Simple Question (Direct)
Simple Question
Q24272586
P702
Q863908
USER
What is the gene that encodes bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870 ?
(Q24272586,P702,c(Q863908))
action filter_type
action find
entity Q24272586
relation P702
type Q863908
['Q24272586', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?y WHERE { resource:Q24272586 property:P702 ?y . ?y rdf:type ontology:Q863908 }
bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
action filter_type
action find
entity bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
relation encoded by
type nucleic acid sequence
['bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?y WHERE { resource:bifunctional_aspartate_kinase_II/homoserine_dehydrogenase_II____KPHS_00870 property:encoded_by ?y . ?y rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23134939
SYSTEM
bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
Q23134939
(Q24272586,P702,c(Q863908))
action filter_type
action find
entity Q24272586
relation P702
type Q863908
The gene that encodes bifunctional aspartate kinase II / homoserine dehydrogenase II KPHS_00870 is also bifunctional aspartate kinase II/homoserine dehydrogenase II KPHS 00870
['Q24272586', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?y WHERE { resource:Q24272586 property:P702 ?y . ?y rdf:type ontology:Q863908 }
bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
The gene that encodes bifunctional aspartate kinase II / homoserine dehydrogenase II KPHS_00870 is also bifunctional aspartate kinase II/homoserine dehydrogenase II KPHS 00870
bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
action filter_type
action find
entity bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
relation encoded by
type nucleic acid sequence
['bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?y WHERE { resource:bifunctional_aspartate_kinase_II/homoserine_dehydrogenase_II____KPHS_00870 property:encoded_by ?y . ?y rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24272586
P682
Q1057
USER
What are the metabolic processes that that nutrient are involved in ?
(Q23134939,P682,c(Q1057))
action filter_type
action find
entity Q24272586
relation P682
type Q1057
['Q23134939', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?c WHERE { resource:Q24272586 property:P682 ?c . ?c rdf:type ontology:Q1057 }
bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
action filter_type
action find
entity bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
relation biological process
type metabolic process
['bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?c WHERE { resource:bifunctional_aspartate_kinase_II/homoserine_dehydrogenase_II____KPHS_00870 property:biological_process ?c . ?c rdf:type ontology:metabolic_process }
[]
metabolic process
Q14859896 Q14349764
SYSTEM
cellular amino acid metabolic process, oxidation-reduction process
Q14859896 Q14349764
(Q23134939,P682,c(Q1057))
action filter_type
action find
entity Q24272586
relation P682
type Q1057
The metabolic processes that nutrient are involved in are the [ANSWERS]
['Q23134939', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?c WHERE { resource:Q24272586 property:P682 ?c . ?c rdf:type ontology:Q1057 }
cellular amino acid metabolic process oxidation-reduction process
The metabolic processes that nutrient are involved in are the cellular amino acid metabolic process and oxidation-reduction process
cellular amino acid metabolic process oxidation-reduction process
action filter_type
action find
entity bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870
relation biological process
type metabolic process
['bifunctional aspartate kinase II/homoserine dehydrogenase II    KPHS_00870', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?c WHERE { resource:bifunctional_aspartate_kinase_II/homoserine_dehydrogenase_II____KPHS_00870 property:biological_process ?c . ?c rdf:type ontology:metabolic_process }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q23500931
P682
Q181394
USER
Are F0F1 ATP synthase subunit beta    EF2608 involved in those metabolic processes ?
(Q23500931,P682,Q14859896) (Q23500931,P682,Q14349764)
action is_in
entity prev_answer
action find
entity Q23500931
relation P682
['Q23500931', 'P682', 'Q14859896'] ['Q23500931', 'P682', 'Q14349764']
ASK WHERE { resource:Q23500931 property:P682 ?z . VALUES ( ?z ) { ( resource:Q14859896 ) ( resource:Q14349764 ) } }
F0F1 ATP synthase subunit beta    EF2608
action is_in
entity prev_answer
action find
entity F0F1 ATP synthase subunit beta    EF2608
relation biological process
['F0F1 ATP synthase subunit beta    EF2608', 'biological process', 'cellular amino acid metabolic process'] ['F0F1 ATP synthase subunit beta    EF2608', 'biological process', 'oxidation-reduction process']
ASK WHERE { resource:F0F1_ATP_synthase_subunit_beta____EF2608 property:biological_process ?z . VALUES ( ?z ) { ( resource:cellular_amino_acid_metabolic_process ) ( resource:oxidation-reduction_process ) } }
[]
nutrient
SYSTEM
NO
(Q23500931,P682,Q14859896) (Q23500931,P682,Q14349764)
action is_in
entity prev_answer
action find
entity Q23500931
relation P682
[ANSWER]
['Q23500931', 'P682', 'Q14859896'] ['Q23500931', 'P682', 'Q14349764']
ASK WHERE { resource:Q23500931 property:P682 ?z . VALUES ( ?z ) { ( resource:Q14859896 ) ( resource:Q14349764 ) } }
No
action is_in
entity prev_answer
action find
entity F0F1 ATP synthase subunit beta    EF2608
relation biological process
['F0F1 ATP synthase subunit beta    EF2608', 'biological process', 'cellular amino acid metabolic process'] ['F0F1 ATP synthase subunit beta    EF2608', 'biological process', 'oxidation-reduction process']
ASK WHERE { resource:F0F1_ATP_synthase_subunit_beta____EF2608 property:biological_process ?z . VALUES ( ?z ) { ( resource:cellular_amino_acid_metabolic_process ) ( resource:oxidation-reduction_process ) } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q21156663
P129
Q79529 Q8386 Q181394
USER
Which nutrients can interact with less number of chemical substances and drugs than Mitogen-activated protein kinase 11 ?
(c(Q181394),P129,c(Q79529)|c(Q8386))
action less
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find
entity Q21156663
relation P129
type Q79529
type Q8386
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( COUNT ( ?e ) AS ?b ) WHERE { resource:Q21156663 property:P129 ?e . { { ?e rdf:type ontology:Q79529 } UNION { ?e rdf:type ontology:Q8386 } } } } . FILTER ( ?y < ?b ) . { SELECT DISTINCT ( COUNT ( ?d ) AS ?y ) ?o WHERE { ?d rdf:type ?z . VALUES ( ?z ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } } GROUP BY ?o } }
Mitogen-activated protein kinase 11
action less
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find
entity Mitogen-activated protein kinase 11
relation physically interacts with
type chemical substance
type drug
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'drug'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( COUNT ( ?e ) AS ?b ) WHERE { resource:Mitogen-activated_protein_kinase_11 property:physically_interacts_with ?e . { { ?e rdf:type ontology:chemical_substance } UNION { ?e rdf:type ontology:drug } } } } . FILTER ( ?y < ?b ) . { SELECT DISTINCT ( COUNT ( ?d ) AS ?y ) ?o WHERE { ?d rdf:type ?z . VALUES ( ?z ) { ( ontology:drug ) ( ontology:chemical_substance ) } } GROUP BY ?o } }
[]
chemical substance drug nutrient
Q15324125 Q1407929 Q13561329
SYSTEM
Transient receptor potential cation channel subfamily V member 4, Cytochrome P450 1A1, Reelin
Q21494718 Q21108693 Q13561329 Q21110295 Q1407929 Q21173169 Q21113552 Q21496578 Q21496575 Q21496576 Q15324125 Q21110296 Q21154430 Q3931282 Q21139123 Q21496918 Q5014947 Q21172884 Q21172886 Q315860 Q21495791
(c(Q181394),P129,c(Q79529)|c(Q8386))
action less
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find
entity Q21156663
relation P129
type Q79529
type Q8386
[ANSWERS] can interact with less number of chemical substances and drugs than Mitogen-activated protein kinase 11
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( COUNT ( ?e ) AS ?b ) WHERE { resource:Q21156663 property:P129 ?e . { { ?e rdf:type ontology:Q79529 } UNION { ?e rdf:type ontology:Q8386 } } } } . FILTER ( ?y < ?b ) . { SELECT DISTINCT ( COUNT ( ?d ) AS ?y ) ?o WHERE { ?d rdf:type ?z . VALUES ( ?z ) { ( ontology:Q8386 ) ( ontology:Q79529 ) } } GROUP BY ?o } }
Lysophosphatidic acid receptor 2 G-protein coupled receptor 87 Reelin Galanin receptor type 2 Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 ATP-sensitive inward rectifier potassium channel 14 Lysophosphatidic acid receptor 3 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Transient receptor potential cation channel subfamily V member 4 Galanin receptor type 3 Lysophosphatidic acid receptor 4 Calcitonin receptor Lysophosphatidic acid receptor 2 Lysophosphatidic acid receptor 1 Cytochrome P450 1B1 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Calcitonin Metabotropic glutamate receptor 5
Transient receptor potential cation channel subfamily V member 4, Cytochrome P450 1A1 and Reelin can interact with less number of chemical substances and drugs than Mitogen-activated protein kinase 11
Transient receptor potential cation channel subfamily V member 4 Cytochrome P450 1A1 Reelin
action less
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find
entity Mitogen-activated protein kinase 11
relation physically interacts with
type chemical substance
type drug
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'drug'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( COUNT ( ?e ) AS ?b ) WHERE { resource:Mitogen-activated_protein_kinase_11 property:physically_interacts_with ?e . { { ?e rdf:type ontology:chemical_substance } UNION { ?e rdf:type ontology:drug } } } } . FILTER ( ?y < ?b ) . { SELECT DISTINCT ( COUNT ( ?d ) AS ?y ) ?o WHERE { ?d rdf:type ?z . VALUES ( ?z ) { ( ontology:drug ) ( ontology:chemical_substance ) } } GROUP BY ?o } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type|Incomplete
Q7169504
P129
Q79529 Q8386 Q181394
USER
And what about Peroxisome proliferator-activated receptor delta?
(c(Q181394),P129,c(Q79529)|c(Q8386))
action less
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find
entity Q7169504
relation P129
type Q79529
type Q8386
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ( COUNT ( ?n ) AS ?e ) ?w WHERE { VALUES ( ?b ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } . ?n rdf:type ?b } GROUP BY ?w } . FILTER ( ?e < ?d ) . { SELECT DISTINCT ( COUNT ( ?f ) AS ?d ) WHERE { resource:Q7169504 property:P129 ?f . { ?f rdf:type ?a . VALUES ( ?a ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } } } } }
Peroxisome proliferator-activated receptor delta
action less
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find
entity Peroxisome proliferator-activated receptor delta
relation physically interacts with
type chemical substance
type drug
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'drug'}]]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ( COUNT ( ?n ) AS ?e ) ?w WHERE { VALUES ( ?b ) { ( ontology:chemical_substance ) ( ontology:drug ) } . ?n rdf:type ?b } GROUP BY ?w } . FILTER ( ?e < ?d ) . { SELECT DISTINCT ( COUNT ( ?f ) AS ?d ) WHERE { resource:Peroxisome_proliferator-activated_receptor_delta property:physically_interacts_with ?f . { ?f rdf:type ?a . VALUES ( ?a ) { ( ontology:chemical_substance ) ( ontology:drug ) } } } } }
[]
chemical substance drug nutrient
Q425201 Q21113719 Q5514576
SYSTEM
Apoptosis regulator Bcl-2, NAD-dependent protein deacetylase sirtuin-1, Glycogen synthase kinase-3 beta
Q21135479 Q21987720 Q5635781 Q21494718 Q21115210 Q21115219 Q21119831 Q21119830 Q4217286 Q21108693 Q21988043 Q21127094 Q13561329 Q21985448 Q21119231 Q21115284 Q21987850 Q21172741 Q420930 Q21110295 Q21111688 Q1407929 Q21173169 Q14908176 Q21118791 Q21108135 Q21111175 Q21125451 Q21113312 Q21113314 Q21113317 Q409166 Q1947065 Q15335226 Q21126314 Q14864142 Q4042017 Q21496155 Q6590338 Q7073181 Q4216080 Q21156475 Q7317662 Q4048886 Q22675842 Q14911986 Q21100441 Q7202245 Q21113552 Q21137668 Q21114547 Q21100658 Q1552797 Q14865158 Q21135205 Q21110488 Q21117208 Q21102756 Q906403 Q3609382 Q21113671 Q21981115 Q401536 Q420604 Q258915 Q21126218 Q21130085 Q21135448 Q21135449 Q21173374 Q21108357 Q21126214 Q21156663 Q21118967 Q21108408 Q21118678 Q21984552 Q21984557 Q7861688 Q21118909 Q7923221 Q21106653 Q21118293 Q21130016 Q21136517 Q21111689 Q908221 Q21496578 Q21496575 Q21496576 Q21109253 Q21100773 Q21100774 Q21988044 Q21107535 Q2042529 Q21114341 Q21985924 Q21988816 Q14905576 Q21113326 Q14905270 Q5201199 Q21984063 Q21135975 Q21122125 Q4812911 Q21103089 Q21172213 Q14914580 Q4459747 Q21102129 Q21130042 Q5198252 Q21109744 Q21123723 Q5198256 Q21124458 Q21107884 Q21111742 Q21123239 Q15324125 Q7275807 Q2640417 Q21125231 Q21110296 Q21100472 Q21123725 Q21123722 Q21107891 Q21155668 Q1147372 Q21110467 Q5514576 Q7671473 Q22677568 Q21119824 Q21980258 Q21119826 Q2385013 Q5419640 Q21118920 Q21494502 Q22680153 Q21114166 Q7671499 Q14913392 Q21116513 Q21104645 Q21499436 Q21115906 Q408853 Q21119851 Q21130460 Q21102588 Q5611730 Q21097266 Q21118785 Q21154430 Q21173746 Q21125466 Q412483 Q420766 Q21496383 Q21113719 Q1493174 Q11071131 Q21139471 Q21497887 Q5514257 Q21110304 Q3459294 Q21114338 Q21119672 Q21987843 Q21202200 Q21132140 Q21118732 Q21110396 Q21126773 Q419999 Q21135949 Q21096262 Q21105660 Q21991514 Q21135943 Q21135945 Q21991512 Q21117235 Q21108844 Q21981993 Q21171763 Q4650061 Q21119704 Q21112691 Q15322943 Q21174687 Q21499097 Q21105060 Q21114807 Q21125240 Q21208052 Q21987569 Q21173156 Q21124061 Q21118356 Q21117300 Q21126205 Q21108578 Q21120142 Q21110921 Q21106540 Q4036865 Q21111184 Q21983261 Q21111182 Q21111181 Q21102300 Q3931282 Q21139123 Q14891582 Q21496918 Q21106795 Q21117407 Q21113926 Q21110752 Q408305 Q21097237 Q21120955 Q21114574 Q21112525 Q14911895 Q3721138 Q7251483 Q21113330 Q5419638 Q21113337 Q21156191 Q21108487 Q21110901 Q21104817 Q14914570 Q14905748 Q21135903 Q21103337 Q21103323 Q21102136 Q21145932 Q21173215 Q21123245 Q5014947 Q21123246 Q5512833 Q21132248 Q423572 Q422579 Q21499210 Q21100464 Q15323346 Q21112674 Q21988035 Q21105636 Q21126242 Q21126786 Q21115989 Q5572421 Q21107443 Q21497124 Q21123241 Q21118919 Q21497128 Q5198254 Q21119694 Q7136149 Q21111879 Q21125249 Q21988026 Q21988024 Q7671460 Q7671461 Q21173504 Q12746382 Q21106693 Q21119848 Q21497155 Q5464652 Q7671464 Q356093 Q21119847 Q21121466 Q21110933 Q6714411 Q22677167 Q7118491 Q13566123 Q21979519 Q21135411 Q21120698 Q21113274 Q7120326 Q21113278 Q21113504 Q21989670 Q6881891 Q21497874 Q21127300 Q2083074 Q21111553 Q21108161 Q21124401 Q4897285 Q21111495 Q21123752 Q21172884 Q21172886 Q21122109 Q21140676 Q1436420 Q21121716 Q21130508 Q21132789 Q21123216 Q21106691 Q6981557 Q22679008 Q5198250 Q21113831 Q14914198 Q4377404 Q21119843 Q21116933 Q315860 Q21119827 Q5014193 Q21172286 Q21114819 Q21120144 Q6714959 Q22678664 Q5446457 Q5446456 Q21106737 Q14914104 Q3271142 Q21992684 Q21119816 Q10988613 Q21102593 Q5014192 Q21109026 Q21102123 Q21108517 Q565672 Q21154413 Q21113832 Q5611755 Q21123416 Q21111517 Q21988152 Q21121086 Q21982871 Q21984578 Q21113305 Q21133205 Q21119825 Q21102082 Q21984577 Q21172271 Q21131101 Q5014958 Q5014957 Q415718 Q7455513 Q21119591 Q21114857 Q21100450 Q21100324 Q21982203 Q21132247 Q21113540 Q423561 Q21120051 Q21106448 Q21987287 Q21115996 Q21118578 Q21115992 Q21109157 Q21115998 Q21201618 Q21118677 Q21988427 Q21991039 Q411791 Q21118884 Q425201 Q9020944 Q21121379 Q21112289 Q21157860 Q7671478 Q15327766 Q21118970 Q21126947 Q21118976 Q416336 Q21113295 Q21113297 Q21173608 Q21136134 Q21129997 Q21107799 Q423628 Q21113349 Q21494464 Q21113510 Q21100810 Q424693 Q21123223 Q288431 Q21107871 Q410434 Q21097216 Q7671497 Q21122509 Q6449560 Q6449562 Q21111520 Q7390572 Q21114955 Q5201183 Q21984381 Q415762 Q6714402 Q21125499 Q21499447 Q21135787 Q15323565 Q571999 Q21495791 Q2005209 Q21100886 Q21115429 Q22683566 Q7002508 Q21121490 Q21121496 Q21123220 Q21113683 Q6981560 Q21118710 Q414401 Q418781 Q21986206
(c(Q181394),P129,c(Q79529)|c(Q8386))
action less
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find
entity Q7169504
relation P129
type Q79529
type Q8386
[ANSWERS]
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ( COUNT ( ?n ) AS ?e ) ?w WHERE { VALUES ( ?b ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } . ?n rdf:type ?b } GROUP BY ?w } . FILTER ( ?e < ?d ) . { SELECT DISTINCT ( COUNT ( ?f ) AS ?d ) WHERE { resource:Q7169504 property:P129 ?f . { ?f rdf:type ?a . VALUES ( ?a ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } } } } }
Sodium channel protein type 8 subunit alpha Mas-related G-protein coupled receptor member D GTPase HRas Lysophosphatidic acid receptor 2 ATP-binding cassette sub-family A member 1 Oxysterols receptor LXR-beta Potassium voltage-gated channel subfamily H member 5 Potassium channel subfamily K member 18 Cathepsin S G-protein coupled receptor 87 Sphingosine 1-phosphate receptor 4 Rho-associated protein kinase 2 Reelin Hydroxycarboxylic acid receptor 1 Tyrosine-protein kinase TXK Activated CDC42 kinase 1 Prostaglandin E2 receptor EP2 subtype G-protein coupled receptor 3 Glutathione reductase, mitochondrial Galanin receptor type 2 B2 bradykinin receptor Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Transient receptor potential cation channel subfamily V member 1 Multidrug resistance-associated protein 5 Neuronal acetylcholine receptor subunit alpha-10 Neuronal acetylcholine receptor subunit alpha-3 Tryptophan 5-hydroxylase 1 Gamma-aminobutyric acid receptor subunit beta-3 Gamma-aminobutyric acid receptor subunit beta-2 Gamma-aminobutyric acid receptor subunit epsilon Prothrombin Voltage-dependent N-type calcium channel subunit alpha-1B D(2) dopamine receptor Sodium channel protein type 1 subunit alpha 3-hydroxy-3-methylglutaryl-coenzyme A reductase GTPase KRas Bromodomain testis-specific protein Metabotropic glutamate receptor 7 2-oxoglutarate receptor 1 72 kDa type IV collagenase Hydroxycarboxylic acid receptor 3 Nuclear receptor subfamily 1 group D member 2 3-oxo-5-alpha-steroid 4-dehydrogenase 2 Rhodopsin kinase Nociceptin receptor Bromodomain-containing protein 4 Platelet-activating factor receptor ATP-sensitive inward rectifier potassium channel 14 Fibroblast growth factor receptor 4 Nitric oxide synthase, inducible Rho-associated protein kinase 1 Heat-stable enterotoxin receptor Potassium voltage-gated channel subfamily KQT member 1 Dihydroorotate dehydrogenase (quinone), mitochondrial Serine/threonine-protein kinase BRSK2 Chymotrypsin-like elastase family member 1 Testis-specific serine/threonine-protein kinase 1 Protein kinase C zeta type Cytochrome P450 11B2, mitochondrial ATP-binding cassette sub-family C member 8 G-protein coupled receptor 6 Tyrosine-protein kinase Blk Phenylalanine-4-hydroxylase Renin Folate transporter 1 Mitogen-activated protein kinase kinase kinase kinase 5 Sodium channel protein type 2 subunit alpha Sodium channel protein type 3 subunit alpha Plasminogen Cystine/glutamate transporter Sphingosine 1-phosphate receptor 1 Mitogen-activated protein kinase 11 G-protein coupled receptor 183 H(+)/Cl(-) exchange transporter 3 Melanocortin receptor 3 Potassium voltage-gated channel subfamily A member 3 Potassium voltage-gated channel subfamily D member 1 Non-receptor tyrosine-protein kinase TYK2 Ovarian cancer G-protein coupled receptor 1 Vesicular acetylcholine transporter Solute carrier family 23 member 1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic Serine/threonine-protein kinase PAK 2 Zinc-activated ligand-gated ion channel B1 bradykinin receptor Indoleamine 2,3-dioxygenase 1 Lysophosphatidic acid receptor 3 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Protein kinase C iota type Chloride transport protein 6 H(+)/Cl(-) exchange transporter 7 Sphingosine 1-phosphate receptor 3 Dual specificity mitogen-activated protein kinase kinase 6 Toll-like receptor 9 Excitatory amino acid transporter 3 P2X purinoceptor 4 Neuropeptide S receptor Thromboxane A2 receptor Gamma-aminobutyric acid receptor subunit gamma-1 Thyrotropin-releasing hormone receptor Cysteinyl leukotriene receptor 2 G-protein coupled receptor family C group 6 member A Multidrug and toxin extrusion protein 1 Serine palmitoyltransferase 3 Serine/threonine-protein kinase ATR Homeodomain-interacting protein kinase 1 Solute carrier family 22 member 1 Short transient receptor potential channel 6 Toll-like receptor 8 Voltage-dependent T-type calcium channel subunit alpha-1H Carbonyl reductase [NADPH] 1 Cyclin-dependent kinase 6 Dual specificity mitogen-activated protein kinase kinase 7 Pannexin-2 Cyclin-dependent kinase 9 Sodium-dependent neutral amino acid transporter B(0)AT2 Potassium voltage-gated channel subfamily B member 1 Complement C1r subcomponent Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' Transient receptor potential cation channel subfamily V member 4 Nuclear receptor ROR-alpha Aldehyde dehydrogenase, mitochondrial Solute carrier organic anion transporter family member 1A2 Galanin receptor type 3 Bromodomain testis-specific protein Pannexin-1 Pannexin-3 Potassium voltage-gated channel subfamily D member 1 Death-associated protein kinase 1 Cyclin-dependent kinase 1 Potassium-transporting ATPase alpha chain 1 Glycogen synthase kinase-3 beta Short transient receptor potential channel 7 Corticotropin-releasing factor receptor 1 G protein-activated inward rectifier potassium channel 2 Short transient receptor potential channel 2 G protein-activated inward rectifier potassium channel 1 Translocator protein Excitatory amino acid transporter 5 P2X purinoceptor 3 G-protein coupled receptor 35 Ornithine decarboxylase Hepatocyte nuclear factor 4-alpha Transient receptor potential cation channel subfamily V member 3 Prostaglandin D2 receptor Serine/threonine-protein kinase 4 Dual specificity mitogen-activated protein kinase kinase 4 Muscarinic acetylcholine receptor M1 Poly [ADP-ribose] polymerase 2 Nitric oxide synthase, endothelial Potassium channel subfamily K member 4 Methionine aminopeptidase 2 Sn1-specific diacylglycerol lipase beta Growth hormone-releasing hormone receptor Angiopoietin-1 receptor Mas-related G-protein coupled receptor member D Lysophosphatidic acid receptor 4 Melanocyte-stimulating hormone receptor Tryptophan 5-hydroxylase 2 Cholesterol side-chain cleavage enzyme, mitochondrial Tyrosine 3-monooxygenase Gastrin/cholecystokinin type B receptor NAD-dependent protein deacetylase sirtuin-1 Vitamin K-dependent gamma-carboxylase Glucagon-like peptide 2 receptor Mitogen-activated protein kinase 10 G protein-activated inward rectifier potassium channel 1 G-protein coupled estrogen receptor 1 Galanin receptor type 1 Sodium channel protein type 5 subunit alpha Excitatory amino acid transporter 2 Phosphatidylinositol 4-kinase type 2-beta Prostaglandin E2 receptor EP4 subtype cAMP-specific 3',5'-cyclic phosphodiesterase 4C Aurora kinase C Maltase-glucoamylase, intestinal Peptidyl-prolyl cis-trans isomerase FKBP1A Putative P2Y purinoceptor 10 Transthyretin Solute carrier family 22 member 11 Sodium leak channel non-selective protein Cyclic nucleotide-gated cation channel alpha-3 Trace amine-associated receptor 3 Solute carrier family 22 member 8 Solute carrier family 22 member 12 Trace amine-associated receptor 5 Nuclear receptor ROR-beta P2X purinoceptor 4 fMet-Leu-Phe receptor G-protein coupled receptor 12 Bile salt export pump Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Beta-adrenergic receptor kinase 2 Short transient receptor potential channel 4 Sodium/bile acid cotransporter Retinoic acid receptor RXR-alpha Aldo-keto reductase family 1 member C3 Lysine-specific demethylase 7A Solute carrier organic anion transporter family member 2A1 Sodium/myo-inositol cotransporter ATP-sensitive inward rectifier potassium channel 15 Bcl-2-like protein 1 Neurotensin receptor type 1 Calcium/calmodulin-dependent protein kinase type II subunit gamma Cytochrome P450 3A5 Sphingosine 1-phosphate receptor 4 Squalene synthase Neuropeptide Y receptor type 1 Uracil nucleotide/cysteinyl leukotriene receptor Geranylgeranyl pyrophosphate synthase Discoidin domain-containing receptor 2 Neuronal acetylcholine receptor subunit alpha-9 Platelet-derived growth factor receptor beta Neuronal acetylcholine receptor subunit alpha-6 Neuronal acetylcholine receptor subunit alpha-2 C-C chemokine receptor type 4 Calcitonin receptor Lysophosphatidic acid receptor 2 Transient receptor potential cation channel subfamily V member 6 Lysophosphatidic acid receptor 1 cAMP-specific 3',5'-cyclic phosphodiesterase 4D Serine/threonine-protein kinase 24 Cholecystokinin receptor type A Cytochrome P450 2J2 Steroid 17-alpha-hydroxylase/17,20 lyase Aromatic-L-amino-acid decarboxylase Nuclear receptor subfamily 2 group C member 2 Gamma-aminobutyric acid receptor subunit beta-1 Serine/threonine-protein kinase N1 Thymidylate synthase Neutrophil elastase Interferon-induced, double-stranded RNA-activated protein kinase Gamma-aminobutyric acid receptor subunit gamma-3 Excitatory amino acid transporter 4 Gamma-aminobutyric acid receptor subunit theta Cyclin-dependent kinase 19 Parathyroid hormone/parathyroid hormone-related peptide receptor Gastrin/cholecystokinin type B receptor Receptor tyrosine-protein kinase erbB-4 Transient receptor potential cation channel subfamily M member 6 Voltage-dependent L-type calcium channel subunit alpha-1C Vasoactive intestinal polypeptide receptor 1 Two pore calcium channel protein 1 Two pore calcium channel protein 2 Retinoic acid receptor RXR-beta Phospholipase D2 Serine/threonine-protein kinase 3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A Cytochrome P450 1B1 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C Cyclin-G-associated kinase G protein-coupled receptor kinase 6 Tyrosine-protein kinase BTK Insulin receptor Carbonic anhydrase 13 Bromodomain-containing protein 3 Nuclear receptor subfamily 1 group D member 1 Poly [ADP-ribose] polymerase 1 Sphingosine 1-phosphate receptor 5 cGMP-gated cation channel alpha-1 Sphingosine 1-phosphate receptor 5 P2X purinoceptor 7 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 Excitatory amino acid transporter 1 N-formyl peptide receptor 2 B2 bradykinin receptor Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B P2X purinoceptor 1 B1 bradykinin receptor Cyclin-dependent kinase 8 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Parathyroid hormone 2 receptor Potassium voltage-gated channel subfamily A member 2 Solute carrier organic anion transporter family member 1C1 Sphingosine 1-phosphate receptor 2 Sphingosine 1-phosphate receptor 1 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Interstitial collagenase Oxoeicosanoid receptor 1 Cytoplasmic tyrosine-protein kinase BMX Potassium channel subfamily K member 9 Voltage-dependent L-type calcium channel subunit alpha-1S Follicle-stimulating hormone receptor Short transient receptor potential channel 4 Adenosine deaminase Potassium channel subfamily K member 12 Sphingosine 1-phosphate receptor 2 Probable G-protein coupled receptor 63 Mitogen-activated protein kinase 8 Thyroid peroxidase Histone acetyltransferase KAT2B Neuropeptide FF receptor 2 Equilibrative nucleoside transporter 1 Multidrug and toxin extrusion protein 2 P2Y purinoceptor 6 Fatty-acid amide hydrolase 1 cAMP-dependent protein kinase catalytic subunit alpha Fatty-acid amide hydrolase 2 Inward rectifier potassium channel 13 DNA topoisomerase 2-alpha Mitogen-activated protein kinase 9 Potassium channel subfamily U member 1 Serine/threonine-protein kinase 10 Aquaporin-1 Solute carrier family 22 member 6 Lysine-specific histone demethylase 1A Solute carrier family 15 member 1 Beta-adrenergic receptor kinase 1 Calcium/calmodulin-dependent protein kinase type II subunit beta Serine/threonine-protein kinase pim-2 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Serine palmitoyltransferase 2 Histone deacetylase 11 Xanthine dehydrogenase/oxidase Nitric oxide synthase, brain Inhibitor of nuclear factor kappa-B kinase subunit alpha Chloride channel protein ClC-Kb Serine/threonine-protein kinase N2 Tyrosine-protein kinase FRK Sodium channel protein type 4 subunit alpha Cathepsin K Cyclin-dependent kinase 4 Type-2 angiotensin II receptor Trifunctional purine biosynthetic protein adenosine-3 Presenilin-1 Small conductance calcium-activated potassium channel protein 2 Cyclin-dependent-like kinase 5 Calcitonin Potassium channel subfamily K member 10 Casein kinase I isoform delta Brain-specific angiogenesis inhibitor 1 Lysine-specific demethylase 2A Neuropeptide Y receptor type 2 Mucolipin-1 Ceramide glucosyltransferase Fibroblast growth factor receptor 3 Fibroblast growth factor receptor 2 Proteinase-activated receptor 1 Toll-like receptor 4 Cytochrome P450 2D6 Vascular endothelial growth factor receptor 3 Potassium channel subfamily K member 3 Leukotriene B4 receptor 1 Sn1-specific diacylglycerol lipase alpha Casein kinase I isoform epsilon Tryptase alpha/beta-1 Voltage-dependent T-type calcium channel subunit alpha-1G TRAF2 and NCK-interacting protein kinase Lysosomal alpha-glucosidase Cathepsin Z Adhesion G protein-coupled receptor G3 Growth hormone secretagogue receptor type 1 Sodium/hydrogen exchanger 5 cAMP-dependent protein kinase catalytic subunit beta Serine palmitoyltransferase 1 Proton-coupled folate transporter Glucocorticoid receptor Potassium voltage-gated channel subfamily D member 2 Gamma-aminobutyric acid receptor subunit gamma-2 Mas-related G-protein coupled receptor member X1 G protein-activated inward rectifier potassium channel 4 Acid-sensing ion channel 2 Potassium voltage-gated channel subfamily D member 3 Platelet-activating factor acetylhydrolase Membrane primary amine oxidase Cytochrome P450 2B6 Cytochrome P450 2C8 C-X-C chemokine receptor type 4 Serum amyloid P-component Neurotensin receptor type 2 Protein kinase C eta type Bromodomain-containing protein 2 Serine/threonine-protein kinase pim-1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 G protein-coupled receptor kinase 4 Calcium/calmodulin-dependent protein kinase type 1D Lysosomal protective protein Retinoic acid receptor RXR-gamma Aquaporin-9 Neuromedin-K receptor Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 Potassium channel subfamily T member 2 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform Serine/threonine-protein kinase PLK4 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Neuronal acetylcholine receptor subunit alpha-4 Melanocortin receptor 5 Prostacyclin receptor Multidrug and toxin extrusion protein 2 Arachidonate 5-lipoxygenase Niemann-Pick C1-like protein 1 Apoptosis regulator Bcl-2 Tyrosine-protein kinase Lck Sodium/myo-inositol cotransporter 2 Oxysterols receptor LXR-alpha Cystathionine gamma-lyase Transient receptor potential cation channel subfamily M member 1 Transient receptor potential cation channel subfamily V member 5 G-protein coupled receptor 143 GTPase NRas Probable G-protein coupled receptor 139 Antithrombin-III Gamma-aminobutyric acid receptor subunit pi Gamma-aminobutyric acid receptor subunit delta Peptidyl-prolyl cis-trans isomerase A Solute carrier organic anion transporter family member 3A1 Atypical chemokine receptor 3 Inositol 1,4,5-trisphosphate receptor type 2 Tyrosine-protein kinase Fyn Metabotropic glutamate receptor 4 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor ATP-sensitive inward rectifier potassium channel 10 Chloride channel protein ClC-Ka Pancreatic triacylglycerol lipase High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B Metabotropic glutamate receptor 1 Potassium voltage-gated channel subfamily A member 6 RAF proto-oncogene serine/threonine-protein kinase Tyrosine-protein kinase Yes Transient receptor potential cation channel subfamily V member 2 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform Potassium voltage-gated channel subfamily KQT member 1 Potassium voltage-gated channel subfamily KQT member 3 Chloride channel protein 1 Small conductance calcium-activated potassium channel protein 3 3-phosphoinositide-dependent protein kinase 1 Cystathionine beta-synthase Voltage-dependent L-type calcium channel subunit alpha-1D Dopamine beta-hydroxylase Mitogen-activated protein kinase 14 Trypsin-1 Muscarinic acetylcholine receptor M2 Tubulin beta-3 chain Transient receptor potential cation channel subfamily M member 5 Inhibitor of nuclear factor kappa-B kinase subunit beta Metabotropic glutamate receptor 5 Insulin-like growth factor 1 receptor Lanosterol 14-alpha demethylase High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Histone lysine demethylase PHF8 Neuropeptide FF receptor 1 Sphingosine 1-phosphate receptor 3 Phosphatidylinositol 4-kinase type 2-alpha High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A ATP-binding cassette sub-family G member 2 Sodium channel protein type 9 subunit alpha Retinoic acid receptor RXR-alpha Purine nucleoside phosphorylase Catechol O-methyltransferase Neurotensin receptor type 2
Apoptosis regulator Bcl-2 NAD-dependent protein deacetylase sirtuin-1 Glycogen synthase kinase-3 beta
action less
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find
entity Peroxisome proliferator-activated receptor delta
relation physically interacts with
type chemical substance
type drug
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'drug'}]]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ( COUNT ( ?n ) AS ?e ) ?w WHERE { VALUES ( ?b ) { ( ontology:chemical_substance ) ( ontology:drug ) } . ?n rdf:type ?b } GROUP BY ?w } . FILTER ( ?e < ?d ) . { SELECT DISTINCT ( COUNT ( ?f ) AS ?d ) WHERE { resource:Peroxisome_proliferator-activated_receptor_delta property:physically_interacts_with ?f . { ?f rdf:type ?a . VALUES ( ?a ) { ( ontology:chemical_substance ) ( ontology:drug ) } } } } }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Single entity type
Q133895
P682
Q1057 Q181394
USER
How many metabolic processes are lesser number of nutrients involved in than tricarboxylic acid cycle ?
(c(Q181394),P682,c(Q1057))
action count
action less
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
action count
action filter_type
action find_reverse
entity Q133895
relation P682
type Q181394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?r ) WHERE { { SELECT DISTINCT ( COUNT ( ?u ) AS ?w ) WHERE { ?u property:P682 resource:Q133895 . ?u rdf:type ontology:Q181394 } } . FILTER ( ?d < ?w ) . { SELECT DISTINCT ?m ( COUNT ( ?l ) AS ?d ) WHERE { ?l property:P682 ?m . ?m rdf:type ontology:Q1057 . ?l rdf:type ontology:Q181394 } GROUP BY ?m } }
tricarboxylic acid cycle
action count
action less
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
action count
action filter_type
action find_reverse
entity tricarboxylic acid cycle
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?r ) WHERE { { SELECT DISTINCT ( COUNT ( ?u ) AS ?w ) WHERE { ?u property:biological_process resource:tricarboxylic_acid_cycle . ?u rdf:type ontology:nutrient } } . FILTER ( ?d < ?w ) . { SELECT DISTINCT ?m ( COUNT ( ?l ) AS ?d ) WHERE { ?l property:biological_process ?m . ?m rdf:type ontology:metabolic_process . ?l rdf:type ontology:nutrient } GROUP BY ?m } }
[]
metabolic process nutrient
SYSTEM
72
Q14864889 Q14907628 Q14913194 Q22274727 Q22251129 Q14905693 Q14860777 Q21134382 Q21097138 Q14819379 Q21759902 Q21133617 Q21157940 Q21116483 Q21102358 Q21114210 Q14907178 Q21121151 Q14880758 Q21761098 Q22275051 Q21100626 Q14913439 Q14916189 Q21159531 Q21111970 Q898365 Q22274640 Q22279483 Q21119973 Q14865941 Q22282595 Q14907180 Q14907181 Q14905125 Q21096256 Q14863432 Q14902250 Q21124879 Q14909347 Q15313450 Q179924 Q21101220 Q21095286 Q14863986 Q14358591 Q838181 Q21116485 Q21103172 Q22276072 Q14914233 Q14897831 Q14645736 Q14864262 Q14859628 Q14819787 Q21119193 Q22274791 Q14819781 Q22279537 Q22283508 Q14327719 Q22279533 Q14860507 Q21112195 Q14890104 Q14864417 Q14864414 Q21759328 Q900386 Q14912265 Q21760838
(c(Q181394),P682,c(Q1057))
action count
action less
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
action count
action filter_type
action find_reverse
entity Q133895
relation P682
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?r ) WHERE { { SELECT DISTINCT ( COUNT ( ?u ) AS ?w ) WHERE { ?u property:P682 resource:Q133895 . ?u rdf:type ontology:Q181394 } } . FILTER ( ?d < ?w ) . { SELECT DISTINCT ?m ( COUNT ( ?l ) AS ?d ) WHERE { ?l property:P682 ?m . ?m rdf:type ontology:Q1057 . ?l rdf:type ontology:Q181394 } GROUP BY ?m } }
cellular aromatic compound metabolic process multicellular organism metabolic process cellular ketone body metabolic process secondary metabolic process proteolysis in other organism translational initiation hormone biosynthetic process cofactor metabolic process cellular aldehyde metabolic process one-carbon metabolic process carbon fixation actin modification nitrobenzene metabolic process lymphotoxin A biosynthetic process sulfur compound metabolic process regulation of translational initiation by eIF2 alpha dephosphorylation interleukin-2 biosynthetic process reactive nitrogen species metabolic process nucleobase-containing compound metabolic process photosynthesis halogenated hydrocarbon metabolic process peptidyl-lysine modification to peptidyl-hypusine organophosphate metabolic process organic acid metabolic process selenium compound metabolic process reactive oxygen species biosynthetic process glycosylation cellular biosynthetic process cellular macromolecule metabolic process oxygen metabolic process connective tissue growth factor biosynthetic process ketone body metabolic process interleukin-13 biosynthetic process granulocyte macrophage colony-stimulating factor biosynthetic process neurotransmitter metabolic process cellular carbohydrate metabolic process reactive oxygen species metabolic process telomere maintenance via semi-conservative replication interleukin-8 biosynthetic process flavonoid metabolic process methylation-dependent chromatin silencing bioluminescence wax biosynthetic process amyloid fibril formation hormone catabolic process xenobiotic metabolic process respiratory burst interleukin-6 biosynthetic process DNA protection glycosyl compound metabolic process phosphatidic acid metabolic process isotype switching thyroid hormone metabolic process protein metabolic process cellular lipid metabolic process peptide hormone processing cellular modified amino acid metabolic process organic cyclic compound metabolic process generation of precursor metabolites and energy viral RNA genome replication IRES-dependent viral translational initiation small molecule metabolic process transposon integration receptor internalization patched ligand maturation toxin metabolic process heterocycle metabolic process drug metabolic process cellular catabolic process demethylation cellular ketone metabolic process phosphorus metabolic process
72
action count
action less
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
action count
action filter_type
action find_reverse
entity tricarboxylic acid cycle
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?r ) WHERE { { SELECT DISTINCT ( COUNT ( ?u ) AS ?w ) WHERE { ?u property:biological_process resource:tricarboxylic_acid_cycle . ?u rdf:type ontology:nutrient } } . FILTER ( ?d < ?w ) . { SELECT DISTINCT ?m ( COUNT ( ?l ) AS ?d ) WHERE { ?l property:biological_process ?m . ?m rdf:type ontology:metabolic_process . ?l rdf:type ontology:nutrient } GROUP BY ?m } }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Single entity type|Incomplete
Q21761098
P682
Q1057 Q181394
USER
And how about photosynthesis?
(c(Q181394),P682,c(Q1057))
action count
action less
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
action count
action filter_type
action find_reverse
entity Q21761098
relation P682
type Q181394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ?h ( COUNT ( ?g ) AS ?d ) WHERE { ?g property:P682 ?h . ?h rdf:type ontology:Q1057 . ?g rdf:type ontology:Q181394 } GROUP BY ?h } . { SELECT DISTINCT ( COUNT ( ?s ) AS ?w ) WHERE { ?s property:P682 resource:Q21761098 . ?s rdf:type ontology:Q181394 } } . FILTER ( ?d < ?w ) }
photosynthesis
action count
action less
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
action count
action filter_type
action find_reverse
entity photosynthesis
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ?h ( COUNT ( ?g ) AS ?d ) WHERE { ?g property:biological_process ?h . ?h rdf:type ontology:metabolic_process . ?g rdf:type ontology:nutrient } GROUP BY ?h } . { SELECT DISTINCT ( COUNT ( ?s ) AS ?w ) WHERE { ?s property:biological_process resource:photosynthesis . ?s rdf:type ontology:nutrient } } . FILTER ( ?d < ?w ) }
[]
metabolic process nutrient
SYSTEM
68
Q14864889 Q14907628 Q14913194 Q22274727 Q22251129 Q14860777 Q21134382 Q21097138 Q21759902 Q21133617 Q21157940 Q21116483 Q21102358 Q21114210 Q14907178 Q21121151 Q22275051 Q21100626 Q14913439 Q14916189 Q21159531 Q21111970 Q898365 Q22274640 Q22279483 Q21119973 Q14865941 Q22282595 Q14907180 Q14907181 Q14905125 Q21096256 Q14863432 Q14902250 Q21124879 Q14909347 Q15313450 Q179924 Q21101220 Q21095286 Q14863986 Q14358591 Q838181 Q21116485 Q21103172 Q22276072 Q14914233 Q14897831 Q14645736 Q14864262 Q14859628 Q14819787 Q21119193 Q22274791 Q14819781 Q22279537 Q22283508 Q14327719 Q22279533 Q14860507 Q21112195 Q14890104 Q14864417 Q14864414 Q21759328 Q900386 Q14912265 Q21760838
(c(Q181394),P682,c(Q1057))
action count
action less
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
action count
action filter_type
action find_reverse
entity Q21761098
relation P682
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ?h ( COUNT ( ?g ) AS ?d ) WHERE { ?g property:P682 ?h . ?h rdf:type ontology:Q1057 . ?g rdf:type ontology:Q181394 } GROUP BY ?h } . { SELECT DISTINCT ( COUNT ( ?s ) AS ?w ) WHERE { ?s property:P682 resource:Q21761098 . ?s rdf:type ontology:Q181394 } } . FILTER ( ?d < ?w ) }
cellular aromatic compound metabolic process multicellular organism metabolic process cellular ketone body metabolic process secondary metabolic process proteolysis in other organism hormone biosynthetic process cofactor metabolic process cellular aldehyde metabolic process carbon fixation actin modification nitrobenzene metabolic process lymphotoxin A biosynthetic process sulfur compound metabolic process regulation of translational initiation by eIF2 alpha dephosphorylation interleukin-2 biosynthetic process reactive nitrogen species metabolic process halogenated hydrocarbon metabolic process peptidyl-lysine modification to peptidyl-hypusine organophosphate metabolic process organic acid metabolic process selenium compound metabolic process reactive oxygen species biosynthetic process glycosylation cellular biosynthetic process cellular macromolecule metabolic process oxygen metabolic process connective tissue growth factor biosynthetic process ketone body metabolic process interleukin-13 biosynthetic process granulocyte macrophage colony-stimulating factor biosynthetic process neurotransmitter metabolic process cellular carbohydrate metabolic process reactive oxygen species metabolic process telomere maintenance via semi-conservative replication interleukin-8 biosynthetic process flavonoid metabolic process methylation-dependent chromatin silencing bioluminescence wax biosynthetic process amyloid fibril formation hormone catabolic process xenobiotic metabolic process respiratory burst interleukin-6 biosynthetic process DNA protection glycosyl compound metabolic process phosphatidic acid metabolic process isotype switching thyroid hormone metabolic process protein metabolic process cellular lipid metabolic process peptide hormone processing cellular modified amino acid metabolic process organic cyclic compound metabolic process generation of precursor metabolites and energy viral RNA genome replication IRES-dependent viral translational initiation small molecule metabolic process transposon integration receptor internalization patched ligand maturation toxin metabolic process heterocycle metabolic process drug metabolic process cellular catabolic process demethylation cellular ketone metabolic process phosphorus metabolic process
68
action count
action less
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
action count
action filter_type
action find_reverse
entity photosynthesis
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ?h ( COUNT ( ?g ) AS ?d ) WHERE { ?g property:biological_process ?h . ?h rdf:type ontology:metabolic_process . ?g rdf:type ontology:nutrient } GROUP BY ?h } . { SELECT DISTINCT ( COUNT ( ?s ) AS ?w ) WHERE { ?s property:biological_process resource:photosynthesis . ?s rdf:type ontology:nutrient } } . FILTER ( ?d < ?w ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23628775 Q5514576
P681
Q5058355
USER
Which cellular components are the components of Glycogen synthase kinase-3 beta or adenylate cyclase    RB11090 ?
OR((Q5514576,P681,c(Q5058355)), (Q23628775,P681,c(Q5058355)))
action filter_type
action union
action find
entity Q5514576
relation P681
action find
entity Q23628775
relation P681
type Q5058355
{'OR': [['Q5514576', 'P681', {'concept': 'Q5058355'}], ['Q23628775', 'P681', {'concept': 'Q5058355'}]]}
SELECT DISTINCT ?u WHERE { { { resource:Q5514576 property:P681 ?u } UNION { resource:Q23628775 property:P681 ?u } } . ?u rdf:type ontology:Q5058355 }
adenylate cyclase    RB11090 Glycogen synthase kinase-3 beta
action filter_type
action union
action find
entity Glycogen synthase kinase-3 beta
relation cell component
action find
entity adenylate cyclase    RB11090
relation cell component
type cellular component
{'OR': [['Glycogen synthase kinase-3 beta', 'cell component', {'concept': 'cellular component'}], ['adenylate cyclase    RB11090', 'cell component', {'concept': 'cellular component'}]]}
SELECT DISTINCT ?u WHERE { { { resource:Glycogen_synthase_kinase-3_beta property:cell_component ?u } UNION { resource:adenylate_cyclase____RB11090 property:cell_component ?u } } . ?u rdf:type ontology:cellular_component }
[]
cellular component
Q420927 Q14864866 Q22327475 Q21423046 Q29548 Q3824358
SYSTEM
protein complex, cell body, postsynapse, membrane-bounded organelle, plasma membrane, intracellular
Q420927 Q14864866 Q22327475 Q21423046 Q29548 Q3824358
OR((Q5514576,P681,c(Q5058355)), (Q23628775,P681,c(Q5058355)))
action filter_type
action union
action find
entity Q5514576
relation P681
action find
entity Q23628775
relation P681
type Q5058355
[ANSWERS] are the components of Glycogen synthase kinase-3 beta or adenylate cyclase RB11090
{'OR': [['Q5514576', 'P681', {'concept': 'Q5058355'}], ['Q23628775', 'P681', {'concept': 'Q5058355'}]]}
SELECT DISTINCT ?u WHERE { { { resource:Q5514576 property:P681 ?u } UNION { resource:Q23628775 property:P681 ?u } } . ?u rdf:type ontology:Q5058355 }
protein complex cell body postsynapse membrane-bounded organelle plasma membrane intracellular
Protein complex, cell body, postsynapse, membrane-bounded organelle, plasma membrane and intracellular are the components of Glycogen synthase kinase-3 beta or adenylate cyclase RB11090
protein complex cell body postsynapse membrane-bounded organelle plasma membrane intracellular
action filter_type
action union
action find
entity Glycogen synthase kinase-3 beta
relation cell component
action find
entity adenylate cyclase    RB11090
relation cell component
type cellular component
{'OR': [['Glycogen synthase kinase-3 beta', 'cell component', {'concept': 'cellular component'}], ['adenylate cyclase    RB11090', 'cell component', {'concept': 'cellular component'}]]}
SELECT DISTINCT ?u WHERE { { { resource:Glycogen_synthase_kinase-3_beta property:cell_component ?u } UNION { resource:adenylate_cyclase____RB11090 property:cell_component ?u } } . ?u rdf:type ontology:cellular_component }
[]
Clarification
Comparative|More/Less|Mult. entity type|Indirect
P361
Q5058355 Q5058355 Q15989253
USER
Which cellular components are around the same number of cellular components or parts a part of as that cellular component ?
(c(Q5058355)|c(Q15989253),P361,c(Q5058355))
[[{'concept': 'Q5058355'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?z WHERE { { ?q property:P361 ?z . VALUES ( ?q ) { ( ?z ) ( ?y ) } } . ?z rdf:type ontology:Q5058355 . ?y rdf:type ontology:Q153126 }
[[{'concept': 'cellular component'}, {'concept': 'part'}], 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?z WHERE { { ?q property:part_of ?z . VALUES ( ?q ) { ( ?z ) ( ?y ) } } . ?z rdf:type ontology:cellular_component . ?y rdf:type ontology:part }
[]
cellular component cellular component part
Comparative|More/Less|Mult. entity type|Clarification
Q22327475
SYSTEM
Did you mean postsynapse ?
(c(Q5058355)|c(Q15989253),P361,c(Q5058355))
[ANSWER]
[[{'concept': 'Q5058355'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?z WHERE { { ?q property:P361 ?z . VALUES ( ?q ) { ( ?z ) ( ?y ) } } . ?z rdf:type ontology:Q5058355 . ?y rdf:type ontology:Q153126 }
Did you mean postsynapse ?
postsynapse
[[{'concept': 'cellular component'}, {'concept': 'part'}], 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?z WHERE { { ?q property:part_of ?z . VALUES ( ?q ) { ( ?z ) ( ?y ) } } . ?z rdf:type ontology:cellular_component . ?y rdf:type ontology:part }
[]
Comparative Reasoning (All)
USER
No, I meant plasma membrane. Could you tell me the answer for that?
(c(Q5058355)|c(Q15989253),P361,c(Q5058355))
Q29548
[[{'concept': 'Q5058355'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q5058355'}]
[[{'concept': 'cellular component'}, {'concept': 'part'}], 'part of', {'concept': 'cellular component'}]
[]
Q29548 Q15320191 Q14876131
SYSTEM
plasma membrane, synaptic cleft, compact myelin
Q22329450 Q21106124 Q15320191 Q14864171 Q14876131 Q14878067 Q22327994 Q22327622 Q22327686 Q671136 Q22330431 Q189094 Q24576572 Q3824358 Q22329021 Q14864391 Q14864390 Q22328085 Q14905221 Q21199358 Q22327411 Q22327418 Q21109092 Q14864382 Q14353100 Q14863372 Q21423046 Q22327652 Q22329848 Q180436 Q22329846 Q22329160 Q24570682 Q22330051 Q22327498 Q14911512 Q22327494 Q14762605 Q21750262 Q22329401 Q24570673 Q14349538 Q22330231 Q22327505 Q22327500 Q21095308 Q79927 Q22327475 Q14864520 Q29548 Q22328105 Q14860546 Q14864866 Q193825
(c(Q5058355)|c(Q15989253),P361,c(Q5058355))
[ANSWERS] are around the same number of cellular components or parts a part of as that cellular component
[[{'concept': 'Q5058355'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?z WHERE { { { ?z property:P361 ?z } UNION { ?y property:P361 ?z } } . ?z rdf:type ontology:Q5058355 . ?y rdf:type ontology:Q153126 }
lateral part of cell viral capsid synaptic cleft cell periphery compact myelin organelle membrane rhoptry side of membrane prospore membrane synaptic vesicle unencapsulated part of cell cell surface presynaptic endosome membrane intracellular apical complex intracellular organelle synaptic vesicle membrane external encapsulating structure symbiont-containing vacuole membrane bacterial nucleoid extracellular space of host host nuclear outer membrane-endoplasmic reticulum membrane network presynaptic active zone cell projection myelin sheath membrane-bounded organelle whole membrane icosahedral viral capsid, collar cilium icosahedral viral capsid, neck ventral disc overlap zone spine apparatus membrane dinoflagellate hypocone postsynaptic endocytic zone stereocilium postsynaptic endosome midbody cell division site pellicle postsynaptic endosome membrane apical part of cell dinoflagellate epicone presynaptic endosome presynaptic endocytic zone retromer complex endoplasmic reticulum postsynapse extrinsic component of membrane plasma membrane cell septum basal part of cell cell body extracellular matrix
Plasma membrane, synaptic cleft and compact myelin are around the same number of cellular components or parts a part of as that cellular component
plasma membrane synaptic cleft compact myelin
[[{'concept': 'cellular component'}, {'concept': 'part'}], 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?z WHERE { { { ?z property:part_of ?z } UNION { ?y property:part_of ?z } } . ?z rdf:type ontology:cellular_component . ?y rdf:type ontology:part }
[]
Clarification
Comparative|More/Less|Single entity type|Indirect
P681
Q5058355 Q181394
USER
Which cellular components are components of greater number of nutrients than that cellular component ?
(c(Q181394),P681,c(Q5058355))
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?y WHERE { ?z property:P681 ?y . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q5058355 }
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?y WHERE { ?z property:cell_component ?y . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:cellular_component }
[]
cellular component nutrient
Comparative|More/Less|Single entity type|Clarification
Q29548
SYSTEM
Did you mean plasma membrane ?
(c(Q181394),P681,c(Q5058355))
[ANSWER]
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?y WHERE { ?z property:P681 ?y . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q5058355 }
Did you mean plasma membrane ?
plasma membrane
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?y WHERE { ?z property:cell_component ?y . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:cellular_component }
[]
Comparative Reasoning (All)
USER
No, I meant synaptic cleft. Could you tell me the answer for that?
(c(Q181394),P681,c(Q5058355))
Q15320191
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
[]
Q29548 Q14912978 Q14878067
SYSTEM
plasma membrane, mitochondrial nucleoid, organelle membrane
Q21106124 Q14912978 Q14864171 Q14878067 Q14864971 Q14860843 Q22327479 Q22327686 Q14330626 Q21108045 Q671136 Q14877465 Q189094 Q22328493 Q3824358 Q14864391 Q14864390 Q14914004 Q21095183 Q14873624 Q14329032 Q21199165 Q21199358 Q21759948 Q21198643 Q21106212 Q14864382 Q14353100 Q14911512 Q21136996 Q21103154 Q14863372 Q21181370 Q420927 Q21109092 Q14905147 Q180436 Q21763002 Q21095089 Q22327884 Q14819352 Q14762605 Q21750262 Q21198990 Q14876059 Q21758669 Q14873267 Q21760978 Q5419646 Q14819441 Q1640852 Q2914458 Q21107481 Q14864663 Q14349538 Q138639 Q776995 Q21971286 Q21095308 Q14864857 Q14888035 Q1065756 Q79927 Q180951 Q22327475 Q14864520 Q21112489 Q29548 Q14860546 Q14860540 Q14864866 Q899827 Q6414172 Q21095620 Q193825
(c(Q181394),P681,c(Q5058355))
And [ANSWERS] are components of greater number of nutrients than that cellular component
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?y WHERE { ?z property:P681 ?y . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q5058355 }
viral capsid mitochondrial nucleoid cell periphery organelle membrane succinate dehydrogenase complex nuclear outer membrane presynapse prospore membrane myelin sheath abaxonal region molybdopterin synthase complex synaptic vesicle receptor complex cell surface cell envelope Sec protein transport complex intracellular intracellular organelle synaptic vesicle membrane synaptic membrane dendritic spine head intercellular bridge endoplasmic reticulum membrane type III protein secretion system complex bacterial nucleoid NADH dehydrogenase complex riboflavin synthase complex GPI-anchor transamidase complex presynaptic active zone cell projection stereocilium immunoglobulin complex, circulating inhibitory synapse myelin sheath outer membrane protein complex nuclear outer membrane-endoplasmic reticulum membrane network intrinsic component of membrane cilium polyphosphate kinase complex blood microparticle cellular bud respiratory chain midbody cell division site periplasmic space phosphatidylinositol 3-kinase complex type II protein secretion system complex cell-cell junction type I protein secretion system complex excitatory synapse fibrinogen complex Schmidt-Lanterman incisure extracellular space site of polarized growth transcriptional repressor complex apical part of cell peroxisome neuromuscular junction oligosaccharyltransferase complex retromer complex cell leading edge protein-DNA complex melanosome endoplasmic reticulum chromatin postsynapse extrinsic component of membrane stereocilium tip plasma membrane basal part of cell clathrin-coated pit cell body endomembrane system kinocilium Flemming body extracellular matrix
And plasma membrane, mitochondrial nucleoid and organelle membrane are components of greater number of nutrients than that cellular component
plasma membrane mitochondrial nucleoid organelle membrane
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?y WHERE { ?z property:cell_component ?y . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:cellular_component }
[]
Clarification
Simple Question|Single Entity|Indirect
Q14878067
P361
Q5058355
USER
What is that one a part of ?
(Q14878067,P361,c(Q5058355))
action filter_type
action find
entity Q14878067
relation P361
type Q5058355
['Q14878067', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?i WHERE { resource:Q14878067 property:P361 ?i . ?i rdf:type ontology:Q5058355 }
organelle membrane
action filter_type
action find
entity organelle membrane
relation part of
type cellular component
['organelle membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?i WHERE { resource:organelle_membrane property:part_of ?i . ?i rdf:type ontology:cellular_component }
[]
cellular component
Clarification for simple ques.
Q29548
SYSTEM
Did you mean plasma membrane ?
Q29548 Q14912978 Q14878067
(Q29548,P361,c(Q5058355)) (Q14912978,P361,c(Q5058355)) (Q14878067,P361,c(Q5058355))
[ANSWER]
['Q29548', 'P361', {'concept': 'Q5058355'}] ['Q14912978', 'P361', {'concept': 'Q5058355'}] ['Q14878067', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?i WHERE { resource:Q14878067 property:P361 ?i . ?i rdf:type ontology:Q5058355 }
plasma membrane mitochondrial nucleoid organelle membrane
Did you mean plasma membrane ?
plasma membrane
['plasma membrane', 'part of', {'concept': 'cellular component'}] ['mitochondrial nucleoid', 'part of', {'concept': 'cellular component'}] ['organelle membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?i WHERE { resource:organelle_membrane property:part_of ?i . ?i rdf:type ontology:cellular_component }
[]
Simple Question (Coreferenced)
USER
No, I meant organelle membrane. Could you tell me the answer for that?
(Q14878067,P361,c(Q5058355))
Q14878067
['Q14878067', 'P361', {'concept': 'Q5058355'}]
['organelle membrane', 'part of', {'concept': 'cellular component'}]
[]
Q21423046
SYSTEM
membrane-bounded organelle
Q21423046
(Q14878067,P361,c(Q5058355))
action filter_type
action find
entity Q14878067
relation P361
type Q5058355
That one a part of is the [ANSWER]
['Q14878067', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?i WHERE { resource:Q14878067 property:P361 ?i . ?i rdf:type ontology:Q5058355 }
membrane-bounded organelle
That one a part of is the membrane-bounded organelle
membrane-bounded organelle
action filter_type
action find
entity organelle membrane
relation part of
type cellular component
['organelle membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?i WHERE { resource:organelle_membrane property:part_of ?i . ?i rdf:type ontology:cellular_component }
[]