Simple Question (Direct)
Simple Question
Q21126901
P681
Q5058355
USER
Which cellular components are components of Ras-related protein Rab-8B ?
(Q21126901,P681,c(Q5058355))
action filter_type
action find
entity Q21126901
relation P681
type Q5058355
['Q21126901', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?x WHERE { resource:Q21126901 property:P681 ?x . ?x rdf:type ontology:Q5058355 }
Ras-related protein Rab-8B
action filter_type
action find
entity Ras-related protein Rab-8B
relation cell component
type cellular component
['Ras-related protein Rab-8B', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?x WHERE { resource:Ras-related_protein_Rab-8B property:cell_component ?x . ?x rdf:type ontology:cellular_component }
[]
cellular component
Q29548 Q21126899
SYSTEM
plasma membrane, cell tip
Q29548 Q21126899
(Q21126901,P681,c(Q5058355))
action filter_type
action find
entity Q21126901
relation P681
type Q5058355
Protein [ANSWERS] are components of Ras-related protein Rab-8B
['Q21126901', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?x WHERE { resource:Q21126901 property:P681 ?x . ?x rdf:type ontology:Q5058355 }
plasma membrane cell tip
Protein plasma membrane and cell tip are components of Ras-related protein Rab-8B
plasma membrane cell tip
action filter_type
action find
entity Ras-related protein Rab-8B
relation cell component
type cellular component
['Ras-related protein Rab-8B', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?x WHERE { resource:Ras-related_protein_Rab-8B property:cell_component ?x . ?x rdf:type ontology:cellular_component }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21126901
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q29548) (c(Q863908),P688,Q21126899)
action filter_type
action find_reverse
entity Q21126901
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q29548'] [{'concept': 'Q863908'}, 'P688', 'Q21126899']
SELECT DISTINCT ?v WHERE { ?v property:P688 resource:Q21126901 . ?v rdf:type ontology:Q863908 }
Ras-related protein Rab-8B
action filter_type
action find_reverse
entity Ras-related protein Rab-8B
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'plasma membrane'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'cell tip']
SELECT DISTINCT ?v WHERE { ?v property:encodes resource:Ras-related_protein_Rab-8B . ?v rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18040563
SYSTEM
RAB8B
Q18040563
(c(Q863908),P688,Q29548) (c(Q863908),P688,Q21126899)
action filter_type
action find_reverse
entity Q21126901
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q29548'] [{'concept': 'Q863908'}, 'P688', 'Q21126899']
SELECT DISTINCT ?v WHERE { ?v property:P688 resource:Q21126901 . ?v rdf:type ontology:Q863908 }
RAB8B
RAB8B encodes that nutrient
RAB8B
action filter_type
action find_reverse
entity Ras-related protein Rab-8B
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'plasma membrane'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'cell tip']
SELECT DISTINCT ?v WHERE { ?v property:encodes resource:Ras-related_protein_Rab-8B . ?v rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q79529 Q181394
USER
How many nutrients do approximately 7 chemical substances or nutrients interact with ?
(c(Q79529)|c(Q181394),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 7
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?b ) WHERE { { SELECT DISTINCT ?k ( COUNT ( ?z ) AS ?p ) WHERE { { ?z property:P129 ?k . ?k rdf:type ontology:Q181394 . ?z rdf:type ontology:Q181394 } UNION { ?z property:P129 ?k . ?k rdf:type ontology:Q181394 . ?z rdf:type ontology:Q79529 } } GROUP BY ?k } . FILTER ( ?p = 7 ) }
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 7
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?b ) WHERE { { SELECT DISTINCT ?k ( COUNT ( ?z ) AS ?p ) WHERE { { ?z property:physically_interacts_with ?k . ?k rdf:type ontology:nutrient . ?z rdf:type ontology:nutrient } UNION { ?z property:physically_interacts_with ?k . ?k rdf:type ontology:nutrient . ?z rdf:type ontology:chemical_substance } } GROUP BY ?k } . FILTER ( ?p = 7 ) }
[]
nutrient chemical substance nutrient
SYSTEM
162
Q21115605 Q14872770 Q309513 Q21173427 Q12746346 Q21108695 Q21123087 Q413209 Q287961 Q2663095 Q21107052 Q21154358 Q21147674 Q21113310 Q21113313 Q21113170 Q21113172 Q21113176 Q21118071 Q21107107 Q21108624 Q21172390 Q21990430 Q1486720 Q4789588 Q4789584 Q4789587 Q287958 Q5500227 Q1084878 Q6589868 Q21123083 Q14900999 Q7671479 Q7169506 Q21109365 Q5323823 Q21107439 Q21110867 Q21103155 Q21122995 Q21112081 Q511968 Q21103207 Q7671495 Q21121815 Q416601 Q5512777 Q5401857 Q4734884 Q4734887 Q4734886 Q21113101 Q21113100 Q21988386 Q424031 Q21173381 Q21497941 Q21102511 Q21126779 Q21126777 Q21116164 Q21113155 Q5773155 Q5500222 Q21118353 Q21121807 Q4822491 Q21113173 Q21173406 Q411978 Q4859538 Q909409 Q5513985 Q21109298 Q21115954 Q4734894 Q4734892 Q21103146 Q3454525 Q4734891 Q21118072 Q21113158 Q21107088 Q21113152 Q21131500 Q5500223 Q21132004 Q21114845 Q21991520 Q6590408 Q21132652 Q6594119 Q7671468 Q7671469 Q21100975 Q4897175 Q7673856 Q21118862 Q21126833 Q21110936 Q21115961 Q21115962 Q21115965 Q21113115 Q418404 Q21498709 Q6534535 Q311568 Q21173485 Q5773160 Q6590443 Q21122997 Q21125253 Q12746120 Q11071075 Q4822488 Q5629167 Q21115815 Q21115816 Q21115819 Q21108125 Q415271 Q21114585 Q21497939 Q3454531 Q21497937 Q21497936 Q21122433 Q21122435 Q3162114 Q21113169 Q21113168 Q424401 Q5009781 Q21113161 Q21119822 Q21172800 Q21173206 Q21173207 Q21114850 Q21174141 Q21130911 Q7119501 Q21118676 Q15324694 Q21108701 Q21201294 Q7671477 Q21113099 Q21110922 Q21113292 Q21498666 Q21109359 Q7120338 Q21983336 Q21121816 Q6589190 Q6155967 Q15324415 Q2356259 Q21113127
(c(Q79529)|c(Q181394),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 7
[ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?b ) WHERE { { SELECT DISTINCT ?k ( COUNT ( ?z ) AS ?p ) WHERE { { ?z property:P129 ?k . ?k rdf:type ontology:Q181394 . ?z rdf:type ontology:Q181394 } UNION { ?z property:P129 ?k . ?k rdf:type ontology:Q181394 . ?z rdf:type ontology:Q79529 } } GROUP BY ?k } . FILTER ( ?p = 7 ) }
Vascular endothelial growth factor receptor 1 Histamine H4 receptor Histamine H1 receptor Histone deacetylase 9 Nociceptin receptor G-protein coupled receptor 84 Neuromedin-K receptor Transient receptor potential cation channel subfamily V member 1 Beta-2 adrenergic receptor Glucocorticoid receptor Gap junction alpha-4 protein Histone deacetylase 3 Estrogen-related receptor gamma Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit rho-2 Gap junction delta-3 protein Gap junction delta-4 protein Gap junction delta-2 protein Steroid hormone receptor ERR2 Gap junction alpha-3 protein Platelet-derived growth factor receptor beta Vascular endothelial growth factor receptor 2 P2Y purinoceptor 14 Glutamate receptor 3 Vasopressin V2 receptor Vasopressin V1a receptor Vasopressin V1b receptor Beta-1 adrenergic receptor Free fatty acid receptor 3 Peroxisome proliferator-activated receptor gamma Metabotropic glutamate receptor 6 Substance-K receptor Kappa-type opioid receptor Transient receptor potential cation channel subfamily M member 3 Peroxisome proliferator-activated receptor alpha 5-hydroxytryptamine receptor 4 Histone acetyltransferase p300 Farnesyl pyrophosphate synthase D(1A) dopamine receptor Glycine receptor subunit alpha-1 Melatonin receptor type 1A Gap junction gamma-3 protein Cyclin-dependent kinase 2 G-protein coupled bile acid receptor 1 Transient receptor potential cation channel subfamily M member 8 P2Y purinoceptor 11 Androgen receptor Gamma-aminobutyric acid receptor subunit alpha-4 Estrogen receptor beta Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor Alpha-1B adrenergic receptor Gap junction beta-6 protein Gap junction beta-5 protein Delta-type opioid receptor Mevalonate kinase Histone deacetylase 6 5-hydroxytryptamine receptor 4 Platelet-derived growth factor receptor alpha P2Y purinoceptor 4 P2Y purinoceptor 2 Adenosine receptor A2b Gap junction gamma-1 protein Histone deacetylase 2 Free fatty acid receptor 1 Vascular endothelial growth factor receptor 3 P2Y purinoceptor 14 Aurora kinase B Gap junction beta-4 protein Histone deacetylase 8 Thromboxane A2 receptor Metabotropic glutamate receptor 2 Mast/stem cell growth factor receptor Kit Gonadotropin-releasing hormone receptor Protein kinase C epsilon type Glycine receptor subunit alpha-2 Alpha-2B adrenergic receptor Alpha-2A adrenergic receptor Glycine receptor subunit alpha-3 Progesterone receptor Alpha-2C adrenergic receptor Steroid hormone receptor ERR1 Gap junction alpha-8 protein Gap junction alpha-10 protein Gap junction alpha-5 protein D(1B) dopamine receptor Free fatty acid receptor 2 Endothelin-1 receptor Protein kinase C gamma type Trace amine-associated receptor 1 Metabotropic glutamate receptor 8 Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Short transient receptor potential channel 5 Short transient receptor potential channel 6 Macrophage colony-stimulating factor 1 receptor Beta-3 adrenergic receptor Substance-P receptor Glutamate receptor ionotropic, NMDA 1 Polycystic kidney disease 2-like 1 protein G-protein coupled receptor 35 Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Gap junction beta-1 protein C-C chemokine receptor type 5 Adenosine receptor A2b Leukotriene B4 receptor 2 Histamine H2 receptor Hydroxycarboxylic acid receptor 2 Histone deacetylase 5 Oxytocin receptor Melatonin receptor type 1B Solute carrier organic anion transporter family member 1B1 Muscarinic acetylcholine receptor M5 Trace amine-associated receptor 1 Aurora kinase A Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C 5-hydroxytryptamine receptor 3A Receptor tyrosine-protein kinase erbB-2 Gamma-aminobutyric acid receptor subunit alpha-6 5-hydroxytryptamine receptor 7 Mineralocorticoid receptor 5-hydroxytryptamine receptor 5A 5-hydroxytryptamine receptor 3A Orexin receptor type 1 Orexin receptor type 2 Tyrosine-protein kinase JAK2 Gap junction beta-7 protein Gap junction gamma-2 protein Epidermal growth factor receptor Receptor-type tyrosine-protein kinase FLT3 Gap junction alpha-9 protein Inward rectifier potassium channel 4 Free fatty acid receptor 4 Histone deacetylase 4 Histone deacetylase 7 Protein kinase C beta type Prostaglandin D2 receptor 2 Glutamate receptor ionotropic, NMDA 2D Protein kinase C alpha type Melanocortin receptor 4 Transient receptor potential cation channel subfamily V member 3 Glutamate receptor ionotropic, kainate 1 Cannabinoid receptor 1 Transient receptor potential cation channel subfamily M member 2 Gap junction beta-3 protein N-arachidonyl glycine receptor Gamma-aminobutyric acid receptor subunit rho-3 5-hydroxytryptamine receptor 1B 5-hydroxytryptamine receptor 5A Protein kinase C delta type Histamine H3 receptor P2Y purinoceptor 13 Metabotropic glutamate receptor 5 Tyrosine-protein kinase JAK1 Transient receptor potential cation channel subfamily M member 8 Gap junction alpha-1 protein Gap junction beta-2 protein
162
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 7
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?b ) WHERE { { SELECT DISTINCT ?k ( COUNT ( ?z ) AS ?p ) WHERE { { ?z property:physically_interacts_with ?k . ?k rdf:type ontology:nutrient . ?z rdf:type ontology:nutrient } UNION { ?z property:physically_interacts_with ?k . ?k rdf:type ontology:nutrient . ?z rdf:type ontology:chemical_substance } } GROUP BY ?k } . FILTER ( ?p = 7 ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18040563
P703
Q16521
USER
Where is RAB8B found ?
(Q18040563,P703,c(Q16521))
action filter_type
action find
entity Q18040563
relation P703
type Q16521
['Q18040563', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?q WHERE { resource:Q18040563 property:P703 ?q . ?q rdf:type ontology:Q16521 }
RAB8B
action filter_type
action find
entity RAB8B
relation found in taxon
type taxon
['RAB8B', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?q WHERE { resource:RAB8B property:found_in_taxon ?q . ?q rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q18040563,P703,c(Q16521))
action filter_type
action find
entity Q18040563
relation P703
type Q16521
RAB8 B is found in [ANSWER]
['Q18040563', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?q WHERE { resource:Q18040563 property:P703 ?q . ?q rdf:type ontology:Q16521 }
Homo sapiens
RAB8 B is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity RAB8B
relation found in taxon
type taxon
['RAB8B', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?q WHERE { resource:RAB8B property:found_in_taxon ?q . ?q rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18040563
P684
Q863908
USER
What is an otrhologus gene for that one ?
(Q15978631,P684,c(Q863908))
action filter_type
action find
entity Q18040563
relation P684
type Q863908
['Q15978631', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?h WHERE { resource:Q18040563 property:P684 ?h . ?h rdf:type ontology:Q863908 }
RAB8B
action filter_type
action find
entity RAB8B
relation ortholog
type nucleic acid sequence
['Homo sapiens', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?h WHERE { resource:RAB8B property:ortholog ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18298447
SYSTEM
Rab8b
Q18298447
(Q15978631,P684,c(Q863908))
action filter_type
action find
entity Q18040563
relation P684
type Q863908
An otrhologus gene for that one is a [ANSWER]
['Q15978631', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?h WHERE { resource:Q18040563 property:P684 ?h . ?h rdf:type ontology:Q863908 }
Rab8b
An otrhologus gene for that one is a Rab8b
Rab8b
action filter_type
action find
entity RAB8B
relation ortholog
type nucleic acid sequence
['Homo sapiens', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?h WHERE { resource:RAB8B property:ortholog ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18298447
P702
Q181394
USER
Which nutrient is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q18298447)
action filter_type
action find_reverse
entity Q18298447
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q18298447']
SELECT DISTINCT ?o WHERE { ?o property:P702 resource:Q18298447 . ?o rdf:type ontology:Q181394 }
Rab8b
action filter_type
action find_reverse
entity Rab8b
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Rab8b']
SELECT DISTINCT ?o WHERE { ?o property:encoded_by resource:Rab8b . ?o rdf:type ontology:nutrient }
[]
nutrient
Q21986367
SYSTEM
Ras-related protein Rab-8B
Q21986367
(c(Q181394),P702,Q18298447)
action filter_type
action find_reverse
entity Q18298447
relation P702
type Q181394
The [ANSWER] is encoded by that nucleic acid sequence
[{'concept': 'Q181394'}, 'P702', 'Q18298447']
SELECT DISTINCT ?o WHERE { ?o property:P702 resource:Q18298447 . ?o rdf:type ontology:Q181394 }
Ras-related protein Rab-8B
The Ras-related protein Rab-8B is encoded by that nucleic acid sequence
Ras-related protein Rab-8B
action filter_type
action find_reverse
entity Rab8b
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Rab8b']
SELECT DISTINCT ?o WHERE { ?o property:encoded_by resource:Rab8b . ?o rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q29548 Q18040563
P702 P681
Q181394
USER
Which nutrients are the gene that are encoded by RAB8B and are plasma membrane a cell component of ?
AND((c(Q181394),P702,Q18040563), (c(Q181394),P681,Q29548))
action filter_type
action intersection
action find_reverse
entity Q18040563
relation P702
action find_reverse
entity Q29548
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q18040563'], [{'concept': 'Q181394'}, 'P681', 'Q29548']]}
SELECT DISTINCT ?v WHERE { ?v property:P681 resource:Q29548 . ?v property:P702 resource:Q18040563 . ?v rdf:type ontology:Q181394 }
plasma membrane RAB8B
action filter_type
action intersection
action find_reverse
entity RAB8B
relation encoded by
action find_reverse
entity plasma membrane
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'RAB8B'], [{'concept': 'nutrient'}, 'cell component', 'plasma membrane']]}
SELECT DISTINCT ?v WHERE { ?v property:cell_component resource:plasma_membrane . ?v property:encoded_by resource:RAB8B . ?v rdf:type ontology:nutrient }
[]
nutrient
Q21126901
SYSTEM
Ras-related protein Rab-8B
Q21126901
AND((c(Q181394),P702,Q18040563), (c(Q181394),P681,Q29548))
action filter_type
action intersection
action find_reverse
entity Q18040563
relation P702
action find_reverse
entity Q29548
relation P681
type Q181394
The [ANSWER] is the gene that is encoded by RAB8B and is plasma membrane a cell component of
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q18040563'], [{'concept': 'Q181394'}, 'P681', 'Q29548']]}
SELECT DISTINCT ?v WHERE { ?v property:P681 resource:Q29548 . ?v property:P702 resource:Q18040563 . ?v rdf:type ontology:Q181394 }
Ras-related protein Rab-8B
The Ras-related protein Rab-8B is the gene that is encoded by RAB8B and is plasma membrane a cell component of
Ras-related protein Rab-8B
action filter_type
action intersection
action find_reverse
entity RAB8B
relation encoded by
action find_reverse
entity plasma membrane
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'RAB8B'], [{'concept': 'nutrient'}, 'cell component', 'plasma membrane']]}
SELECT DISTINCT ?v WHERE { ?v property:cell_component resource:plasma_membrane . ?v property:encoded_by resource:RAB8B . ?v rdf:type ontology:nutrient }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q14901717
P361
Q15989253 Q223557 Q5058355
USER
Which cellular components are a component of more number of parts or physical objects than intracellular part ?
(c(Q5058355),P361,c(Q15989253)|c(Q223557))
action greater
action union
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action find_tuple_counts
relation P361
type Q5058355
type Q223557
action count
action filter_multi_types
action find
entity Q14901717
relation P361
type Q15989253
type Q223557
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q15989253'}, {'concept': 'Q223557'}]]
SELECT DISTINCT ?a WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?q ) WHERE { resource:Q14901717 property:P361 ?w . { { ?w rdf:type ontology:Q15989253 } UNION { ?w rdf:type ontology:Q223557 } } } } . FILTER ( ?i > ?q ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?i ) ?a WHERE { { ?o rdf:type ontology:Q15989253 . ?a rdf:type ontology:Q5058355 . ?a property:P361 ?o } UNION { ?a property:P361 ?o . ?a rdf:type ontology:Q5058355 . ?o rdf:type ontology:Q223557 } } GROUP BY ?a } }
intracellular part
action greater
action union
action find_tuple_counts
relation part of
type cellular component
type part
action find_tuple_counts
relation part of
type cellular component
type physical object
action count
action filter_multi_types
action find
entity intracellular part
relation part of
type part
type physical object
[{'concept': 'cellular component'}, 'part of', [{'concept': 'part'}, {'concept': 'physical object'}]]
SELECT DISTINCT ?a WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?q ) WHERE { resource:intracellular_part property:part_of ?w . { { ?w rdf:type ontology:part } UNION { ?w rdf:type ontology:physical_object } } } } . FILTER ( ?i > ?q ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?i ) ?a WHERE { { ?o rdf:type ontology:part . ?a rdf:type ontology:cellular_component . ?a property:part_of ?o } UNION { ?a property:part_of ?o . ?a rdf:type ontology:cellular_component . ?o rdf:type ontology:physical_object } } GROUP BY ?a } }
[]
part physical object cellular component
Q14912978 Q22329076 Q22326356
SYSTEM
mitochondrial nucleoid, plastid nucleoid, membrane protein complex
Q14912978 Q22326356 Q22327622 Q22327479 Q22327475 Q22326870 Q14914004 Q15320191 Q22328035 Q22329249 Q22327061 Q22326951 Q22328884 Q22328762 Q22327083 Q14873267 Q22329076 Q2914458 Q193825 Q22327423
(c(Q5058355),P361,c(Q15989253)|c(Q223557))
action greater
action union
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action find_tuple_counts
relation P361
type Q5058355
type Q223557
action count
action filter_multi_types
action find
entity Q14901717
relation P361
type Q15989253
type Q223557
The [ANSWERS] are a component of more number of parts or physical objects than intracellular part
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q15989253'}, {'concept': 'Q223557'}]]
SELECT DISTINCT ?a WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?q ) WHERE { resource:Q14901717 property:P361 ?w . { { ?w rdf:type ontology:Q15989253 } UNION { ?w rdf:type ontology:Q223557 } } } } . FILTER ( ?i > ?q ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?i ) ?a WHERE { { ?o rdf:type ontology:Q15989253 . ?a rdf:type ontology:Q5058355 . ?a property:P361 ?o } UNION { ?a property:P361 ?o . ?a rdf:type ontology:Q5058355 . ?o rdf:type ontology:Q223557 } } GROUP BY ?a } }
mitochondrial nucleoid membrane protein complex side of membrane presynapse postsynapse DAPK1-calmodulin complex synaptic membrane synaptic cleft organelle lumen virion nucleoid extracellular isoamylase complex oxidoreductase complex organellar ribosome Dxr protein complex PTEN phosphatase complex cell-cell junction plastid nucleoid extracellular space extracellular matrix extracellular organelle
The mitochondrial nucleoid, plastid nucleoid and membrane protein complex are a component of more number of parts or physical objects than intracellular part
mitochondrial nucleoid plastid nucleoid membrane protein complex
action greater
action union
action find_tuple_counts
relation part of
type cellular component
type part
action find_tuple_counts
relation part of
type cellular component
type physical object
action count
action filter_multi_types
action find
entity intracellular part
relation part of
type part
type physical object
[{'concept': 'cellular component'}, 'part of', [{'concept': 'part'}, {'concept': 'physical object'}]]
SELECT DISTINCT ?a WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?q ) WHERE { resource:intracellular_part property:part_of ?w . { { ?w rdf:type ontology:part } UNION { ?w rdf:type ontology:physical_object } } } } . FILTER ( ?i > ?q ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?i ) ?a WHERE { { ?o rdf:type ontology:part . ?a rdf:type ontology:cellular_component . ?a property:part_of ?o } UNION { ?a property:part_of ?o . ?a rdf:type ontology:cellular_component . ?o rdf:type ontology:physical_object } } GROUP BY ?a } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type
Q22328884
P361
Q5058355 Q5058355
USER
Which cellular components are more number of cellular components a component of than organellar ribosome ?
(c(Q5058355),P361,c(Q5058355))
action greater
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_type
action find
entity Q22328884
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?a ) AS ?x ) WHERE { ?a property:P361 ?b . ?b rdf:type ontology:Q5058355 . ?a rdf:type ontology:Q5058355 } GROUP BY ?b } . FILTER ( ?x > ?r ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { resource:Q22328884 property:P361 ?o . ?o rdf:type ontology:Q5058355 } } }
organellar ribosome
action greater
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_type
action find
entity organellar ribosome
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?a ) AS ?x ) WHERE { ?a property:part_of ?b . ?b rdf:type ontology:cellular_component . ?a rdf:type ontology:cellular_component } GROUP BY ?b } . FILTER ( ?x > ?r ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { resource:organellar_ribosome property:part_of ?o . ?o rdf:type ontology:cellular_component } } }
[]
cellular component cellular component
Q29548 Q15320191 Q14876131
SYSTEM
plasma membrane, synaptic cleft, compact myelin
Q22329450 Q21106124 Q15320191 Q14864171 Q14876131 Q14878067 Q22327994 Q22327622 Q22327479 Q22327686 Q671136 Q22330431 Q189094 Q24576572 Q3824358 Q22329021 Q14864391 Q14864390 Q22328085 Q14329032 Q14905221 Q21199358 Q22327411 Q22327418 Q21109092 Q14864382 Q14353100 Q22329851 Q14863372 Q21423046 Q22327652 Q22329848 Q180436 Q22329162 Q22329846 Q22329160 Q24570682 Q22330051 Q22327498 Q14911512 Q22327494 Q14762605 Q21750262 Q22329401 Q24570673 Q14349538 Q22330231 Q2914458 Q22327505 Q22327500 Q21095308 Q79927 Q22327475 Q14864520 Q29548 Q22328105 Q14860546 Q14864866 Q899827 Q193825
(c(Q5058355),P361,c(Q5058355))
action greater
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_type
action find
entity Q22328884
relation P361
type Q5058355
The [ANSWERS] are more number of cellular components a component of than organellar ribosome
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?a ) AS ?x ) WHERE { ?a property:P361 ?b . ?b rdf:type ontology:Q5058355 . ?a rdf:type ontology:Q5058355 } GROUP BY ?b } . FILTER ( ?x > ?r ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { resource:Q22328884 property:P361 ?o . ?o rdf:type ontology:Q5058355 } } }
lateral part of cell viral capsid synaptic cleft cell periphery compact myelin organelle membrane rhoptry side of membrane presynapse prospore membrane synaptic vesicle unencapsulated part of cell cell surface presynaptic endosome membrane intracellular apical complex intracellular organelle synaptic vesicle membrane external encapsulating structure endoplasmic reticulum membrane symbiont-containing vacuole membrane bacterial nucleoid extracellular space of host host nuclear outer membrane-endoplasmic reticulum membrane network presynaptic active zone cell projection virus tail myelin sheath membrane-bounded organelle whole membrane icosahedral viral capsid, collar cilium ventral disc icosahedral viral capsid, neck ventral disc overlap zone spine apparatus membrane dinoflagellate hypocone postsynaptic endocytic zone stereocilium postsynaptic endosome midbody cell division site pellicle postsynaptic endosome membrane apical part of cell dinoflagellate epicone extracellular space presynaptic endosome presynaptic endocytic zone retromer complex endoplasmic reticulum postsynapse extrinsic component of membrane plasma membrane cell septum basal part of cell cell body endomembrane system extracellular matrix
The plasma membrane, synaptic cleft and compact myelin are more number of cellular components a component of than organellar ribosome
plasma membrane synaptic cleft compact myelin
action greater
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_type
action find
entity organellar ribosome
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?a ) AS ?x ) WHERE { ?a property:part_of ?b . ?b rdf:type ontology:cellular_component . ?a rdf:type ontology:cellular_component } GROUP BY ?b } . FILTER ( ?x > ?r ) . { SELECT DISTINCT ( COUNT ( ?o ) AS ?r ) WHERE { resource:organellar_ribosome property:part_of ?o . ?o rdf:type ontology:cellular_component } } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Incomplete
Q21750262
P361
Q5058355 Q5058355
USER
And how about cell division site?
(c(Q5058355),P361,c(Q5058355))
action greater
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_type
action find
entity Q21750262
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?d ) AS ?m ) WHERE { ?d property:P361 ?b . ?b rdf:type ontology:Q5058355 . ?d rdf:type ontology:Q5058355 } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?f ) AS ?z ) WHERE { resource:Q21750262 property:P361 ?f . ?f rdf:type ontology:Q5058355 } } . FILTER ( ?m > ?z ) }
cell division site
action greater
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_type
action find
entity cell division site
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?d ) AS ?m ) WHERE { ?d property:part_of ?b . ?b rdf:type ontology:cellular_component . ?d rdf:type ontology:cellular_component } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?f ) AS ?z ) WHERE { resource:cell_division_site property:part_of ?f . ?f rdf:type ontology:cellular_component } } . FILTER ( ?m > ?z ) }
[]
cellular component cellular component
Q29548 Q15320191 Q14878067
SYSTEM
plasma membrane, synaptic cleft, organelle membrane
Q21106124 Q15320191 Q14864171 Q14878067 Q22327994 Q22327479 Q22327686 Q671136 Q22330431 Q189094 Q24576572 Q22329021 Q14864390 Q14329032 Q14905221 Q21199358 Q22327411 Q21109092 Q14864382 Q14353100 Q22329851 Q14863372 Q22329162 Q24570682 Q14911512 Q24570673 Q14349538 Q2914458 Q21095308 Q22327475 Q29548 Q14860546 Q899827
(c(Q5058355),P361,c(Q5058355))
action greater
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_type
action find
entity Q21750262
relation P361
type Q5058355
[ANSWERS]
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?d ) AS ?m ) WHERE { ?d property:P361 ?b . ?b rdf:type ontology:Q5058355 . ?d rdf:type ontology:Q5058355 } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?f ) AS ?z ) WHERE { resource:Q21750262 property:P361 ?f . ?f rdf:type ontology:Q5058355 } } . FILTER ( ?m > ?z ) }
viral capsid synaptic cleft cell periphery organelle membrane rhoptry presynapse prospore membrane synaptic vesicle unencapsulated part of cell cell surface presynaptic endosome membrane apical complex synaptic vesicle membrane endoplasmic reticulum membrane symbiont-containing vacuole membrane bacterial nucleoid extracellular space of host nuclear outer membrane-endoplasmic reticulum membrane network presynaptic active zone cell projection virus tail myelin sheath ventral disc spine apparatus membrane stereocilium postsynaptic endosome membrane apical part of cell extracellular space retromer complex postsynapse plasma membrane basal part of cell endomembrane system
plasma membrane synaptic cleft organelle membrane
action greater
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_type
action find
entity cell division site
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?d ) AS ?m ) WHERE { ?d property:part_of ?b . ?b rdf:type ontology:cellular_component . ?d rdf:type ontology:cellular_component } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?f ) AS ?z ) WHERE { resource:cell_division_site property:part_of ?f . ?f rdf:type ontology:cellular_component } } . FILTER ( ?m > ?z ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21986367
P682
Q2996394
USER
What is the biological process that Ras-related protein Rab-8B is involved in ?
(Q21986367,P682,c(Q2996394))
action filter_type
action find
entity Q21986367
relation P682
type Q2996394
['Q21986367', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?c WHERE { resource:Q21986367 property:P682 ?c . ?c rdf:type ontology:Q2996394 }
Ras-related protein Rab-8B
action filter_type
action find
entity Ras-related protein Rab-8B
relation biological process
type biological process
['Ras-related protein Rab-8B', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?c WHERE { resource:Ras-related_protein_Rab-8B property:biological_process ?c . ?c rdf:type ontology:biological_process }
[]
biological process
Q14876119
SYSTEM
antigen processing and presentation
Q14876119
(Q21986367,P682,c(Q2996394))
action filter_type
action find
entity Q21986367
relation P682
type Q2996394
The biological process that Ras-related protein Rab-8B is involved in is h [ANSWER]
['Q21986367', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?c WHERE { resource:Q21986367 property:P682 ?c . ?c rdf:type ontology:Q2996394 }
antigen processing and presentation
The biological process that Ras-related protein Rab-8B is involved in is h antigen processing and presentation
antigen processing and presentation
action filter_type
action find
entity Ras-related protein Rab-8B
relation biological process
type biological process
['Ras-related protein Rab-8B', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?c WHERE { resource:Ras-related_protein_Rab-8B property:biological_process ?c . ?c rdf:type ontology:biological_process }
[]