Simple Question (Direct)
Simple Question
Q21132932
P703
Q16521
USER
Which taxon is Histone-lysine N-methyltransferase SUV39H2 found in ?
(Q21132932,P703,c(Q16521))
action filter_type
action find
entity Q21132932
relation P703
type Q16521
['Q21132932', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?t WHERE { resource:Q21132932 property:P703 ?t . ?t rdf:type ontology:Q16521 }
Histone-lysine N-methyltransferase SUV39H2
action filter_type
action find
entity Histone-lysine N-methyltransferase SUV39H2
relation found in taxon
type taxon
['Histone-lysine N-methyltransferase SUV39H2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?t WHERE { resource:Histone-lysine_N-methyltransferase_SUV39H2 property:found_in_taxon ?t . ?t rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21132932,P703,c(Q16521))
action filter_type
action find
entity Q21132932
relation P703
type Q16521
[ANSWER] is Histone-lysine N-methyltransferase SUV39H2 found in
['Q21132932', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?t WHERE { resource:Q21132932 property:P703 ?t . ?t rdf:type ontology:Q16521 }
Homo sapiens
Homo sapiens is Histone-lysine N-methyltransferase SUV39H2 found in
Homo sapiens
action filter_type
action find
entity Histone-lysine N-methyltransferase SUV39H2
relation found in taxon
type taxon
['Histone-lysine N-methyltransferase SUV39H2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?t WHERE { resource:Histone-lysine_N-methyltransferase_SUV39H2 property:found_in_taxon ?t . ?t rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21132932
P702
Q863908
USER
What is the gene that encodes that nutrient ?
(Q15978631,P702,c(Q863908))
action filter_type
action find
entity Q21132932
relation P702
type Q863908
['Q15978631', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?o WHERE { resource:Q21132932 property:P702 ?o . ?o rdf:type ontology:Q863908 }
Histone-lysine N-methyltransferase SUV39H2
action filter_type
action find
entity Histone-lysine N-methyltransferase SUV39H2
relation encoded by
type nucleic acid sequence
['Homo sapiens', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?o WHERE { resource:Histone-lysine_N-methyltransferase_SUV39H2 property:encoded_by ?o . ?o rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18046297
SYSTEM
SUV39H2
Q18046297
(Q15978631,P702,c(Q863908))
action filter_type
action find
entity Q21132932
relation P702
type Q863908
The gene that encodes that nutrient is a [ANSWER]
['Q15978631', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?o WHERE { resource:Q21132932 property:P702 ?o . ?o rdf:type ontology:Q863908 }
SUV39H2
The gene that encodes that nutrient is a SUV39H2
SUV39H2
action filter_type
action find
entity Histone-lysine N-methyltransferase SUV39H2
relation encoded by
type nucleic acid sequence
['Homo sapiens', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?o WHERE { resource:Histone-lysine_N-methyltransferase_SUV39H2 property:encoded_by ?o . ?o rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Indirect
P702
Q181394
USER
How many nutrients are encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q18046297)
action count
action filter_type
action find_reverse
entity Q18046297
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q18046297']
SELECT DISTINCT ( COUNT ( ?p ) AS ?b ) WHERE { ?p property:P702 resource:Q18046297 . ?p rdf:type ontology:Q181394 }
action count
action filter_type
action find_reverse
entity SUV39H2
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'SUV39H2']
SELECT DISTINCT ( COUNT ( ?p ) AS ?b ) WHERE { ?p property:encoded_by resource:SUV39H2 . ?p rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
2
Q21132932 Q21137394
(c(Q181394),P702,Q18046297)
action count
action filter_type
action find_reverse
entity Q18046297
relation P702
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q18046297']
SELECT DISTINCT ( COUNT ( ?p ) AS ?b ) WHERE { ?p property:P702 resource:Q18046297 . ?p rdf:type ontology:Q181394 }
Histone-lysine N-methyltransferase SUV39H2 Histone-lysine N-methyltransferase SUV39H2
2
action count
action filter_type
action find_reverse
entity SUV39H2
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'SUV39H2']
SELECT DISTINCT ( COUNT ( ?p ) AS ?b ) WHERE { ?p property:encoded_by resource:SUV39H2 . ?p rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18046297
P684
Q863908
USER
Which nucleic acid sequence is an orthologous gene for SUV39H2 ?
(Q18046297,P684,c(Q863908))
action filter_type
action find
entity Q18046297
relation P684
type Q863908
['Q18046297', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?f WHERE { resource:Q18046297 property:P684 ?f . ?f rdf:type ontology:Q863908 }
SUV39H2
action filter_type
action find
entity SUV39H2
relation ortholog
type nucleic acid sequence
['SUV39H2', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?f WHERE { resource:SUV39H2 property:ortholog ?f . ?f rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18261470
SYSTEM
Suv39h2
Q18261470
(Q18046297,P684,c(Q863908))
action filter_type
action find
entity Q18046297
relation P684
type Q863908
[ANSWER] is an orthologous gene for SUV39H2
['Q18046297', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?f WHERE { resource:Q18046297 property:P684 ?f . ?f rdf:type ontology:Q863908 }
Suv39h2
Suv39h2 is an orthologous gene for SUV39H2
Suv39h2
action filter_type
action find
entity SUV39H2
relation ortholog
type nucleic acid sequence
['SUV39H2', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?f WHERE { resource:SUV39H2 property:ortholog ?f . ?f rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q21132932
P688
Q863908
USER
How many nucleic acid sequences encodes Histone-lysine N-methyltransferase SUV39H2 ?
(c(Q863908),P688,Q21132932)
action count
action filter_type
action find_reverse
entity Q21132932
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21132932']
SELECT DISTINCT ( COUNT ( ?e ) AS ?v ) WHERE { ?e property:P688 resource:Q21132932 . ?e rdf:type ontology:Q863908 }
Histone-lysine N-methyltransferase SUV39H2
action count
action filter_type
action find_reverse
entity Histone-lysine N-methyltransferase SUV39H2
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Histone-lysine N-methyltransferase SUV39H2']
SELECT DISTINCT ( COUNT ( ?e ) AS ?v ) WHERE { ?e property:encodes resource:Histone-lysine_N-methyltransferase_SUV39H2 . ?e rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q18046297
(c(Q863908),P688,Q21132932)
action count
action filter_type
action find_reverse
entity Q21132932
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q21132932']
SELECT DISTINCT ( COUNT ( ?e ) AS ?v ) WHERE { ?e property:P688 resource:Q21132932 . ?e rdf:type ontology:Q863908 }
SUV39H2
1
action count
action filter_type
action find_reverse
entity Histone-lysine N-methyltransferase SUV39H2
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Histone-lysine N-methyltransferase SUV39H2']
SELECT DISTINCT ( COUNT ( ?e ) AS ?v ) WHERE { ?e property:encodes resource:Histone-lysine_N-methyltransferase_SUV39H2 . ?e rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q22231685 Q21132932
P680
Q44424
USER
Which chemical bonds represent molecular function of Histone-lysine N-methyltransferase SUV39H2 and hypothetical protein    Rv3717 ?
AND((Q21132932,P680,c(Q44424)), (Q22231685,P680,c(Q44424)))
action filter_type
action intersection
action find
entity Q21132932
relation P680
action find
entity Q22231685
relation P680
type Q44424
{'AND': [['Q21132932', 'P680', {'concept': 'Q44424'}], ['Q22231685', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?t WHERE { resource:Q21132932 property:P680 ?t . resource:Q22231685 property:P680 ?t . ?t rdf:type ontology:Q44424 }
hypothetical protein    Rv3717 Histone-lysine N-methyltransferase SUV39H2
action filter_type
action intersection
action find
entity Histone-lysine N-methyltransferase SUV39H2
relation molecular function
action find
entity hypothetical protein    Rv3717
relation molecular function
type chemical bond
{'AND': [['Histone-lysine N-methyltransferase SUV39H2', 'molecular function', {'concept': 'chemical bond'}], ['hypothetical protein    Rv3717', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?t WHERE { resource:Histone-lysine_N-methyltransferase_SUV39H2 property:molecular_function ?t . resource:hypothetical_protein____Rv3717 property:molecular_function ?t . ?t rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380
SYSTEM
metal ion binding
Q13667380
AND((Q21132932,P680,c(Q44424)), (Q22231685,P680,c(Q44424)))
action filter_type
action intersection
action find
entity Q21132932
relation P680
action find
entity Q22231685
relation P680
type Q44424
The [ANSWER] represent molecular function of Histone-lysine N-methyltransferase SUV39H2 and hypothetical protein Rv3717
{'AND': [['Q21132932', 'P680', {'concept': 'Q44424'}], ['Q22231685', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?t WHERE { resource:Q21132932 property:P680 ?t . resource:Q22231685 property:P680 ?t . ?t rdf:type ontology:Q44424 }
metal ion binding
The metal ion binding represent molecular function of Histone-lysine N-methyltransferase SUV39H2 and hypothetical protein Rv3717
metal ion binding
action filter_type
action intersection
action find
entity Histone-lysine N-methyltransferase SUV39H2
relation molecular function
action find
entity hypothetical protein    Rv3717
relation molecular function
type chemical bond
{'AND': [['Histone-lysine N-methyltransferase SUV39H2', 'molecular function', {'concept': 'chemical bond'}], ['hypothetical protein    Rv3717', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?t WHERE { resource:Histone-lysine_N-methyltransferase_SUV39H2 property:molecular_function ?t . resource:hypothetical_protein____Rv3717 property:molecular_function ?t . ?t rdf:type ontology:chemical_bond }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q24222582 Q21132932
P680
Q44424
USER
Which chemical bonds represents the molecular function of Histone-lysine N-methyltransferase SUV39H2 and nitrogen fixation protein    blr7496 ?
AND((Q21132932,P680,c(Q44424)), (Q24222582,P680,c(Q44424)))
action filter_type
action intersection
action find
entity Q21132932
relation P680
action find
entity Q24222582
relation P680
type Q44424
{'AND': [['Q21132932', 'P680', {'concept': 'Q44424'}], ['Q24222582', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q44424 . resource:Q24222582 property:P680 ?a . resource:Q21132932 property:P680 ?a }
nitrogen fixation protein    blr7496 Histone-lysine N-methyltransferase SUV39H2
action filter_type
action intersection
action find
entity Histone-lysine N-methyltransferase SUV39H2
relation molecular function
action find
entity nitrogen fixation protein    blr7496
relation molecular function
type chemical bond
{'AND': [['Histone-lysine N-methyltransferase SUV39H2', 'molecular function', {'concept': 'chemical bond'}], ['nitrogen fixation protein    blr7496', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:chemical_bond . resource:nitrogen_fixation_protein____blr7496 property:molecular_function ?a . resource:Histone-lysine_N-methyltransferase_SUV39H2 property:molecular_function ?a }
[]
chemical bond
Q14633865 Q13667380
SYSTEM
zinc ion binding, metal ion binding
Q14633865 Q13667380
AND((Q21132932,P680,c(Q44424)), (Q24222582,P680,c(Q44424)))
action filter_type
action intersection
action find
entity Q21132932
relation P680
action find
entity Q24222582
relation P680
type Q44424
The [ANSWERS] represent the molecular function of Histone-lysine N-methyltransferase SUV39H2 and nitrogen fixation protein blr7496
{'AND': [['Q21132932', 'P680', {'concept': 'Q44424'}], ['Q24222582', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q44424 . resource:Q24222582 property:P680 ?a . resource:Q21132932 property:P680 ?a }
zinc ion binding metal ion binding
The zinc ion binding and metal ion binding represent the molecular function of Histone-lysine N-methyltransferase SUV39H2 and nitrogen fixation protein blr7496
zinc ion binding metal ion binding
action filter_type
action intersection
action find
entity Histone-lysine N-methyltransferase SUV39H2
relation molecular function
action find
entity nitrogen fixation protein    blr7496
relation molecular function
type chemical bond
{'AND': [['Histone-lysine N-methyltransferase SUV39H2', 'molecular function', {'concept': 'chemical bond'}], ['nitrogen fixation protein    blr7496', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:chemical_bond . resource:nitrogen_fixation_protein____blr7496 property:molecular_function ?a . resource:Histone-lysine_N-methyltransferase_SUV39H2 property:molecular_function ?a }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q23441968
P680
Q181394
USER
Do hypothetical protein    VPA0632 have molecular function as those chemical bonds ?
(Q23441968,P680,Q14633865) (Q23441968,P680,Q13667380)
action is_in
entity prev_answer
action find
entity Q23441968
relation P680
['Q23441968', 'P680', 'Q14633865'] ['Q23441968', 'P680', 'Q13667380']
ASK WHERE { VALUES ( ?e ) { ( resource:Q14633865 ) ( resource:Q13667380 ) } . resource:Q23441968 property:P680 ?e }
hypothetical protein    VPA0632
action is_in
entity prev_answer
action find
entity hypothetical protein    VPA0632
relation molecular function
['hypothetical protein    VPA0632', 'molecular function', 'zinc ion binding'] ['hypothetical protein    VPA0632', 'molecular function', 'metal ion binding']
ASK WHERE { VALUES ( ?e ) { ( resource:zinc_ion_binding ) ( resource:metal_ion_binding ) } . resource:hypothetical_protein____VPA0632 property:molecular_function ?e }
[]
nutrient
SYSTEM
NO
(Q23441968,P680,Q14633865) (Q23441968,P680,Q13667380)
action is_in
entity prev_answer
action find
entity Q23441968
relation P680
[ANSWER]
['Q23441968', 'P680', 'Q14633865'] ['Q23441968', 'P680', 'Q13667380']
ASK WHERE { VALUES ( ?e ) { ( resource:Q14633865 ) ( resource:Q13667380 ) } . resource:Q23441968 property:P680 ?e }
No
action is_in
entity prev_answer
action find
entity hypothetical protein    VPA0632
relation molecular function
['hypothetical protein    VPA0632', 'molecular function', 'zinc ion binding'] ['hypothetical protein    VPA0632', 'molecular function', 'metal ion binding']
ASK WHERE { VALUES ( ?e ) { ( resource:zinc_ion_binding ) ( resource:metal_ion_binding ) } . resource:hypothetical_protein____VPA0632 property:molecular_function ?e }
[]