Simple Question (Direct)
Simple Question
Q21107437
P682
Q2996394
USER
What is the biological process that GSK-3-binding protein FRAT2 is involved in ?
(Q21107437,P682,c(Q2996394))
action filter_type
action find
entity Q21107437
relation P682
type Q2996394
['Q21107437', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?d WHERE { resource:Q21107437 property:P682 ?d . ?d rdf:type ontology:Q2996394 }
GSK-3-binding protein FRAT2
action filter_type
action find
entity GSK-3-binding protein FRAT2
relation biological process
type biological process
['GSK-3-binding protein FRAT2', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?d WHERE { resource:GSK-3-binding_protein_FRAT2 property:biological_process ?d . ?d rdf:type ontology:biological_process }
[]
biological process
Q14818032
SYSTEM
cell proliferation
Q14818032
(Q21107437,P682,c(Q2996394))
action filter_type
action find
entity Q21107437
relation P682
type Q2996394
The biological process that GSK-3-binding protein FRAT2 is involved in is l [ANSWER]
['Q21107437', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?d WHERE { resource:Q21107437 property:P682 ?d . ?d rdf:type ontology:Q2996394 }
cell proliferation
The biological process that GSK-3-binding protein FRAT2 is involved in is l cell proliferation
cell proliferation
action filter_type
action find
entity GSK-3-binding protein FRAT2
relation biological process
type biological process
['GSK-3-binding protein FRAT2', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?d WHERE { resource:GSK-3-binding_protein_FRAT2 property:biological_process ?d . ?d rdf:type ontology:biological_process }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21107437
P702
Q863908
USER
What is the gene that encodes GSK-3-binding protein FRAT2 ?
(Q21107437,P702,c(Q863908))
action filter_type
action find
entity Q21107437
relation P702
type Q863908
['Q21107437', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?p WHERE { resource:Q21107437 property:P702 ?p . ?p rdf:type ontology:Q863908 }
GSK-3-binding protein FRAT2
action filter_type
action find
entity GSK-3-binding protein FRAT2
relation encoded by
type nucleic acid sequence
['GSK-3-binding protein FRAT2', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?p WHERE { resource:GSK-3-binding_protein_FRAT2 property:encoded_by ?p . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18037151
SYSTEM
FRAT2
Q18037151
(Q21107437,P702,c(Q863908))
action filter_type
action find
entity Q21107437
relation P702
type Q863908
The gene that encodes GSK-3-binding protein [ANSWER] is named [ANSWER]
['Q21107437', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?p WHERE { resource:Q21107437 property:P702 ?p . ?p rdf:type ontology:Q863908 }
FRAT2
The gene that encodes GSK-3-binding protein FRAT2 is named FRAT2
FRAT2
action filter_type
action find
entity GSK-3-binding protein FRAT2
relation encoded by
type nucleic acid sequence
['GSK-3-binding protein FRAT2', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?p WHERE { resource:GSK-3-binding_protein_FRAT2 property:encoded_by ?p . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18037151
P684
Q863908
USER
What is the name of the species that has that one as its orthologous gene ?
(c(Q863908),P684,Q18037151)
action filter_type
action find
entity Q18037151
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18037151']
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:Q863908 . resource:Q18037151 property:P684 ?s }
FRAT2
action filter_type
action find
entity FRAT2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'FRAT2']
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:nucleic_acid_sequence . resource:FRAT2 property:ortholog ?s }
[]
nucleic acid sequence
Q18296363
SYSTEM
Frat2
Q18296363
(c(Q863908),P684,Q18037151)
action filter_type
action find
entity Q18037151
relation P684
type Q863908
The name of the species that has that one as its orthologous gene is the [ANSWER]
[{'concept': 'Q863908'}, 'P684', 'Q18037151']
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:Q863908 . resource:Q18037151 property:P684 ?s }
Frat2
The name of the species that has that one as its orthologous gene is the Frat2
Frat2
action filter_type
action find
entity FRAT2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'FRAT2']
SELECT DISTINCT ?s WHERE { ?s rdf:type ontology:nucleic_acid_sequence . resource:FRAT2 property:ortholog ?s }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q18261909 Q18296363
P684
Q863908
USER
Which nucleic acid sequences are an orthologous gene for Frat2 or Metap1d ?
OR((Q18296363,P684,c(Q863908)), (Q18261909,P684,c(Q863908)))
action filter_type
action union
action find
entity Q18296363
relation P684
action find
entity Q18261909
relation P684
type Q863908
{'OR': [['Q18296363', 'P684', {'concept': 'Q863908'}], ['Q18261909', 'P684', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q18296363 property:P684 ?q } UNION { resource:Q18261909 property:P684 ?q } } . ?q rdf:type ontology:Q863908 }
Metap1d Frat2
action filter_type
action union
action find
entity Frat2
relation ortholog
action find
entity Metap1d
relation ortholog
type nucleic acid sequence
{'OR': [['Frat2', 'ortholog', {'concept': 'nucleic acid sequence'}], ['Metap1d', 'ortholog', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Frat2 property:ortholog ?q } UNION { resource:Metap1d property:ortholog ?q } } . ?q rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18053723 Q18037151
SYSTEM
METAP1D, FRAT2
Q18053723 Q18037151
OR((Q18296363,P684,c(Q863908)), (Q18261909,P684,c(Q863908)))
action filter_type
action union
action find
entity Q18296363
relation P684
action find
entity Q18261909
relation P684
type Q863908
[ANSWERS] are an orthologous gene for Frat2 or Metap1d
{'OR': [['Q18296363', 'P684', {'concept': 'Q863908'}], ['Q18261909', 'P684', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q18296363 property:P684 ?q } UNION { resource:Q18261909 property:P684 ?q } } . ?q rdf:type ontology:Q863908 }
METAP1D FRAT2
METAP1D and FRAT2 are an orthologous gene for Frat2 or Metap1d
METAP1D FRAT2
action filter_type
action union
action find
entity Frat2
relation ortholog
action find
entity Metap1d
relation ortholog
type nucleic acid sequence
{'OR': [['Frat2', 'ortholog', {'concept': 'nucleic acid sequence'}], ['Metap1d', 'ortholog', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Frat2 property:ortholog ?q } UNION { resource:Metap1d property:ortholog ?q } } . ?q rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18053723
P688
Q181394
USER
Which nutrient is METAP1D an encoding of ?
(Q18053723,P688,c(Q181394))
action filter_type
action find
entity Q18053723
relation P688
type Q181394
['Q18053723', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q181394 . resource:Q18053723 property:P688 ?w }
METAP1D
action filter_type
action find
entity METAP1D
relation encodes
type nutrient
['METAP1D', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:nutrient . resource:METAP1D property:encodes ?w }
[]
nutrient
Q21119975
SYSTEM
Methionine aminopeptidase 1D, mitochondrial
Q21119975
(Q18053723,P688,c(Q181394))
action filter_type
action find
entity Q18053723
relation P688
type Q181394
[ANSWER] is METAP1D an encoding of
['Q18053723', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q181394 . resource:Q18053723 property:P688 ?w }
Methionine aminopeptidase 1D, mitochondrial
Methionine aminopeptidase 1D, mitochondrial is METAP1D an encoding of
Methionine aminopeptidase 1D, mitochondrial
action filter_type
action find
entity METAP1D
relation encodes
type nutrient
['METAP1D', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:nutrient . resource:METAP1D property:encodes ?w }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23217693
Q181394
USER
And how about serine protease HtrA    SMU_2164?
(Q23217693,P688,c(Q181394))
action filter_type
action find
entity Q23217693
relation P688
type Q181394
['Q23217693', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { resource:Q23217693 property:P688 ?t . ?t rdf:type ontology:Q181394 }
serine protease HtrA    SMU_2164
action filter_type
action find
entity serine protease HtrA    SMU_2164
relation encodes
type nutrient
['serine protease HtrA    SMU_2164', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { resource:serine_protease_HtrA____SMU_2164 property:encodes ?t . ?t rdf:type ontology:nutrient }
[]
nutrient
Q23491173
SYSTEM
serine protease HtrA    SMU_2164
Q23491173
(Q23217693,P688,c(Q181394))
action filter_type
action find
entity Q23217693
relation P688
type Q181394
[ANSWER]
['Q23217693', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { resource:Q23217693 property:P688 ?t . ?t rdf:type ontology:Q181394 }
serine protease HtrA    SMU_2164
serine protease HtrA    SMU_2164
action filter_type
action find
entity serine protease HtrA    SMU_2164
relation encodes
type nutrient
['serine protease HtrA    SMU_2164', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { resource:serine_protease_HtrA____SMU_2164 property:encodes ?t . ?t rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q23491173 Q23217693
P688
Q863908
USER
Does serine protease HtrA    SMU_2164 encode that nutrient ?
(Q23217693,P688,Q23491173)
action is_in
entity Q23491173
action find
entity Q23217693
relation P688
['Q23217693', 'P688', 'Q23491173']
ASK WHERE { resource:Q23217693 property:P688 resource:Q23491173 }
serine protease HtrA    SMU_2164 serine protease HtrA    SMU_2164
action is_in
entity serine protease HtrA    SMU_2164
action find
entity serine protease HtrA    SMU_2164
relation encodes
['serine protease HtrA    SMU_2164', 'encodes', 'serine protease HtrA    SMU_2164']
ASK WHERE { resource:serine_protease_HtrA____SMU_2164 property:encodes resource:serine_protease_HtrA____SMU_2164 }
[]
nucleic acid sequence
SYSTEM
YES
(Q23217693,P688,Q23491173)
action is_in
entity Q23491173
action find
entity Q23217693
relation P688
[ANSWER]
['Q23217693', 'P688', 'Q23491173']
ASK WHERE { resource:Q23217693 property:P688 resource:Q23491173 }
Yes
action is_in
entity serine protease HtrA    SMU_2164
action find
entity serine protease HtrA    SMU_2164
relation encodes
['serine protease HtrA    SMU_2164', 'encodes', 'serine protease HtrA    SMU_2164']
ASK WHERE { resource:serine_protease_HtrA____SMU_2164 property:encodes resource:serine_protease_HtrA____SMU_2164 }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q18296363 Q24375110 Q23376433
P684
Q863908
USER
Is LOC103691993 and PepSY-associated TM helix    Rru_A2315 an orthlogous gene of Frat2 ?
(Q18296363,P684,Q24375110) (Q18296363,P684,Q23376433)
action is_in
entity Q18296363
action intersection
action find_reverse
entity Q24375110
relation P684
action find_reverse
entity Q23376433
relation P684
['Q18296363', 'P684', 'Q24375110'] ['Q18296363', 'P684', 'Q23376433']
ASK WHERE { resource:Q18296363 property:P684 resource:Q24375110 . resource:Q18296363 property:P684 resource:Q23376433 }
Frat2 LOC103691993 PepSY-associated TM helix    Rru_A2315
action is_in
entity Frat2
action intersection
action find_reverse
entity LOC103691993
relation ortholog
action find_reverse
entity PepSY-associated TM helix    Rru_A2315
relation ortholog
['Frat2', 'ortholog', 'LOC103691993'] ['Frat2', 'ortholog', 'PepSY-associated TM helix    Rru_A2315']
ASK WHERE { resource:Frat2 property:ortholog resource:LOC103691993 . resource:Frat2 property:ortholog resource:PepSY-associated_TM_helix____Rru_A2315 }
[]
nucleic acid sequence
SYSTEM
NO
(Q18296363,P684,Q24375110) (Q18296363,P684,Q23376433)
action is_in
entity Q18296363
action intersection
action find_reverse
entity Q24375110
relation P684
action find_reverse
entity Q23376433
relation P684
[ANSWER]
['Q18296363', 'P684', 'Q24375110'] ['Q18296363', 'P684', 'Q23376433']
ASK WHERE { resource:Q18296363 property:P684 resource:Q24375110 . resource:Q18296363 property:P684 resource:Q23376433 }
No
action is_in
entity Frat2
action intersection
action find_reverse
entity LOC103691993
relation ortholog
action find_reverse
entity PepSY-associated TM helix    Rru_A2315
relation ortholog
['Frat2', 'ortholog', 'LOC103691993'] ['Frat2', 'ortholog', 'PepSY-associated TM helix    Rru_A2315']
ASK WHERE { resource:Frat2 property:ortholog resource:LOC103691993 . resource:Frat2 property:ortholog resource:PepSY-associated_TM_helix____Rru_A2315 }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P361
Q9332 Q2996394 Q2996394
USER
Which biological processes are a component of max number of behaviors or biological processes ?
(c(Q2996394),P361,c(Q9332)|c(Q2996394))
action argmax
action union
action find_tuple_counts
relation P361
type Q2996394
type Q9332
action find_tuple_counts
relation P361
type Q2996394
type Q2996394
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q9332'}, {'concept': 'Q2996394'}]]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ( MAX ( ?q ) AS ?x ) { SELECT DISTINCT ( COUNT ( ?t ) AS ?q ) ?z WHERE { VALUES ( ?f ) { ( ontology:Q2996394 ) ( ontology:Q9332 ) } . ?t rdf:type ?f } GROUP BY ?z } } . { SELECT DISTINCT ( COUNT ( ?d ) AS ?j ) ?k WHERE { { ?k property:P361 ?d . ?d rdf:type ontology:Q2996394 . ?k rdf:type ontology:Q2996394 } UNION { ?k property:P361 ?d . ?k rdf:type ontology:Q2996394 . ?d rdf:type ontology:Q9332 } } GROUP BY ?k } . FILTER ( ?j = ?x ) }
action argmax
action union
action find_tuple_counts
relation part of
type biological process
type behavior
action find_tuple_counts
relation part of
type biological process
type biological process
[{'concept': 'biological process'}, 'part of', [{'concept': 'behavior'}, {'concept': 'biological process'}]]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ( MAX ( ?q ) AS ?x ) { SELECT DISTINCT ( COUNT ( ?t ) AS ?q ) ?z WHERE { VALUES ( ?f ) { ( ontology:biological_process ) ( ontology:behavior ) } . ?t rdf:type ?f } GROUP BY ?z } } . { SELECT DISTINCT ( COUNT ( ?d ) AS ?j ) ?k WHERE { { ?k property:part_of ?d . ?d rdf:type ontology:biological_process . ?k rdf:type ontology:biological_process } UNION { ?k property:part_of ?d . ?k rdf:type ontology:biological_process . ?d rdf:type ontology:behavior } } GROUP BY ?k } . FILTER ( ?j = ?x ) }
[]
behavior biological process biological process
Q22291145 Q21104832 Q22294591
SYSTEM
establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification, synaptic vesicle exocytosis, mitotic cell cycle arrest in response to pheromone
Q22294591 Q22294585 Q14860198 Q949618 Q14897640 Q21116174 Q14864099 Q22280551 Q21111890 Q22279989 Q27122058 Q14865659 Q14914558 Q21149516 Q22279517 Q22281166 Q22284167 Q16007097 Q22279591 Q15320925 Q22291145 Q22294726 Q21127160 Q21106668 Q22280424 Q14864210 Q22302766 Q22294463 Q14864899 Q14904772 Q14904771 Q22279704 Q21104832 Q14873676 Q21114820
(c(Q2996394),P361,c(Q9332)|c(Q2996394))
action argmax
action union
action find_tuple_counts
relation P361
type Q2996394
type Q9332
action find_tuple_counts
relation P361
type Q2996394
type Q2996394
The [ANSWERS] are a component of max number of behaviors or biological processes
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q9332'}, {'concept': 'Q2996394'}]]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ( MAX ( ?q ) AS ?x ) { SELECT DISTINCT ( COUNT ( ?t ) AS ?q ) ?z WHERE { VALUES ( ?f ) { ( ontology:Q2996394 ) ( ontology:Q9332 ) } . ?t rdf:type ?f } GROUP BY ?z } } . { SELECT DISTINCT ( COUNT ( ?d ) AS ?j ) ?k WHERE { { ?k property:P361 ?d . ?d rdf:type ontology:Q2996394 . ?k rdf:type ontology:Q2996394 } UNION { ?k property:P361 ?d . ?k rdf:type ontology:Q2996394 . ?d rdf:type ontology:Q9332 } } GROUP BY ?k } . FILTER ( ?j = ?x ) }
mitotic cell cycle arrest in response to pheromone adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion anatomical structure formation involved in morphogenesis Taxis synaptic vesicle docking synaptic vesicle targeting ovulation cycle process gene conversion at mating-type locus, termination of copy-synthesis synaptic vesicle priming gene conversion at mating-type locus, DNA double-strand break processing synaptic vesicle tethering involved in synaptic vesicle exocytosis tolerance induction nitrogen compound metabolic process organic substance metabolic process heteroduplex formation involved in gene conversion at mating-type locus gene conversion at mating-type locus, DNA double-strand break formation peptidyl-serine phosphorylation involved in acrosome reaction habit strand invasion involved in gene conversion at mating-type locus locomotion involved in locomotory behavior establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification DNA recombinase assembly involved in gene conversion at mating-type locus fertilization, exchange of chromosomal proteins synaptic vesicle fusion to presynaptic active zone membrane somatic diversification of immune receptors anatomical structure morphogenesis calcium-dependent activation of synaptic vesicle fusion sperm chromatin decondensation acrosome matrix dispersal spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation gene conversion at mating-type locus, DNA repair synthesis synaptic vesicle exocytosis cell motility spermatid nucleus elongation
The establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification, synaptic vesicle exocytosis and mitotic cell cycle arrest in response to pheromone are a component of max number of behaviors or biological processes
establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification synaptic vesicle exocytosis mitotic cell cycle arrest in response to pheromone
action argmax
action union
action find_tuple_counts
relation part of
type biological process
type behavior
action find_tuple_counts
relation part of
type biological process
type biological process
[{'concept': 'biological process'}, 'part of', [{'concept': 'behavior'}, {'concept': 'biological process'}]]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ( MAX ( ?q ) AS ?x ) { SELECT DISTINCT ( COUNT ( ?t ) AS ?q ) ?z WHERE { VALUES ( ?f ) { ( ontology:biological_process ) ( ontology:behavior ) } . ?t rdf:type ?f } GROUP BY ?z } } . { SELECT DISTINCT ( COUNT ( ?d ) AS ?j ) ?k WHERE { { ?k property:part_of ?d . ?d rdf:type ontology:biological_process . ?k rdf:type ontology:biological_process } UNION { ?k property:part_of ?d . ?k rdf:type ontology:biological_process . ?d rdf:type ontology:behavior } } GROUP BY ?k } . FILTER ( ?j = ?x ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q21100636 Q21104832
P682
Q181394
USER
Which nutrients are involved in the biologicail process synaptic vesicle exocytosis or toxin transport ?
OR((c(Q181394),P682,Q21104832), (c(Q181394),P682,Q21100636))
action filter_type
action union
action find_reverse
entity Q21104832
relation P682
action find_reverse
entity Q21100636
relation P682
type Q181394
{'OR': [[{'concept': 'Q181394'}, 'P682', 'Q21104832'], [{'concept': 'Q181394'}, 'P682', 'Q21100636']]}
SELECT DISTINCT ?v WHERE { { VALUES ( ?o ) { ( resource:Q21104832 ) ( resource:Q21100636 ) } . ?v property:P682 ?o } . ?v rdf:type ontology:Q181394 }
toxin transport synaptic vesicle exocytosis
action filter_type
action union
action find_reverse
entity synaptic vesicle exocytosis
relation biological process
action find_reverse
entity toxin transport
relation biological process
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'biological process', 'synaptic vesicle exocytosis'], [{'concept': 'nutrient'}, 'biological process', 'toxin transport']]}
SELECT DISTINCT ?v WHERE { { VALUES ( ?o ) { ( resource:synaptic_vesicle_exocytosis ) ( resource:toxin_transport ) } . ?v property:biological_process ?o } . ?v rdf:type ontology:nutrient }
[]
nutrient
Q21494253 Q21992323 Q21100639 Q21988693 Q21111684 Q21101898 Q21495416 Q21989612 Q21106430 Q21108957
SYSTEM
Some of them are Complexin-2, T-complex protein 1 subunit eta, Programmed cell death 1 ligand 1, Myotubularin-related protein 12, SNARE-associated protein Snapin, AT-rich interactive domain-containing protein 1A, BCL2/adenovirus E1B 19 kDa protein-interacting protein 3, Synaptotagmin-10, E3 ubiquitin-protein ligase TRIM9, T-complex protein 1 subunit alpha
Q21142361 Q21123637 Q21990096 Q21116494 Q21120083 Q21126786 Q21108957 Q21989990 Q21988693 Q21988978 Q21122938 Q21115695 Q21120015 Q21982426 Q21986312 Q21496233 Q21147394 Q21991652 Q21494846 Q21104718 Q21114261 Q21495922 Q21111964 Q21115686 Q21106430 Q21115567 Q21112243 Q21100639 Q21113825 Q21111684 Q21130986 Q21125803 Q21115708 Q21106815 Q21632562 Q21130854 Q21113668 Q21495560 Q21111894 Q21111892 Q21122979 Q21105409 Q21135211 Q14901975 Q21132095 Q21117292 Q21156571 Q21498168 Q21991325 Q21495416 Q21201076 Q21990594 Q21120756 Q21988656 Q21499016 Q21114530 Q21992332 Q21497067 Q21135694 Q21989978 Q21991330 Q21494073 Q21126821 Q21173856 Q21101898 Q5049052 Q21130005 Q21990432 Q21992323 Q21983339 Q21992326 Q21992327 Q21992324 Q21992325 Q21109076 Q21984430 Q21990176 Q21498129 Q21123931 Q311568 Q21989286 Q21100891 Q21985954 Q21173244 Q21992317 Q21992316 Q21990102 Q21985312 Q21494263 Q3943776 Q21137106 Q21498131 Q21983618 Q21104836 Q21984486 Q21989985 Q21989612 Q22680289 Q21171815 Q21983456 Q21498720 Q21116933 Q21110434 Q21493863 Q21139514 Q21143478 Q21108063 Q21125300 Q21125301 Q21125306 Q21494253 Q21494252 Q21499330 Q21495229 Q21496914 Q21981721 Q21491072
OR((c(Q181394),P682,Q21104832), (c(Q181394),P682,Q21100636))
action filter_type
action union
action find_reverse
entity Q21104832
relation P682
action find_reverse
entity Q21100636
relation P682
type Q181394
[ANSWERS] are involved in the biologicail process synaptic vesicle exocytosis or toxin transport
{'OR': [[{'concept': 'Q181394'}, 'P682', 'Q21104832'], [{'concept': 'Q181394'}, 'P682', 'Q21100636']]}
SELECT DISTINCT ?v WHERE { { VALUES ( ?o ) { ( resource:Q21104832 ) ( resource:Q21100636 ) } . ?v property:P682 ?o } . ?v rdf:type ontology:Q181394 }
BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 T-complex protein 1 subunit delta Synaptotagmin-1 78 kDa glucose-regulated protein Myotubularin-related protein 12 P2X purinoceptor 7 T-complex protein 1 subunit alpha Ras-related protein Rab-28 Myotubularin-related protein 12 V-type proton ATPase 116 kDa subunit a isoform 1 V-type proton ATPase 116 kDa subunit a isoform 1 Complexin-2 Meprin A subunit beta SNARE-associated protein Snapin Receptor-type tyrosine-protein phosphatase gamma Vesicle-associated membrane protein 2 Calcium-dependent secretion activator 2 Syntaxin-4 Anthrax toxin receptor 2 Solute carrier family 22 member 3 Double C2-like domain-containing protein alpha Low-density lipoprotein receptor-related protein 6 Coatomer subunit zeta-1 Complexin-1 E3 ubiquitin-protein ligase TRIM9 CREB-regulated transcription coactivator 2 DnaJ homolog subfamily C member 17 Programmed cell death 1 ligand 1 Adhesion G protein-coupled receptor L1 SNARE-associated protein Snapin Otoferlin Protein piccolo Complexin-3 Sec1 family domain-containing protein 1 cytotoxicity-associated immunodominant antigen    HP0547 DnaJ homolog subfamily A member 1 ATP-binding cassette sub-family G member 1 78 kDa glucose-regulated protein Calcium-dependent secretion activator 1 Calcium-dependent secretion activator 2 T-complex protein 1 subunit gamma T-complex protein 1 subunit beta Ras-related protein Rab-28 Caspase-1 Low-density lipoprotein receptor-related protein 6 Coatomer subunit beta' Vesicle-associated membrane protein 2 CREB-regulated transcription coactivator 2 E3 ubiquitin-protein ligase TRIM9 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 Dynamin-1 Solute carrier family 22 member 3 Large neutral amino acids transporter small subunit 2 Meprin A subunit beta Calcium-dependent secretion activator 2 Neuropilin-1 T-complex protein 1 subunit zeta-2 Bcl-2-binding component 3 T-complex protein 1 subunit eta Ras-related protein Rab-3A Activating signal cointegrator 1 Programmed cell death 1 ligand 1 Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma Activating signal cointegrator 1 AT-rich interactive domain-containing protein 1A Caspase-1 Anthrax toxin receptor 2 P2X purinoceptor 7 T-complex protein 1 subunit eta Histamine H2 receptor T-complex protein 1 subunit epsilon T-complex protein 1 subunit zeta T-complex protein 1 subunit beta T-complex protein 1 subunit delta Sodium-dependent phosphate transport protein 4 DnaJ homolog subfamily C member 17 Vacuolar protein sorting-associated protein 11 homolog Coatomer subunit beta' Synaptotagmin-10 Histamine H2 receptor Vesicle-associated membrane protein 4 CADPS protein Otoferlin DnaJ homolog subfamily C member 5 T-complex protein 1 subunit theta T-complex protein 1 subunit alpha Sec1 family domain-containing protein 1 Neuropilin-1 Complexin-3 Synaptosomal-associated protein 25 H.sapiens ras-related Hrab3A protein Coatomer subunit zeta-1 Calcium-dependent secretion activator 1 Regulating synaptic membrane exocytosis protein 1 T-complex protein 1 subunit gamma Ras-related protein Rab-43 Synaptotagmin-10 Ras-related protein Rab-43 Synaptotagmin-1 Adhesion G protein-coupled receptor L1 Large neutral amino acids transporter small subunit 2 Cyclin-dependent-like kinase 5 ADP-ribosylation factor-binding protein GGA1 Dynamin-1 Adhesion G protein-coupled receptor L1 Ca++-dependent secretion activator 2 isoform E Ras-related protein Rab-3A T-complex protein 1 subunit epsilon T-complex protein 1 subunit theta T-complex protein 1 subunit zeta-2 Complexin-2 Complexin-1 ADP-ribosylation factor-binding protein GGA1 DnaJ homolog subfamily A member 1 AT-rich interactive domain-containing protein 1A Double C2-like domain-containing protein alpha ATP-binding cassette sub-family G member 1
Complexin-2, T-complex protein 1 subunit eta, Programmed cell death 1 ligand 1, Myotubularin-related protein 12, SNARE-associated protein Snapin, AT-rich interactive domain-containing protein 1A, BCL2/adenovirus E1B 19 kDa protein-interacting protein 3, Synaptotagmin-10, E3 ubiquitin-protein ligase TRIM9 and T-complex protein 1 subunit alpha are involved in the biologicail process synaptic vesicle exocytosis or toxin transport
Complexin-2 T-complex protein 1 subunit eta Programmed cell death 1 ligand 1 Myotubularin-related protein 12 SNARE-associated protein Snapin AT-rich interactive domain-containing protein 1A BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 Synaptotagmin-10 E3 ubiquitin-protein ligase TRIM9 T-complex protein 1 subunit alpha
action filter_type
action union
action find_reverse
entity synaptic vesicle exocytosis
relation biological process
action find_reverse
entity toxin transport
relation biological process
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'biological process', 'synaptic vesicle exocytosis'], [{'concept': 'nutrient'}, 'biological process', 'toxin transport']]}
SELECT DISTINCT ?v WHERE { { VALUES ( ?o ) { ( resource:synaptic_vesicle_exocytosis ) ( resource:toxin_transport ) } . ?v property:biological_process ?o } . ?v rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q8386
USER
Which nutrients do atleast 26 nutrients and drugs collaborate with ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 26
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?l ) ?t WHERE { { ?m property:P129 ?t . ?t rdf:type ontology:Q181394 . ?m rdf:type ontology:Q181394 } UNION { ?m property:P129 ?t . ?t rdf:type ontology:Q181394 . ?m rdf:type ontology:Q8386 } } GROUP BY ?t } . FILTER ( ?l >= 26 ) }
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 26
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?l ) ?t WHERE { { ?m property:physically_interacts_with ?t . ?t rdf:type ontology:nutrient . ?m rdf:type ontology:nutrient } UNION { ?m property:physically_interacts_with ?t . ?t rdf:type ontology:nutrient . ?m rdf:type ontology:drug } } GROUP BY ?t } . FILTER ( ?l >= 26 ) }
[]
nutrient nutrient drug
Q2034004 Q1949517 Q21108118
SYSTEM
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A, 5-hydroxytryptamine receptor 2C
Q7050954 Q309513 Q287961 Q410142 Q21110872 Q21108118 Q21115046 Q21115043 Q1949517 Q2034004
(c(Q181394)|c(Q8386),P129,c(Q181394))
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 26
Atleast 26 nutrients and drugs collaborate with [ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?l ) ?t WHERE { { ?m property:P129 ?t . ?t rdf:type ontology:Q181394 . ?m rdf:type ontology:Q181394 } UNION { ?m property:P129 ?t . ?t rdf:type ontology:Q181394 . ?m rdf:type ontology:Q8386 } } GROUP BY ?t } . FILTER ( ?l >= 26 ) }
Sodium-dependent noradrenaline transporter Histamine H1 receptor Beta-2 adrenergic receptor Sodium-dependent serotonin transporter D(3) dopamine receptor 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A D(2) dopamine receptor
Atleast 26 nutrients and drugs collaborate with D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A and 5-hydroxytryptamine receptor 2C
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 2C
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 26
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?l ) ?t WHERE { { ?m property:physically_interacts_with ?t . ?t rdf:type ontology:nutrient . ?m rdf:type ontology:nutrient } UNION { ?m property:physically_interacts_with ?t . ?t rdf:type ontology:nutrient . ?m rdf:type ontology:drug } } GROUP BY ?t } . FILTER ( ?l >= 26 ) }
[]