Simple Question (Direct)
Simple Question
Q22301533
P703
Q16521
USER
Where is MATE family transport protein    Cj0560 found ?
(Q22301533,P703,c(Q16521))
action filter_type
action find
entity Q22301533
relation P703
type Q16521
['Q22301533', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:Q16521 . resource:Q22301533 property:P703 ?l }
MATE family transport protein    Cj0560
action filter_type
action find
entity MATE family transport protein    Cj0560
relation found in taxon
type taxon
['MATE family transport protein    Cj0560', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:taxon . resource:MATE_family_transport_protein____Cj0560 property:found_in_taxon ?l }
[]
taxon
Q21065230
SYSTEM
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Q21065230
(Q22301533,P703,c(Q16521))
action filter_type
action find
entity Q22301533
relation P703
type Q16521
MATE family transport protein Cj0560 is found in [ANSWER]
['Q22301533', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:Q16521 . resource:Q22301533 property:P703 ?l }
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
MATE family transport protein Cj0560 is found in Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
action filter_type
action find
entity MATE family transport protein    Cj0560
relation found in taxon
type taxon
['MATE family transport protein    Cj0560', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:taxon . resource:MATE_family_transport_protein____Cj0560 property:found_in_taxon ?l }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q22301533
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q21065230)
action filter_type
action find_reverse
entity Q22301533
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21065230']
SELECT DISTINCT ?c WHERE { ?c property:P688 resource:Q22301533 . ?c rdf:type ontology:Q863908 }
MATE family transport protein    Cj0560
action filter_type
action find_reverse
entity MATE family transport protein    Cj0560
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819']
SELECT DISTINCT ?c WHERE { ?c property:encodes resource:MATE_family_transport_protein____Cj0560 . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q22297563
SYSTEM
MATE family transport protein    Cj0560
Q22297563
(c(Q863908),P688,Q21065230)
action filter_type
action find_reverse
entity Q22301533
relation P688
type Q863908
MATE family transport protein Cj0560 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q21065230']
SELECT DISTINCT ?c WHERE { ?c property:P688 resource:Q22301533 . ?c rdf:type ontology:Q863908 }
MATE family transport protein    Cj0560
MATE family transport protein Cj0560 encodes that nutrient
MATE family transport protein    Cj0560
action filter_type
action find_reverse
entity MATE family transport protein    Cj0560
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819']
SELECT DISTINCT ?c WHERE { ?c property:encodes resource:MATE_family_transport_protein____Cj0560 . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22301533
P702
Q863908
USER
Which gene encodes MATE family transport protein    Cj0560 ?
(Q22301533,P702,c(Q863908))
action filter_type
action find
entity Q22301533
relation P702
type Q863908
['Q22301533', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q22301533 property:P702 ?a . ?a rdf:type ontology:Q863908 }
MATE family transport protein    Cj0560
action filter_type
action find
entity MATE family transport protein    Cj0560
relation encoded by
type nucleic acid sequence
['MATE family transport protein    Cj0560', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:MATE_family_transport_protein____Cj0560 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q22297563
SYSTEM
MATE family transport protein    Cj0560
Q22297563
(Q22301533,P702,c(Q863908))
action filter_type
action find
entity Q22301533
relation P702
type Q863908
Protein MATE family transport protein Cj0560 encodes MATE family transport protein Cj0560
['Q22301533', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q22301533 property:P702 ?a . ?a rdf:type ontology:Q863908 }
MATE family transport protein    Cj0560
Protein MATE family transport protein Cj0560 encodes MATE family transport protein Cj0560
MATE family transport protein    Cj0560
action filter_type
action find
entity MATE family transport protein    Cj0560
relation encoded by
type nucleic acid sequence
['MATE family transport protein    Cj0560', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:MATE_family_transport_protein____Cj0560 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22301533
P681
Q15989253
USER
Which is the part that is a component of MATE family transport protein    Cj0560 ?
(Q22301533,P681,c(Q15989253))
action filter_type
action find
entity Q22301533
relation P681
type Q15989253
['Q22301533', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q22301533 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
MATE family transport protein    Cj0560
action filter_type
action find
entity MATE family transport protein    Cj0560
relation cell component
type part
['MATE family transport protein    Cj0560', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:MATE_family_transport_protein____Cj0560 property:cell_component ?s . ?s rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q22301533,P681,c(Q15989253))
action filter_type
action find
entity Q22301533
relation P681
type Q15989253
[ANSWER] is the part that is a component of MATE family transport protein Cj0560
['Q22301533', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q22301533 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
membrane
Membrane is the part that is a component of MATE family transport protein Cj0560
membrane
action filter_type
action find
entity MATE family transport protein    Cj0560
relation cell component
type part
['MATE family transport protein    Cj0560', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:MATE_family_transport_protein____Cj0560 property:cell_component ?s . ?s rdf:type ontology:part }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Single entity type|Indirect
P361
Q15989253 Q5058355
USER
How many parts are around the same number of cellular components a component of as that part ?
(c(Q5058355),P361,c(Q15989253))
action count
action approx
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
action count
action filter_type
action find
entity Q14349455
relation P361
type Q15989253
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?a ) WHERE { { SELECT DISTINCT ( COUNT ( ?i ) AS ?u ) WHERE { resource:Q14349455 property:P361 ?i . ?i rdf:type ontology:Q15989253 } } . FILTER ( ?e = ?u ) . { SELECT DISTINCT ?q ( COUNT ( ?o ) AS ?e ) WHERE { ?o property:P361 ?q . ?q rdf:type ontology:Q15989253 . ?o rdf:type ontology:Q5058355 } GROUP BY ?q } }
action count
action approx
action find_reverse_tuple_counts
relation part of
type part
type cellular component
action count
action filter_type
action find
entity membrane
relation part of
type part
[{'concept': 'cellular component'}, 'part of', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?a ) WHERE { { SELECT DISTINCT ( COUNT ( ?i ) AS ?u ) WHERE { resource:membrane property:part_of ?i . ?i rdf:type ontology:part } } . FILTER ( ?e = ?u ) . { SELECT DISTINCT ?q ( COUNT ( ?o ) AS ?e ) WHERE { ?o property:part_of ?q . ?q rdf:type ontology:part . ?o rdf:type ontology:cellular_component } GROUP BY ?q } }
[]
part cellular component
SYSTEM
2
Q14349455 Q45948
(c(Q5058355),P361,c(Q15989253))
action count
action approx
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
action count
action filter_type
action find
entity Q14349455
relation P361
type Q15989253
[ANSWER]
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?a ) WHERE { { SELECT DISTINCT ( COUNT ( ?i ) AS ?u ) WHERE { resource:Q14349455 property:P361 ?i . ?i rdf:type ontology:Q15989253 } } . FILTER ( ?e = ?u ) . { SELECT DISTINCT ?q ( COUNT ( ?o ) AS ?e ) WHERE { ?o property:P361 ?q . ?q rdf:type ontology:Q15989253 . ?o rdf:type ontology:Q5058355 } GROUP BY ?q } }
membrane organelle
2
action count
action approx
action find_reverse_tuple_counts
relation part of
type part
type cellular component
action count
action filter_type
action find
entity membrane
relation part of
type part
[{'concept': 'cellular component'}, 'part of', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?a ) WHERE { { SELECT DISTINCT ( COUNT ( ?i ) AS ?u ) WHERE { resource:membrane property:part_of ?i . ?i rdf:type ontology:part } } . FILTER ( ?e = ?u ) . { SELECT DISTINCT ?q ( COUNT ( ?o ) AS ?e ) WHERE { ?o property:part_of ?q . ?q rdf:type ontology:part . ?o rdf:type ontology:cellular_component } GROUP BY ?q } }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q21172407
Q15989253
USER
And also tell me about ABC transporter ATP-binding protein    CTL0385?
(Q21172407,P682,c(Q15989253))
action count
action filter_type
action find
entity Q21172407
relation P682
type Q15989253
['Q21172407', 'P682', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?g ) WHERE { resource:Q21172407 property:P682 ?x . ?x rdf:type ontology:Q15989253 }
ABC transporter ATP-binding protein    CTL0385
action count
action filter_type
action find
entity ABC transporter ATP-binding protein    CTL0385
relation biological process
type part
['ABC transporter ATP-binding protein    CTL0385', 'biological process', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?g ) WHERE { resource:ABC_transporter_ATP-binding_protein____CTL0385 property:biological_process ?x . ?x rdf:type ontology:part }
[]
part
SYSTEM
1
(Q21172407,P682,c(Q15989253))
action count
action filter_type
action find
entity Q21172407
relation P682
type Q15989253
[ANSWER]
['Q21172407', 'P682', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?g ) WHERE { resource:Q21172407 property:P682 ?x . ?x rdf:type ontology:Q15989253 }
1
action count
action filter_type
action find
entity ABC transporter ATP-binding protein    CTL0385
relation biological process
type part
['ABC transporter ATP-binding protein    CTL0385', 'biological process', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?x ) AS ?g ) WHERE { resource:ABC_transporter_ATP-binding_protein____CTL0385 property:biological_process ?x . ?x rdf:type ontology:part }
[]