Simple Question (Direct)
Simple Question
Q21126613
P703
Q16521
USER
Where is Transmembrane protease serine 5 found ?
(Q21126613,P703,c(Q16521))
action filter_type
action find
entity Q21126613
relation P703
type Q16521
['Q21126613', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?z WHERE { resource:Q21126613 property:P703 ?z . ?z rdf:type ontology:Q16521 }
Transmembrane protease serine 5
action filter_type
action find
entity Transmembrane protease serine 5
relation found in taxon
type taxon
['Transmembrane protease serine 5', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?z WHERE { resource:Transmembrane_protease_serine_5 property:found_in_taxon ?z . ?z rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21126613,P703,c(Q16521))
action filter_type
action find
entity Q21126613
relation P703
type Q16521
Transmembrane protease serine 5 is found in [ANSWER]
['Q21126613', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?z WHERE { resource:Q21126613 property:P703 ?z . ?z rdf:type ontology:Q16521 }
Homo sapiens
Transmembrane protease serine 5 is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Transmembrane protease serine 5
relation found in taxon
type taxon
['Transmembrane protease serine 5', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?z WHERE { resource:Transmembrane_protease_serine_5 property:found_in_taxon ?z . ?z rdf:type ontology:taxon }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21126613
P688
Q863908
USER
Which nucleic acid sequence encodes Transmembrane protease serine 5 ?
(c(Q863908),P688,Q21126613)
action filter_type
action find_reverse
entity Q21126613
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21126613']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q21126613 . ?t rdf:type ontology:Q863908 }
Transmembrane protease serine 5
action filter_type
action find_reverse
entity Transmembrane protease serine 5
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Transmembrane protease serine 5']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:Transmembrane_protease_serine_5 . ?t rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18046831
SYSTEM
TMPRSS5
Q18046831
(c(Q863908),P688,Q21126613)
action filter_type
action find_reverse
entity Q21126613
relation P688
type Q863908
[ANSWER] encodes Transmembrane protease serine 5
[{'concept': 'Q863908'}, 'P688', 'Q21126613']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q21126613 . ?t rdf:type ontology:Q863908 }
TMPRSS5
TMPRSS5 encodes Transmembrane protease serine 5
TMPRSS5
action filter_type
action find_reverse
entity Transmembrane protease serine 5
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Transmembrane protease serine 5']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:Transmembrane_protease_serine_5 . ?t rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18046831
P684
Q863908
USER
What is an otrhologus gene for that one ?
(Q18046831,P684,c(Q863908))
action filter_type
action find
entity Q18046831
relation P684
type Q863908
['Q18046831', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?f WHERE { resource:Q18046831 property:P684 ?f . ?f rdf:type ontology:Q863908 }
TMPRSS5
action filter_type
action find
entity TMPRSS5
relation ortholog
type nucleic acid sequence
['TMPRSS5', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?f WHERE { resource:TMPRSS5 property:ortholog ?f . ?f rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18269743
SYSTEM
Tmprss5
Q18269743
(Q18046831,P684,c(Q863908))
action filter_type
action find
entity Q18046831
relation P684
type Q863908
An otrhologus gene for that one is the [ANSWER]
['Q18046831', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?f WHERE { resource:Q18046831 property:P684 ?f . ?f rdf:type ontology:Q863908 }
Tmprss5
An otrhologus gene for that one is the Tmprss5
Tmprss5
action filter_type
action find
entity TMPRSS5
relation ortholog
type nucleic acid sequence
['TMPRSS5', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?f WHERE { resource:TMPRSS5 property:ortholog ?f . ?f rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18269743
P702
Q181394
USER
What gene does that nucleic acid sequence encode ?
(c(Q181394),P702,Q18269743)
action filter_type
action find_reverse
entity Q18269743
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q18269743']
SELECT DISTINCT ?x WHERE { ?x property:P702 resource:Q18269743 . ?x rdf:type ontology:Q181394 }
Tmprss5
action filter_type
action find_reverse
entity Tmprss5
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Tmprss5']
SELECT DISTINCT ?x WHERE { ?x property:encoded_by resource:Tmprss5 . ?x rdf:type ontology:nutrient }
[]
nutrient
Q21990742
SYSTEM
Transmembrane protease serine 5
Q21990742
(c(Q181394),P702,Q18269743)
action filter_type
action find_reverse
entity Q18269743
relation P702
type Q181394
That nucleic acid sequence encodes the [ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q18269743']
SELECT DISTINCT ?x WHERE { ?x property:P702 resource:Q18269743 . ?x rdf:type ontology:Q181394 }
Transmembrane protease serine 5
That nucleic acid sequence encodes the Transmembrane protease serine 5
Transmembrane protease serine 5
action filter_type
action find_reverse
entity Tmprss5
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Tmprss5']
SELECT DISTINCT ?x WHERE { ?x property:encoded_by resource:Tmprss5 . ?x rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21990742
P681
Q15989253
USER
Which is the cell component of that nutrient ?
(Q21990742,P681,c(Q15989253))
action filter_type
action find
entity Q21990742
relation P681
type Q15989253
['Q21990742', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?a WHERE { resource:Q21990742 property:P681 ?a . ?a rdf:type ontology:Q15989253 }
Transmembrane protease serine 5
action filter_type
action find
entity Transmembrane protease serine 5
relation cell component
type part
['Transmembrane protease serine 5', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?a WHERE { resource:Transmembrane_protease_serine_5 property:cell_component ?a . ?a rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q21990742,P681,c(Q15989253))
action filter_type
action find
entity Q21990742
relation P681
type Q15989253
The [ANSWER] is the cell component of that nutrient
['Q21990742', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?a WHERE { resource:Q21990742 property:P681 ?a . ?a rdf:type ontology:Q15989253 }
membrane
The membrane is the cell component of that nutrient
membrane
action filter_type
action find
entity Transmembrane protease serine 5
relation cell component
type part
['Transmembrane protease serine 5', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?a WHERE { resource:Transmembrane_protease_serine_5 property:cell_component ?a . ?a rdf:type ontology:part }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q14349455 Q23495021
P681
Q181394
USER
Does hypothetical protein    spr1524 have that part as its cell component ?
(Q23495021,P681,Q14349455)
action is_in
entity Q23495021
action find
entity Q14349455
relation P681
['Q23495021', 'P681', 'Q14349455']
ASK WHERE { resource:Q14349455 property:P681 resource:Q23495021 }
membrane hypothetical protein    spr1524
action is_in
entity hypothetical protein    spr1524
action find
entity membrane
relation cell component
['hypothetical protein    spr1524', 'cell component', 'membrane']
ASK WHERE { resource:membrane property:cell_component resource:hypothetical_protein____spr1524 }
[]
nutrient
SYSTEM
NO
(Q23495021,P681,Q14349455)
action is_in
entity Q23495021
action find
entity Q14349455
relation P681
[ANSWER]
['Q23495021', 'P681', 'Q14349455']
ASK WHERE { resource:Q14349455 property:P681 resource:Q23495021 }
No
action is_in
entity hypothetical protein    spr1524
action find
entity membrane
relation cell component
['hypothetical protein    spr1524', 'cell component', 'membrane']
ASK WHERE { resource:membrane property:cell_component resource:hypothetical_protein____spr1524 }
[]