Simple Question (Direct)
Simple Question
Q21167093
P703
Q16521
USER
Which taxon is Trp operon repressor    CT_169 found in ?
(Q21167093,P703,c(Q16521))
action filter_type
action find
entity Q21167093
relation P703
type Q16521
['Q21167093', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?d WHERE { resource:Q21167093 property:P703 ?d . ?d rdf:type ontology:Q16521 }
Trp operon repressor    CT_169
action filter_type
action find
entity Trp operon repressor    CT_169
relation found in taxon
type taxon
['Trp operon repressor    CT_169', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?d WHERE { resource:Trp_operon_repressor____CT_169 property:found_in_taxon ?d . ?d rdf:type ontology:taxon }
[]
taxon
Q20800373
SYSTEM
Chlamydia trachomatis D/UW-3/CX
Q20800373
(Q21167093,P703,c(Q16521))
action filter_type
action find
entity Q21167093
relation P703
type Q16521
Trp operon repressor CT_169 is found in [ANSWER]
['Q21167093', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?d WHERE { resource:Q21167093 property:P703 ?d . ?d rdf:type ontology:Q16521 }
Chlamydia trachomatis D/UW-3/CX
Trp operon repressor CT_169 is found in Chlamydia trachomatis D/UW-3/CX
Chlamydia trachomatis D/UW-3/CX
action filter_type
action find
entity Trp operon repressor    CT_169
relation found in taxon
type taxon
['Trp operon repressor    CT_169', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?d WHERE { resource:Trp_operon_repressor____CT_169 property:found_in_taxon ?d . ?d rdf:type ontology:taxon }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21167093
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by Trp operon repressor    CT_169 ?
(c(Q863908),P688,Q21167093)
action filter_type
action find_reverse
entity Q21167093
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21167093']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q21167093 . ?p rdf:type ontology:Q863908 }
Trp operon repressor    CT_169
action filter_type
action find_reverse
entity Trp operon repressor    CT_169
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Trp operon repressor    CT_169']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:Trp_operon_repressor____CT_169 . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q21094686
SYSTEM
Trp operon repressor    CT_169
Q21094686
(c(Q863908),P688,Q21167093)
action filter_type
action find_reverse
entity Q21167093
relation P688
type Q863908
The nucleic acid sequence that is encoded by Trp operon repressor CT_169 is Trp operon repressor CT 169
[{'concept': 'Q863908'}, 'P688', 'Q21167093']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q21167093 . ?p rdf:type ontology:Q863908 }
Trp operon repressor    CT_169
The nucleic acid sequence that is encoded by Trp operon repressor CT_169 is Trp operon repressor CT 169
Trp operon repressor    CT_169
action filter_type
action find_reverse
entity Trp operon repressor    CT_169
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Trp operon repressor    CT_169']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:Trp_operon_repressor____CT_169 . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q20800373
P703
Q181394
USER
How many nutrients are found in the taxon Chlamydia trachomatis D/UW-3/CX ?
(c(Q181394),P703,Q20800373)
action count
action filter_type
action find_reverse
entity Q20800373
relation P703
type Q181394
[{'concept': 'Q181394'}, 'P703', 'Q20800373']
SELECT DISTINCT ( COUNT ( ?k ) AS ?a ) WHERE { ?k property:P703 resource:Q20800373 . ?k rdf:type ontology:Q181394 }
Chlamydia trachomatis D/UW-3/CX
action count
action filter_type
action find_reverse
entity Chlamydia trachomatis D/UW-3/CX
relation found in taxon
type nutrient
[{'concept': 'nutrient'}, 'found in taxon', 'Chlamydia trachomatis D/UW-3/CX']
SELECT DISTINCT ( COUNT ( ?k ) AS ?a ) WHERE { ?k property:found_in_taxon resource:Chlamydia_trachomatis_D/UW-3/CX . ?k rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
888
Q21168415 Q21174761 Q21153943 Q21156078 Q21156079 Q21168275 Q21168270 Q21174598 Q21174501 Q21174504 Q21174686 Q21094640 Q21174485 Q21174489 Q21174488 Q21166984 Q21166980 Q21166982 Q21167119 Q21168312 Q21168310 Q21168316 Q21168314 Q21168265 Q21168260 Q21168277 Q21168273 Q21167998 Q21167991 Q21167990 Q21167995 Q21167994 Q21174692 Q21174693 Q21153980 Q21153983 Q21153987 Q21153988 Q21174490 Q21166997 Q21166995 Q21166990 Q21167986 Q21167984 Q21167985 Q21167988 Q21167989 Q21167983 Q21168189 Q21094573 Q21174463 Q21174599 Q21174591 Q21174590 Q21174593 Q21174592 Q21174595 Q21174597 Q21174596 Q21174483 Q21174482 Q21174481 Q21174480 Q21174487 Q21174486 Q21174484 Q21168481 Q21174588 Q21174589 Q21174582 Q21174583 Q21174581 Q21174586 Q21174587 Q21174584 Q21174585 Q21168436 Q21174496 Q21174497 Q21174492 Q21174498 Q21156083 Q21156081 Q21156087 Q21166087 Q21167001 Q21156090 Q21168529 Q21168528 Q21168520 Q21168523 Q21168522 Q21168527 Q21168526 Q21168392 Q21168390 Q21163277 Q21168301 Q21168303 Q21168305 Q21168304 Q21168194 Q21168190 Q21168533 Q21168530 Q21168534 Q21168535 Q21168318 Q21168319 Q21168311 Q21168315 Q21168509 Q21168508 Q21168507 Q21168506 Q21168505 Q21168504 Q21168503 Q21168502 Q21168501 Q21168500 Q21153929 Q21153928 Q21153927 Q21153926 Q21153925 Q21153924 Q21168329 Q21168328 Q21168327 Q21168326 Q21168325 Q21168323 Q21168276 Q21168272 Q21168429 Q21168423 Q21168512 Q21168513 Q21168514 Q21168515 Q21168516 Q21168517 Q21168518 Q21168519 Q21153932 Q21153933 Q21153934 Q21153935 Q21153936 Q21153937 Q21153938 Q21153939 Q21166450 Q21168333 Q21168335 Q21168336 Q21168337 Q21168338 Q21168339 Q21205610 Q21174513 Q21174512 Q21174517 Q21174519 Q21168434 Q21153945 Q21153946 Q21153941 Q21153940 Q21153942 Q21166441 Q21166443 Q21167118 Q21167111 Q21167110 Q21167113 Q21167112 Q21167115 Q21167114 Q21167117 Q21167116 Q21168347 Q21168346 Q21168341 Q21168340 Q21168343 Q21168342 Q21168349 Q21168348 Q21065404 Q21065403 Q21156082 Q21156086 Q21156084 Q21156088 Q21174503 Q21174500 Q21174508 Q21174509 Q21153956 Q21153957 Q21153954 Q21153952 Q21153951 Q21153959 Q21167108 Q21167109 Q21167102 Q21167103 Q21167100 Q21167101 Q21167106 Q21167107 Q21167104 Q21167105 Q21168356 Q21168354 Q21168355 Q21168352 Q21168353 Q21168350 Q21168351 Q21168358 Q21168359 Q21167015 Q21174537 Q21174536 Q21174535 Q21174534 Q21174532 Q21174531 Q21174539 Q21153969 Q21153963 Q21153962 Q21153961 Q21153960 Q21153967 Q21153966 Q21153965 Q21153964 Q21174609 Q21174607 Q21168369 Q21168368 Q21168363 Q21168362 Q21168361 Q21168360 Q21168366 Q21168365 Q21168364 Q21174739 Q21174737 Q21174736 Q21174528 Q21174521 Q21174522 Q21174523 Q21174525 Q21174527 Q21153978 Q21153979 Q21153974 Q21153976 Q21153977 Q21153971 Q21153972 Q21153973 Q21166985 Q21166987 Q21166986 Q21166981 Q21166983 Q21166989 Q21166988 Q21167120 Q21167121 Q21167122 Q21167124 Q21167125 Q21167126 Q21168378 Q21168379 Q21168374 Q21168375 Q21168376 Q21168377 Q21168370 Q21168371 Q21168372 Q21168373 Q21174558 Q21174555 Q21174554 Q21174556 Q21174551 Q21174550 Q21174553 Q21174552 Q21153981 Q21153982 Q21153985 Q21153984 Q21153986 Q21166996 Q21166994 Q21166992 Q21166993 Q21166991 Q21166998 Q21166999 Q21167155 Q21167157 Q21167156 Q21167151 Q21167150 Q21167158 Q21168381 Q21168380 Q21168383 Q21168382 Q21168385 Q21168384 Q21168387 Q21168386 Q21168389 Q21168388 Q21168452 Q21168455 Q21174548 Q21174544 Q21174545 Q21174542 Q21174543 Q21174540 Q21174541 Q21168393 Q21168391 Q21168397 Q21168394 Q21168395 Q21168398 Q21168399 Q21174557 Q21174573 Q21174572 Q21174571 Q21174570 Q21174577 Q21174575 Q21174574 Q21174579 Q21174564 Q21174565 Q21174567 Q21174561 Q21174562 Q21174563 Q21174568 Q17126483 Q21167164 Q21167160 Q21167163 Q21168223 Q21167161 Q21168525 Q21168524 Q21174613 Q21174610 Q21174616 Q21166958 Q21166959 Q21168656 Q21168654 Q21168653 Q21168652 Q21168651 Q21168650 Q21166965 Q21166963 Q21166960 Q21166969 Q21167123 Q21168648 Q21168649 Q21168641 Q21168642 Q21168643 Q21168644 Q21168645 Q21168646 Q21168647 Q21168309 Q21168308 Q21168306 Q21167098 Q21167094 Q21167095 Q21167096 Q21167097 Q21167090 Q21167091 Q21167092 Q21167093 Q21168459 Q21168458 Q21168451 Q21168454 Q21168457 Q21168239 Q21168238 Q21168231 Q21168230 Q21168232 Q21168235 Q21168237 Q21166978 Q21166979 Q21166970 Q21166971 Q21166972 Q21166973 Q21166975 Q21166976 Q21166977 Q21168639 Q21168638 Q21168635 Q21168634 Q21168637 Q21168636 Q21168631 Q21168630 Q21168633 Q21174493 Q21168448 Q21168442 Q21168440 Q21168444 Q21168445 Q21168228 Q21168229 Q21168226 Q21168224 Q21166907 Q21168628 Q21168629 Q21168626 Q21168627 Q21168479 Q21168477 Q21168476 Q21168475 Q21168474 Q21168473 Q21168472 Q21168471 Q21168219 Q21168217 Q21168216 Q21168215 Q21168214 Q21168213 Q21168212 Q21168211 Q21168210 Q21168460 Q21168461 Q21168462 Q21168463 Q21168464 Q21168465 Q21168466 Q21168467 Q21168468 Q21168200 Q21168201 Q21168202 Q21168203 Q21168204 Q21168205 Q21168206 Q21168208 Q21168209 Q21168424 Q21168421 Q21168422 Q21166957 Q21149581 Q20760394 Q21168416 Q21168411 Q21168410 Q21168413 Q21168412 Q21168419 Q21168418 Q21153875 Q21153877 Q21153876 Q21153873 Q21153872 Q21153879 Q21153878 Q21168274 Q21168271 Q21168279 Q21168278 Q21168531 Q21174622 Q21174620 Q21167025 Q21167024 Q21167026 Q21167021 Q21167020 Q21167022 Q21168406 Q21168407 Q21168404 Q21168405 Q21168402 Q21168403 Q21168400 Q21168401 Q21168409 Q21168267 Q21168264 Q21168262 Q21168261 Q21168268 Q21168269 Q21168521 Q21168317 Q21168426 Q21168439 Q21168433 Q21168432 Q21168431 Q21168430 Q21168437 Q21168435 Q21168259 Q21168258 Q21168253 Q21168252 Q21168251 Q21168250 Q21168257 Q21168256 Q21168255 Q21168254 Q21168321 Q21167003 Q21167002 Q21167000 Q21167007 Q21167006 Q21167005 Q21167009 Q21167008 Q21168428 Q21168425 Q21168427 Q21168420 Q21168248 Q21168249 Q21168244 Q21168245 Q21168246 Q21168247 Q21168240 Q21168241 Q21168242 Q21168243 Q21167014 Q21167016 Q21167017 Q21167010 Q21167011 Q21167012 Q21167013 Q21167018 Q21167019 Q21174601 Q21174600 Q21174603 Q21174602 Q21174605 Q21174604 Q21168293 Q21174618 Q21174619 Q21174612 Q21174617 Q21174614 Q21174615 Q21166893 Q21166892 Q21166894 Q21174628 Q21174627 Q21174626 Q21174624 Q21174623 Q21166966 Q21166962 Q21166968 Q21174511 Q21174516 Q21153896 Q21153895 Q21153894 Q21153893 Q21153892 Q21153891 Q21153890 Q21168297 Q21168296 Q21168295 Q21168294 Q21168292 Q21168291 Q21168290 Q21168299 Q21168298 Q21174632 Q21174634 Q21174636 Q21167099 Q21153880 Q21153881 Q21153883 Q21153884 Q21153885 Q21153886 Q21153887 Q21168288 Q21168289 Q21168280 Q21168281 Q21168282 Q21168283 Q21168284 Q21168285 Q21168286 Q21168287 Q21168324 Q21168322 Q21174647 Q21174646 Q21174640 Q21174649 Q21174648 Q21168499 Q21168498 Q21168495 Q21168497 Q21168496 Q21168491 Q21168490 Q21168493 Q21174656 Q21174657 Q21174654 Q21174655 Q21174652 Q21174653 Q21174650 Q21174651 Q21174658 Q21174659 Q21168484 Q21168485 Q21168482 Q21168483 Q21168480 Q21153888 Q21153889 Q21153882 Q21168218 Q21168300 Q21168302 Q21168307 Q21174669 Q21174668 Q21174663 Q21174662 Q21174661 Q21174667 Q21174666 Q21174665 Q21174664 Q21153944 Q21168450 Q21168453 Q21168456 Q21168313 Q21166072 Q21166077 Q21174678 Q21174679 Q21174675 Q21174676 Q21174677 Q21174670 Q21174671 Q21174673 Q21168178 Q21168179 Q21168172 Q21168176 Q21168177 Q21168174 Q21168233 Q21168234 Q21168236 Q21168396 Q21166068 Q21166064 Q21174681 Q21174680 Q21174683 Q21174682 Q21174685 Q21174684 Q21174689 Q21174688 Q21167004 Q21166974 Q21153955 Q21153950 Q21168511 Q21153930 Q21153931 Q21174690 Q21174691 Q21174696 Q21174694 Q21174695 Q21174698 Q21174699 Q21167993 Q21167997 Q21167996 Q21168330 Q21168331 Q21168332 Q21168334 Q21168263 Q21168494 Q21168449 Q21168443 Q21168441 Q21168446 Q21168447 Q21174514 Q21166967 Q21166961 Q21168220 Q21168221 Q21168227 Q21168225 Q21174733 Q21174734 Q21167999 Q21167992 Q21174728 Q21174729 Q21174722 Q21174721 Q21174726 Q21174727 Q21174724 Q21174725 Q21153949 Q21153948 Q21174505 Q21174718 Q21174717 Q21174716 Q21174714 Q21174712 Q21174711 Q21174710 Q21168345 Q21168344 Q21174465 Q21174700 Q21174701 Q21174702 Q21174703 Q21174704 Q21174706 Q21174707 Q21174708 Q21174709 Q21149573 Q21149572 Q21149571 Q21149577 Q21149576 Q21149575 Q21168488 Q21168489 Q21168487 Q21174776 Q21174771 Q21174772 Q21168470 Q21174705 Q21174766 Q21174502 Q21174507 Q21149590 Q21174751 Q21174756 Q21168015 Q21149583 Q21149580 Q21149586 Q21149585 Q21149589 Q21168183 Q21168182 Q21168181 Q21168180 Q21168187 Q21168186 Q21168185 Q21168184 Q21168188 Q21174749 Q21174745 Q21174747 Q21153953 Q21153958 Q21168195 Q21168197 Q21168191 Q21168192 Q21168193 Q21168198 Q21168199 Q21168357 Q21166083 Q21174495 Q21174472 Q21174474 Q21168320 Q21167987 Q21166964 Q21168469 Q21065399 Q21174530 Q21168222 Q21174520 Q21168207 Q21174611 Q21168003 Q21168001 Q21168007 Q21168004 Q21168486 Q21174468 Q21174466 Q21168532 Q21168011 Q21168010 Q21168013 Q21168012 Q21168014 Q21168017 Q21168016 Q21168019 Q21168018 Q21174473 Q21174477 Q21174475 Q21168002 Q21168000 Q21168006 Q21168005 Q21168008 Q21168009 Q21168175
(c(Q181394),P703,Q20800373)
action count
action filter_type
action find_reverse
entity Q20800373
relation P703
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P703', 'Q20800373']
SELECT DISTINCT ( COUNT ( ?k ) AS ?a ) WHERE { ?k property:P703 resource:Q20800373 . ?k rdf:type ontology:Q181394 }
hypothetical protein    CT_736 hypothetical protein    CT_283 DNA polymerase III subunit epsilon    CT_261 DNA gyrase subunit A    CT_189 50S ribosomal protein L10    CT_317 hypothetical protein    CT_357 phospholipase    CT_158 DNA polymerase III subunit delta'    CT_187 preprotein translocase subunit SecE    CT_321 zinc metalloprotease    CT_072 tyrosine-specific transport protein    CT_818 hypothetical protein    CT_780 hypothetical protein    CT_565 DNA repair protein RecO    CT_470 inclusion membrane protein    CT_214 hypothetical protein    CT_244 histidine--tRNA ligase    CT_543 DNA recombination protein    CT_825 glycerol-3-phosphate dehydrogenase    CT_714 methionyl-tRNA formyltransferase    CT_530 hypothetical protein    CT_398 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase    CT_434 oligopeptide ABC transporter permease    CT_478 hypothetical protein    CT_794.1 recombination protein F    CT_074 deoxyuridine 5'-triphosphate nucleotidohydrolase    CT_292 penicillin-binding protein    CT_270 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase    CT_730 protein-arginine kinase activator protein    CT_676 aromatic amino acid aminotransferase    CT_637 oligopeptide ABC transporter ATP-binding protein    CT_690 exodeoxyribonuclease V subunit gamma    CT_640 nucleoside deaminase    CT_844 acetyl-CoA carboxylase carboxyltransferase subunit alpha    CT_265 nucleoid-associated protein    CT_335 hypothetical protein    CT_263 ABC transporter ATP-binding protein/permease    CT_264 outer membrane protein PmpA    CT_412 elongation factor P    CT_122 proline--tRNA ligase    CT_393 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA    CT_498 RNA pseudouridine synthase    CT_658 glutamate--tRNA ligase    CT_445 hypothetical protein    CT_160 hypothetical protein    CT_164 50S ribosomal protein L21    CT_420 chaperonin GroEL    CT_755 ABC transporter permease/substrate-binding protein    CT_854 hypothetical protein    CT_627 hypothetical protein    CT_018 penicillin-binding protein    CT_682 alanine--tRNA ligase    CT_749 hypothetical protein    CT_017 ABC transporter ATP-binding protein    CT_130 glycine cleavage system protein H    CT_282 signal recognition particle GTPase    CT_025 aminotransferase    CT_721 peptidyl-prolyl cis-trans isomerase    CT_541 SAM-dependent methyltransferase    CT_404 hypothetical protein    CT_873 outer membrane protein PmpC    CT_414 hypothetical protein    CT_665 elongation factor G    CT_437 lipoyl synthase    CT_558 peptidyl-tRNA hydrolase    CT_800 oligopeptide ABC transporter permease    CT_199 thioredoxin    CT_539 oligopeptide ABC transporter permease    CT_479 PTS fructose transporter subunit IIA    CT_290 hypothetical protein    CT_694 glutamate-1-semialdehyde-2,1-aminomutase    CT_210 pyruvate dehydrogenase E1 component subunit alpha    CT_245 hypothetical protein    CT_716 type III secretion system protein    CT_672 peptide chain release factor    CT_023 translation initiation factor IF-3    CT_833 DNA-directed RNA polymerase subunit beta'    CT_314 hypothetical protein    CT_848 glucose-6-phosphate isomerase    CT_378 hypothetical protein    CT_037 guanylate kinase    CT_030 thymidylate kinase    CT_188 50S ribosomal protein L22    CT_523 hypothetical protein    CT_754 N-acetylmuramoyl alanine amidase    CT_268 transcriptional regulator    CT_457 sodium:dicarboxylate symport protein    CT_401 exodeoxyribonuclease V subunit beta    CT_639 aspartate-semialdehyde dehydrogenase    CT_363 ATP-dependent DNA helicase    CT_608 Na(+)-translocating NADH-quinone reductase subunit E    CT_281 ribosome-binding factor A    CT_095 50S ribosomal protein L6    CT_514 hypothetical protein    CT_496.1 1,4-alpha-glucan branching protein    CT_866 hypothetical protein    CT_425 tyrosine recombinase XerC    CT_347 phosphatidylcholine-hydrolyzing phospholipase D    CT_155 hypothetical protein    CT_548 30S ribosomal protein S10    CT_436 malate dehydrogenase    CT_376 endonuclease IV    CT_625 membrane efflux protein    CT_641 excinuclease ABC subunit B    CT_586 30S ribosomal protein S14    CT_787 acetyl-CoA carboxylase biotin carboxylase subunit    CT_124 ATPase    CT_015 type III secretion system protein    CT_559 hypothetical protein    CT_670 hypothetical protein    CT_274 lipid II flippase MurJ    CT_624 hypothetical protein    CT_819 hypothetical protein    CT_552 outer membrane protein PmpF    CT_870 hypothetical protein    CT_109 Na(+)-translocating NADH-quinone reductase subunit A    CT_634 queuine tRNA ribosyltransferase    CT_193 hypothetical protein    CT_035 hypothetical protein    CT_838 2-oxoglutarate dehydrogenase complex subunit dihydrolipoyllysine-residue succinyltransferase    CT_055 30S ribosomal protein S18    CT_802 outer membrane protein PmpB    CT_413 DNA primase    CT_794 hypothetical protein    CT_179 hypothetical protein    CT_472 hypothetical protein    CT_444.1 bifunctional 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate synthase    CT_613 ribonuclease Z    CT_346 3-oxoacyl-ACP synthase III    CT_239 V-type ATP synthase subunit E    CT_310 hypothetical protein    CT_847 hypothetical protein    CT_253 oligopeptide ABC transporter substrate-binding protein    CT_139 hypothetical protein    CT_720 50S ribosomal protein L35    CT_834 hypothetical protein    CT_203 hypothetical protein    CT_654 hypothetical protein    CT_385 DNA polymerase I    CT_493 recombinase RecA    CT_650 ATPase/kinase    CT_537 DNA gyrase subunit B    CT_190 translation initiation factor IF-1    CT_323 glycogen phosphorylase    CT_248 hypothetical protein    CT_255 DNA polymerase III subunit alpha    CT_545 tRNA dimethylallyltransferase    CT_766 superoxide dismutase    CT_294 site-specific tyrosine recombinase XerD    CT_864 hypothetical protein    CT_149 hypothetical protein    CT_795 ADP, ATP carrier protein    CT_495 septum formation protein Maf    CT_349 exodeoxyribonuclease V subunit alpha    CT_033 type III secretion chaperone    CT_088 30S ribosomal protein S19    CT_524 succinate dehydrogenase iron sulfur subunit    CT_591 deubiquitinase    CT_867 50S ribosomal protein L23    CT_526 farnesyl diphosphate synthase    CT_628 insulinase/protease    CT_806 NAD-dependent DNA ligase LigA    CT_146 preprotein translocase subunit SecD/SecF    CT_448 hypothetical protein    CT_853 hypothetical protein    CT_049 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase    CT_756 DNA-binding protein HU    CT_267 hypothetical protein    CT_668 hypothetical protein    CT_466 50S ribosomal protein L29    CT_520 DNA topoisomerase I    CT_643 uridylate kinase    CT_678 hypothetical protein    CT_143 DNA repair protein RadA    CT_298 hypothetical protein    CT_388 50S ribosomal protein L24    CT_517 heat-inducible transcription repressor    CT_394 uroporphyrinogen decarboxylase    CT_747 DNA topoisomerase IV subunit B    CT_661 ribulose-phosphate 3-epimerase    CT_121 threonine--tRNA ligase    CT_581 2-oxoglutarate dehydrogenase subunit E1    CT_054 Zn-dependent peptidase    CT_824 virulence protein CADD    CT_610 hydrolase    CT_594 glutamate/gamma-aminobutyrate antiporter    CT_216 phospholipase-carboxylesterase family protein    CT_136 phenylalanine--tRNA ligase subunit alpha    CT_836 endoribonuclease    CT_422 hypothetical protein    CT_846 hypothetical protein    CT_038 ABC transporter substrate-binding protein    CT_067 ribonuclease R    CT_397 muramidase    CT_759 hypothetical protein    CT_647 isoleucine--tRNA ligase    CT_019 hypothetical protein    CT_326 hypothetical protein    CT_351 50S ribosomal protein L20    CT_835 glycine--tRNA ligase    CT_796 threonylcarbamoyl-AMP synthase    CT_137 ABC transporter permease    CT_129 deubiquitinase    CT_868 2-oxoisovalerate dehydrogenase subunit alpha/beta    CT_340 hypothetical protein    CT_134 hypothetical protein    CT_741 50S ribosomal protein L13    CT_125 O-sialoglycoprotein endopeptidase    CT_343 50S ribosomal protein L15    CT_511 ABC transporter ATP-binding protein    CT_068 hypothetical protein    CT_421 GTPase    CT_092 50S ribosomal protein L36    CT_786 hypothetical protein    CT_744 hypothetical protein    CT_529 stress response protein GrpE    CT_395 hypothetical protein    CT_642 thiamine biosynthesis lipoprotein    CT_077 co-chaperonin GroES    CT_111 hypothetical protein    CT_429 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase    CT_797 type II secretion system protein    CT_674 UDP-3-O-acylglucosamine N-acyltransferase    CT_243 lipid II flippase FtsW    CT_760 glycogen hydrolase    CT_042 recombination protein RecR    CT_240 6-phosphogluconolactonase    CT_186 hypothetical protein    CT_664 riboflavin synthase    CT_405 leucine dehydrogenase    CT_773 glucose-1-phosphate adenyltransferase    CT_489 serine phosphatase RsbU    CT_588 hypothetical protein    CT_159 hypothetical protein    CT_330 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase    CT_462 phosphatidate cytidylyltransferase    CT_451 hypothetical protein    CT_392 late transcription unit protein B    CT_080 hypothetical protein    CT_465 hypothetical protein    CT_556 hypothetical protein    CT_538 hypothetical protein    CT_442 ribonuclease HII    CT_008 phosphoenolpyruvate-protein phosphotransferase    CT_336 magnesium transport protein    CT_194 phospholipase    CT_157 hypothetical protein    CT_053 DNA polymerase III subunit epsilon    CT_536 hypothetical protein    CT_191 ATP-dependent Clp protease proteolytic subunit    CT_431 branched-chain amino acid transport system carrier protein    CT_554 trigger factor    CT_707 inclusion membrane protein    CT_196 phospholipase    CT_084 translocated actin-recruiting phosphoprotein CT_456 rod shape-determining protein MreB    CT_709 diaminopimelate epimerase    CT_430 arginine/agmatine antiporter    CT_374 Crp family transcriptional regulator    CT_235 50S ribosomal protein L19    CT_028 sulfate transporter    CT_856 hypothetical protein    CT_142 hypothetical protein    CT_568 hypothetical protein    CT_384 outer membrane protein PmpI    CT_874 inclusion membrane protein A    CT_119 hypothetical protein    CT_211 GTPase Der    CT_703 phosphoshikimate 1-carboxyvinyltransferase    CT_366 30S ribosomal protein S3    CT_522 Fe-S metabolism protein SufE    CT_325 pyrophosphate--fructose 6-phosphate 1-phosphotransferase    CT_205 crossover junction endodeoxyribonuclease RuvC    CT_502 lipoate protein ligase    CT_285 ABC transporter permease    CT_069 hypothetical protein    CT_161 MAC/perforin family protein    CT_153 hypothetical protein    CT_296 hypothetical protein    CT_484 hypothetical protein    CT_875 holo-[acyl-carrier-protein] synthase    CT_100 lipoprotein OmcA    CT_444 aspartyl/glutamyl-tRNA amidotransferase subunit C    CT_002 valine--tRNA ligase    CT_302 bifunctional riboflavin kinase/FMN adenylyltransferase    CT_093 3-hydroxyacyl-ACP dehydratase    CT_532 elongation factor Tu    CT_322 oligoendopeptidase F    CT_112 GTPase Obg    CT_418 CTP synthetase    CT_183 ribonucleoside-diphosphate reductase subunit beta    CT_828 hypothetical protein    CT_605 serine--tRNA ligase    CT_729 Na(+)-translocating NADH-quinone reductase subunit B    CT_278 oligopeptide ABC transporter ATP-binding protein    CT_202 D-alanyl-D-alanine carboxypeptidase    CT_551 acetyltransferase    CT_458 hypothetical protein    CT_767 phosphocarrier protein Hpr    CT_337 ubiquinone/menaquinone biosynthesis protein    CT_427 pyruvate dehydrogenase E1 component subunit beta    CT_246 hypothetical protein    CT_011 aspartokinase    CT_362 6,7-dimethyl-8-ribityllumazine synthase    CT_732 tryptophan synthase subunit alpha    CT_171 phosphatidylserine decarboxylase    CT_699 Pet112    CT_004 type II secretion system protein E    CT_571 hypothetical protein    CT_156 hypothetical protein    CT_012 hypothetical protein    CT_326.1 succinyl-CoA ligase subunit beta    CT_821 serine/threonine protein kinase RsbW    CT_549 helicase    CT_555 outer membrane protein    CT_242 3-dehydroquinate synthase    CT_369 rRNA methyltransferse    CT_742 hypothetical protein    CT_635 hypothetical protein    CT_168 hypothetical protein    CT_212 ribonuclease P protein component    CT_784 CDP-diacylglycerol--serine O-phosphatidyltransferase    CT_826 metal-dependent hydrolase    CT_380 gamma-glutamyl ligase    CT_611 phosphate permease    CT_692 translocation protein TolB    CT_599 tRNA (cytidine(34)-2'-O)-methyltransferase    CT_540 ABC transporter substrate-binding protein    CT_391 hypothetical protein    CT_504 carbohydrate isomerase    CT_399 hypothetical protein    CT_047 hypothetical protein    CT_503 acyl-CoA thioesterase    CT_535 Lon protease    CT_344 hypothetical protein    CT_865 hypothetical protein    CT_039.1 hypothetical protein    CT_683 hypothetical protein    CT_620 tRNA-dihydrouridine synthase    CT_644 release factor glutamine methyltransferase    CT_024 hypothetical protein    CT_623 type III secretion system ATP synthase    CT_717 serine hydroxymethyltransferase    CT_432 hypothetical protein    CT_481 hypothetical protein    CT_288 menaquinone biosynthesis protein    CT_426 hypothetical protein    CT_162 AMP nucleosidase    CT_751 SpoU family rRNA methylase    CT_403 inclusion membrane protein    CT_192 sodium:sulfate symporter    CT_204 virulence protein GP6-D    CT_583 V-type ATP synthase subunit alpha    CT_308 type III secretion system chaperone    CT_663 biopolymer transport protein    CT_596 hypothetical protein    CT_249 tryptophan--tRNA ligase    CT_585 primosomal protein N'    CT_778 tRNA (guanine N-1) methyltransferase    CT_027 hypothetical protein    CT_163 preprotein translocase subunit SecY    CT_510 translocated actin-recruiting phosphoprotein hypothetical protein    CT_273 30S ribosomal protein S16    CT_026 hypothetical protein    CT_700 hypothetical protein    CT_632 shikimate kinase    CT_367 carboxy-terminal processing protease    CT_441 hypothetical protein    CT_809 membrane transport/efflux protein    CT_034 lipoprotein signal peptidase    CT_408 lipoprotein releasing system ABC transporter permease    CT_151 V-type ATP synthase subunit I    CT_305 30S ribosomal protein S5    CT_512 histone H1-like protein    CT_743 hypothetical protein    CT_271 type III secretion system protein    CT_564 chromosomal replication initiation protein DnaA    CT_250 4-hydroxy-3-methylbut-2-enyl diphosphate reductase    CT_859 methyltransferase    CT_553 hypothetical protein    CT_482 hypothetical protein    CT_309 3-deoxy-D-manno-octulosonic acid transferase    CT_208 hypothetical protein    CT_852 V-type ATP synthase subunit D    CT_306 hypothetical protein    CT_598 serine/threonine protein kinase    CT_673 type II secretion system protein F    CT_570 hypothetical protein    CT_446 phospholipase D    CT_284 chaperone protein DnaK    CT_396 type III secretion system translocator CopB2    CT_861 ABC transporter ATP-binding protein    CT_653 transketolase    CT_750 hypothetical protein    CT_602 S-adenosylmethionine/S-adenosylhomocysteine transporter    CT_580 deoxycytidine triphosphate deaminase    CT_039 FAD-dependent monooxygenase    CT_148 RNA pseudouridine synthase    CT_723 hypothetical protein    CT_783 pyruvoyl-dependent arginine decarboxylase    CT_373 hypothetical protein    CT_449 hypothetical protein    CT_469 glycerol-3-phosphate acyltransferase    CT_807 hypothetical protein    CT_737 Trp operon repressor    CT_169 hypothetical protein    CT_081 FeS assembly protein SufD    CT_686 ABC transporter ATP-binding protein    CT_180 hypothetical protein    CT_338 hypothetical protein    CT_355 peptide chain release factor 2    CT_459 excinuclease ABC subunit A    CT_333 DNA topoisomerase IV subunit A    CT_660 hypothetical protein    CT_621 hypothetical protein    CT_082 hypothetical protein    CT_793 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II    CT_731 oligopeptide ABC transporter substrate-binding lipoprotein    CT_480 hypothetical protein    CT_433 50S ribosomal protein L32    CT_810 Na(+)-translocating NADH-quinone reductase subunit D    CT_280 inclusion membrane protein E    CT_116 inclusion membrane protein    CT_228 inclusion membrane protein    CT_229 hypothetical protein    CT_221 50S ribosomal protein L3    CT_528 elongation factor TS    CT_679 dihydrofolate reductase    CT_612 50S ribosomal protein L31 type B    CT_022 DNA-directed RNA polymerase subunit alpha    CT_507 excinuclease ABC subunit C    CT_791 hypothetical protein    CT_718 type III secretion low calcium response chaperone    CT_576 phosphoglucosamine mutase    CT_815 hypothetical protein    CT_839 RNA polymerase sigma-54 factor    CT_609 hypothetical protein    CT_266 low calcium response protein D    CT_090 chorismate synthase    CT_368 hypothetical protein    CT_546 hypothetical protein    CT_560 3-deoxy-7-phosphoheptulonate synthase    CT_382 hypothetical protein    CT_648 nucleoside diphosphate kinase    CT_500 hypothetical protein    CT_814.1 UDP-2,3-diacylglucosamine pyrophosphohydrolase    CT_461 tRNA(Ile)-lysidine synthase    CT_840 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase    CT_761 L,L-diaminopimelate aminotransferase    CT_390 hypothetical protein    CT_021 50S ribosomal protein L28    CT_086 peptidoglycan-associated lipoprotein    CT_600 hypothetical protein    CT_728 30S ribosomal protein S13    CT_509 disulfide oxidoreductase    CT_176 ferredoxin    CT_059 menaquinone biosynthesis protein    CT_262 oxidoreductase    CT_375 50S ribosomal protein L1    CT_318 hypothetical protein    CT_083 50S ribosomal protein L33    CT_150 enolase    CT_587 oligopeptide ABC transporter substrate-binding protein    CT_198 cysteine--tRNA ligase    CT_782 transcription termination/antitermination protein NusA    CT_097 cysteine desulfurase activator complex subunit SufB    CT_684 thiol:disulfide Interchange protein    CT_595 leucine--tRNA ligase    CT_209 hypothetical protein    CT_863 tyrosine--tRNA ligase    CT_062 hypothetical protein    CT_845 hypothetical protein    CT_814 8-amino-7-oxononanoate synthase    CT_777 4-hydroxy-tetrahydrodipicolinate synthase    CT_361 hypothetical protein    CT_387 bifunctional UDP-N-acetylmuramate--L-alanine ligase/D-alanine--D-alanine ligase    CT_762 biotin--protein ligase    CT_725 inclusion membrane protein G    CT_118 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase    CT_078 hypothetical protein    CT_058 type III secretion system protein    CT_091 type III secretion system protein    CT_561 inclusion membrane protein    CT_224 inclusion membrane protein D    CT_115 hypothetical protein    CT_753 50S ribosomal protein L17    CT_506 serine/threonine-protein kinase    CT_301 hypothetical protein    CT_357R lipoate-protein ligase A    CT_499 hypothetical protein    CT_631 major outer membrane porin    CT_681 delta-aminolevulinic acid dehydratase    CT_633 hypothetical protein    CT_131 ABC transporter ATP-binding protein    CT_685 inclusion membrane protein C    CT_233 hypothetical protein    CT_051 methionine--tRNA ligase    CT_032 30S ribosomal protein S2    CT_680 hypothetical protein    CT_421.2 hypothetical protein    CT_695 ribonuclease III    CT_297 ribosomal RNA small subunit methyltransferase H    CT_272 hypothetical protein    CT_105 endonuclease III    CT_697 succinyl-CoA ligase subunit alpha    CT_822 prolipoprotein diacylglycerol transferase    CT_252 tRNA pseudouridine synthase A    CT_463 type II secretion system protein D    CT_572 inclusion membrane protein    CT_223 peptide deformylase    CT_353 dephospho-CoA kinase    CT_492 hypothetical protein    CT_657 outer membrane protein    CT_241 histone-like protein    CT_046 GTPase HflX    CT_379 triosephosphate isomerase    CT_328 hypothetical protein    CT_577 hypothetical protein    CT_779 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase    CT_370 hypothetical protein    CT_590 50S ribosomal protein L16    CT_521 glycogen synthase    CT_798 protein-arginine kinase    CT_675 succinate dehydrogenase flavoprotein subunit    CT_592 aminopeptidase    CT_574 ABC transporter ATP-binding protein    CT_689 hypothetical protein    CT_345 hypothetical protein    CT_140 hypothetical protein    CT_768 hypothetical protein    CT_195 dihydroneopterin aldolase    CT_614 pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase component    CT_247 hypothetical protein    CT_311 hypothetical protein    CT_805 hypothetical protein    CT_474 hypothetical protein    CT_476 4-hydroxy-tetrahydrodipicolinate reductase    CT_364 A/G-specific adenine glycosylase    CT_107 serine protease    CT_823 type III secretion system translocator CopD2    CT_860 30S ribosomal protein S12    CT_439 hypothetical protein    CT_435 hypothetical protein    CT_724 signal peptidase I    CT_020 ATP-dependent Clp protease ATP-binding subunit ClpX    CT_705 ABC-F family ATPase    CT_348 hypothetical protein    CT_490 outer membrane protein PmpD    CT_812 DNA polymerase III subunit gamma and tau    CT_334 single-stranded DNA-binding protein    CT_044 30S ribosomal protein S21    CT_342 sodium-dependent amino acid transporter    CT_231 type II secretion system protein G    CT_569 SAM-dependent methyltransferase    CT_048 1-deoxy-D-xylulose-5-phosphate synthase    CT_331 ParA family chromosome partitioning ATPase    CT_582 4-diphosphocytidyl-2C-methyl-D-erythritol kinase    CT_804 hypothetical protein    CT_573 hypothetical protein    CT_135 hypothetical protein    CT_257 6-phosphogluconate dehydrogenase    CT_063 hypothetical protein    CT_656 30S ribosomal protein S7    CT_438 hypothetical protein    CT_849 50S ribosomal protein L25/general stress protein Ctc    CT_799 hypothetical protein    CT_165 two component system response regulator    CT_468 type III secretion low calcium response chaperone    CT_862 hypothetical protein    CT_667 hypothetical protein    CT_702 hypothetical protein    CT_386 RNA polymerase sigma factor    CT_615 tRNA pseudouridine synthase A    CT_106 hypothetical protein    CT_103 preprotein translocase SecA    CT_141 hypothetical protein    CT_066 apolipoprotein N-acyltransferase    CT_534 ribonucleoside-diphosphate reductase subunit alpha    CT_827 glyceraldehyde-3-phosphate dehydrogenase    CT_505 translation initiation factor IF-2    CT_096 UDP-N-acetylenolpyruvoylglucosamine reductase    CT_831 DNA mismatch repair protein    CT_575 coproporphyrinogen-III oxidase    CT_052 hypothetical protein    CT_711 N-(5'-phosphoribosyl)anthranilate isomerase    CT_327 methyltransferase    CT_487 Na(+)-translocating NADH-quinone reductase subunit C    CT_279 V-type ATP synthase subunit beta    CT_307 hypothetical protein    CT_172 exodeoxyribonuclease VII large subunit    CT_329 chromosome partitioning protein ParB    CT_688 50S ribosomal protein L18    CT_513 inclusion membrane protein    CT_226 Holliday junction DNA helicase RuvA    CT_501 50S ribosomal protein L34    CT_785 demethylmenaquinone methyltransferase    CT_428 30S ribosomal protein S8    CT_515 elongation factor 4    CT_064 elongation factor P    CT_752 two component system sensor histidine kinase    CT_467 hypothetical protein    CT_173 acyltransferase    CT_010 type III secretion system chaperone    CT_043 protein phosphatase    CT_259 oligopeptide ABC transporter ATP-binding protein    CT_201 50S ribosomal protein L27    CT_419 hypothetical protein    CT_789 hypothetical protein    CT_659 hypothetical protein    CT_127 30S ribosomal protein S1    CT_098 tryptophan synthase subunit beta    CT_170 membrane protein insertase    CT_251 DNA polymerase III subunit beta    CT_075 hypothetical protein    CT_312 hypothetical protein    CT_483 enoyl-(acyl carrier protein) reductase    CT_104 hypothetical protein    CT_691 3'(2'),5'-bisphosphate nucleotidase    CT_774 protease    CT_494 50S ribosomal protein L2    CT_525 hypothetical protein    CT_666 phosphate acyltransferase    CT_811 type III secretion system translocator CopB    CT_578 Na+/alanine symporter    CT_735 malonyl-CoA-[acyl-carrier-protein] transacylase    CT_238 non-canonical purine NTP pyrophosphatase    CT_606 tRNA N6-adenosine threonylcarbamoyltransferase    CT_197 hypothetical protein    CT_108 50S ribosomal protein L11    CT_319 hypothetical protein    CT_360 30S ribosomal protein S4    CT_626 thioredoxin reductase    CT_099 low calcium response protein E    CT_089 hypothetical protein    CT_073 hypothetical protein    CT_254 hypothetical protein    CT_217 polyribonucleotide nucleotidyltransferase    CT_842 outer membrane protein    CT_371 isoprenyl transferase    CT_450 hypothetical protein    CT_616 UDP-N-acetylglucosamine pyrophosphorylase    CT_715 acetyl-CoA carboxylase carboxyltransferase subunit beta    CT_293 RNA polymerase sigma factor sigma-28    CT_061 hypothetical protein    CT_036 inclusion membrane protein    CT_227 hypothetical protein    CT_016 hypothetical protein    CT_166 type III secretion system effector protein    CT_712 glutamine--fructose-6-phosphate aminotransferase    CT_816 hypothetical protein    CT_120 tyrosine-specific transport protein    CT_817 exodeoxyribonuclease V subunit alpha    CT_652 hypothetical protein    CT_234 hypothetical protein    CT_356 poly A polymerase    CT_410 rRNA methylase    CT_830 hypothetical protein    CT_339 cysteine desulfurase    CT_687 hypothetical protein    CT_651 tRNA modification GTPase    CT_698 transaldolase    CT_313 hypothetical protein    CT_114 oligopeptide ABC transporter substrate-binding protein    CT_175 cytochrome D ubiquinol oxidase subunit II    CT_014 type III secretion system protein    CT_563 biopolymer transport protein    CT_597 hypothetical protein    CT_289 hypothetical protein    CT_550 acyl carrier protein    CT_236 anti-sigma F factor antagonist    CT_424 HAD superfamily hydrolase    CT_464 DNA-directed RNA polymerase subunit beta    CT_315 ATP synthase    CT_669 hypothetical protein    CT_567 hypothetical protein    CT_589 anti-sigma F factor antagonist    CT_765 cytochrome D ubiquinol oxidase subunit I    CT_013 transcription termination factor    CT_491 Holliday junction resolvase    CT_184 hypothetical protein    CT_480.1 hypothetical protein    CT_383 aromatic acid decarboxylase    CT_220 hypothetical protein    CT_733 inorganic pyrophosphatase    CT_772 hypothetical protein    CT_006 hypothetical protein    CT_041 phosphohydrolase    CT_488 hypothetical protein    CT_350 hypothetical protein    CT_440 30S ribosomal protein S6    CT_801 4-alpha glucanotransferase    CT_087 metal transporting ATPase    CT_727 DNA-binding protein    CT_009 hypothetical protein    CT_837 30S ribosomal protein S9    CT_126 metal ABC transporter ATP-binding protein    CT_416 polymer-forming cytoskeletal protein    CT_276 hypothetical protein    CT_172.1 chaperonin GroEL    CT_110 arginine--tRNA ligase    CT_454 phospho-N-acetylmuramoyl-pentapeptide-transferase    CT_757 hypothetical protein    CT_007 pyruvate kinase    CT_332 hypothetical protein    CT_473 hypothetical protein    CT_260 uracil DNA glycosylase    CT_607 aspartate--tRNA(Asp/Asn) ligase    CT_542 hypothetical protein    CT_300 cytosol aminopeptidase    CT_045 hypothetical protein    CT_763 hypothetical protein    CT_303 hypothetical protein    CT_790 hypothetical protein    CT_147 fumarate hydratase    CT_855 outer membrane protein PmpH    CT_872 hypothetical protein    CT_460 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase    CT_722 metal ABC transporter permease    CT_417 3-oxoacyl-[acyl-carrier-protein] reductase    CT_237 chromosomal replication initiation protein    CT_275 hypothetical protein    CT_652.1 single-stranded-DNA-specific exonuclease    CT_447 Na(+)/H(+) antiporter    CT_857 hypothetical protein    CT_389 porphobilinogen deaminase    CT_299 hypothetical protein    CT_359 sodium:dicarboxylate symport protein    CT_230 transcription termination/antitermination protein NusG    CT_320 ABC transporter permease    CT_070 RNA polymerase-binding transcription factor    CT_407 hypothetical protein    CT_102 methyltransferase    CT_133 1-acyl-sn-glycerol-3-phosphate acyltransferase    CT_775 hypothetical protein    CT_646 transcription elongation factor GreA    CT_636 decarboxylase    CT_085 hypothetical protein    CT_788 DNA methyltransferase    CT_477 50S ribosomal protein L7/L12    CT_316 transcriptional repressor NrdR    CT_406 aspartyl/glutamyl-tRNA amidotransferase subunit A    CT_003 thioredoxin peroxidase    CT_603 UDP-N-acetylglucosamine 1-carboxyvinyltransferase    CT_455 microsomal dipeptidase    CT_138 pyrophosphate--fructose 6-phosphate 1-phosphotransferase    CT_207 lipid A disaccharide synthase    CT_411 inclusion membrane protein    CT_813 type III secretion system protein    CT_060 hypothetical protein    CT_618 5-formyltetrahydrofolate cyclo-ligase    CT_649 hypothetical protein    CT_423 transcription-repair coupling factor    CT_748 tRNA (guanine-N(7)-)-methyltransferase    CT_829 hypothetical protein    CT_326.2 metal ABC transporter substrate-binding protein    CT_415 helicase    CT_708 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit    CT_123 ATP-dependent Clp protease ATP-binding subunit ClpC    CT_286 hypothetical protein    CT_167 hydrolase    CT_771 hypothetical protein    CT_365 outer membrane protein PmpE    CT_869 outer membrane protein PmpG    CT_871 1-deoxy-D-xylulose 5-phosphate reductoisomerase    CT_071 cell division protein    CT_726 hypothetical protein    CT_858 hypothetical protein    CT_471 hypothetical protein    CT_277 lipoprotein releasing system ABC transporter ATP-binding protein    CT_152 hypothetical protein    CT_256 ATP-dependent Clp protease proteolytic subunit    CT_706 V-type ATP synthase subunit K    CT_304 signal recognition particle receptor FtsY    CT_820 SsrA-binding protein    CT_076 type III secretion system translocator CopD    CT_579 hypothetical protein    CT_101 ATP-dependent zinc metalloprotease FtsH    CT_841 hypothetical protein    CT_174 glutamyl-tRNA reductase    CT_662 inclusion membrane protein    CT_225 oligopeptide ABC transporter permease    CT_200 hypothetical protein    CT_764 hypothetical protein    CT_358 phosphoglucomutase    CT_295 ribose-5-phosphate isomerase A    CT_213 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase    CT_533 hypothetical protein    CT_005 hypothetical protein    CT_421.1 cysteine desulfurase    CT_258 hypothetical protein    CT_352 coproporphyrinogen-III oxidase    CT_746 5'-nucleotidase SurE    CT_218 poly A polymerase    CT_704 2-dehydro-3-deoxyphosphooctonate aldolase    CT_655 inclusion membrane protein F    CT_117 lipoprotein    CT_734 hypothetical protein    CT_645 hypothetical protein    CT_056 hypothetical protein    CT_324 30S ribosomal protein S11    CT_508 3-oxoacyl-ACP synthase    CT_770 hypothetical protein    CT_566 hypothetical protein    CT_031 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)    CT_057 hypothetical protein    CT_606.1 hypothetical protein    CT_154 50S ribosomal protein L9    CT_803 tRNA-specific 2-thiouridylase MnmA    CT_287 adenylate kinase    CT_128 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase    CT_531 type III secretion system protein    CT_562 outer membrane protein B    CT_713 hypothetical protein    CT_050 DNA translocase FtsK    CT_739 transcription termination factor NusB    CT_832 ribonuclease HII    CT_029 serine/threonine protein kinase    CT_145 tRNA pseudouridine synthase B    CT_094 chaperone protein DnaJ    CT_341 acyltransferase    CT_206 50S ribosomal protein L5    CT_516 late transcription unit protein A    CT_377 replicative DNA helicase    CT_497 hexose phosphate transport protein    CT_544 cytidylate kinase    CT_452 ribonuclease E    CT_808 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase    CT_269 hypothetical protein    CT_601 transcriptional regulator    CT_630 hypothetical protein    CT_496 hypothetical protein    CT_177 hypothetical protein    CT_547 porin    CT_372 ABC transporter substrate-binding protein    CT_486 hypothetical protein    CT_132 phosphoenolpyruvate carboxykinase    CT_710 hypothetical protein    CT_850 branched-chain alpha-keto acid dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase    CT_400 50S ribosomal protein L4    CT_527 phosphoglycerate kinase    CT_693 hypothetical protein    CT_382.1 DNA mismatch repair protein MutS    CT_792 ferrochelatase    CT_485 30S ribosomal protein S15    CT_843 sodium/alanine symporter    CT_409 preprotein translocase subunit SecA    CT_701 hypothetical protein    CT_619 hypothetical protein    CT_079 hypothetical protein    CT_178 1,6-fructose bisphosphate aldolase    CT_215 Na(+)-translocating NADH-quinone reductase subunit F    CT_740 type III secretion system protein    CT_719 2-oxoglutarate dehydrogenase complex dihydrolipoyl dehydrogenase    CT_557 UDP-N-acetylmuramoylalanine--D-glutamate ligase    CT_758 hypothetical protein    CT_001 3-deoxy-manno-octulosonate cytidylyltransferase    CT_182 4-hydroxybenzoate octaprenyltransferase    CT_219 chaperonin GroEL    CT_604 phenylalanine--tRNA ligase subunit beta    CT_475 glucose-6-phosphate 1-dehydrogenase    CT_185 hypothetical protein    CT_144 hypothetical protein    CT_181 chaperone protein ClpB    CT_113 lysine--tRNA ligase    CT_781 30S ribosomal protein S17    CT_519 inclusion membrane protein B    CT_232 ribosomal RNA small subunit methyltransferase A    CT_354 PTS fructose transporter subunit IIA    CT_291 hypothetical protein    CT_622 ribosome silencing factor    CT_769 ADP, ATP carrier protein    CT_065 Zn-dependent hydrolase    CT_738 hypothetical protein    CT_849.1 hypothetical protein    CT_584 Holliday junction DNA helicase RuvB    CT_040 arginine ABC transporter substrate-binding protein ArtJ    CT_381 outer membrane protein OmcB    CT_443 methionine aminopeptidase    CT_851 ribosome recycling factor    CT_677 1-acyl-sn-glycerol-3-phosphate acyltransferase    CT_453 tetraacyldisaccharide 4' kinase    CT_402 protoporphyrinogen oxidase    CT_745 30S ribosomal protein S20    CT_617 50S ribosomal protein L14    CT_518 hypothetical protein    CT_671 long chain fatty acid--[acyl-carrier-protein] ligase    CT_776 hypothetical protein    CT_696
888
action count
action filter_type
action find_reverse
entity Chlamydia trachomatis D/UW-3/CX
relation found in taxon
type nutrient
[{'concept': 'nutrient'}, 'found in taxon', 'Chlamydia trachomatis D/UW-3/CX']
SELECT DISTINCT ( COUNT ( ?k ) AS ?a ) WHERE { ?k property:found_in_taxon resource:Chlamydia_trachomatis_D/UW-3/CX . ?k rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21167093
P681
Q15989253
USER
Which is the part that is a component of Trp operon repressor    CT_169 ?
(Q21167093,P681,c(Q15989253))
action filter_type
action find
entity Q21167093
relation P681
type Q15989253
['Q21167093', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q21167093 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
Trp operon repressor    CT_169
action filter_type
action find
entity Trp operon repressor    CT_169
relation cell component
type part
['Trp operon repressor    CT_169', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:Trp_operon_repressor____CT_169 property:cell_component ?e . ?e rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q21167093,P681,c(Q15989253))
action filter_type
action find
entity Q21167093
relation P681
type Q15989253
[ANSWER] is the part that is a component of Trp operon repressor CT_169
['Q21167093', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q21167093 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
cytoplasm
Cytoplasm is the part that is a component of Trp operon repressor CT_169
cytoplasm
action filter_type
action find
entity Trp operon repressor    CT_169
relation cell component
type part
['Trp operon repressor    CT_169', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:Trp_operon_repressor____CT_169 property:cell_component ?e . ?e rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21992211
Q15989253
USER
And how about Tumor necrosis factor alpha-induced protein 8-like protein 3?
(Q21992211,P681,c(Q15989253))
action filter_type
action find
entity Q21992211
relation P681
type Q15989253
['Q21992211', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { resource:Q21992211 property:P681 ?h . ?h rdf:type ontology:Q15989253 }
Tumor necrosis factor alpha-induced protein 8-like protein 3
action filter_type
action find
entity Tumor necrosis factor alpha-induced protein 8-like protein 3
relation cell component
type part
['Tumor necrosis factor alpha-induced protein 8-like protein 3', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { resource:Tumor_necrosis_factor_alpha-induced_protein_8-like_protein_3 property:cell_component ?h . ?h rdf:type ontology:part }
[]
part
Q79899 Q14349455
SYSTEM
cytoplasm, membrane
Q79899 Q14349455
(Q21992211,P681,c(Q15989253))
action filter_type
action find
entity Q21992211
relation P681
type Q15989253
[ANSWERS]
['Q21992211', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { resource:Q21992211 property:P681 ?h . ?h rdf:type ontology:Q15989253 }
cytoplasm membrane
cytoplasm membrane
action filter_type
action find
entity Tumor necrosis factor alpha-induced protein 8-like protein 3
relation cell component
type part
['Tumor necrosis factor alpha-induced protein 8-like protein 3', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { resource:Tumor_necrosis_factor_alpha-induced_protein_8-like_protein_3 property:cell_component ?h . ?h rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21094686
P702
Q181394
USER
Which nutrient is encoded by Trp operon repressor    CT_169 ?
(c(Q181394),P702,Q21094686)
action filter_type
action find_reverse
entity Q21094686
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q21094686']
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q181394 . ?u property:P702 resource:Q21094686 }
Trp operon repressor    CT_169
action filter_type
action find_reverse
entity Trp operon repressor    CT_169
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Trp operon repressor    CT_169']
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:nutrient . ?u property:encoded_by resource:Trp_operon_repressor____CT_169 }
[]
nutrient
Q21167093
SYSTEM
Trp operon repressor    CT_169
Q21167093
(c(Q181394),P702,Q21094686)
action filter_type
action find_reverse
entity Q21094686
relation P702
type Q181394
Trp operon repressor CT 169 is encoded by Trp operon repressor CT_169
[{'concept': 'Q181394'}, 'P702', 'Q21094686']
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q181394 . ?u property:P702 resource:Q21094686 }
Trp operon repressor    CT_169
Trp operon repressor CT 169 is encoded by Trp operon repressor CT_169
Trp operon repressor    CT_169
action filter_type
action find_reverse
entity Trp operon repressor    CT_169
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Trp operon repressor    CT_169']
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:nutrient . ?u property:encoded_by resource:Trp_operon_repressor____CT_169 }
[]