Simple Question (Direct)
Simple Question
Q23435167
P702
Q863908
USER
Which gene encodes DNA-binding transcriptional regulator DsdC    VCA0876 ?
(Q23435167,P702,c(Q863908))
action filter_type
action find
entity Q23435167
relation P702
type Q863908
['Q23435167', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:Q863908 . resource:Q23435167 property:P702 ?y }
DNA-binding transcriptional regulator DsdC    VCA0876
action filter_type
action find
entity DNA-binding transcriptional regulator DsdC    VCA0876
relation encoded by
type nucleic acid sequence
['DNA-binding transcriptional regulator DsdC    VCA0876', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:nucleic_acid_sequence . resource:DNA-binding_transcriptional_regulator_DsdC____VCA0876 property:encoded_by ?y }
[]
nucleic acid sequence
Q23130549
SYSTEM
DNA-binding transcriptional regulator DsdC    VCA0876
Q23130549
(Q23435167,P702,c(Q863908))
action filter_type
action find
entity Q23435167
relation P702
type Q863908
DNA-binding transcriptional regulator DsdC VCA0876 encodes DNA-binding transcriptional regulator DsdC VCA0876
['Q23435167', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:Q863908 . resource:Q23435167 property:P702 ?y }
DNA-binding transcriptional regulator DsdC    VCA0876
DNA-binding transcriptional regulator DsdC VCA0876 encodes DNA-binding transcriptional regulator DsdC VCA0876
DNA-binding transcriptional regulator DsdC    VCA0876
action filter_type
action find
entity DNA-binding transcriptional regulator DsdC    VCA0876
relation encoded by
type nucleic acid sequence
['DNA-binding transcriptional regulator DsdC    VCA0876', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?y WHERE { ?y rdf:type ontology:nucleic_acid_sequence . resource:DNA-binding_transcriptional_regulator_DsdC____VCA0876 property:encoded_by ?y }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23130549
P688
Q181394
USER
What does that nucleic acid sequence encode ?
(Q23130549,P688,c(Q181394))
action filter_type
action find
entity Q23130549
relation P688
type Q181394
['Q23130549', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q181394 . resource:Q23130549 property:P688 ?c }
DNA-binding transcriptional regulator DsdC    VCA0876
action filter_type
action find
entity DNA-binding transcriptional regulator DsdC    VCA0876
relation encodes
type nutrient
['DNA-binding transcriptional regulator DsdC    VCA0876', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:nutrient . resource:DNA-binding_transcriptional_regulator_DsdC____VCA0876 property:encodes ?c }
[]
nutrient
Q23435167
SYSTEM
DNA-binding transcriptional regulator DsdC    VCA0876
Q23435167
(Q23130549,P688,c(Q181394))
action filter_type
action find
entity Q23130549
relation P688
type Q181394
That nucleic acid sequence encodes a DNA-binding transcriptional regulator DsdC VCA0876
['Q23130549', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q181394 . resource:Q23130549 property:P688 ?c }
DNA-binding transcriptional regulator DsdC    VCA0876
That nucleic acid sequence encodes a DNA-binding transcriptional regulator DsdC VCA0876
DNA-binding transcriptional regulator DsdC    VCA0876
action filter_type
action find
entity DNA-binding transcriptional regulator DsdC    VCA0876
relation encodes
type nutrient
['DNA-binding transcriptional regulator DsdC    VCA0876', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:nutrient . resource:DNA-binding_transcriptional_regulator_DsdC____VCA0876 property:encodes ?c }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Single entity type
Q21114926
P682
Q2996394 Q181394
USER
How many biological processes are greater number of nutrients involved in than complement-dependent cytotoxicity ?
(c(Q181394),P682,c(Q2996394))
action count
action greater
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
action count
action filter_type
action find
entity Q21114926
relation P682
type Q2996394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?u ) WHERE { { SELECT DISTINCT ?a ( COUNT ( ?g ) AS ?d ) WHERE { ?g property:P682 ?a . ?a rdf:type ontology:Q2996394 . ?g rdf:type ontology:Q181394 } GROUP BY ?a } . { SELECT DISTINCT ( COUNT ( ?t ) AS ?z ) WHERE { resource:Q21114926 property:P682 ?t . ?t rdf:type ontology:Q2996394 } } . FILTER ( ?d > ?z ) }
complement-dependent cytotoxicity
action count
action greater
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
action count
action filter_type
action find
entity complement-dependent cytotoxicity
relation biological process
type biological process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?u ) WHERE { { SELECT DISTINCT ?a ( COUNT ( ?g ) AS ?d ) WHERE { ?g property:biological_process ?a . ?a rdf:type ontology:biological_process . ?g rdf:type ontology:nutrient } GROUP BY ?a } . { SELECT DISTINCT ( COUNT ( ?t ) AS ?z ) WHERE { resource:complement-dependent_cytotoxicity property:biological_process ?t . ?t rdf:type ontology:biological_process } } . FILTER ( ?d > ?z ) }
[]
biological process nutrient
SYSTEM
107
Q22294591 Q21172195 Q14862258 Q22295734 Q14860201 Q288322 Q14902079 Q14863388 Q14904219 Q14911711 Q22271494 Q22294585 Q14860196 Q14860198 Q14864005 Q22269626 Q518328 Q22269531 Q847556 Q14897640 Q208353 Q14865609 Q21116174 Q14876119 Q14877671 Q22272257 Q21097540 Q14864099 Q21103041 Q21444598 Q21136671 Q21111890 Q21101822 Q14863654 Q22271536 Q22279989 Q14865397 Q15314382 Q14865659 Q14914558 Q22294730 Q14331109 Q21149516 Q187640 Q21130714 Q2663023 Q189159 Q14818032 Q22299432 Q14863467 Q21105147 Q21123910 Q15320925 Q163261 Q1612119 Q22298156 Q22269715 Q21119405 Q22297692 Q21130764 Q21750263 Q21762806 Q333666 Q21418091 Q14864443 Q14820875 Q21124921 Q21106668 Q14904764 Q21104990 Q14863664 Q14914008 Q21108563 Q21111494 Q14914540 Q21758676 Q22284328 Q21108938 Q21106266 Q14864210 Q14907898 Q21106018 Q22271479 Q22272219 Q14904772 Q14904771 Q14819471 Q14912956 Q21108839 Q14863453 Q14882364 Q14819856 Q21104832 Q22289134 Q14863538 Q14819911 Q14599729 Q22284230 Q14851921 Q24459846 Q21115817 Q14876924 Q14864904 Q14645719 Q14873676 Q21132115 Q21114820
(c(Q181394),P682,c(Q2996394))
action count
action greater
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
action count
action filter_type
action find
entity Q21114926
relation P682
type Q2996394
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?u ) WHERE { { SELECT DISTINCT ?a ( COUNT ( ?g ) AS ?d ) WHERE { ?g property:P682 ?a . ?a rdf:type ontology:Q2996394 . ?g rdf:type ontology:Q181394 } GROUP BY ?a } . { SELECT DISTINCT ( COUNT ( ?t ) AS ?z ) WHERE { resource:Q21114926 property:P682 ?t . ?t rdf:type ontology:Q2996394 } } . FILTER ( ?d > ?z ) }
mitotic cell cycle arrest in response to pheromone positive regulation of growth factor dependent skeletal muscle satellite cell proliferation dopamine uptake involved in synaptic transmission leukocyte activation anatomical structure development autophagy T cell mediated cytotoxicity response to external stimulus developmental process involved in reproduction male meiosis detoxification of arsenic-containing substance adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion developmental growth anatomical structure formation involved in morphogenesis ovulation cycle single-organism developmental process methylation filamentous growth protein folding synaptic vesicle docking circadian rhythm myeloid cell homeostasis synaptic vesicle targeting antigen processing and presentation cartilage condensation meiosis I DNA methylation involved in gamete generation ovulation cycle process protein unfolding positive regulation of flagellated sperm motility involved in capacitation female pronucleus assembly synaptic vesicle priming response to redox state multicellular organismal reproductive process response to pheromone involved in conjugation with cellular fusion gene conversion at mating-type locus, DNA double-strand break processing T cell selection natural killer cell mediated cytotoxicity tolerance induction nitrogen compound metabolic process karyogamy involved in conjugation with cellular fusion receptor localization to synapse organic substance metabolic process cell adhesion catabolic process cytolysis cell growth cell proliferation nitrogen utilization immune system development single organism reproductive process leukocyte mediated cytotoxicity locomotion involved in locomotory behavior acrosome reaction immune response maintenance of cell number budding cell bud growth single-organism behavior spore germination ultradian rhythm FtsZ-dependent cytokinesis primary metabolic process abscission antibody-dependent cellular cytotoxicity response to inactivity response to activity P granule organization synaptic vesicle fusion to presynaptic active zone membrane primary ovarian follicle growth spermatid nucleus differentiation neurotransmitter secretion biosynthetic process cellular response to stimulus activation of meiosis involved in egg activation female meiotic division carbon utilization peptide mating pheromone maturation involved in conjugation with cellular fusion preantral ovarian follicle growth carbohydrate utilization anatomical structure morphogenesis response to other organism cell separation after cytokinesis mycothiol-dependent detoxification detection of stimulus spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation leukocyte migration ovarian cumulus expansion adhesion of symbiont to host leukocyte homeostasis killing of cells of other organism feeding behavior synaptic vesicle exocytosis cellular component organization pigmentation response to stress response to estrogen cell wall organization or biogenesis hormone metabolic process intermicrovillar adhesion directional locomotion cellular metabolic process response to biotic stimulus locomotory behavior cell motility prevention of polyspermy spermatid nucleus elongation
107
action count
action greater
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
action count
action filter_type
action find
entity complement-dependent cytotoxicity
relation biological process
type biological process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?u ) WHERE { { SELECT DISTINCT ?a ( COUNT ( ?g ) AS ?d ) WHERE { ?g property:biological_process ?a . ?a rdf:type ontology:biological_process . ?g rdf:type ontology:nutrient } GROUP BY ?a } . { SELECT DISTINCT ( COUNT ( ?t ) AS ?z ) WHERE { resource:complement-dependent_cytotoxicity property:biological_process ?t . ?t rdf:type ontology:biological_process } } . FILTER ( ?d > ?z ) }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Single entity type|Incomplete
Q21104842
P682
Q2996394 Q181394
USER
And what about chromosome localization to nuclear envelope involved in homologous chromosome segregation?
(c(Q181394),P682,c(Q2996394))
action count
action greater
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
action count
action filter_type
action find
entity Q21104842
relation P682
type Q2996394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?q ) WHERE { { SELECT DISTINCT ?w ( COUNT ( ?o ) AS ?g ) WHERE { ?o property:P682 ?w . ?o rdf:type ontology:Q181394 . ?w rdf:type ontology:Q2996394 } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?z ) WHERE { resource:Q21104842 property:P682 ?k . ?k rdf:type ontology:Q2996394 } } . FILTER ( ?g > ?z ) }
chromosome localization to nuclear envelope involved in homologous chromosome segregation
action count
action greater
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
action count
action filter_type
action find
entity chromosome localization to nuclear envelope involved in homologous chromosome segregation
relation biological process
type biological process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?q ) WHERE { { SELECT DISTINCT ?w ( COUNT ( ?o ) AS ?g ) WHERE { ?o property:biological_process ?w . ?o rdf:type ontology:nutrient . ?w rdf:type ontology:biological_process } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?z ) WHERE { resource:chromosome_localization_to_nuclear_envelope_involved_in_homologous_chromosome_segregation property:biological_process ?k . ?k rdf:type ontology:biological_process } } . FILTER ( ?g > ?z ) }
[]
biological process nutrient
SYSTEM
107
Q22294591 Q21172195 Q14862258 Q22295734 Q14860201 Q288322 Q14902079 Q14863388 Q14904219 Q14911711 Q22271494 Q22294585 Q14860196 Q14860198 Q14864005 Q22269626 Q518328 Q22269531 Q847556 Q14897640 Q208353 Q14865609 Q21116174 Q14876119 Q14877671 Q22272257 Q21097540 Q14864099 Q21103041 Q21444598 Q21136671 Q21111890 Q21101822 Q14863654 Q22271536 Q22279989 Q14865397 Q15314382 Q14865659 Q14914558 Q22294730 Q14331109 Q21149516 Q187640 Q21130714 Q2663023 Q189159 Q14818032 Q22299432 Q14863467 Q21105147 Q21123910 Q15320925 Q163261 Q1612119 Q22298156 Q22269715 Q21119405 Q22297692 Q21130764 Q21750263 Q21762806 Q333666 Q21418091 Q14864443 Q14820875 Q21124921 Q21106668 Q14904764 Q21104990 Q14863664 Q14914008 Q21108563 Q21111494 Q14914540 Q21758676 Q22284328 Q21108938 Q21106266 Q14864210 Q14907898 Q21106018 Q22271479 Q22272219 Q14904772 Q14904771 Q14819471 Q14912956 Q21108839 Q14863453 Q14882364 Q14819856 Q21104832 Q22289134 Q14863538 Q14819911 Q14599729 Q22284230 Q14851921 Q24459846 Q21115817 Q14876924 Q14864904 Q14645719 Q14873676 Q21132115 Q21114820
(c(Q181394),P682,c(Q2996394))
action count
action greater
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
action count
action filter_type
action find
entity Q21104842
relation P682
type Q2996394
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?q ) WHERE { { SELECT DISTINCT ?w ( COUNT ( ?o ) AS ?g ) WHERE { ?o property:P682 ?w . ?o rdf:type ontology:Q181394 . ?w rdf:type ontology:Q2996394 } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?z ) WHERE { resource:Q21104842 property:P682 ?k . ?k rdf:type ontology:Q2996394 } } . FILTER ( ?g > ?z ) }
mitotic cell cycle arrest in response to pheromone positive regulation of growth factor dependent skeletal muscle satellite cell proliferation dopamine uptake involved in synaptic transmission leukocyte activation anatomical structure development autophagy T cell mediated cytotoxicity response to external stimulus developmental process involved in reproduction male meiosis detoxification of arsenic-containing substance adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion developmental growth anatomical structure formation involved in morphogenesis ovulation cycle single-organism developmental process methylation filamentous growth protein folding synaptic vesicle docking circadian rhythm myeloid cell homeostasis synaptic vesicle targeting antigen processing and presentation cartilage condensation meiosis I DNA methylation involved in gamete generation ovulation cycle process protein unfolding positive regulation of flagellated sperm motility involved in capacitation female pronucleus assembly synaptic vesicle priming response to redox state multicellular organismal reproductive process response to pheromone involved in conjugation with cellular fusion gene conversion at mating-type locus, DNA double-strand break processing T cell selection natural killer cell mediated cytotoxicity tolerance induction nitrogen compound metabolic process karyogamy involved in conjugation with cellular fusion receptor localization to synapse organic substance metabolic process cell adhesion catabolic process cytolysis cell growth cell proliferation nitrogen utilization immune system development single organism reproductive process leukocyte mediated cytotoxicity locomotion involved in locomotory behavior acrosome reaction immune response maintenance of cell number budding cell bud growth single-organism behavior spore germination ultradian rhythm FtsZ-dependent cytokinesis primary metabolic process abscission antibody-dependent cellular cytotoxicity response to inactivity response to activity P granule organization synaptic vesicle fusion to presynaptic active zone membrane primary ovarian follicle growth spermatid nucleus differentiation neurotransmitter secretion biosynthetic process cellular response to stimulus activation of meiosis involved in egg activation female meiotic division carbon utilization peptide mating pheromone maturation involved in conjugation with cellular fusion preantral ovarian follicle growth carbohydrate utilization anatomical structure morphogenesis response to other organism cell separation after cytokinesis mycothiol-dependent detoxification detection of stimulus spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation leukocyte migration ovarian cumulus expansion adhesion of symbiont to host leukocyte homeostasis killing of cells of other organism feeding behavior synaptic vesicle exocytosis cellular component organization pigmentation response to stress response to estrogen cell wall organization or biogenesis hormone metabolic process intermicrovillar adhesion directional locomotion cellular metabolic process response to biotic stimulus locomotory behavior cell motility prevention of polyspermy spermatid nucleus elongation
107
action count
action greater
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
action count
action filter_type
action find
entity chromosome localization to nuclear envelope involved in homologous chromosome segregation
relation biological process
type biological process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?q ) WHERE { { SELECT DISTINCT ?w ( COUNT ( ?o ) AS ?g ) WHERE { ?o property:biological_process ?w . ?o rdf:type ontology:nutrient . ?w rdf:type ontology:biological_process } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?z ) WHERE { resource:chromosome_localization_to_nuclear_envelope_involved_in_homologous_chromosome_segregation property:biological_process ?k . ?k rdf:type ontology:biological_process } } . FILTER ( ?g > ?z ) }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q2996394 Q181394
USER
How many biological processes are a biological processes that atleast 271 nutrients are involved in ?
(c(Q181394),P682,c(Q2996394))
action count
action atleast
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
value 271
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?f ) WHERE { { SELECT DISTINCT ?m ( COUNT ( ?k ) AS ?l ) WHERE { ?k property:P682 ?m . ?k rdf:type ontology:Q181394 . ?m rdf:type ontology:Q2996394 } GROUP BY ?m } . FILTER ( ?l >= 271 ) }
action count
action atleast
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
value 271
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?f ) WHERE { { SELECT DISTINCT ?m ( COUNT ( ?k ) AS ?l ) WHERE { ?k property:biological_process ?m . ?k rdf:type ontology:nutrient . ?m rdf:type ontology:biological_process } GROUP BY ?m } . FILTER ( ?l >= 271 ) }
[]
biological process nutrient
SYSTEM
10
Q288322 Q518328 Q847556 Q14914558 Q187640 Q14818032 Q1612119 Q21750263 Q14914008 Q14819911
(c(Q181394),P682,c(Q2996394))
action count
action atleast
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
value 271
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?f ) WHERE { { SELECT DISTINCT ?m ( COUNT ( ?k ) AS ?l ) WHERE { ?k property:P682 ?m . ?k rdf:type ontology:Q181394 . ?m rdf:type ontology:Q2996394 } GROUP BY ?m } . FILTER ( ?l >= 271 ) }
autophagy methylation protein folding nitrogen compound metabolic process cell adhesion cell proliferation immune response FtsZ-dependent cytokinesis biosynthetic process response to stress
10
action count
action atleast
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
value 271
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?f ) WHERE { { SELECT DISTINCT ?m ( COUNT ( ?k ) AS ?l ) WHERE { ?k property:biological_process ?m . ?k rdf:type ontology:nutrient . ?m rdf:type ontology:biological_process } GROUP BY ?m } . FILTER ( ?l >= 271 ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q27109054 Q23130549
P702
Q181394
USER
Which nutrients do DNA-binding transcriptional regulator DsdC    VCA0876 or bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036 encode ?
OR((c(Q181394),P702,Q23130549), (c(Q181394),P702,Q27109054))
action filter_type
action union
action find_reverse
entity Q23130549
relation P702
action find_reverse
entity Q27109054
relation P702
type Q181394
{'OR': [[{'concept': 'Q181394'}, 'P702', 'Q23130549'], [{'concept': 'Q181394'}, 'P702', 'Q27109054']]}
SELECT DISTINCT ?u WHERE { { VALUES ( ?y ) { ( resource:Q23130549 ) ( resource:Q27109054 ) } . ?u property:P702 ?y } . ?u rdf:type ontology:Q181394 }
bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036 DNA-binding transcriptional regulator DsdC    VCA0876
action filter_type
action union
action find_reverse
entity DNA-binding transcriptional regulator DsdC    VCA0876
relation encoded by
action find_reverse
entity bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
relation encoded by
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'encoded by', 'DNA-binding transcriptional regulator DsdC    VCA0876'], [{'concept': 'nutrient'}, 'encoded by', 'bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036']]}
SELECT DISTINCT ?u WHERE { { VALUES ( ?y ) { ( resource:DNA-binding_transcriptional_regulator_DsdC____VCA0876 ) ( resource:bifunctional_D-hydantoinase/dihydropyrimidinase____PP_4036 ) } . ?u property:encoded_by ?y } . ?u rdf:type ontology:nutrient }
[]
nutrient
Q23435167 Q27176930
SYSTEM
DNA-binding transcriptional regulator DsdC    VCA0876, bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
Q23435167 Q27176930
OR((c(Q181394),P702,Q23130549), (c(Q181394),P702,Q27109054))
action filter_type
action union
action find_reverse
entity Q23130549
relation P702
action find_reverse
entity Q27109054
relation P702
type Q181394
[ANSWERS]
{'OR': [[{'concept': 'Q181394'}, 'P702', 'Q23130549'], [{'concept': 'Q181394'}, 'P702', 'Q27109054']]}
SELECT DISTINCT ?u WHERE { { VALUES ( ?y ) { ( resource:Q23130549 ) ( resource:Q27109054 ) } . ?u property:P702 ?y } . ?u rdf:type ontology:Q181394 }
DNA-binding transcriptional regulator DsdC    VCA0876 bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
DNA-binding transcriptional regulator DsdC VCA0876 and bifunctional D-hydantoinase/dihydropyrimidinase PP 4036 do DNA-binding transcriptional regulator DsdC VCA0876 or bifunctional D-hydantoinase/dihydropyrimidinase PP_4036 encode
DNA-binding transcriptional regulator DsdC    VCA0876 bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
action filter_type
action union
action find_reverse
entity DNA-binding transcriptional regulator DsdC    VCA0876
relation encoded by
action find_reverse
entity bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
relation encoded by
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'encoded by', 'DNA-binding transcriptional regulator DsdC    VCA0876'], [{'concept': 'nutrient'}, 'encoded by', 'bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036']]}
SELECT DISTINCT ?u WHERE { { VALUES ( ?y ) { ( resource:DNA-binding_transcriptional_regulator_DsdC____VCA0876 ) ( resource:bifunctional_D-hydantoinase/dihydropyrimidinase____PP_4036 ) } . ?u property:encoded_by ?y } . ?u rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q14353168 Q27109054
P702 P680
Q181394
USER
Which nutrients are encoded by bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036 and have hydrolase activity as their molecular function ?
AND((c(Q181394),P702,Q27109054), (c(Q181394),P680,Q14353168))
action filter_type
action intersection
action find_reverse
entity Q27109054
relation P702
action find_reverse
entity Q14353168
relation P680
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q27109054'], [{'concept': 'Q181394'}, 'P680', 'Q14353168']]}
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q181394 . ?o property:P702 resource:Q27109054 . ?o property:P680 resource:Q14353168 }
hydrolase activity bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
action filter_type
action intersection
action find_reverse
entity bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
relation encoded by
action find_reverse
entity hydrolase activity
relation molecular function
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036'], [{'concept': 'nutrient'}, 'molecular function', 'hydrolase activity']]}
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:nutrient . ?o property:encoded_by resource:bifunctional_D-hydantoinase/dihydropyrimidinase____PP_4036 . ?o property:molecular_function resource:hydrolase_activity }
[]
nutrient
Q27176930
SYSTEM
bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
Q27176930
AND((c(Q181394),P702,Q27109054), (c(Q181394),P680,Q14353168))
action filter_type
action intersection
action find_reverse
entity Q27109054
relation P702
action find_reverse
entity Q14353168
relation P680
type Q181394
Bifunctional D-hydantoinase/dihydropyrimidinase PP 4036 is encoded by bifunctional D-hydantoinase/dihydropyrimidinase PP_4036 and have hydrolase activity as their molecular function
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q27109054'], [{'concept': 'Q181394'}, 'P680', 'Q14353168']]}
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q181394 . ?o property:P702 resource:Q27109054 . ?o property:P680 resource:Q14353168 }
bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
Bifunctional D-hydantoinase/dihydropyrimidinase PP 4036 is encoded by bifunctional D-hydantoinase/dihydropyrimidinase PP_4036 and have hydrolase activity as their molecular function
bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
action filter_type
action intersection
action find_reverse
entity bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
relation encoded by
action find_reverse
entity hydrolase activity
relation molecular function
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036'], [{'concept': 'nutrient'}, 'molecular function', 'hydrolase activity']]}
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:nutrient . ?o property:encoded_by resource:bifunctional_D-hydantoinase/dihydropyrimidinase____PP_4036 . ?o property:molecular_function resource:hydrolase_activity }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23130549
P703
Q16521
USER
Where is DNA-binding transcriptional regulator DsdC    VCA0876 found ?
(Q23130549,P703,c(Q16521))
action filter_type
action find
entity Q23130549
relation P703
type Q16521
['Q23130549', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q16521 . resource:Q23130549 property:P703 ?b }
DNA-binding transcriptional regulator DsdC    VCA0876
action filter_type
action find
entity DNA-binding transcriptional regulator DsdC    VCA0876
relation found in taxon
type taxon
['DNA-binding transcriptional regulator DsdC    VCA0876', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:taxon . resource:DNA-binding_transcriptional_regulator_DsdC____VCA0876 property:found_in_taxon ?b }
[]
taxon
Q21102945
SYSTEM
Vibrio cholerae O1 biovar El Tor str. N16961
Q21102945
(Q23130549,P703,c(Q16521))
action filter_type
action find
entity Q23130549
relation P703
type Q16521
DNA-binding transcriptional regulator DsdC VCA0876 is found in [ANSWER]
['Q23130549', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q16521 . resource:Q23130549 property:P703 ?b }
Vibrio cholerae O1 biovar El Tor str. N16961
DNA-binding transcriptional regulator DsdC VCA0876 is found in Vibrio cholerae O1 biovar El Tor str. N16961
Vibrio cholerae O1 biovar El Tor str. N16961
action filter_type
action find
entity DNA-binding transcriptional regulator DsdC    VCA0876
relation found in taxon
type taxon
['DNA-binding transcriptional regulator DsdC    VCA0876', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:taxon . resource:DNA-binding_transcriptional_regulator_DsdC____VCA0876 property:found_in_taxon ?b }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27176930
P681
Q15989253
USER
Which is the cell component of bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036 ?
(Q27176930,P681,c(Q15989253))
action filter_type
action find
entity Q27176930
relation P681
type Q15989253
['Q27176930', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q27176930 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
action filter_type
action find
entity bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
relation cell component
type part
['bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:bifunctional_D-hydantoinase/dihydropyrimidinase____PP_4036 property:cell_component ?e . ?e rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q27176930,P681,c(Q15989253))
action filter_type
action find
entity Q27176930
relation P681
type Q15989253
[ANSWER] is the cell component of bifunctional D-hydantoinase/dihydropyrimidinase PP_4036
['Q27176930', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q27176930 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
cytoplasm
Cytoplasm is the cell component of bifunctional D-hydantoinase/dihydropyrimidinase PP_4036
cytoplasm
action filter_type
action find
entity bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036
relation cell component
type part
['bifunctional D-hydantoinase/dihydropyrimidinase    PP_4036', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:bifunctional_D-hydantoinase/dihydropyrimidinase____PP_4036 property:cell_component ?e . ?e rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23491798
Q15989253
USER
And also tell me about translation initiation factor IF-1    SMU_2004?
(Q23491798,P681,c(Q15989253))
action filter_type
action find
entity Q23491798
relation P681
type Q15989253
['Q23491798', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { resource:Q23491798 property:P681 ?n . ?n rdf:type ontology:Q15989253 }
translation initiation factor IF-1    SMU_2004
action filter_type
action find
entity translation initiation factor IF-1    SMU_2004
relation cell component
type part
['translation initiation factor IF-1    SMU_2004', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { resource:translation_initiation_factor_IF-1____SMU_2004 property:cell_component ?n . ?n rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23491798,P681,c(Q15989253))
action filter_type
action find
entity Q23491798
relation P681
type Q15989253
[ANSWER]
['Q23491798', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { resource:Q23491798 property:P681 ?n . ?n rdf:type ontology:Q15989253 }
cytoplasm
cytoplasm
action filter_type
action find
entity translation initiation factor IF-1    SMU_2004
relation cell component
type part
['translation initiation factor IF-1    SMU_2004', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { resource:translation_initiation_factor_IF-1____SMU_2004 property:cell_component ?n . ?n rdf:type ontology:part }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q79899 Q908765
P681
Q181394
USER
Is that part a cell component of Hepatic triacylglycerol lipase ?
(Q908765,P681,Q79899)
action is_in
entity Q908765
action find
entity Q79899
relation P681
['Q908765', 'P681', 'Q79899']
ASK WHERE { resource:Q79899 property:P681 resource:Q908765 }
cytoplasm Hepatic triacylglycerol lipase
action is_in
entity Hepatic triacylglycerol lipase
action find
entity cytoplasm
relation cell component
['Hepatic triacylglycerol lipase', 'cell component', 'cytoplasm']
ASK WHERE { resource:cytoplasm property:cell_component resource:Hepatic_triacylglycerol_lipase }
[]
nutrient
SYSTEM
NO
(Q908765,P681,Q79899)
action is_in
entity Q908765
action find
entity Q79899
relation P681
[ANSWER]
['Q908765', 'P681', 'Q79899']
ASK WHERE { resource:Q79899 property:P681 resource:Q908765 }
No
action is_in
entity Hepatic triacylglycerol lipase
action find
entity cytoplasm
relation cell component
['Hepatic triacylglycerol lipase', 'cell component', 'cytoplasm']
ASK WHERE { resource:cytoplasm property:cell_component resource:Hepatic_triacylglycerol_lipase }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P180
Q16521 Q386724 Q3516658
USER
Which taxons are depicted in max number of works and heraldic symbols ?
(c(Q386724)|c(Q3516658),P180,c(Q16521))
action argmax
action union
action find_reverse_tuple_counts
relation P180
type Q16521
type Q386724
action find_reverse_tuple_counts
relation P180
type Q16521
type Q3516658
[[{'concept': 'Q386724'}, {'concept': 'Q3516658'}], 'P180', {'concept': 'Q16521'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ( MAX ( ?x ) AS ?m ) { SELECT DISTINCT ( COUNT ( ?p ) AS ?x ) ?c WHERE { VALUES ( ?j ) { ( ontology:Q386724 ) ( ontology:Q3516658 ) } . ?p rdf:type ?j } GROUP BY ?c } } . { SELECT DISTINCT ( COUNT ( ?h ) AS ?f ) ?w WHERE { { ?h property:P180 ?w . ?h rdf:type ontology:Q386724 . ?w rdf:type ontology:Q16521 } UNION { ?h property:P180 ?w . ?w rdf:type ontology:Q16521 . ?h rdf:type ontology:Q3516658 } } GROUP BY ?w } . FILTER ( ?f = ?m ) }
action argmax
action union
action find_reverse_tuple_counts
relation depicts
type taxon
type work
action find_reverse_tuple_counts
relation depicts
type taxon
type heraldic symbol
[[{'concept': 'work'}, {'concept': 'heraldic symbol'}], 'depicts', {'concept': 'taxon'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ( MAX ( ?x ) AS ?m ) { SELECT DISTINCT ( COUNT ( ?p ) AS ?x ) ?c WHERE { VALUES ( ?j ) { ( ontology:work ) ( ontology:heraldic_symbol ) } . ?p rdf:type ?j } GROUP BY ?c } } . { SELECT DISTINCT ( COUNT ( ?h ) AS ?f ) ?w WHERE { { ?h property:depicts ?w . ?h rdf:type ontology:work . ?w rdf:type ontology:taxon } UNION { ?h property:depicts ?w . ?w rdf:type ontology:taxon . ?h rdf:type ontology:heraldic_symbol } } GROUP BY ?w } . FILTER ( ?f = ?m ) }
[]
taxon work heraldic symbol
Q2102 Q104212 Q140
SYSTEM
snake, common hop, lion
Q3916957 Q44789 Q2102 Q39918 Q13189 Q157952 Q104212 Q25239 Q2934 Q44120 Q140 Q147641 Q156901 Q34706
(c(Q386724)|c(Q3516658),P180,c(Q16521))
action argmax
action union
action find_reverse_tuple_counts
relation P180
type Q16521
type Q386724
action find_reverse_tuple_counts
relation P180
type Q16521
type Q3516658
[ANSWERS] are depicted in max number of works and heraldic symbols
[[{'concept': 'Q386724'}, {'concept': 'Q3516658'}], 'P180', {'concept': 'Q16521'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ( MAX ( ?x ) AS ?m ) { SELECT DISTINCT ( COUNT ( ?p ) AS ?x ) ?c WHERE { VALUES ( ?j ) { ( ontology:Q386724 ) ( ontology:Q3516658 ) } . ?p rdf:type ?j } GROUP BY ?c } } . { SELECT DISTINCT ( COUNT ( ?h ) AS ?f ) ?w WHERE { { ?h property:P180 ?w . ?h rdf:type ontology:Q386724 . ?w rdf:type ontology:Q16521 } UNION { ?h property:P180 ?w . ?w rdf:type ontology:Q16521 . ?h rdf:type ontology:Q3516658 } } GROUP BY ?w } . FILTER ( ?f = ?m ) }
turnip Morus snake Prunus dulcis Prunus persica Dracaena draco common hop alder goat Prunus domestica lion Aquilegia Iris leopard
Snake, common hop and lion are depicted in max number of works and heraldic symbols
snake common hop lion
action argmax
action union
action find_reverse_tuple_counts
relation depicts
type taxon
type work
action find_reverse_tuple_counts
relation depicts
type taxon
type heraldic symbol
[[{'concept': 'work'}, {'concept': 'heraldic symbol'}], 'depicts', {'concept': 'taxon'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ( MAX ( ?x ) AS ?m ) { SELECT DISTINCT ( COUNT ( ?p ) AS ?x ) ?c WHERE { VALUES ( ?j ) { ( ontology:work ) ( ontology:heraldic_symbol ) } . ?p rdf:type ?j } GROUP BY ?c } } . { SELECT DISTINCT ( COUNT ( ?h ) AS ?f ) ?w WHERE { { ?h property:depicts ?w . ?h rdf:type ontology:work . ?w rdf:type ontology:taxon } UNION { ?h property:depicts ?w . ?w rdf:type ontology:taxon . ?h rdf:type ontology:heraldic_symbol } } GROUP BY ?w } . FILTER ( ?f = ?m ) }
[]