Simple Question (Direct)
Simple Question
Q21120277
P702
Q863908
USER
Which gene encodes Olfactory receptor 2A12 ?
(Q21120277,P702,c(Q863908))
action filter_type
action find
entity Q21120277
relation P702
type Q863908
['Q21120277', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?d WHERE { resource:Q21120277 property:P702 ?d . ?d rdf:type ontology:Q863908 }
Olfactory receptor 2A12
action filter_type
action find
entity Olfactory receptor 2A12
relation encoded by
type nucleic acid sequence
['Olfactory receptor 2A12', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?d WHERE { resource:Olfactory_receptor_2A12 property:encoded_by ?d . ?d rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18055668
SYSTEM
OR2A12
Q18055668
(Q21120277,P702,c(Q863908))
action filter_type
action find
entity Q21120277
relation P702
type Q863908
And [ANSWER] encodes Olfactory receptor 2A12
['Q21120277', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?d WHERE { resource:Q21120277 property:P702 ?d . ?d rdf:type ontology:Q863908 }
OR2A12
And OR2A12 encodes Olfactory receptor 2A12
OR2A12
action filter_type
action find
entity Olfactory receptor 2A12
relation encoded by
type nucleic acid sequence
['Olfactory receptor 2A12', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?d WHERE { resource:Olfactory_receptor_2A12 property:encoded_by ?d . ?d rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18055668
P684
Q863908
USER
What is the name of the species that has that one as its orthologous gene ?
(c(Q863908),P684,Q18055668)
action filter_type
action find
entity Q18055668
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18055668']
SELECT DISTINCT ?e WHERE { resource:Q18055668 property:P684 ?e . ?e rdf:type ontology:Q863908 }
OR2A12
action filter_type
action find
entity OR2A12
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'OR2A12']
SELECT DISTINCT ?e WHERE { resource:OR2A12 property:ortholog ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18299949
SYSTEM
Olfr446
Q18299949
(c(Q863908),P684,Q18055668)
action filter_type
action find
entity Q18055668
relation P684
type Q863908
The name of the species that has that one as its orthologous gene is [ANSWER]
[{'concept': 'Q863908'}, 'P684', 'Q18055668']
SELECT DISTINCT ?e WHERE { resource:Q18055668 property:P684 ?e . ?e rdf:type ontology:Q863908 }
Olfr446
The name of the species that has that one as its orthologous gene is Olfr446
Olfr446
action filter_type
action find
entity OR2A12
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'OR2A12']
SELECT DISTINCT ?e WHERE { resource:OR2A12 property:ortholog ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q14327652 Q18055668
P702 P681
Q181394
USER
Which nutrients are encoded by OR2A12 and have integral component of membrane as cell component ?
AND((c(Q181394),P702,Q18055668), (c(Q181394),P681,Q14327652))
action filter_type
action intersection
action find_reverse
entity Q18055668
relation P702
action find_reverse
entity Q14327652
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q18055668'], [{'concept': 'Q181394'}, 'P681', 'Q14327652']]}
SELECT DISTINCT ?o WHERE { ?o property:P702 resource:Q18055668 . ?o property:P681 resource:Q14327652 . ?o rdf:type ontology:Q181394 }
integral component of membrane OR2A12
action filter_type
action intersection
action find_reverse
entity OR2A12
relation encoded by
action find_reverse
entity integral component of membrane
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'OR2A12'], [{'concept': 'nutrient'}, 'cell component', 'integral component of membrane']]}
SELECT DISTINCT ?o WHERE { ?o property:encoded_by resource:OR2A12 . ?o property:cell_component resource:integral_component_of_membrane . ?o rdf:type ontology:nutrient }
[]
nutrient
Q21120277
SYSTEM
Olfactory receptor 2A12
Q21120277
AND((c(Q181394),P702,Q18055668), (c(Q181394),P681,Q14327652))
action filter_type
action intersection
action find_reverse
entity Q18055668
relation P702
action find_reverse
entity Q14327652
relation P681
type Q181394
Is [ANSWER] is encoded by OR2A12 and have integral component of membrane as cell component
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q18055668'], [{'concept': 'Q181394'}, 'P681', 'Q14327652']]}
SELECT DISTINCT ?o WHERE { ?o property:P702 resource:Q18055668 . ?o property:P681 resource:Q14327652 . ?o rdf:type ontology:Q181394 }
Olfactory receptor 2A12
Is Olfactory receptor 2A12 is encoded by OR2A12 and have integral component of membrane as cell component
Olfactory receptor 2A12
action filter_type
action intersection
action find_reverse
entity OR2A12
relation encoded by
action find_reverse
entity integral component of membrane
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'OR2A12'], [{'concept': 'nutrient'}, 'cell component', 'integral component of membrane']]}
SELECT DISTINCT ?o WHERE { ?o property:encoded_by resource:OR2A12 . ?o property:cell_component resource:integral_component_of_membrane . ?o rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q21120277 Q29548
P681
Q5058355
USER
Is plasma membrane a component of that nutrient ?
(Q21120277,P681,Q29548)
action is_in
entity Q29548
action find
entity Q21120277
relation P681
['Q21120277', 'P681', 'Q29548']
ASK WHERE { resource:Q21120277 property:P681 resource:Q29548 }
Olfactory receptor 2A12 plasma membrane
action is_in
entity plasma membrane
action find
entity Olfactory receptor 2A12
relation cell component
['Olfactory receptor 2A12', 'cell component', 'plasma membrane']
ASK WHERE { resource:Olfactory_receptor_2A12 property:cell_component resource:plasma_membrane }
[]
cellular component
SYSTEM
YES
(Q21120277,P681,Q29548)
action is_in
entity Q29548
action find
entity Q21120277
relation P681
[ANSWER]
['Q21120277', 'P681', 'Q29548']
ASK WHERE { resource:Q21120277 property:P681 resource:Q29548 }
Yes
action is_in
entity plasma membrane
action find
entity Olfactory receptor 2A12
relation cell component
['Olfactory receptor 2A12', 'cell component', 'plasma membrane']
ASK WHERE { resource:Olfactory_receptor_2A12 property:cell_component resource:plasma_membrane }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21120277
P703
Q16521
USER
Where is that nutrient found ?
action filter_type
action find
entity Q21120277
relation P703
type Q16521
SELECT DISTINCT ?h WHERE { resource:Q21120277 property:P703 ?h . ?h rdf:type ontology:Q16521 }
Olfactory receptor 2A12
action filter_type
action find
entity Olfactory receptor 2A12
relation found in taxon
type taxon
SELECT DISTINCT ?h WHERE { resource:Olfactory_receptor_2A12 property:found_in_taxon ?h . ?h rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
action filter_type
action find
entity Q21120277
relation P703
type Q16521
That nutrient is found in [ANSWER]
SELECT DISTINCT ?h WHERE { resource:Q21120277 property:P703 ?h . ?h rdf:type ontology:Q16521 }
Homo sapiens
That nutrient is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Olfactory receptor 2A12
relation found in taxon
type taxon
SELECT DISTINCT ?h WHERE { resource:Olfactory_receptor_2A12 property:found_in_taxon ?h . ?h rdf:type ontology:taxon }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q22160369 Q21120277
P681
Q5058355
USER
Which cellular components are the components of Olfactory receptor 2A12 or nitrate/nitrite sensor protein NarQ    ECIAI39_2606 ?
OR((Q21120277,P681,c(Q5058355)), (Q22160369,P681,c(Q5058355)))
action filter_type
action union
action find
entity Q21120277
relation P681
action find
entity Q22160369
relation P681
type Q5058355
{'OR': [['Q21120277', 'P681', {'concept': 'Q5058355'}], ['Q22160369', 'P681', {'concept': 'Q5058355'}]]}
SELECT DISTINCT ?d WHERE { { ?n property:P681 ?d . VALUES ( ?n ) { ( resource:Q21120277 ) ( resource:Q22160369 ) } } . ?d rdf:type ontology:Q5058355 }
nitrate/nitrite sensor protein NarQ    ECIAI39_2606 Olfactory receptor 2A12
action filter_type
action union
action find
entity Olfactory receptor 2A12
relation cell component
action find
entity nitrate/nitrite sensor protein NarQ    ECIAI39_2606
relation cell component
type cellular component
{'OR': [['Olfactory receptor 2A12', 'cell component', {'concept': 'cellular component'}], ['nitrate/nitrite sensor protein NarQ    ECIAI39_2606', 'cell component', {'concept': 'cellular component'}]]}
SELECT DISTINCT ?d WHERE { { ?n property:cell_component ?d . VALUES ( ?n ) { ( resource:Olfactory_receptor_2A12 ) ( resource:nitrate/nitrite_sensor_protein_NarQ____ECIAI39_2606 ) } } . ?d rdf:type ontology:cellular_component }
[]
cellular component
Q29548 Q3824358
SYSTEM
plasma membrane, intracellular
Q29548 Q3824358
OR((Q21120277,P681,c(Q5058355)), (Q22160369,P681,c(Q5058355)))
action filter_type
action union
action find
entity Q21120277
relation P681
action find
entity Q22160369
relation P681
type Q5058355
The [ANSWERS] are the components of Olfactory receptor 2A12 or nitrate/nitrite sensor protein NarQ ECIAI39_2606
{'OR': [['Q21120277', 'P681', {'concept': 'Q5058355'}], ['Q22160369', 'P681', {'concept': 'Q5058355'}]]}
SELECT DISTINCT ?d WHERE { { ?n property:P681 ?d . VALUES ( ?n ) { ( resource:Q21120277 ) ( resource:Q22160369 ) } } . ?d rdf:type ontology:Q5058355 }
plasma membrane intracellular
The plasma membrane and intracellular are the components of Olfactory receptor 2A12 or nitrate/nitrite sensor protein NarQ ECIAI39_2606
plasma membrane intracellular
action filter_type
action union
action find
entity Olfactory receptor 2A12
relation cell component
action find
entity nitrate/nitrite sensor protein NarQ    ECIAI39_2606
relation cell component
type cellular component
{'OR': [['Olfactory receptor 2A12', 'cell component', {'concept': 'cellular component'}], ['nitrate/nitrite sensor protein NarQ    ECIAI39_2606', 'cell component', {'concept': 'cellular component'}]]}
SELECT DISTINCT ?d WHERE { { ?n property:cell_component ?d . VALUES ( ?n ) { ( resource:Olfactory_receptor_2A12 ) ( resource:nitrate/nitrite_sensor_protein_NarQ____ECIAI39_2606 ) } } . ?d rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q29548 Q3824358
P361
Q5058355
USER
What are a component of plasma membrane and intracellular ?
(c(Q5058355),P361,Q29548) (c(Q5058355),P361,Q3824358)
action union
action filter_type
action find_reverse
entity Q29548
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q3824358
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', 'Q29548'] [{'concept': 'Q5058355'}, 'P361', 'Q3824358']
SELECT DISTINCT ?d WHERE { { ?d rdf:type ontology:Q5058355 . ?d property:P361 resource:Q29548 } UNION { ?d rdf:type ontology:Q5058355 . ?d property:P361 resource:Q3824358 } }
plasma membrane intracellular
action union
action filter_type
action find_reverse
entity plasma membrane
relation part of
type cellular component
action filter_type
action find_reverse
entity intracellular
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'plasma membrane'] [{'concept': 'cellular component'}, 'part of', 'intracellular']
SELECT DISTINCT ?d WHERE { { ?d rdf:type ontology:cellular_component . ?d property:part_of resource:plasma_membrane } UNION { ?d rdf:type ontology:cellular_component . ?d property:part_of resource:intracellular } }
[]
cellular component
Q22327518 Q22327343 Q14864977
SYSTEM
plasma membrane region, plasma membrane-derived photosystem I, plasma membrane part
Q14864977 Q22327518 Q22327343 Q14901717
(c(Q5058355),P361,Q29548) (c(Q5058355),P361,Q3824358)
action union
action filter_type
action find_reverse
entity Q29548
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q3824358
relation P361
type Q5058355
A component of plasma membrane and intracellular are the [ANSWERS]
[{'concept': 'Q5058355'}, 'P361', 'Q29548'] [{'concept': 'Q5058355'}, 'P361', 'Q3824358']
SELECT DISTINCT ?d WHERE { { ?d rdf:type ontology:Q5058355 . ?d property:P361 resource:Q29548 } UNION { ?d rdf:type ontology:Q5058355 . ?d property:P361 resource:Q3824358 } }
plasma membrane part plasma membrane region plasma membrane-derived photosystem I intracellular part
A component of plasma membrane and intracellular are the plasma membrane region, plasma membrane-derived photosystem I and plasma membrane part
plasma membrane region plasma membrane-derived photosystem I plasma membrane part
action union
action filter_type
action find_reverse
entity plasma membrane
relation part of
type cellular component
action filter_type
action find_reverse
entity intracellular
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'plasma membrane'] [{'concept': 'cellular component'}, 'part of', 'intracellular']
SELECT DISTINCT ?d WHERE { { ?d rdf:type ontology:cellular_component . ?d property:part_of resource:plasma_membrane } UNION { ?d rdf:type ontology:cellular_component . ?d property:part_of resource:intracellular } }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q22327518 Q22327343 Q14864977
P361
Q5058355
USER
Which cellular components are those ones a component of ?
(Q22327518,P361,c(Q5058355)) (Q22327343,P361,c(Q5058355)) (Q14864977,P361,c(Q5058355))
action filter_type
action find
entity prev_answer
relation P361
type Q5058355
['Q22327518', 'P361', {'concept': 'Q5058355'}] ['Q22327343', 'P361', {'concept': 'Q5058355'}] ['Q14864977', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?t WHERE { ?n property:P361 ?t . VALUES ( ?n ) { ( resource:Q14864977 ) ( resource:Q22327518 ) ( resource:Q22327343 ) } . ?t rdf:type ontology:Q5058355 }
plasma membrane region plasma membrane-derived photosystem I plasma membrane part
action filter_type
action find
entity prev_answer
relation part of
type cellular component
['plasma membrane region', 'part of', {'concept': 'cellular component'}] ['plasma membrane-derived photosystem I', 'part of', {'concept': 'cellular component'}] ['plasma membrane part', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?t WHERE { ?n property:part_of ?t . VALUES ( ?n ) { ( resource:plasma_membrane_part ) ( resource:plasma_membrane_region ) ( resource:plasma_membrane-derived_photosystem_I ) } . ?t rdf:type ontology:cellular_component }
[]
cellular component
Q29548 Q29548 Q29548
SYSTEM
plasma membrane
Q29548 Q14353100 Q29548 Q29548
(Q22327518,P361,c(Q5058355)) (Q22327343,P361,c(Q5058355)) (Q14864977,P361,c(Q5058355))
action filter_type
action find
entity prev_answer
relation P361
type Q5058355
And [ANSWER], [ANSWER] and [ANSWER] are those ones a component of
['Q22327518', 'P361', {'concept': 'Q5058355'}] ['Q22327343', 'P361', {'concept': 'Q5058355'}] ['Q14864977', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?t WHERE { ?n property:P361 ?t . VALUES ( ?n ) { ( resource:Q14864977 ) ( resource:Q22327518 ) ( resource:Q22327343 ) } . ?t rdf:type ontology:Q5058355 }
plasma membrane cell projection plasma membrane plasma membrane
And plasma membrane, plasma membrane and plasma membrane are those ones a component of
plasma membrane plasma membrane plasma membrane
action filter_type
action find
entity prev_answer
relation part of
type cellular component
['plasma membrane region', 'part of', {'concept': 'cellular component'}] ['plasma membrane-derived photosystem I', 'part of', {'concept': 'cellular component'}] ['plasma membrane part', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?t WHERE { ?n property:part_of ?t . VALUES ( ?n ) { ( resource:plasma_membrane_part ) ( resource:plasma_membrane_region ) ( resource:plasma_membrane-derived_photosystem_I ) } . ?t rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21120277
P682
Q3249551
USER
Which process is Olfactory receptor 2A12 involved in ?
(Q21120277,P682,c(Q3249551))
action filter_type
action find
entity Q21120277
relation P682
type Q3249551
['Q21120277', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q3249551 . resource:Q21120277 property:P682 ?t }
Olfactory receptor 2A12
action filter_type
action find
entity Olfactory receptor 2A12
relation biological process
type process
['Olfactory receptor 2A12', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:process . resource:Olfactory_receptor_2A12 property:biological_process ?t }
[]
process
Q14859560
SYSTEM
response to stimulus
Q14859560
(Q21120277,P682,c(Q3249551))
action filter_type
action find
entity Q21120277
relation P682
type Q3249551
Which process is Olfactory receptor 2A12 involved in
['Q21120277', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q3249551 . resource:Q21120277 property:P682 ?t }
response to stimulus
Which process is Olfactory receptor 2A12 involved in
response to stimulus
action filter_type
action find
entity Olfactory receptor 2A12
relation biological process
type process
['Olfactory receptor 2A12', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:process . resource:Olfactory_receptor_2A12 property:biological_process ?t }
[]