Simple Question (Direct)
Simple Question
Q21991298
P702
Q863908
USER
Which nucleic acid sequence encodes Tubulin polyglutamylase complex subunit 2 ?
(Q21991298,P702,c(Q863908))
action filter_type
action find
entity Q21991298
relation P702
type Q863908
['Q21991298', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q21991298 property:P702 ?a . ?a rdf:type ontology:Q863908 }
Tubulin polyglutamylase complex subunit 2
action filter_type
action find
entity Tubulin polyglutamylase complex subunit 2
relation encoded by
type nucleic acid sequence
['Tubulin polyglutamylase complex subunit 2', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:Tubulin_polyglutamylase_complex_subunit_2 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18261974
SYSTEM
Tpgs2
Q18261974
(Q21991298,P702,c(Q863908))
action filter_type
action find
entity Q21991298
relation P702
type Q863908
[ANSWER] encodes Tubulin polyglutamylase complex subunit 2
['Q21991298', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q21991298 property:P702 ?a . ?a rdf:type ontology:Q863908 }
Tpgs2
Tpgs2 encodes Tubulin polyglutamylase complex subunit 2
Tpgs2
action filter_type
action find
entity Tubulin polyglutamylase complex subunit 2
relation encoded by
type nucleic acid sequence
['Tubulin polyglutamylase complex subunit 2', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:Tubulin_polyglutamylase_complex_subunit_2 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18261974
P684
Q863908
USER
What is the name of the species that has that one as its orthologous gene ?
(c(Q863908),P684,Q18261974)
action filter_type
action find
entity Q18261974
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18261974']
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q863908 . resource:Q18261974 property:P684 ?b }
Tpgs2
action filter_type
action find
entity Tpgs2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Tpgs2']
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:nucleic_acid_sequence . resource:Tpgs2 property:ortholog ?b }
[]
nucleic acid sequence
Q18037815
SYSTEM
TPGS2
Q18037815
(c(Q863908),P684,Q18261974)
action filter_type
action find
entity Q18261974
relation P684
type Q863908
The name of the species that has that one as its orthologous gene is the [ANSWER]
[{'concept': 'Q863908'}, 'P684', 'Q18261974']
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q863908 . resource:Q18261974 property:P684 ?b }
TPGS2
The name of the species that has that one as its orthologous gene is the TPGS2
TPGS2
action filter_type
action find
entity Tpgs2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Tpgs2']
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:nucleic_acid_sequence . resource:Tpgs2 property:ortholog ?b }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q18037815 Q23531348
P688
Q181394
USER
Is phage protein    CBO1755 encoded by TPGS2 ?
(Q18037815,P688,Q23531348)
action is_in
entity Q23531348
action find
entity Q18037815
relation P688
['Q18037815', 'P688', 'Q23531348']
ASK WHERE { resource:Q18037815 property:P688 resource:Q23531348 }
TPGS2 phage protein    CBO1755
action is_in
entity phage protein    CBO1755
action find
entity TPGS2
relation encodes
['TPGS2', 'encodes', 'phage protein    CBO1755']
ASK WHERE { resource:TPGS2 property:encodes resource:phage_protein____CBO1755 }
[]
nutrient
SYSTEM
NO
(Q18037815,P688,Q23531348)
action is_in
entity Q23531348
action find
entity Q18037815
relation P688
[ANSWER]
['Q18037815', 'P688', 'Q23531348']
ASK WHERE { resource:Q18037815 property:P688 resource:Q23531348 }
No
action is_in
entity phage protein    CBO1755
action find
entity TPGS2
relation encodes
['TPGS2', 'encodes', 'phage protein    CBO1755']
ASK WHERE { resource:TPGS2 property:encodes resource:phage_protein____CBO1755 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q8386 Q181394
USER
How many nutrients contact exactly 25 nutrients or drugs ?
(c(Q181394),P129,c(Q181394)|c(Q8386))
action count
action equal
action union
action find_tuple_counts
relation P129
type Q181394
type Q181394
action find_tuple_counts
relation P129
type Q181394
type Q8386
value 25
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q181394'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ( COUNT ( ?r ) AS ?q ) ?h WHERE { VALUES ( ?f ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } . ?r rdf:type ?f } GROUP BY ?h } . FILTER ( ?q = 25 ) }
action count
action equal
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
value 25
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'nutrient'}, {'concept': 'drug'}]]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ( COUNT ( ?r ) AS ?q ) ?h WHERE { VALUES ( ?f ) { ( ontology:nutrient ) ( ontology:drug ) } . ?r rdf:type ?f } GROUP BY ?h } . FILTER ( ?q = 25 ) }
[]
nutrient drug nutrient
SYSTEM
1
Q288797
(c(Q181394),P129,c(Q181394)|c(Q8386))
action count
action equal
action union
action find_tuple_counts
relation P129
type Q181394
type Q181394
action find_tuple_counts
relation P129
type Q181394
type Q8386
value 25
[ANSWER]
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q181394'}, {'concept': 'Q8386'}]]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ( COUNT ( ?r ) AS ?q ) ?h WHERE { VALUES ( ?f ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } . ?r rdf:type ?f } GROUP BY ?h } . FILTER ( ?q = 25 ) }
5-hydroxytryptamine receptor 1B
1
action count
action equal
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_tuple_counts
relation physically interacts with
type nutrient
type drug
value 25
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'nutrient'}, {'concept': 'drug'}]]
SELECT DISTINCT ( COUNT ( ?h ) AS ?m ) WHERE { { SELECT DISTINCT ( COUNT ( ?r ) AS ?q ) ?h WHERE { VALUES ( ?f ) { ( ontology:nutrient ) ( ontology:drug ) } . ?r rdf:type ?f } GROUP BY ?h } . FILTER ( ?q = 25 ) }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q18037815
P702
Q181394
USER
How many nutrients are encoded by TPGS2 ?
(c(Q181394),P702,Q18037815)
action count
action filter_type
action find_reverse
entity Q18037815
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q18037815']
SELECT DISTINCT ( COUNT ( ?n ) AS ?c ) WHERE { ?n rdf:type ontology:Q181394 . ?n property:P702 resource:Q18037815 }
TPGS2
action count
action filter_type
action find_reverse
entity TPGS2
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'TPGS2']
SELECT DISTINCT ( COUNT ( ?n ) AS ?c ) WHERE { ?n rdf:type ontology:nutrient . ?n property:encoded_by resource:TPGS2 }
[]
nutrient
SYSTEM
1
Q21134659
(c(Q181394),P702,Q18037815)
action count
action filter_type
action find_reverse
entity Q18037815
relation P702
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q18037815']
SELECT DISTINCT ( COUNT ( ?n ) AS ?c ) WHERE { ?n rdf:type ontology:Q181394 . ?n property:P702 resource:Q18037815 }
Tubulin polyglutamylase complex subunit 2
1
action count
action filter_type
action find_reverse
entity TPGS2
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'TPGS2']
SELECT DISTINCT ( COUNT ( ?n ) AS ?c ) WHERE { ?n rdf:type ontology:nutrient . ?n property:encoded_by resource:TPGS2 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18037815
P703
Q16521
USER
Which taxon is TPGS2 found in ?
(Q18037815,P703,c(Q16521))
action filter_type
action find
entity Q18037815
relation P703
type Q16521
['Q18037815', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?h WHERE { resource:Q18037815 property:P703 ?h . ?h rdf:type ontology:Q16521 }
TPGS2
action filter_type
action find
entity TPGS2
relation found in taxon
type taxon
['TPGS2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?h WHERE { resource:TPGS2 property:found_in_taxon ?h . ?h rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q18037815,P703,c(Q16521))
action filter_type
action find
entity Q18037815
relation P703
type Q16521
TPGS2 is found in [ANSWER]
['Q18037815', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?h WHERE { resource:Q18037815 property:P703 ?h . ?h rdf:type ontology:Q16521 }
Homo sapiens
TPGS2 is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity TPGS2
relation found in taxon
type taxon
['TPGS2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?h WHERE { resource:TPGS2 property:found_in_taxon ?h . ?h rdf:type ontology:taxon }
[]