Simple Question (Direct)
Simple Question
Q27550767
P703
Q631147
USER
Which taxon does oxysterol-binding protein related protein HES1 YOR237W belong to ?
(Q27550767,P703,c(Q631147))
action filter_type
action find
entity Q27550767
relation P703
type Q631147
['Q27550767', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:Q631147 . resource:Q27550767 property:P703 ?j }
oxysterol-binding protein related protein HES1 YOR237W
action filter_type
action find
entity oxysterol-binding protein related protein HES1 YOR237W
relation found in taxon
type infraspecific name
['oxysterol-binding protein related protein HES1 YOR237W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:infraspecific_name . resource:oxysterol-binding_protein_related_protein_HES1_YOR237W property:found_in_taxon ?j }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27550767,P703,c(Q631147))
action filter_type
action find
entity Q27550767
relation P703
type Q631147
[ANSWER] oxysterol-binding protein related protein HES1 YOR237W belong to
['Q27550767', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:Q631147 . resource:Q27550767 property:P703 ?j }
Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c oxysterol-binding protein related protein HES1 YOR237W belong to
Saccharomyces cerevisiae S288c
action filter_type
action find
entity oxysterol-binding protein related protein HES1 YOR237W
relation found in taxon
type infraspecific name
['oxysterol-binding protein related protein HES1 YOR237W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:infraspecific_name . resource:oxysterol-binding_protein_related_protein_HES1_YOR237W property:found_in_taxon ?j }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27550767
P702
Q863908
USER
What encodes oxysterol-binding protein related protein HES1 YOR237W ?
(Q27550767,P702,c(Q863908))
action filter_type
action find
entity Q27550767
relation P702
type Q863908
['Q27550767', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q863908 . resource:Q27550767 property:P702 ?w }
oxysterol-binding protein related protein HES1 YOR237W
action filter_type
action find
entity oxysterol-binding protein related protein HES1 YOR237W
relation encoded by
type nucleic acid sequence
['oxysterol-binding protein related protein HES1 YOR237W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:nucleic_acid_sequence . resource:oxysterol-binding_protein_related_protein_HES1_YOR237W property:encoded_by ?w }
[]
nucleic acid sequence
Q27543704
SYSTEM
oxysterol-binding protein related protein HES1 YOR237W
Q27543704
(Q27550767,P702,c(Q863908))
action filter_type
action find
entity Q27550767
relation P702
type Q863908
[ANSWER] encodes [ANSWER]
['Q27550767', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q863908 . resource:Q27550767 property:P702 ?w }
oxysterol-binding protein related protein HES1 YOR237W
Oxysterol-binding protein related protein HES1 YOR237W encodes oxysterol-binding protein related protein HES1 YOR237W
oxysterol-binding protein related protein HES1 YOR237W
action filter_type
action find
entity oxysterol-binding protein related protein HES1 YOR237W
relation encoded by
type nucleic acid sequence
['oxysterol-binding protein related protein HES1 YOR237W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:nucleic_acid_sequence . resource:oxysterol-binding_protein_related_protein_HES1_YOR237W property:encoded_by ?w }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q24276932
Q863908
USER
And also tell me about cyanate hydratase    O3K_19775?
(Q24276932,P702,c(Q863908))
action filter_type
action find
entity Q24276932
relation P702
type Q863908
['Q24276932', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q863908 . resource:Q24276932 property:P702 ?a }
cyanate hydratase    O3K_19775
action filter_type
action find
entity cyanate hydratase    O3K_19775
relation encoded by
type nucleic acid sequence
['cyanate hydratase    O3K_19775', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:nucleic_acid_sequence . resource:cyanate_hydratase____O3K_19775 property:encoded_by ?a }
[]
nucleic acid sequence
Q23108720
SYSTEM
cyanate hydratase    O3K_19775
Q23108720
(Q24276932,P702,c(Q863908))
action filter_type
action find
entity Q24276932
relation P702
type Q863908
[ANSWER]
['Q24276932', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q863908 . resource:Q24276932 property:P702 ?a }
cyanate hydratase    O3K_19775
cyanate hydratase    O3K_19775
action filter_type
action find
entity cyanate hydratase    O3K_19775
relation encoded by
type nucleic acid sequence
['cyanate hydratase    O3K_19775', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:nucleic_acid_sequence . resource:cyanate_hydratase____O3K_19775 property:encoded_by ?a }
[]
Verification (Boolean) (All)
Verification|3 entities, 2 direct, 2(direct) are query entities, subject is indirect
Q23108720 Q22134808 Q24276932
P688
Q181394
USER
Does that nucleic acid sequence encodes putative metallodependent hydrolase    ECIAI39_2061 and cyanate hydratase    O3K_19775 ?
(Q23108720,P688,Q22134808) (Q23108720,P688,Q24276932)
action is_in
entity Q23108720
action intersection
action find_reverse
entity Q22134808
relation P688
action find_reverse
entity Q24276932
relation P688
['Q23108720', 'P688', 'Q22134808'] ['Q23108720', 'P688', 'Q24276932']
ASK WHERE { resource:Q23108720 property:P688 resource:Q22134808 . resource:Q23108720 property:P688 resource:Q24276932 }
cyanate hydratase    O3K_19775 putative metallodependent hydrolase    ECIAI39_2061 cyanate hydratase    O3K_19775
action is_in
entity cyanate hydratase    O3K_19775
action intersection
action find_reverse
entity putative metallodependent hydrolase    ECIAI39_2061
relation encodes
action find_reverse
entity cyanate hydratase    O3K_19775
relation encodes
['cyanate hydratase    O3K_19775', 'encodes', 'putative metallodependent hydrolase    ECIAI39_2061'] ['cyanate hydratase    O3K_19775', 'encodes', 'cyanate hydratase    O3K_19775']
ASK WHERE { resource:cyanate_hydratase____O3K_19775 property:encodes resource:putative_metallodependent_hydrolase____ECIAI39_2061 . resource:cyanate_hydratase____O3K_19775 property:encodes resource:cyanate_hydratase____O3K_19775 }
[]
nutrient
SYSTEM
NO and YES respectively
(Q23108720,P688,Q22134808) (Q23108720,P688,Q24276932)
action is_in
entity Q23108720
action intersection
action find_reverse
entity Q22134808
relation P688
action find_reverse
entity Q24276932
relation P688
[ANSWER]
['Q23108720', 'P688', 'Q22134808'] ['Q23108720', 'P688', 'Q24276932']
ASK WHERE { resource:Q23108720 property:P688 resource:Q22134808 . resource:Q23108720 property:P688 resource:Q24276932 }
NO and YES respectively
action is_in
entity cyanate hydratase    O3K_19775
action intersection
action find_reverse
entity putative metallodependent hydrolase    ECIAI39_2061
relation encodes
action find_reverse
entity cyanate hydratase    O3K_19775
relation encodes
['cyanate hydratase    O3K_19775', 'encodes', 'putative metallodependent hydrolase    ECIAI39_2061'] ['cyanate hydratase    O3K_19775', 'encodes', 'cyanate hydratase    O3K_19775']
ASK WHERE { resource:cyanate_hydratase____O3K_19775 property:encodes resource:putative_metallodependent_hydrolase____ECIAI39_2061 . resource:cyanate_hydratase____O3K_19775 property:encodes resource:cyanate_hydratase____O3K_19775 }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q27543704 Q23431811 Q27550767
P688
Q181394
USER
Does oxysterol-binding protein related protein HES1 YOR237W encode transporter    AHA_0663 and oxysterol-binding protein related protein HES1 YOR237W ?
(Q27543704,P688,Q23431811) (Q27543704,P688,Q27550767)
action is_in
entity Q27543704
action intersection
action find_reverse
entity Q23431811
relation P688
action find_reverse
entity Q27550767
relation P688
['Q27543704', 'P688', 'Q23431811'] ['Q27543704', 'P688', 'Q27550767']
ASK WHERE { resource:Q27543704 property:P688 resource:Q23431811 . resource:Q27543704 property:P688 resource:Q27550767 }
oxysterol-binding protein related protein HES1 YOR237W transporter    AHA_0663 oxysterol-binding protein related protein HES1 YOR237W
action is_in
entity oxysterol-binding protein related protein HES1 YOR237W
action intersection
action find_reverse
entity transporter    AHA_0663
relation encodes
action find_reverse
entity oxysterol-binding protein related protein HES1 YOR237W
relation encodes
['oxysterol-binding protein related protein HES1 YOR237W', 'encodes', 'transporter    AHA_0663'] ['oxysterol-binding protein related protein HES1 YOR237W', 'encodes', 'oxysterol-binding protein related protein HES1 YOR237W']
ASK WHERE { resource:oxysterol-binding_protein_related_protein_HES1_YOR237W property:encodes resource:transporter____AHA_0663 . resource:oxysterol-binding_protein_related_protein_HES1_YOR237W property:encodes resource:oxysterol-binding_protein_related_protein_HES1_YOR237W }
[]
nutrient
SYSTEM
NO and YES respectively
(Q27543704,P688,Q23431811) (Q27543704,P688,Q27550767)
action is_in
entity Q27543704
action intersection
action find_reverse
entity Q23431811
relation P688
action find_reverse
entity Q27550767
relation P688
[ANSWER]
['Q27543704', 'P688', 'Q23431811'] ['Q27543704', 'P688', 'Q27550767']
ASK WHERE { resource:Q27543704 property:P688 resource:Q23431811 . resource:Q27543704 property:P688 resource:Q27550767 }
NO and YES respectively
action is_in
entity oxysterol-binding protein related protein HES1 YOR237W
action intersection
action find_reverse
entity transporter    AHA_0663
relation encodes
action find_reverse
entity oxysterol-binding protein related protein HES1 YOR237W
relation encodes
['oxysterol-binding protein related protein HES1 YOR237W', 'encodes', 'transporter    AHA_0663'] ['oxysterol-binding protein related protein HES1 YOR237W', 'encodes', 'oxysterol-binding protein related protein HES1 YOR237W']
ASK WHERE { resource:oxysterol-binding_protein_related_protein_HES1_YOR237W property:encodes resource:transporter____AHA_0663 . resource:oxysterol-binding_protein_related_protein_HES1_YOR237W property:encodes resource:oxysterol-binding_protein_related_protein_HES1_YOR237W }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23190170 Q27543704
P702
Q181394
USER
Which nutrients do oxysterol-binding protein related protein HES1 YOR237W or glycerol-3-phosphate acyltransferase    BAS3128 encode ?
OR((c(Q181394),P702,Q27543704), (c(Q181394),P702,Q23190170))
action filter_type
action union
action find_reverse
entity Q27543704
relation P702
action find_reverse
entity Q23190170
relation P702
type Q181394
{'OR': [[{'concept': 'Q181394'}, 'P702', 'Q27543704'], [{'concept': 'Q181394'}, 'P702', 'Q23190170']]}
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q181394 . { VALUES ( ?a ) { ( resource:Q27543704 ) ( resource:Q23190170 ) } . ?i property:P702 ?a } }
glycerol-3-phosphate acyltransferase    BAS3128 oxysterol-binding protein related protein HES1 YOR237W
action filter_type
action union
action find_reverse
entity oxysterol-binding protein related protein HES1 YOR237W
relation encoded by
action find_reverse
entity glycerol-3-phosphate acyltransferase    BAS3128
relation encoded by
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'encoded by', 'oxysterol-binding protein related protein HES1 YOR237W'], [{'concept': 'nutrient'}, 'encoded by', 'glycerol-3-phosphate acyltransferase    BAS3128']]}
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:nutrient . { VALUES ( ?a ) { ( resource:oxysterol-binding_protein_related_protein_HES1_YOR237W ) ( resource:glycerol-3-phosphate_acyltransferase____BAS3128 ) } . ?i property:encoded_by ?a } }
[]
nutrient
Q27550767 Q23508808
SYSTEM
oxysterol-binding protein related protein HES1 YOR237W, glycerol-3-phosphate acyltransferase    BAS3128
Q27550767 Q23508808
OR((c(Q181394),P702,Q27543704), (c(Q181394),P702,Q23190170))
action filter_type
action union
action find_reverse
entity Q27543704
relation P702
action find_reverse
entity Q23190170
relation P702
type Q181394
[ANSWERS]
{'OR': [[{'concept': 'Q181394'}, 'P702', 'Q27543704'], [{'concept': 'Q181394'}, 'P702', 'Q23190170']]}
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q181394 . { VALUES ( ?a ) { ( resource:Q27543704 ) ( resource:Q23190170 ) } . ?i property:P702 ?a } }
oxysterol-binding protein related protein HES1 YOR237W glycerol-3-phosphate acyltransferase    BAS3128
Oxysterol-binding protein related protein HES1 YOR237W and glycerol-3-phosphate acyltransferase BAS3128 oxysterol-binding protein related protein HES1 YOR237W or glycerol-3-phosphate acyltransferase BAS3128 encode
oxysterol-binding protein related protein HES1 YOR237W glycerol-3-phosphate acyltransferase    BAS3128
action filter_type
action union
action find_reverse
entity oxysterol-binding protein related protein HES1 YOR237W
relation encoded by
action find_reverse
entity glycerol-3-phosphate acyltransferase    BAS3128
relation encoded by
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'encoded by', 'oxysterol-binding protein related protein HES1 YOR237W'], [{'concept': 'nutrient'}, 'encoded by', 'glycerol-3-phosphate acyltransferase    BAS3128']]}
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:nutrient . { VALUES ( ?a ) { ( resource:oxysterol-binding_protein_related_protein_HES1_YOR237W ) ( resource:glycerol-3-phosphate_acyltransferase____BAS3128 ) } . ?i property:encoded_by ?a } }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q18258412 Q23108720
P688
Q181394
USER
Which nutrients do cyanate hydratase    O3K_19775 or Pdlim5 encode ?
OR((Q23108720,P688,c(Q181394)), (Q18258412,P688,c(Q181394)))
action filter_type
action union
action find
entity Q23108720
relation P688
action find
entity Q18258412
relation P688
type Q181394
{'OR': [['Q23108720', 'P688', {'concept': 'Q181394'}], ['Q18258412', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:Q181394 . { ?z property:P688 ?j . VALUES ( ?z ) { ( resource:Q18258412 ) ( resource:Q23108720 ) } } }
Pdlim5 cyanate hydratase    O3K_19775
action filter_type
action union
action find
entity cyanate hydratase    O3K_19775
relation encodes
action find
entity Pdlim5
relation encodes
type nutrient
{'OR': [['cyanate hydratase    O3K_19775', 'encodes', {'concept': 'nutrient'}], ['Pdlim5', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:nutrient . { ?z property:encodes ?j . VALUES ( ?z ) { ( resource:Pdlim5 ) ( resource:cyanate_hydratase____O3K_19775 ) } } }
[]
nutrient
Q21990884 Q24276932
SYSTEM
PDZ and LIM domain protein 5, cyanate hydratase    O3K_19775
Q21990884 Q24276932
OR((Q23108720,P688,c(Q181394)), (Q18258412,P688,c(Q181394)))
action filter_type
action union
action find
entity Q23108720
relation P688
action find
entity Q18258412
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q23108720', 'P688', {'concept': 'Q181394'}], ['Q18258412', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:Q181394 . { ?z property:P688 ?j . VALUES ( ?z ) { ( resource:Q18258412 ) ( resource:Q23108720 ) } } }
PDZ and LIM domain protein 5 cyanate hydratase    O3K_19775
Cyanate hydratase O3K_19775 or Pdlim5 encode s PDZ and LIM domain protein 5 and cyanate hydratase O3K 19775
PDZ and LIM domain protein 5 cyanate hydratase    O3K_19775
action filter_type
action union
action find
entity cyanate hydratase    O3K_19775
relation encodes
action find
entity Pdlim5
relation encodes
type nutrient
{'OR': [['cyanate hydratase    O3K_19775', 'encodes', {'concept': 'nutrient'}], ['Pdlim5', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?j WHERE { ?j rdf:type ontology:nutrient . { ?z property:encodes ?j . VALUES ( ?z ) { ( resource:Pdlim5 ) ( resource:cyanate_hydratase____O3K_19775 ) } } }
[]