Simple Question (Direct)
Simple Question
Q21123364
P703
Q16521
USER
Which taxon is Rhox homeobox family member 1 found in ?
(Q21123364,P703,c(Q16521))
action filter_type
action find
entity Q21123364
relation P703
type Q16521
['Q21123364', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?s WHERE { resource:Q21123364 property:P703 ?s . ?s rdf:type ontology:Q16521 }
Rhox homeobox family member 1
action filter_type
action find
entity Rhox homeobox family member 1
relation found in taxon
type taxon
['Rhox homeobox family member 1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?s WHERE { resource:Rhox_homeobox_family_member_1 property:found_in_taxon ?s . ?s rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21123364,P703,c(Q16521))
action filter_type
action find
entity Q21123364
relation P703
type Q16521
Rhox homeobox family member 1 is found in [ANSWER]
['Q21123364', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?s WHERE { resource:Q21123364 property:P703 ?s . ?s rdf:type ontology:Q16521 }
Homo sapiens
Rhox homeobox family member 1 is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Rhox homeobox family member 1
relation found in taxon
type taxon
['Rhox homeobox family member 1', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?s WHERE { resource:Rhox_homeobox_family_member_1 property:found_in_taxon ?s . ?s rdf:type ontology:taxon }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21123364
P702
Q863908
USER
Which nucleic acid sequence encodes Rhox homeobox family member 1 ?
(Q21123364,P702,c(Q863908))
action filter_type
action find
entity Q21123364
relation P702
type Q863908
['Q21123364', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?k WHERE { resource:Q21123364 property:P702 ?k . ?k rdf:type ontology:Q863908 }
Rhox homeobox family member 1
action filter_type
action find
entity Rhox homeobox family member 1
relation encoded by
type nucleic acid sequence
['Rhox homeobox family member 1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?k WHERE { resource:Rhox_homeobox_family_member_1 property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18052424
SYSTEM
RHOXF1
Q18052424
(Q21123364,P702,c(Q863908))
action filter_type
action find
entity Q21123364
relation P702
type Q863908
[ANSWER] encodes Rhox homeobox family member 1
['Q21123364', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?k WHERE { resource:Q21123364 property:P702 ?k . ?k rdf:type ontology:Q863908 }
RHOXF1
RHOXF1 encodes Rhox homeobox family member 1
RHOXF1
action filter_type
action find
entity Rhox homeobox family member 1
relation encoded by
type nucleic acid sequence
['Rhox homeobox family member 1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?k WHERE { resource:Rhox_homeobox_family_member_1 property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21123364
P681
Q15989253
USER
Which part is a component of that nutrient ?
(Q18052424,P681,c(Q15989253))
action filter_type
action find
entity Q21123364
relation P681
type Q15989253
['Q18052424', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q21123364 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
Rhox homeobox family member 1
action filter_type
action find
entity Rhox homeobox family member 1
relation cell component
type part
['RHOXF1', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:Rhox_homeobox_family_member_1 property:cell_component ?s . ?s rdf:type ontology:part }
[]
part
Q40260
SYSTEM
nucleus
Q40260
(Q18052424,P681,c(Q15989253))
action filter_type
action find
entity Q21123364
relation P681
type Q15989253
[ANSWER] is a component of that nutrient
['Q18052424', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q21123364 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
nucleus
Nucleus is a component of that nutrient
nucleus
action filter_type
action find
entity Rhox homeobox family member 1
relation cell component
type part
['RHOXF1', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:Rhox_homeobox_family_member_1 property:cell_component ?s . ?s rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q24135957 Q21123364
P688
Q863908
USER
Which nucleic acid sequences encodes Rhox homeobox family member 1 or chemotaxis-specific methylesterase    ECL_01415 ?
OR((c(Q863908),P688,Q21123364), (c(Q863908),P688,Q24135957))
action filter_type
action union
action find_reverse
entity Q21123364
relation P688
action find_reverse
entity Q24135957
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q21123364'], [{'concept': 'Q863908'}, 'P688', 'Q24135957']]}
SELECT DISTINCT ?v WHERE { { ?v property:P688 ?s . VALUES ( ?s ) { ( resource:Q21123364 ) ( resource:Q24135957 ) } } . ?v rdf:type ontology:Q863908 }
chemotaxis-specific methylesterase    ECL_01415 Rhox homeobox family member 1
action filter_type
action union
action find_reverse
entity Rhox homeobox family member 1
relation encodes
action find_reverse
entity chemotaxis-specific methylesterase    ECL_01415
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Rhox homeobox family member 1'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'chemotaxis-specific methylesterase    ECL_01415']]}
SELECT DISTINCT ?v WHERE { { ?v property:encodes ?s . VALUES ( ?s ) { ( resource:Rhox_homeobox_family_member_1 ) ( resource:chemotaxis-specific_methylesterase____ECL_01415 ) } } . ?v rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18052424 Q23084155
SYSTEM
RHOXF1, chemotaxis-specific methylesterase    ECL_01415
Q18052424 Q23084155
OR((c(Q863908),P688,Q21123364), (c(Q863908),P688,Q24135957))
action filter_type
action union
action find_reverse
entity Q21123364
relation P688
action find_reverse
entity Q24135957
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q21123364'], [{'concept': 'Q863908'}, 'P688', 'Q24135957']]}
SELECT DISTINCT ?v WHERE { { ?v property:P688 ?s . VALUES ( ?s ) { ( resource:Q21123364 ) ( resource:Q24135957 ) } } . ?v rdf:type ontology:Q863908 }
RHOXF1 chemotaxis-specific methylesterase    ECL_01415
RHOXF1 and chemotaxis-specific methylesterase ECL 01415 encode Rhox homeobox family member 1 or chemotaxis-specific methylesterase ECL_01415
RHOXF1 chemotaxis-specific methylesterase    ECL_01415
action filter_type
action union
action find_reverse
entity Rhox homeobox family member 1
relation encodes
action find_reverse
entity chemotaxis-specific methylesterase    ECL_01415
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Rhox homeobox family member 1'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'chemotaxis-specific methylesterase    ECL_01415']]}
SELECT DISTINCT ?v WHERE { { ?v property:encodes ?s . VALUES ( ?s ) { ( resource:Rhox_homeobox_family_member_1 ) ( resource:chemotaxis-specific_methylesterase____ECL_01415 ) } } . ?v rdf:type ontology:nucleic_acid_sequence }
[]
Clarification
Quantitative|Count|Single entity type|Indirect
P703
Q631147
USER
How many infraspecific names are the taxon to which that nucleic acid sequence belongs to ?
(Q23084155,P703,c(Q631147))
['Q23084155', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q24135957 property:P703 ?z . ?z rdf:type ontology:Q631147 }
['chemotaxis-specific methylesterase    ECL_01415', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:chemotaxis-specific_methylesterase____ECL_01415 property:found_in_taxon ?z . ?z rdf:type ontology:infraspecific_name }
[]
infraspecific name
Quantitative|Count|Single entity type|Clarification
Q23084155
SYSTEM
Did you mean chemotaxis-specific methylesterase    ECL_01415 ?
(Q18052424,P703,c(Q631147)) (Q23084155,P703,c(Q631147))
[ANSWER]
['Q18052424', 'P703', {'concept': 'Q631147'}] ['Q23084155', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q24135957 property:P703 ?z . ?z rdf:type ontology:Q631147 }
Did you mean chemotaxis-specific methylesterase    ECL_01415 ?
chemotaxis-specific methylesterase    ECL_01415
['RHOXF1', 'found in taxon', {'concept': 'infraspecific name'}] ['chemotaxis-specific methylesterase    ECL_01415', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:chemotaxis-specific_methylesterase____ECL_01415 property:found_in_taxon ?z . ?z rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
USER
Yes
(Q23084155,P703,c(Q631147))
['Q23084155', 'P703', {'concept': 'Q631147'}]
['chemotaxis-specific methylesterase    ECL_01415', 'found in taxon', {'concept': 'infraspecific name'}]
[]
SYSTEM
1
Q21102928
(Q23084155,P703,c(Q631147))
[ANSWER]
['Q23084155', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:Q24135957 property:P703 ?z . ?z rdf:type ontology:Q631147 }
Enterobacter cloacae subsp. cloacae ATCC 13047
1
['chemotaxis-specific methylesterase    ECL_01415', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?y ) WHERE { resource:chemotaxis-specific_methylesterase____ECL_01415 property:found_in_taxon ?z . ?z rdf:type ontology:infraspecific_name }
[]