Simple Question (Direct)
Simple Question
Q21203993
P682
Q2996394
USER
Which biological process is Ig heavy chain V-III region TRO involved in ?
(Q21203993,P682,c(Q2996394))
action filter_type
action find
entity Q21203993
relation P682
type Q2996394
['Q21203993', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q2996394 . resource:Q21203993 property:P682 ?x }
Ig heavy chain V-III region TRO
action filter_type
action find
entity Ig heavy chain V-III region TRO
relation biological process
type biological process
['Ig heavy chain V-III region TRO', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:biological_process . resource:Ig_heavy_chain_V-III_region_TRO property:biological_process ?x }
[]
biological process
Q1612119
SYSTEM
immune response
Q1612119
(Q21203993,P682,c(Q2996394))
action filter_type
action find
entity Q21203993
relation P682
type Q2996394
The [ANSWER] is Ig heavy chain V-III region TRO involved in
['Q21203993', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q2996394 . resource:Q21203993 property:P682 ?x }
immune response
The immune response is Ig heavy chain V-III region TRO involved in
immune response
action filter_type
action find
entity Ig heavy chain V-III region TRO
relation biological process
type biological process
['Ig heavy chain V-III region TRO', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:biological_process . resource:Ig_heavy_chain_V-III_region_TRO property:biological_process ?x }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21203993
P681
Q15989253
USER
Which is the part that is a component of Ig heavy chain V-III region TRO ?
(Q21203993,P681,c(Q15989253))
action filter_type
action find
entity Q21203993
relation P681
type Q15989253
['Q21203993', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q21203993 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
Ig heavy chain V-III region TRO
action filter_type
action find
entity Ig heavy chain V-III region TRO
relation cell component
type part
['Ig heavy chain V-III region TRO', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:Ig_heavy_chain_V-III_region_TRO property:cell_component ?s . ?s rdf:type ontology:part }
[]
part
Q14645596
SYSTEM
extracellular region
Q14645596
(Q21203993,P681,c(Q15989253))
action filter_type
action find
entity Q21203993
relation P681
type Q15989253
The [ANSWER] is the part that is a component of Ig heavy chain V-III region TRO
['Q21203993', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q21203993 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
extracellular region
The extracellular region is the part that is a component of Ig heavy chain V-III region TRO
extracellular region
action filter_type
action find
entity Ig heavy chain V-III region TRO
relation cell component
type part
['Ig heavy chain V-III region TRO', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:Ig_heavy_chain_V-III_region_TRO property:cell_component ?s . ?s rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21110010
Q15989253
USER
And also tell me about Cytoplasmic dynein 1 intermediate chain 1?
(Q21110010,P681,c(Q15989253))
action filter_type
action find
entity Q21110010
relation P681
type Q15989253
['Q21110010', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?g WHERE { resource:Q21110010 property:P681 ?g . ?g rdf:type ontology:Q15989253 }
Cytoplasmic dynein 1 intermediate chain 1
action filter_type
action find
entity Cytoplasmic dynein 1 intermediate chain 1
relation cell component
type part
['Cytoplasmic dynein 1 intermediate chain 1', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?g WHERE { resource:Cytoplasmic_dynein_1_intermediate_chain_1 property:cell_component ?g . ?g rdf:type ontology:part }
[]
part
Q908912 Q189206 Q40260
SYSTEM
kinetochore, vesicle, nucleus
Q908912 Q189206 Q40260 Q79899
(Q21110010,P681,c(Q15989253))
action filter_type
action find
entity Q21110010
relation P681
type Q15989253
[ANSWERS]
['Q21110010', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?g WHERE { resource:Q21110010 property:P681 ?g . ?g rdf:type ontology:Q15989253 }
kinetochore vesicle nucleus cytoplasm
kinetochore vesicle nucleus
action filter_type
action find
entity Cytoplasmic dynein 1 intermediate chain 1
relation cell component
type part
['Cytoplasmic dynein 1 intermediate chain 1', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?g WHERE { resource:Cytoplasmic_dynein_1_intermediate_chain_1 property:cell_component ?g . ?g rdf:type ontology:part }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q23533895
P681
Q181394
USER
Do 50S ribosomal protein L4    CD630_00740 have those parts as cell component ?
(Q23533895,P681,Q908912) (Q23533895,P681,Q189206) (Q23533895,P681,Q40260)
action is_in
entity prev_answer
action find
entity Q23533895
relation P681
['Q23533895', 'P681', 'Q908912'] ['Q23533895', 'P681', 'Q189206'] ['Q23533895', 'P681', 'Q40260']
ASK WHERE { VALUES ( ?l ) { ( resource:Q908912 ) ( resource:Q189206 ) ( resource:Q40260 ) } . resource:Q23533895 property:P681 ?l }
50S ribosomal protein L4    CD630_00740
action is_in
entity prev_answer
action find
entity 50S ribosomal protein L4    CD630_00740
relation cell component
['50S ribosomal protein L4    CD630_00740', 'cell component', 'kinetochore'] ['50S ribosomal protein L4    CD630_00740', 'cell component', 'vesicle'] ['50S ribosomal protein L4    CD630_00740', 'cell component', 'nucleus']
ASK WHERE { VALUES ( ?l ) { ( resource:kinetochore ) ( resource:vesicle ) ( resource:nucleus ) } . resource:50S_ribosomal_protein_L4____CD630_00740 property:cell_component ?l }
[]
nutrient
SYSTEM
NO
(Q23533895,P681,Q908912) (Q23533895,P681,Q189206) (Q23533895,P681,Q40260)
action is_in
entity prev_answer
action find
entity Q23533895
relation P681
[ANSWER]
['Q23533895', 'P681', 'Q908912'] ['Q23533895', 'P681', 'Q189206'] ['Q23533895', 'P681', 'Q40260']
ASK WHERE { VALUES ( ?l ) { ( resource:Q908912 ) ( resource:Q189206 ) ( resource:Q40260 ) } . resource:Q23533895 property:P681 ?l }
No
action is_in
entity prev_answer
action find
entity 50S ribosomal protein L4    CD630_00740
relation cell component
['50S ribosomal protein L4    CD630_00740', 'cell component', 'kinetochore'] ['50S ribosomal protein L4    CD630_00740', 'cell component', 'vesicle'] ['50S ribosomal protein L4    CD630_00740', 'cell component', 'nucleus']
ASK WHERE { VALUES ( ?l ) { ( resource:kinetochore ) ( resource:vesicle ) ( resource:nucleus ) } . resource:50S_ribosomal_protein_L4____CD630_00740 property:cell_component ?l }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q21203993 Q21750262
P681
Q5058355
USER
Is cell division site a component of Ig heavy chain V-III region TRO ?
(Q21203993,P681,Q21750262)
action is_in
entity Q21750262
action find
entity Q21203993
relation P681
['Q21203993', 'P681', 'Q21750262']
ASK WHERE { resource:Q21203993 property:P681 resource:Q21750262 }
Ig heavy chain V-III region TRO cell division site
action is_in
entity cell division site
action find
entity Ig heavy chain V-III region TRO
relation cell component
['Ig heavy chain V-III region TRO', 'cell component', 'cell division site']
ASK WHERE { resource:Ig_heavy_chain_V-III_region_TRO property:cell_component resource:cell_division_site }
[]
cellular component
SYSTEM
NO
(Q21203993,P681,Q21750262)
action is_in
entity Q21750262
action find
entity Q21203993
relation P681
[ANSWER]
['Q21203993', 'P681', 'Q21750262']
ASK WHERE { resource:Q21203993 property:P681 resource:Q21750262 }
No
action is_in
entity cell division site
action find
entity Ig heavy chain V-III region TRO
relation cell component
['Ig heavy chain V-III region TRO', 'cell component', 'cell division site']
ASK WHERE { resource:Ig_heavy_chain_V-III_region_TRO property:cell_component resource:cell_division_site }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q21110010
P702
Q863908
USER
How many nucleic acid sequences encodes Cytoplasmic dynein 1 intermediate chain 1 ?
(Q21110010,P702,c(Q863908))
action count
action filter_type
action find
entity Q21110010
relation P702
type Q863908
['Q21110010', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?h ) WHERE { resource:Q21110010 property:P702 ?e . ?e rdf:type ontology:Q863908 }
Cytoplasmic dynein 1 intermediate chain 1
action count
action filter_type
action find
entity Cytoplasmic dynein 1 intermediate chain 1
relation encoded by
type nucleic acid sequence
['Cytoplasmic dynein 1 intermediate chain 1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?h ) WHERE { resource:Cytoplasmic_dynein_1_intermediate_chain_1 property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q248215
(Q21110010,P702,c(Q863908))
action count
action filter_type
action find
entity Q21110010
relation P702
type Q863908
[ANSWER]
['Q21110010', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?h ) WHERE { resource:Q21110010 property:P702 ?e . ?e rdf:type ontology:Q863908 }
DYNC1I1
1
action count
action filter_type
action find
entity Cytoplasmic dynein 1 intermediate chain 1
relation encoded by
type nucleic acid sequence
['Cytoplasmic dynein 1 intermediate chain 1', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?h ) WHERE { resource:Cytoplasmic_dynein_1_intermediate_chain_1 property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24133362
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by type VI secretion protein EvpB    ECL_01802 ?
(c(Q863908),P688,Q24133362)
action filter_type
action find_reverse
entity Q24133362
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24133362']
SELECT DISTINCT ?l WHERE { ?l property:P688 resource:Q24133362 . ?l rdf:type ontology:Q863908 }
type VI secretion protein EvpB    ECL_01802
action filter_type
action find_reverse
entity type VI secretion protein EvpB    ECL_01802
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'type VI secretion protein EvpB    ECL_01802']
SELECT DISTINCT ?l WHERE { ?l property:encodes resource:type_VI_secretion_protein_EvpB____ECL_01802 . ?l rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23081323
SYSTEM
type VI secretion protein EvpB    ECL_01802
Q23081323
(c(Q863908),P688,Q24133362)
action filter_type
action find_reverse
entity Q24133362
relation P688
type Q863908
The nucleic acid sequence that is encoded by type is type VI secretion protein EvpB ECL 01802
[{'concept': 'Q863908'}, 'P688', 'Q24133362']
SELECT DISTINCT ?l WHERE { ?l property:P688 resource:Q24133362 . ?l rdf:type ontology:Q863908 }
type VI secretion protein EvpB    ECL_01802
The nucleic acid sequence that is encoded by type is type VI secretion protein EvpB ECL 01802
type VI secretion protein EvpB    ECL_01802
action filter_type
action find_reverse
entity type VI secretion protein EvpB    ECL_01802
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'type VI secretion protein EvpB    ECL_01802']
SELECT DISTINCT ?l WHERE { ?l property:encodes resource:type_VI_secretion_protein_EvpB____ECL_01802 . ?l rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21203993
P703
Q16521
USER
Where is Ig heavy chain V-III region TRO found ?
(Q21203993,P703,c(Q16521))
action filter_type
action find
entity Q21203993
relation P703
type Q16521
['Q21203993', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?m WHERE { resource:Q21203993 property:P703 ?m . ?m rdf:type ontology:Q16521 }
Ig heavy chain V-III region TRO
action filter_type
action find
entity Ig heavy chain V-III region TRO
relation found in taxon
type taxon
['Ig heavy chain V-III region TRO', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?m WHERE { resource:Ig_heavy_chain_V-III_region_TRO property:found_in_taxon ?m . ?m rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21203993,P703,c(Q16521))
action filter_type
action find
entity Q21203993
relation P703
type Q16521
Ig heavy chain V-III region TRO is found in [ANSWER]
['Q21203993', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?m WHERE { resource:Q21203993 property:P703 ?m . ?m rdf:type ontology:Q16521 }
Homo sapiens
Ig heavy chain V-III region TRO is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Ig heavy chain V-III region TRO
relation found in taxon
type taxon
['Ig heavy chain V-III region TRO', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?m WHERE { resource:Ig_heavy_chain_V-III_region_TRO property:found_in_taxon ?m . ?m rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q15978631 Q18043023
P703
Q863908
USER
Is RAB22A found in that taxon ?
(Q18043023,P703,Q15978631)
action is_in
entity Q15978631
action find
entity Q18043023
relation P703
['Q18043023', 'P703', 'Q15978631']
ASK WHERE { resource:Q18043023 property:P703 resource:Q15978631 }
Homo sapiens RAB22A
action is_in
entity Homo sapiens
action find
entity RAB22A
relation found in taxon
['RAB22A', 'found in taxon', 'Homo sapiens']
ASK WHERE { resource:RAB22A property:found_in_taxon resource:Homo_sapiens }
[]
nucleic acid sequence
SYSTEM
YES
(Q18043023,P703,Q15978631)
action is_in
entity Q15978631
action find
entity Q18043023
relation P703
[ANSWER]
['Q18043023', 'P703', 'Q15978631']
ASK WHERE { resource:Q18043023 property:P703 resource:Q15978631 }
Yes
action is_in
entity Homo sapiens
action find
entity RAB22A
relation found in taxon
['RAB22A', 'found in taxon', 'Homo sapiens']
ASK WHERE { resource:RAB22A property:found_in_taxon resource:Homo_sapiens }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Logical operators
Q15978631
P703
Q502895 Q15619164
USER
How many people or abstract beings are found in the taxon Homo sapiens ?
(c(Q502895),P703,Q15978631) (c(Q15619164),P703,Q15978631)
action count
action union
action filter_type
action find_reverse
entity Q15978631
relation P703
type Q502895
action filter_type
action find_reverse
entity Q15978631
relation P703
type Q15619164
[{'concept': 'Q502895'}, 'P703', 'Q15978631'] [{'concept': 'Q15619164'}, 'P703', 'Q15978631']
SELECT DISTINCT ( COUNT ( ?b ) AS ?h ) WHERE { VALUES ( ?s ) { ( ontology:Q502895 ) ( ontology:Q15619164 ) } . ?b rdf:type ?s }
Homo sapiens
action count
action union
action filter_type
action find_reverse
entity Homo sapiens
relation found in taxon
type common name
action filter_type
action find_reverse
entity Homo sapiens
relation found in taxon
type abstract being
[{'concept': 'common name'}, 'found in taxon', 'Homo sapiens'] [{'concept': 'abstract being'}, 'found in taxon', 'Homo sapiens']
SELECT DISTINCT ( COUNT ( ?b ) AS ?h ) WHERE { VALUES ( ?s ) { ( ontology:common_name ) ( ontology:abstract_being ) } . ?b rdf:type ?s }
[]
common name abstract being
SYSTEM
4
Q21109172 Q18565875 Q21133358 Q21134592
(c(Q502895),P703,Q15978631) (c(Q15619164),P703,Q15978631)
action count
action union
action filter_type
action find_reverse
entity Q15978631
relation P703
type Q502895
action filter_type
action find_reverse
entity Q15978631
relation P703
type Q15619164
[ANSWER]
[{'concept': 'Q502895'}, 'P703', 'Q15978631'] [{'concept': 'Q15619164'}, 'P703', 'Q15978631']
SELECT DISTINCT ( COUNT ( ?b ) AS ?h ) WHERE { VALUES ( ?s ) { ( ontology:Q502895 ) ( ontology:Q15619164 ) } . ?b rdf:type ?s }
G protein-regulated inducer of neurite outgrowth 2 Cécile Croomy Killer cell immunoglobulin-like receptor 3DL1 Transmembrane epididymal protein 1
4
action count
action union
action filter_type
action find_reverse
entity Homo sapiens
relation found in taxon
type common name
action filter_type
action find_reverse
entity Homo sapiens
relation found in taxon
type abstract being
[{'concept': 'common name'}, 'found in taxon', 'Homo sapiens'] [{'concept': 'abstract being'}, 'found in taxon', 'Homo sapiens']
SELECT DISTINCT ( COUNT ( ?b ) AS ?h ) WHERE { VALUES ( ?s ) { ( ontology:common_name ) ( ontology:abstract_being ) } . ?b rdf:type ?s }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23081323
P702
Q181394
USER
What is the gene that is encoded by type VI secretion protein EvpB    ECL_01802 ?
(c(Q181394),P702,Q23081323)
action filter_type
action find_reverse
entity Q23081323
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23081323']
SELECT DISTINCT ?s WHERE { ?s property:P702 resource:Q23081323 . ?s rdf:type ontology:Q181394 }
type VI secretion protein EvpB    ECL_01802
action filter_type
action find_reverse
entity type VI secretion protein EvpB    ECL_01802
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'type VI secretion protein EvpB    ECL_01802']
SELECT DISTINCT ?s WHERE { ?s property:encoded_by resource:type_VI_secretion_protein_EvpB____ECL_01802 . ?s rdf:type ontology:nutrient }
[]
nutrient
Q24133362
SYSTEM
type VI secretion protein EvpB    ECL_01802
Q24133362
(c(Q181394),P702,Q23081323)
action filter_type
action find_reverse
entity Q23081323
relation P702
type Q181394
The gene that is encoded by type is type VI secretion protein EvpB ECL 01802
[{'concept': 'Q181394'}, 'P702', 'Q23081323']
SELECT DISTINCT ?s WHERE { ?s property:P702 resource:Q23081323 . ?s rdf:type ontology:Q181394 }
type VI secretion protein EvpB    ECL_01802
The gene that is encoded by type is type VI secretion protein EvpB ECL 01802
type VI secretion protein EvpB    ECL_01802
action filter_type
action find_reverse
entity type VI secretion protein EvpB    ECL_01802
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'type VI secretion protein EvpB    ECL_01802']
SELECT DISTINCT ?s WHERE { ?s property:encoded_by resource:type_VI_secretion_protein_EvpB____ECL_01802 . ?s rdf:type ontology:nutrient }
[]