Simple Question (Direct)
Simple Question
Q21991508
P681
Q5058355
USER
What is a component of Trace amine-associated receptor 7d ?
(Q21991508,P681,c(Q5058355))
action filter_type
action find
entity Q21991508
relation P681
type Q5058355
['Q21991508', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?q WHERE { resource:Q21991508 property:P681 ?q . ?q rdf:type ontology:Q5058355 }
Trace amine-associated receptor 7d
action filter_type
action find
entity Trace amine-associated receptor 7d
relation cell component
type cellular component
['Trace amine-associated receptor 7d', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?q WHERE { resource:Trace_amine-associated_receptor_7d property:cell_component ?q . ?q rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q21991508,P681,c(Q5058355))
action filter_type
action find
entity Q21991508
relation P681
type Q5058355
A component of Trace amine-associated receptor 7d is the [ANSWER]
['Q21991508', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?q WHERE { resource:Q21991508 property:P681 ?q . ?q rdf:type ontology:Q5058355 }
plasma membrane
A component of Trace amine-associated receptor 7d is the plasma membrane
plasma membrane
action filter_type
action find
entity Trace amine-associated receptor 7d
relation cell component
type cellular component
['Trace amine-associated receptor 7d', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?q WHERE { resource:Trace_amine-associated_receptor_7d property:cell_component ?q . ?q rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21991508
P688
Q863908
USER
Which nucleic acid sequence encodes Trace amine-associated receptor 7d ?
(c(Q863908),P688,Q21991508)
action filter_type
action find_reverse
entity Q21991508
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21991508']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q21991508 . ?p rdf:type ontology:Q863908 }
Trace amine-associated receptor 7d
action filter_type
action find_reverse
entity Trace amine-associated receptor 7d
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Trace amine-associated receptor 7d']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:Trace_amine-associated_receptor_7d . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18305209
SYSTEM
Taar7d
Q18305209
(c(Q863908),P688,Q21991508)
action filter_type
action find_reverse
entity Q21991508
relation P688
type Q863908
[ANSWER] encodes Trace amine-associated receptor 7d
[{'concept': 'Q863908'}, 'P688', 'Q21991508']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q21991508 . ?p rdf:type ontology:Q863908 }
Taar7d
Taar7d encodes Trace amine-associated receptor 7d
Taar7d
action filter_type
action find_reverse
entity Trace amine-associated receptor 7d
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Trace amine-associated receptor 7d']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:Trace_amine-associated_receptor_7d . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21991508
P702
Q863908
USER
Which gene encodes that nutrient ?
(Q18305209,P702,c(Q863908))
action filter_type
action find
entity Q21991508
relation P702
type Q863908
['Q18305209', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?q WHERE { resource:Q21991508 property:P702 ?q . ?q rdf:type ontology:Q863908 }
Trace amine-associated receptor 7d
action filter_type
action find
entity Trace amine-associated receptor 7d
relation encoded by
type nucleic acid sequence
['Taar7d', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?q WHERE { resource:Trace_amine-associated_receptor_7d property:encoded_by ?q . ?q rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18305209
SYSTEM
Taar7d
Q18305209
(Q18305209,P702,c(Q863908))
action filter_type
action find
entity Q21991508
relation P702
type Q863908
[ANSWER] encodes that nutrient
['Q18305209', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?q WHERE { resource:Q21991508 property:P702 ?q . ?q rdf:type ontology:Q863908 }
Taar7d
Taar7d encodes that nutrient
Taar7d
action filter_type
action find
entity Trace amine-associated receptor 7d
relation encoded by
type nucleic acid sequence
['Taar7d', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?q WHERE { resource:Trace_amine-associated_receptor_7d property:encoded_by ?q . ?q rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|3 entities, 2 direct, 2(direct) are query entities, subject is indirect
Q18305209 Q23557283 Q21991508
P688
Q181394
USER
Does that nucleic acid sequence encodes hypothetical protein    BPSS1844 and Trace amine-associated receptor 7d ?
(Q18305209,P688,Q23557283) (Q18305209,P688,Q21991508)
action is_in
entity Q18305209
action intersection
action find_reverse
entity Q23557283
relation P688
action find_reverse
entity Q21991508
relation P688
['Q18305209', 'P688', 'Q23557283'] ['Q18305209', 'P688', 'Q21991508']
ASK WHERE { resource:Q18305209 property:P688 resource:Q23557283 . resource:Q18305209 property:P688 resource:Q21991508 }
Taar7d hypothetical protein    BPSS1844 Trace amine-associated receptor 7d
action is_in
entity Taar7d
action intersection
action find_reverse
entity hypothetical protein    BPSS1844
relation encodes
action find_reverse
entity Trace amine-associated receptor 7d
relation encodes
['Taar7d', 'encodes', 'hypothetical protein    BPSS1844'] ['Taar7d', 'encodes', 'Trace amine-associated receptor 7d']
ASK WHERE { resource:Taar7d property:encodes resource:hypothetical_protein____BPSS1844 . resource:Taar7d property:encodes resource:Trace_amine-associated_receptor_7d }
[]
nutrient
SYSTEM
NO and YES respectively
(Q18305209,P688,Q23557283) (Q18305209,P688,Q21991508)
action is_in
entity Q18305209
action intersection
action find_reverse
entity Q23557283
relation P688
action find_reverse
entity Q21991508
relation P688
[ANSWER]
['Q18305209', 'P688', 'Q23557283'] ['Q18305209', 'P688', 'Q21991508']
ASK WHERE { resource:Q18305209 property:P688 resource:Q23557283 . resource:Q18305209 property:P688 resource:Q21991508 }
NO and YES respectively
action is_in
entity Taar7d
action intersection
action find_reverse
entity hypothetical protein    BPSS1844
relation encodes
action find_reverse
entity Trace amine-associated receptor 7d
relation encodes
['Taar7d', 'encodes', 'hypothetical protein    BPSS1844'] ['Taar7d', 'encodes', 'Trace amine-associated receptor 7d']
ASK WHERE { resource:Taar7d property:encodes resource:hypothetical_protein____BPSS1844 . resource:Taar7d property:encodes resource:Trace_amine-associated_receptor_7d }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18305209
P703
Q16521
USER
Where is that nucleic acid sequence found ?
action filter_type
action find
entity Q18305209
relation P703
type Q16521
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q16521 . resource:Q18305209 property:P703 ?x }
Taar7d
action filter_type
action find
entity Taar7d
relation found in taxon
type taxon
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:taxon . resource:Taar7d property:found_in_taxon ?x }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
action filter_type
action find
entity Q18305209
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q16521 . resource:Q18305209 property:P703 ?x }
Mus musculus
That nucleic acid sequence is found in Mus musculus
Mus musculus
action filter_type
action find
entity Taar7d
relation found in taxon
type taxon
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:taxon . resource:Taar7d property:found_in_taxon ?x }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q83310 Q23258976
P703
Q863908
USER
Is exonuclease V subunit gamma    Mb0648c found in the taxon that one ?
(Q23258976,P703,Q83310)
action is_in
entity Q23258976
action find
entity Q83310
relation P703
['Q23258976', 'P703', 'Q83310']
ASK WHERE { resource:Q83310 property:P703 resource:Q23258976 }
Mus musculus exonuclease V subunit gamma    Mb0648c
action is_in
entity exonuclease V subunit gamma    Mb0648c
action find
entity Mus musculus
relation found in taxon
['exonuclease V subunit gamma    Mb0648c', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Mus_musculus property:found_in_taxon resource:exonuclease_V_subunit_gamma____Mb0648c }
[]
nucleic acid sequence
SYSTEM
NO
(Q23258976,P703,Q83310)
action is_in
entity Q23258976
action find
entity Q83310
relation P703
[ANSWER]
['Q23258976', 'P703', 'Q83310']
ASK WHERE { resource:Q83310 property:P703 resource:Q23258976 }
No
action is_in
entity exonuclease V subunit gamma    Mb0648c
action find
entity Mus musculus
relation found in taxon
['exonuclease V subunit gamma    Mb0648c', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Mus_musculus property:found_in_taxon resource:exonuclease_V_subunit_gamma____Mb0648c }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q23242950 Q23557283
P703
Q631147
USER
Which infraspecific names are hypothetical protein    BPSS1844 and hypothetical protein    BPSS0380A a part of ?
AND((Q23557283,P703,c(Q631147)), (Q23242950,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23557283
relation P703
action find
entity Q23242950
relation P703
type Q631147
{'AND': [['Q23557283', 'P703', {'concept': 'Q631147'}], ['Q23242950', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?a WHERE { resource:Q23242950 property:P703 ?a . resource:Q23557283 property:P703 ?a . ?a rdf:type ontology:Q631147 }
hypothetical protein    BPSS0380A hypothetical protein    BPSS1844
action filter_type
action intersection
action find
entity hypothetical protein    BPSS1844
relation found in taxon
action find
entity hypothetical protein    BPSS0380A
relation found in taxon
type infraspecific name
{'AND': [['hypothetical protein    BPSS1844', 'found in taxon', {'concept': 'infraspecific name'}], ['hypothetical protein    BPSS0380A', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?a WHERE { resource:hypothetical_protein____BPSS0380A property:found_in_taxon ?a . resource:hypothetical_protein____BPSS1844 property:found_in_taxon ?a . ?a rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102995
SYSTEM
Burkholderia pseudomallei K96243
Q21102995
AND((Q23557283,P703,c(Q631147)), (Q23242950,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23557283
relation P703
action find
entity Q23242950
relation P703
type Q631147
[ANSWER] is hypothetical protein BPSS1844 and hypothetical protein BPSS0380A a part of
{'AND': [['Q23557283', 'P703', {'concept': 'Q631147'}], ['Q23242950', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?a WHERE { resource:Q23242950 property:P703 ?a . resource:Q23557283 property:P703 ?a . ?a rdf:type ontology:Q631147 }
Burkholderia pseudomallei K96243
Burkholderia pseudomallei K96243 is hypothetical protein BPSS1844 and hypothetical protein BPSS0380A a part of
Burkholderia pseudomallei K96243
action filter_type
action intersection
action find
entity hypothetical protein    BPSS1844
relation found in taxon
action find
entity hypothetical protein    BPSS0380A
relation found in taxon
type infraspecific name
{'AND': [['hypothetical protein    BPSS1844', 'found in taxon', {'concept': 'infraspecific name'}], ['hypothetical protein    BPSS0380A', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?a WHERE { resource:hypothetical_protein____BPSS0380A property:found_in_taxon ?a . resource:hypothetical_protein____BPSS1844 property:found_in_taxon ?a . ?a rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q24086837 Q18305209
P688
Q181394
USER
Which nutrients are Taar7d or ArsR family transcriptional regulator    CT1654 an encoding of ?
OR((Q18305209,P688,c(Q181394)), (Q24086837,P688,c(Q181394)))
action filter_type
action union
action find
entity Q18305209
relation P688
action find
entity Q24086837
relation P688
type Q181394
{'OR': [['Q18305209', 'P688', {'concept': 'Q181394'}], ['Q24086837', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:Q181394 . { { resource:Q18305209 property:P688 ?v } UNION { resource:Q24086837 property:P688 ?v } } }
ArsR family transcriptional regulator    CT1654 Taar7d
action filter_type
action union
action find
entity Taar7d
relation encodes
action find
entity ArsR family transcriptional regulator    CT1654
relation encodes
type nutrient
{'OR': [['Taar7d', 'encodes', {'concept': 'nutrient'}], ['ArsR family transcriptional regulator    CT1654', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:nutrient . { { resource:Taar7d property:encodes ?v } UNION { resource:ArsR_family_transcriptional_regulator____CT1654 property:encodes ?v } } }
[]
nutrient
Q21991508 Q23471022
SYSTEM
Trace amine-associated receptor 7d, ArsR family transcriptional regulator    CT1654
Q21991508 Q23471022
OR((Q18305209,P688,c(Q181394)), (Q24086837,P688,c(Q181394)))
action filter_type
action union
action find
entity Q18305209
relation P688
action find
entity Q24086837
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q18305209', 'P688', {'concept': 'Q181394'}], ['Q24086837', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:Q181394 . { { resource:Q18305209 property:P688 ?v } UNION { resource:Q24086837 property:P688 ?v } } }
Trace amine-associated receptor 7d ArsR family transcriptional regulator    CT1654
Trace amine-associated receptor 7d and ArsR family transcriptional regulator CT1654 are Taar7d or ArsR family transcriptional regulator CT1654 an encoding of
Trace amine-associated receptor 7d ArsR family transcriptional regulator    CT1654
action filter_type
action union
action find
entity Taar7d
relation encodes
action find
entity ArsR family transcriptional regulator    CT1654
relation encodes
type nutrient
{'OR': [['Taar7d', 'encodes', {'concept': 'nutrient'}], ['ArsR family transcriptional regulator    CT1654', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:nutrient . { { resource:Taar7d property:encodes ?v } UNION { resource:ArsR_family_transcriptional_regulator____CT1654 property:encodes ?v } } }
[]