxon ?s . ?s rdf:type ontology:infraspecific_name }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q24138765
Q631147
USER
And what about DUF2138 family protein, putative host defense protein    b2230?
(Q24138765,P703,c(Q631147))
action filter_type
action find
entity Q24138765
relation P703
type Q631147
['Q24138765', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?z WHERE { resource:Q24138765 property:P703 ?z . ?z rdf:type ontology:Q631147 }
DUF2138 family protein, putative host defense protein    b2230
action filter_type
action find
entity DUF2138 family protein, putative host defense protein    b2230
relation found in taxon
type infraspecific name
['DUF2138 family protein, putative host defense protein    b2230', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?z WHERE { resource:DUF2138_family_protein,_putative_host_defense_protein____b2230 property:found_in_taxon ?z . ?z rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102938
SYSTEM
Escherichia coli str. K-12 substr. MG1655
Q21102938
(Q24138765,P703,c(Q631147))
action filter_type
action find
entity Q24138765
relation P703
type Q631147
[ANSWER]
['Q24138765', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?z WHERE { resource:Q24138765 property:P703 ?z . ?z rdf:type ontology:Q631147 }
Escherichia coli str. K-12 substr. MG1655
Escherichia coli str. K-12 substr. MG1655
action filter_type
action find
entity DUF2138 family protein, putative host defense protein    b2230
relation found in taxon
type infraspecific name
['DUF2138 family protein, putative host defense protein    b2230', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?z WHERE { resource:DUF2138_family_protein,_putative_host_defense_protein____b2230 property:found_in_taxon ?z . ?z rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q24138765
P688
Q863908
USER
How many nucleic acid sequences encode DUF2138 family protein, putative host defense protein    b2230 ?
(c(Q863908),P688,Q24138765)
action count
action filter_type
action find_reverse
entity Q24138765
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24138765']
SELECT DISTINCT ( COUNT ( ?m ) AS ?a ) WHERE { ?m rdf:type ontology:Q863908 . ?m property:P688 resource:Q24138765 }
DUF2138 family protein, putative host defense protein    b2230
action count
action filter_type
action find_reverse
entity DUF2138 family protein, putative host defense protein    b2230
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'DUF2138 family protein, putative host defense protein    b2230']
SELECT DISTINCT ( COUNT ( ?m ) AS ?a ) WHERE { ?m rdf:type ontology:nucleic_acid_sequence . ?m property:encodes resource:DUF2138_family_protein,_putative_host_defense_protein____b2230 }
[]
nucleic acid sequence
SYSTEM
1
Q23087344
(c(Q863908),P688,Q24138765)
action count
action filter_type
action find_reverse
entity Q24138765
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q24138765']
SELECT DISTINCT ( COUNT ( ?m ) AS ?a ) WHERE { ?m rdf:type ontology:Q863908 . ?m property:P688 resource:Q24138765 }
DUF2138 family protein, putative host defense protein    b2230
1
action count
action filter_type
action find_reverse
entity DUF2138 family protein, putative host defense protein    b2230
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'DUF2138 family protein, putative host defense protein    b2230']
SELECT DISTINCT ( COUNT ( ?m ) AS ?a ) WHERE { ?m rdf:type ontology:nucleic_acid_sequence . ?m property:encodes resource:DUF2138_family_protein,_putative_host_defense_protein____b2230 }
[]