Simple Question (Direct)
Simple Question
Q21130085
P129
Q8386
USER
Which drug does Mitogen-activated protein kinase kinase kinase kinase 5 collaborate with ?
(Q21130085,P129,c(Q8386))
action filter_type
action find
entity Q21130085
relation P129
type Q8386
['Q21130085', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ?e WHERE { resource:Q21130085 property:P129 ?e . ?e rdf:type ontology:Q8386 }
Mitogen-activated protein kinase kinase kinase kinase 5
action filter_type
action find
entity Mitogen-activated protein kinase kinase kinase kinase 5
relation physically interacts with
type drug
['Mitogen-activated protein kinase kinase kinase kinase 5', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ?e WHERE { resource:Mitogen-activated_protein_kinase_kinase_kinase_kinase_5 property:physically_interacts_with ?e . ?e rdf:type ontology:drug }
[]
drug
Q894611
SYSTEM
bosutinib
Q894611
(Q21130085,P129,c(Q8386))
action filter_type
action find
entity Q21130085
relation P129
type Q8386
Mitogen-activated protein kinase kinase 5 with collaborates with [ANSWER]
['Q21130085', 'P129', {'concept': 'Q8386'}]
SELECT DISTINCT ?e WHERE { resource:Q21130085 property:P129 ?e . ?e rdf:type ontology:Q8386 }
bosutinib
Mitogen-activated protein kinase kinase 5 with collaborates with bosutinib
bosutinib
action filter_type
action find
entity Mitogen-activated protein kinase kinase kinase kinase 5
relation physically interacts with
type drug
['Mitogen-activated protein kinase kinase kinase kinase 5', 'physically interacts with', {'concept': 'drug'}]
SELECT DISTINCT ?e WHERE { resource:Mitogen-activated_protein_kinase_kinase_kinase_kinase_5 property:physically_interacts_with ?e . ?e rdf:type ontology:drug }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21130085
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q894611)
action filter_type
action find_reverse
entity Q21130085
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q894611']
SELECT DISTINCT ?m WHERE { ?m property:P688 resource:Q21130085 . ?m rdf:type ontology:Q863908 }
Mitogen-activated protein kinase kinase kinase kinase 5
action filter_type
action find_reverse
entity Mitogen-activated protein kinase kinase kinase kinase 5
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'bosutinib']
SELECT DISTINCT ?m WHERE { ?m property:encodes resource:Mitogen-activated_protein_kinase_kinase_kinase_kinase_5 . ?m rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18036250
SYSTEM
MAP4K5
Q18036250
(c(Q863908),P688,Q894611)
action filter_type
action find_reverse
entity Q21130085
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q894611']
SELECT DISTINCT ?m WHERE { ?m property:P688 resource:Q21130085 . ?m rdf:type ontology:Q863908 }
MAP4K5
MAP4K5 encodes that nutrient
MAP4K5
action filter_type
action find_reverse
entity Mitogen-activated protein kinase kinase kinase kinase 5
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'bosutinib']
SELECT DISTINCT ?m WHERE { ?m property:encodes resource:Mitogen-activated_protein_kinase_kinase_kinase_kinase_5 . ?m rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation|Incomplete
Q23473791 Q21130085
P688
Q863908
USER
Or nucleotidyl transferase    Caur_1759?
OR((c(Q863908),P688,Q21130085), (c(Q863908),P688,Q23473791))
action filter_type
action union
action find_reverse
entity Q21130085
relation P688
action find_reverse
entity Q23473791
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q21130085'], [{'concept': 'Q863908'}, 'P688', 'Q23473791']]}
SELECT DISTINCT ?a WHERE { { VALUES ( ?o ) { ( resource:Q21130085 ) ( resource:Q23473791 ) } . ?a property:P688 ?o } . ?a rdf:type ontology:Q863908 }
nucleotidyl transferase    Caur_1759 Mitogen-activated protein kinase kinase kinase kinase 5
action filter_type
action union
action find_reverse
entity Mitogen-activated protein kinase kinase kinase kinase 5
relation encodes
action find_reverse
entity nucleotidyl transferase    Caur_1759
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Mitogen-activated protein kinase kinase kinase kinase 5'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'nucleotidyl transferase    Caur_1759']]}
SELECT DISTINCT ?a WHERE { { VALUES ( ?o ) { ( resource:Mitogen-activated_protein_kinase_kinase_kinase_kinase_5 ) ( resource:nucleotidyl_transferase____Caur_1759 ) } . ?a property:encodes ?o } . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23393615 Q18036250
SYSTEM
nucleotidyl transferase    Caur_1759, MAP4K5
Q23393615 Q18036250
OR((c(Q863908),P688,Q21130085), (c(Q863908),P688,Q23473791))
action filter_type
action union
action find_reverse
entity Q21130085
relation P688
action find_reverse
entity Q23473791
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q21130085'], [{'concept': 'Q863908'}, 'P688', 'Q23473791']]}
SELECT DISTINCT ?a WHERE { { VALUES ( ?o ) { ( resource:Q21130085 ) ( resource:Q23473791 ) } . ?a property:P688 ?o } . ?a rdf:type ontology:Q863908 }
nucleotidyl transferase    Caur_1759 MAP4K5
nucleotidyl transferase    Caur_1759 MAP4K5
action filter_type
action union
action find_reverse
entity Mitogen-activated protein kinase kinase kinase kinase 5
relation encodes
action find_reverse
entity nucleotidyl transferase    Caur_1759
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Mitogen-activated protein kinase kinase kinase kinase 5'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'nucleotidyl transferase    Caur_1759']]}
SELECT DISTINCT ?a WHERE { { VALUES ( ?o ) { ( resource:Mitogen-activated_protein_kinase_kinase_kinase_kinase_5 ) ( resource:nucleotidyl_transferase____Caur_1759 ) } . ?a property:encodes ?o } . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Union|Multiple_Relation
Q21115201 Q18036250
P702 P684
Q863908
USER
Which nucleic acid sequences are an otrhologus genes for MAP4K5 or are the gene that encodes Zinc finger protein Aiolos ?
OR((Q18036250,P684,c(Q863908)), (Q21115201,P702,c(Q863908)))
action filter_type
action union
action find
entity Q18036250
relation P684
action find
entity Q21115201
relation P702
type Q863908
{'OR': [['Q18036250', 'P684', {'concept': 'Q863908'}], ['Q21115201', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?c WHERE { { { resource:Q18036250 property:P684 ?c } UNION { resource:Q21115201 property:P702 ?c } } . ?c rdf:type ontology:Q863908 }
Zinc finger protein Aiolos MAP4K5
action filter_type
action union
action find
entity MAP4K5
relation ortholog
action find
entity Zinc finger protein Aiolos
relation encoded by
type nucleic acid sequence
{'OR': [['MAP4K5', 'ortholog', {'concept': 'nucleic acid sequence'}], ['Zinc finger protein Aiolos', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?c WHERE { { { resource:MAP4K5 property:ortholog ?c } UNION { resource:Zinc_finger_protein_Aiolos property:encoded_by ?c } } . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18304191 Q18036500
SYSTEM
Map4k5, IKZF3
Q18304191 Q18036500
OR((Q18036250,P684,c(Q863908)), (Q21115201,P702,c(Q863908)))
action filter_type
action union
action find
entity Q18036250
relation P684
action find
entity Q21115201
relation P702
type Q863908
[ANSWERS] are an otrhologus genes for MAP4K5 or are the gene that encodes Zinc finger protein Aiolos
{'OR': [['Q18036250', 'P684', {'concept': 'Q863908'}], ['Q21115201', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?c WHERE { { { resource:Q18036250 property:P684 ?c } UNION { resource:Q21115201 property:P702 ?c } } . ?c rdf:type ontology:Q863908 }
Map4k5 IKZF3
Map4k5 and IKZF3 are an otrhologus genes for MAP4K5 or are the gene that encodes Zinc finger protein Aiolos
Map4k5 IKZF3
action filter_type
action union
action find
entity MAP4K5
relation ortholog
action find
entity Zinc finger protein Aiolos
relation encoded by
type nucleic acid sequence
{'OR': [['MAP4K5', 'ortholog', {'concept': 'nucleic acid sequence'}], ['Zinc finger protein Aiolos', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?c WHERE { { { resource:MAP4K5 property:ortholog ?c } UNION { resource:Zinc_finger_protein_Aiolos property:encoded_by ?c } } . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18036500
P2293
Q2057971
USER
Which health problem has genetic connection with IKZF3 ?
(Q18036500,P2293,c(Q2057971))
action filter_type
action find
entity Q18036500
relation P2293
type Q2057971
['Q18036500', 'P2293', {'concept': 'Q2057971'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q2057971 . resource:Q18036500 property:P2293 ?g }
IKZF3
action filter_type
action find
entity IKZF3
relation genetic association
type health problem
['IKZF3', 'genetic association', {'concept': 'health problem'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:health_problem . resource:IKZF3 property:genetic_association ?g }
[]
health problem
Q1072420
SYSTEM
primary biliary cirrhosis
Q1072420
(Q18036500,P2293,c(Q2057971))
action filter_type
action find
entity Q18036500
relation P2293
type Q2057971
[ANSWER] has genetic connection with IKZF3
['Q18036500', 'P2293', {'concept': 'Q2057971'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q2057971 . resource:Q18036500 property:P2293 ?g }
primary biliary cirrhosis
Primary biliary cirrhosis has genetic connection with IKZF3
primary biliary cirrhosis
action filter_type
action find
entity IKZF3
relation genetic association
type health problem
['IKZF3', 'genetic association', {'concept': 'health problem'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:health_problem . resource:IKZF3 property:genetic_association ?g }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q20788827
Q2057971
USER
And also tell me about LOC100289473?
(Q20788827,P2293,c(Q2057971))
action filter_type
action find
entity Q20788827
relation P2293
type Q2057971
['Q20788827', 'P2293', {'concept': 'Q2057971'}]
SELECT DISTINCT ?n WHERE { resource:Q20788827 property:P2293 ?n . ?n rdf:type ontology:Q2057971 }
LOC100289473
action filter_type
action find
entity LOC100289473
relation genetic association
type health problem
['LOC100289473', 'genetic association', {'concept': 'health problem'}]
SELECT DISTINCT ?n WHERE { resource:LOC100289473 property:genetic_association ?n . ?n rdf:type ontology:health_problem }
[]
health problem
Q794026
SYSTEM
Azoospermia
Q794026
(Q20788827,P2293,c(Q2057971))
action filter_type
action find
entity Q20788827
relation P2293
type Q2057971
[ANSWER]
['Q20788827', 'P2293', {'concept': 'Q2057971'}]
SELECT DISTINCT ?n WHERE { resource:Q20788827 property:P2293 ?n . ?n rdf:type ontology:Q2057971 }
Azoospermia
Azoospermia
action filter_type
action find
entity LOC100289473
relation genetic association
type health problem
['LOC100289473', 'genetic association', {'concept': 'health problem'}]
SELECT DISTINCT ?n WHERE { resource:LOC100289473 property:genetic_association ?n . ?n rdf:type ontology:health_problem }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q794026 Q7051181
P2175
Q8386
USER
Is norgestimate used for treatment of that health problem ?
(Q7051181,P2175,Q794026)
action is_in
entity Q7051181
action find
entity Q794026
relation P2175
['Q7051181', 'P2175', 'Q794026']
ASK WHERE { resource:Q794026 property:P2175 resource:Q7051181 }
Azoospermia norgestimate
action is_in
entity norgestimate
action find
entity Azoospermia
relation medical condition treated
['norgestimate', 'medical condition treated', 'Azoospermia']
ASK WHERE { resource:Azoospermia property:medical_condition_treated resource:norgestimate }
[]
drug
SYSTEM
NO
(Q7051181,P2175,Q794026)
action is_in
entity Q7051181
action find
entity Q794026
relation P2175
[ANSWER]
['Q7051181', 'P2175', 'Q794026']
ASK WHERE { resource:Q794026 property:P2175 resource:Q7051181 }
No
action is_in
entity norgestimate
action find
entity Azoospermia
relation medical condition treated
['norgestimate', 'medical condition treated', 'Azoospermia']
ASK WHERE { resource:Azoospermia property:medical_condition_treated resource:norgestimate }
[]