Simple Question (Direct)
Simple Question
Q27551194
P681
Q15989253
USER
Which parts are components of proteasome regulatory particle lid subunit RPN13 YLR421C ?
(Q27551194,P681,c(Q15989253))
action filter_type
action find
entity Q27551194
relation P681
type Q15989253
['Q27551194', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?b WHERE { resource:Q27551194 property:P681 ?b . ?b rdf:type ontology:Q15989253 }
proteasome regulatory particle lid subunit RPN13 YLR421C
action filter_type
action find
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation cell component
type part
['proteasome regulatory particle lid subunit RPN13 YLR421C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?b WHERE { resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C property:cell_component ?b . ?b rdf:type ontology:part }
[]
part
Q79899 Q40260
SYSTEM
cytoplasm, nucleus
Q79899 Q40260
(Q27551194,P681,c(Q15989253))
action filter_type
action find
entity Q27551194
relation P681
type Q15989253
[ANSWERS] are components of proteasome regulatory particle lid subunit RPN13 YLR421C
['Q27551194', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?b WHERE { resource:Q27551194 property:P681 ?b . ?b rdf:type ontology:Q15989253 }
cytoplasm nucleus
Cytoplasm and nucleus are components of proteasome regulatory particle lid subunit RPN13 YLR421C
cytoplasm nucleus
action filter_type
action find
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation cell component
type part
['proteasome regulatory particle lid subunit RPN13 YLR421C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?b WHERE { resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C property:cell_component ?b . ?b rdf:type ontology:part }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27551194
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q79899) (c(Q863908),P688,Q40260)
action filter_type
action find_reverse
entity Q27551194
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q79899'] [{'concept': 'Q863908'}, 'P688', 'Q40260']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q27551194 . ?t rdf:type ontology:Q863908 }
proteasome regulatory particle lid subunit RPN13 YLR421C
action filter_type
action find_reverse
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'cytoplasm'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'nucleus']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C . ?t rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27544129
SYSTEM
proteasome regulatory particle lid subunit RPN13 YLR421C
Q27544129
(c(Q863908),P688,Q79899) (c(Q863908),P688,Q40260)
action filter_type
action find_reverse
entity Q27551194
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q79899'] [{'concept': 'Q863908'}, 'P688', 'Q40260']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q27551194 . ?t rdf:type ontology:Q863908 }
proteasome regulatory particle lid subunit RPN13 YLR421C
Proteasome regulatory particle lid subunit RPN13 YLR421C encodes that nutrient
proteasome regulatory particle lid subunit RPN13 YLR421C
action filter_type
action find_reverse
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'cytoplasm'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'nucleus']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C . ?t rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27551194
P702
Q863908
USER
Which nucleic acid sequence encodes proteasome regulatory particle lid subunit RPN13 YLR421C ?
(Q27551194,P702,c(Q863908))
action filter_type
action find
entity Q27551194
relation P702
type Q863908
['Q27551194', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?x WHERE { resource:Q27551194 property:P702 ?x . ?x rdf:type ontology:Q863908 }
proteasome regulatory particle lid subunit RPN13 YLR421C
action filter_type
action find
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation encoded by
type nucleic acid sequence
['proteasome regulatory particle lid subunit RPN13 YLR421C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?x WHERE { resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C property:encoded_by ?x . ?x rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27544129
SYSTEM
proteasome regulatory particle lid subunit RPN13 YLR421C
Q27544129
(Q27551194,P702,c(Q863908))
action filter_type
action find
entity Q27551194
relation P702
type Q863908
[ANSWER] encodes [ANSWER]
['Q27551194', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?x WHERE { resource:Q27551194 property:P702 ?x . ?x rdf:type ontology:Q863908 }
proteasome regulatory particle lid subunit RPN13 YLR421C
Proteasome regulatory particle lid subunit RPN13 YLR421C encodes proteasome regulatory particle lid subunit RPN13 YLR421C
proteasome regulatory particle lid subunit RPN13 YLR421C
action filter_type
action find
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation encoded by
type nucleic acid sequence
['proteasome regulatory particle lid subunit RPN13 YLR421C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?x WHERE { resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C property:encoded_by ?x . ?x rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23500745 Q27551194
P703
Q631147
USER
Which infraspecific names are the taxon to which proteasome regulatory particle lid subunit RPN13 YLR421C or V-type ATP synthase subunit B    EF1499 belongs to ?
OR((Q27551194,P703,c(Q631147)), (Q23500745,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27551194
relation P703
action find
entity Q23500745
relation P703
type Q631147
{'OR': [['Q27551194', 'P703', {'concept': 'Q631147'}], ['Q23500745', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?o WHERE { { { resource:Q27551194 property:P703 ?o } UNION { resource:Q23500745 property:P703 ?o } } . ?o rdf:type ontology:Q631147 }
V-type ATP synthase subunit B    EF1499 proteasome regulatory particle lid subunit RPN13 YLR421C
action filter_type
action union
action find
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation found in taxon
action find
entity V-type ATP synthase subunit B    EF1499
relation found in taxon
type infraspecific name
{'OR': [['proteasome regulatory particle lid subunit RPN13 YLR421C', 'found in taxon', {'concept': 'infraspecific name'}], ['V-type ATP synthase subunit B    EF1499', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?o WHERE { { { resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C property:found_in_taxon ?o } UNION { resource:V-type_ATP_synthase_subunit_B____EF1499 property:found_in_taxon ?o } } . ?o rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102965 Q27510868
SYSTEM
Enterococcus faecalis V583, Saccharomyces cerevisiae S288c
Q21102965 Q27510868
OR((Q27551194,P703,c(Q631147)), (Q23500745,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27551194
relation P703
action find
entity Q23500745
relation P703
type Q631147
[ANSWERS] are the taxon to which proteasome regulatory particle lid subunit RPN13 YLR421C or V-type ATP synthase subunit B EF1499 belongs to
{'OR': [['Q27551194', 'P703', {'concept': 'Q631147'}], ['Q23500745', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?o WHERE { { { resource:Q27551194 property:P703 ?o } UNION { resource:Q23500745 property:P703 ?o } } . ?o rdf:type ontology:Q631147 }
Enterococcus faecalis V583 Saccharomyces cerevisiae S288c
Enterococcus faecalis V583 and Saccharomyces cerevisiae S288c are the taxon to which proteasome regulatory particle lid subunit RPN13 YLR421C or V-type ATP synthase subunit B EF1499 belongs to
Enterococcus faecalis V583 Saccharomyces cerevisiae S288c
action filter_type
action union
action find
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation found in taxon
action find
entity V-type ATP synthase subunit B    EF1499
relation found in taxon
type infraspecific name
{'OR': [['proteasome regulatory particle lid subunit RPN13 YLR421C', 'found in taxon', {'concept': 'infraspecific name'}], ['V-type ATP synthase subunit B    EF1499', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?o WHERE { { { resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C property:found_in_taxon ?o } UNION { resource:V-type_ATP_synthase_subunit_B____EF1499 property:found_in_taxon ?o } } . ?o rdf:type ontology:infraspecific_name }
[]
Clarification
Comparative|Count over More/Less|Single entity type|Indirect
P703
Q631147 Q863908
USER
How many infraspecific names are greater number of nucleic acid sequences found than that infraspecific name ?
(c(Q863908),P703,c(Q631147))
[{'concept': 'Q863908'}, 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:P703 ?y . ?z rdf:type ontology:Q863908 . ?y rdf:type ontology:Q631147 }
[{'concept': 'nucleic acid sequence'}, 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:found_in_taxon ?y . ?z rdf:type ontology:nucleic_acid_sequence . ?y rdf:type ontology:infraspecific_name }
[]
infraspecific name nucleic acid sequence
Comparative|Count over More/Less|Single entity type|Clarification
Q21102965
SYSTEM
Did you mean Enterococcus faecalis V583 ?
(c(Q863908),P703,c(Q631147))
[ANSWER]
[{'concept': 'Q863908'}, 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:P703 ?y . ?z rdf:type ontology:Q863908 . ?y rdf:type ontology:Q631147 }
Did you mean Enterococcus faecalis V583 ?
Enterococcus faecalis V583
[{'concept': 'nucleic acid sequence'}, 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:found_in_taxon ?y . ?z rdf:type ontology:nucleic_acid_sequence . ?y rdf:type ontology:infraspecific_name }
[]
Comparative Reasoning (Count) (All)
USER
No, I meant Saccharomyces cerevisiae S288c. Could you tell me the answer for that?
(c(Q863908),P703,c(Q631147))
Q27510868
[{'concept': 'Q863908'}, 'P703', {'concept': 'Q631147'}]
[{'concept': 'nucleic acid sequence'}, 'found in taxon', {'concept': 'infraspecific name'}]
[]
SYSTEM
5
Q21102998 Q21102986 Q21102918 Q21102988 Q23309229
(c(Q863908),P703,c(Q631147))
[ANSWER]
[{'concept': 'Q863908'}, 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:P703 ?y . ?z rdf:type ontology:Q863908 . ?y rdf:type ontology:Q631147 }
Amycolatopsis mediterranei U32 Mycobacterium smegmatis str. MC2 155 Sinorhizobium meliloti 1021 Streptomyces coelicolor A3(2) Sinorhizobium fredii NGR234
5
[{'concept': 'nucleic acid sequence'}, 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:found_in_taxon ?y . ?z rdf:type ontology:nucleic_acid_sequence . ?y rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q24148078
Q631147
USER
And also tell me about 50S ribosomal protein L18    ECUMN_3777?
(Q24148078,P703,c(Q631147))
action count
action filter_type
action find
entity Q24148078
relation P703
type Q631147
['Q24148078', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?d ) WHERE { resource:Q24148078 property:P703 ?r . ?r rdf:type ontology:Q631147 }
50S ribosomal protein L18    ECUMN_3777
action count
action filter_type
action find
entity 50S ribosomal protein L18    ECUMN_3777
relation found in taxon
type infraspecific name
['50S ribosomal protein L18    ECUMN_3777', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?d ) WHERE { resource:50S_ribosomal_protein_L18____ECUMN_3777 property:found_in_taxon ?r . ?r rdf:type ontology:infraspecific_name }
[]
infraspecific name
SYSTEM
1
(Q24148078,P703,c(Q631147))
action count
action filter_type
action find
entity Q24148078
relation P703
type Q631147
[ANSWER]
['Q24148078', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?d ) WHERE { resource:Q24148078 property:P703 ?r . ?r rdf:type ontology:Q631147 }
1
action count
action filter_type
action find
entity 50S ribosomal protein L18    ECUMN_3777
relation found in taxon
type infraspecific name
['50S ribosomal protein L18    ECUMN_3777', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?d ) WHERE { resource:50S_ribosomal_protein_L18____ECUMN_3777 property:found_in_taxon ?r . ?r rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23136343 Q27551194
P703
Q631147
USER
Which infraspecific names are proteasome regulatory particle lid subunit RPN13 YLR421C or hypothetical protein    ECs4981 a part of ?
OR((Q27551194,P703,c(Q631147)), (Q23136343,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27551194
relation P703
action find
entity Q23136343
relation P703
type Q631147
{'OR': [['Q27551194', 'P703', {'concept': 'Q631147'}], ['Q23136343', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?y WHERE { { ?n property:P703 ?y . VALUES ( ?n ) { ( resource:Q27551194 ) ( resource:Q23136343 ) } } . ?y rdf:type ontology:Q631147 }
hypothetical protein    ECs4981 proteasome regulatory particle lid subunit RPN13 YLR421C
action filter_type
action union
action find
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation found in taxon
action find
entity hypothetical protein    ECs4981
relation found in taxon
type infraspecific name
{'OR': [['proteasome regulatory particle lid subunit RPN13 YLR421C', 'found in taxon', {'concept': 'infraspecific name'}], ['hypothetical protein    ECs4981', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?y WHERE { { ?n property:found_in_taxon ?y . VALUES ( ?n ) { ( resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C ) ( resource:hypothetical_protein____ECs4981 ) } } . ?y rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868 Q21102930
SYSTEM
Saccharomyces cerevisiae S288c, Escherichia coli O157:H7 str. Sakai
Q27510868 Q21102930
OR((Q27551194,P703,c(Q631147)), (Q23136343,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27551194
relation P703
action find
entity Q23136343
relation P703
type Q631147
[ANSWERS] are proteasome regulatory particle lid subunit RPN13 YLR421C or hypothetical protein ECs4981 a part of
{'OR': [['Q27551194', 'P703', {'concept': 'Q631147'}], ['Q23136343', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?y WHERE { { ?n property:P703 ?y . VALUES ( ?n ) { ( resource:Q27551194 ) ( resource:Q23136343 ) } } . ?y rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c Escherichia coli O157:H7 str. Sakai
Saccharomyces cerevisiae S288c and Escherichia coli O157:H7 str. Sakai are proteasome regulatory particle lid subunit RPN13 YLR421C or hypothetical protein ECs4981 a part of
Saccharomyces cerevisiae S288c Escherichia coli O157:H7 str. Sakai
action filter_type
action union
action find
entity proteasome regulatory particle lid subunit RPN13 YLR421C
relation found in taxon
action find
entity hypothetical protein    ECs4981
relation found in taxon
type infraspecific name
{'OR': [['proteasome regulatory particle lid subunit RPN13 YLR421C', 'found in taxon', {'concept': 'infraspecific name'}], ['hypothetical protein    ECs4981', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?y WHERE { { ?n property:found_in_taxon ?y . VALUES ( ?n ) { ( resource:proteasome_regulatory_particle_lid_subunit_RPN13_YLR421C ) ( resource:hypothetical_protein____ECs4981 ) } } . ?y rdf:type ontology:infraspecific_name }
[]