Simple Question (Direct)
Simple Question
Q21985411
P682
Q7189713
USER
Which physiological condition is Glutathione synthetase involved in ?
(Q21985411,P682,c(Q7189713))
action filter_type
action find
entity Q21985411
relation P682
type Q7189713
['Q21985411', 'P682', {'concept': 'Q7189713'}]
SELECT DISTINCT ?v WHERE { resource:Q21985411 property:P682 ?v . ?v rdf:type ontology:Q7189713 }
Glutathione synthetase
action filter_type
action find
entity Glutathione synthetase
relation biological process
type physiological condition
['Glutathione synthetase', 'biological process', {'concept': 'physiological condition'}]
SELECT DISTINCT ?v WHERE { resource:Glutathione_synthetase property:biological_process ?v . ?v rdf:type ontology:physiological_condition }
[]
physiological condition
Q332154
SYSTEM
aging
Q332154
(Q21985411,P682,c(Q7189713))
action filter_type
action find
entity Q21985411
relation P682
type Q7189713
Glutathione synthetase is the [ANSWER]
['Q21985411', 'P682', {'concept': 'Q7189713'}]
SELECT DISTINCT ?v WHERE { resource:Q21985411 property:P682 ?v . ?v rdf:type ontology:Q7189713 }
aging
Glutathione synthetase is the aging
aging
action filter_type
action find
entity Glutathione synthetase
relation biological process
type physiological condition
['Glutathione synthetase', 'biological process', {'concept': 'physiological condition'}]
SELECT DISTINCT ?v WHERE { resource:Glutathione_synthetase property:biological_process ?v . ?v rdf:type ontology:physiological_condition }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21985411
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q332154)
action filter_type
action find_reverse
entity Q21985411
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q332154']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q21985411 . ?t rdf:type ontology:Q863908 }
Glutathione synthetase
action filter_type
action find_reverse
entity Glutathione synthetase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'aging']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:Glutathione_synthetase . ?t rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18250995
SYSTEM
Gss
Q18250995
(c(Q863908),P688,Q332154)
action filter_type
action find_reverse
entity Q21985411
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q332154']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q21985411 . ?t rdf:type ontology:Q863908 }
Gss
Gss encodes that nutrient
Gss
action filter_type
action find_reverse
entity Glutathione synthetase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'aging']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:Glutathione_synthetase . ?t rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18250995
P684
Q863908
USER
Which is the species that has that one as its orthologous gene ?
(c(Q863908),P684,Q18250995)
action filter_type
action find
entity Q18250995
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18250995']
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q863908 . resource:Q18250995 property:P684 ?a }
Gss
action filter_type
action find
entity Gss
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Gss']
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:nucleic_acid_sequence . resource:Gss property:ortholog ?a }
[]
nucleic acid sequence
Q18015278
SYSTEM
GSS
Q18015278
(c(Q863908),P684,Q18250995)
action filter_type
action find
entity Q18250995
relation P684
type Q863908
[ANSWER] is the species that has that one as its orthologous gene
[{'concept': 'Q863908'}, 'P684', 'Q18250995']
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q863908 . resource:Q18250995 property:P684 ?a }
GSS
GSS is the species that has that one as its orthologous gene
GSS
action filter_type
action find
entity Gss
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Gss']
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:nucleic_acid_sequence . resource:Gss property:ortholog ?a }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q18250995 Q23358946
P688
Q181394
USER
How many nutrients are encoded by Gss or hypothetical protein    BT_4734 ?
(Q18250995,P688,c(Q181394)) (Q23358946,P688,c(Q181394))
action count
action union
action filter_type
action find
entity Q18250995
relation P688
type Q181394
action filter_type
action find
entity Q23358946
relation P688
type Q181394
['Q18250995', 'P688', {'concept': 'Q181394'}] ['Q23358946', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?n ) WHERE { VALUES ( ?q ) { ( resource:Q18250995 ) ( resource:Q23358946 ) } . ?q property:P688 ?f }
Gss hypothetical protein    BT_4734
action count
action union
action filter_type
action find
entity Gss
relation encodes
type nutrient
action filter_type
action find
entity hypothetical protein    BT_4734
relation encodes
type nutrient
['Gss', 'encodes', {'concept': 'nutrient'}] ['hypothetical protein    BT_4734', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?n ) WHERE { VALUES ( ?q ) { ( resource:Gss ) ( resource:hypothetical_protein____BT_4734 ) } . ?q property:encodes ?f }
[]
nutrient
SYSTEM
2
Q23458266 Q21985411
(Q18250995,P688,c(Q181394)) (Q23358946,P688,c(Q181394))
action count
action union
action filter_type
action find
entity Q18250995
relation P688
type Q181394
action filter_type
action find
entity Q23358946
relation P688
type Q181394
[ANSWER]
['Q18250995', 'P688', {'concept': 'Q181394'}] ['Q23358946', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?n ) WHERE { VALUES ( ?q ) { ( resource:Q18250995 ) ( resource:Q23358946 ) } . ?q property:P688 ?f }
hypothetical protein    BT_4734 Glutathione synthetase
2
action count
action union
action filter_type
action find
entity Gss
relation encodes
type nutrient
action filter_type
action find
entity hypothetical protein    BT_4734
relation encodes
type nutrient
['Gss', 'encodes', {'concept': 'nutrient'}] ['hypothetical protein    BT_4734', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?n ) WHERE { VALUES ( ?q ) { ( resource:Gss ) ( resource:hypothetical_protein____BT_4734 ) } . ?q property:encodes ?f }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q22322268 Q18250995
P702
Q181394
USER
Which nutrients do Gss or hypothetical protein    HMPREF0421_20215 encode ?
OR((c(Q181394),P702,Q18250995), (c(Q181394),P702,Q22322268))
action filter_type
action union
action find_reverse
entity Q18250995
relation P702
action find_reverse
entity Q22322268
relation P702
type Q181394
{'OR': [[{'concept': 'Q181394'}, 'P702', 'Q18250995'], [{'concept': 'Q181394'}, 'P702', 'Q22322268']]}
SELECT DISTINCT ?g WHERE { { VALUES ( ?d ) { ( resource:Q18250995 ) ( resource:Q22322268 ) } . ?g property:P702 ?d } . ?g rdf:type ontology:Q181394 }
hypothetical protein    HMPREF0421_20215 Gss
action filter_type
action union
action find_reverse
entity Gss
relation encoded by
action find_reverse
entity hypothetical protein    HMPREF0421_20215
relation encoded by
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'encoded by', 'Gss'], [{'concept': 'nutrient'}, 'encoded by', 'hypothetical protein    HMPREF0421_20215']]}
SELECT DISTINCT ?g WHERE { { VALUES ( ?d ) { ( resource:Gss ) ( resource:hypothetical_protein____HMPREF0421_20215 ) } . ?g property:encoded_by ?d } . ?g rdf:type ontology:nutrient }
[]
nutrient
Q21985411 Q22325681
SYSTEM
Glutathione synthetase, hypothetical protein    HMPREF0421_20215
Q21985411 Q22325681
OR((c(Q181394),P702,Q18250995), (c(Q181394),P702,Q22322268))
action filter_type
action union
action find_reverse
entity Q18250995
relation P702
action find_reverse
entity Q22322268
relation P702
type Q181394
[ANSWERS]
{'OR': [[{'concept': 'Q181394'}, 'P702', 'Q18250995'], [{'concept': 'Q181394'}, 'P702', 'Q22322268']]}
SELECT DISTINCT ?g WHERE { { VALUES ( ?d ) { ( resource:Q18250995 ) ( resource:Q22322268 ) } . ?g property:P702 ?d } . ?g rdf:type ontology:Q181394 }
Glutathione synthetase hypothetical protein    HMPREF0421_20215
Gss or hypothetical protein HMPREF0421_20215 encode d Glutathione synthetase and hypothetical protein HMPREF0421 20215
Glutathione synthetase hypothetical protein    HMPREF0421_20215
action filter_type
action union
action find_reverse
entity Gss
relation encoded by
action find_reverse
entity hypothetical protein    HMPREF0421_20215
relation encoded by
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'encoded by', 'Gss'], [{'concept': 'nutrient'}, 'encoded by', 'hypothetical protein    HMPREF0421_20215']]}
SELECT DISTINCT ?g WHERE { { VALUES ( ?d ) { ( resource:Gss ) ( resource:hypothetical_protein____HMPREF0421_20215 ) } . ?g property:encoded_by ?d } . ?g rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q8386
USER
Which nutrients do around 25 nutrients or drugs contact with ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 25
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?n WHERE { FILTER ( ?s = 25 ) . { SELECT DISTINCT ( COUNT ( ?j ) AS ?s ) ?n WHERE { ?j rdf:type ?w . VALUES ( ?w ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } GROUP BY ?n } }
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 25
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?n WHERE { FILTER ( ?s = 25 ) . { SELECT DISTINCT ( COUNT ( ?j ) AS ?s ) ?n WHERE { ?j rdf:type ?w . VALUES ( ?w ) { ( ontology:nutrient ) ( ontology:drug ) } } GROUP BY ?n } }
[]
nutrient nutrient drug
Q4639596 Q415364 Q5123372
SYSTEM
5-hydroxytryptamine receptor 2B, Prostaglandin G/H synthase 2, Mu-type opioid receptor
Q7050954 Q287961 Q5123372 Q410142 Q288797 Q287958 Q4639596 Q4734884 Q4734887 Q21115051 Q415364 Q21109355 Q4734894 Q21110872 Q4734892 Q4734891 Q21115046 Q21109363
(c(Q181394)|c(Q8386),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 25
[ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?n WHERE { FILTER ( ?s = 25 ) . { SELECT DISTINCT ( COUNT ( ?j ) AS ?s ) ?n WHERE { ?j rdf:type ?w . VALUES ( ?w ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } } GROUP BY ?n } }
Sodium-dependent noradrenaline transporter Beta-2 adrenergic receptor Mu-type opioid receptor Sodium-dependent serotonin transporter 5-hydroxytryptamine receptor 1B Beta-1 adrenergic receptor 5-hydroxytryptamine receptor 2B Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor 5-hydroxytryptamine receptor 1E Prostaglandin G/H synthase 2 5-hydroxytryptamine receptor 7 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Alpha-2C adrenergic receptor 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 6
Which nutrients around 25 nutrients or drugs contact with
5-hydroxytryptamine receptor 2B Prostaglandin G/H synthase 2 Mu-type opioid receptor
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 25
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?n WHERE { FILTER ( ?s = 25 ) . { SELECT DISTINCT ( COUNT ( ?j ) AS ?s ) ?n WHERE { ?j rdf:type ?w . VALUES ( ?w ) { ( ontology:nutrient ) ( ontology:drug ) } } GROUP BY ?n } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q4639596
P129
Q8386
USER
How many drugs do 5-hydroxytryptamine receptor 2B communicate with ?
(Q4639596,P129,c(Q8386))
action count
action filter_type
action find
entity Q4639596
relation P129
type Q8386
['Q4639596', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?b ) WHERE { resource:Q4639596 property:P129 ?t . ?t rdf:type ontology:Q8386 }
5-hydroxytryptamine receptor 2B
action count
action filter_type
action find
entity 5-hydroxytryptamine receptor 2B
relation physically interacts with
type drug
['5-hydroxytryptamine receptor 2B', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?b ) WHERE { resource:5-hydroxytryptamine_receptor_2B property:physically_interacts_with ?t . ?t rdf:type ontology:drug }
[]
drug
SYSTEM
22
Q424446 Q423308 Q269111 Q6824154 Q422244 Q424442 Q416701 Q395229 Q180912 Q44931 Q7702355 Q413581 Q424477 Q419186 Q23118 Q251347 Q411457 Q221361 Q418101 Q415752 Q412226 Q340139
(Q4639596,P129,c(Q8386))
action count
action filter_type
action find
entity Q4639596
relation P129
type Q8386
[ANSWER]
['Q4639596', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?b ) WHERE { resource:Q4639596 property:P129 ?t . ?t rdf:type ontology:Q8386 }
lisuride cabergoline apomorphine methiothepin fluoxetine methysergide mianserin agomelatine melatonin sarpogrelate terguride bromocriptine methylergonovine ergotamine LSD haloperidol trazodone clozapine pindolol pergolide yohimbine lorcaserin
22
action count
action filter_type
action find
entity 5-hydroxytryptamine receptor 2B
relation physically interacts with
type drug
['5-hydroxytryptamine receptor 2B', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?b ) WHERE { resource:5-hydroxytryptamine_receptor_2B property:physically_interacts_with ?t . ?t rdf:type ontology:drug }
[]