Simple Question (Direct)
Simple Question
Q23487488
P681
Q15989253
USER
Which is the cell component of 16S rRNA methyltransferase GidB    SSA_0605 ?
(Q23487488,P681,c(Q15989253))
action filter_type
action find
entity Q23487488
relation P681
type Q15989253
['Q23487488', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?b WHERE { resource:Q23487488 property:P681 ?b . ?b rdf:type ontology:Q15989253 }
16S rRNA methyltransferase GidB    SSA_0605
action filter_type
action find
entity 16S rRNA methyltransferase GidB    SSA_0605
relation cell component
type part
['16S rRNA methyltransferase GidB    SSA_0605', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?b WHERE { resource:16S_rRNA_methyltransferase_GidB____SSA_0605 property:cell_component ?b . ?b rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23487488,P681,c(Q15989253))
action filter_type
action find
entity Q23487488
relation P681
type Q15989253
Is the cell component of 16S rRNA methyltransferase GidB SSA_0605 the [ANSWER]
['Q23487488', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?b WHERE { resource:Q23487488 property:P681 ?b . ?b rdf:type ontology:Q15989253 }
cytoplasm
Is the cell component of 16S rRNA methyltransferase GidB SSA_0605 the cytoplasm
cytoplasm
action filter_type
action find
entity 16S rRNA methyltransferase GidB    SSA_0605
relation cell component
type part
['16S rRNA methyltransferase GidB    SSA_0605', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?b WHERE { resource:16S_rRNA_methyltransferase_GidB____SSA_0605 property:cell_component ?b . ?b rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23487488
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by 16S rRNA methyltransferase GidB    SSA_0605 ?
(c(Q863908),P688,Q23487488)
action filter_type
action find_reverse
entity Q23487488
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23487488']
SELECT DISTINCT ?w WHERE { ?w property:P688 resource:Q23487488 . ?w rdf:type ontology:Q863908 }
16S rRNA methyltransferase GidB    SSA_0605
action filter_type
action find_reverse
entity 16S rRNA methyltransferase GidB    SSA_0605
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', '16S rRNA methyltransferase GidB    SSA_0605']
SELECT DISTINCT ?w WHERE { ?w property:encodes resource:16S_rRNA_methyltransferase_GidB____SSA_0605 . ?w rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23403352
SYSTEM
16S rRNA methyltransferase GidB    SSA_0605
Q23403352
(c(Q863908),P688,Q23487488)
action filter_type
action find_reverse
entity Q23487488
relation P688
type Q863908
The nucleic acid sequence that is encoded by 16S rRNA methyltransferase GidB SSA_0605 is in 16S rRNA methyltransferase GidB SSA 0605
[{'concept': 'Q863908'}, 'P688', 'Q23487488']
SELECT DISTINCT ?w WHERE { ?w property:P688 resource:Q23487488 . ?w rdf:type ontology:Q863908 }
16S rRNA methyltransferase GidB    SSA_0605
The nucleic acid sequence that is encoded by 16S rRNA methyltransferase GidB SSA_0605 is in 16S rRNA methyltransferase GidB SSA 0605
16S rRNA methyltransferase GidB    SSA_0605
action filter_type
action find_reverse
entity 16S rRNA methyltransferase GidB    SSA_0605
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', '16S rRNA methyltransferase GidB    SSA_0605']
SELECT DISTINCT ?w WHERE { ?w property:encodes resource:16S_rRNA_methyltransferase_GidB____SSA_0605 . ?w rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23487488
P702
Q863908
USER
Which gene encodes 16S rRNA methyltransferase GidB    SSA_0605 ?
(Q23487488,P702,c(Q863908))
action filter_type
action find
entity Q23487488
relation P702
type Q863908
['Q23487488', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { resource:Q23487488 property:P702 ?e . ?e rdf:type ontology:Q863908 }
16S rRNA methyltransferase GidB    SSA_0605
action filter_type
action find
entity 16S rRNA methyltransferase GidB    SSA_0605
relation encoded by
type nucleic acid sequence
['16S rRNA methyltransferase GidB    SSA_0605', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { resource:16S_rRNA_methyltransferase_GidB____SSA_0605 property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23403352
SYSTEM
16S rRNA methyltransferase GidB    SSA_0605
Q23403352
(Q23487488,P702,c(Q863908))
action filter_type
action find
entity Q23487488
relation P702
type Q863908
16S rRNA methyltransferase GidB SSA 0605 encodes 16S rRNA methyltransferase GidB SSA_0605
['Q23487488', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { resource:Q23487488 property:P702 ?e . ?e rdf:type ontology:Q863908 }
16S rRNA methyltransferase GidB    SSA_0605
16S rRNA methyltransferase GidB SSA 0605 encodes 16S rRNA methyltransferase GidB SSA_0605
16S rRNA methyltransferase GidB    SSA_0605
action filter_type
action find
entity 16S rRNA methyltransferase GidB    SSA_0605
relation encoded by
type nucleic acid sequence
['16S rRNA methyltransferase GidB    SSA_0605', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { resource:16S_rRNA_methyltransferase_GidB____SSA_0605 property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23403352
P703
Q16521
USER
Which taxon is that nucleic acid sequence found in ?
(Q23403352,P703,c(Q16521))
action filter_type
action find
entity Q23403352
relation P703
type Q16521
['Q23403352', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?e WHERE { resource:Q23403352 property:P703 ?e . ?e rdf:type ontology:Q16521 }
16S rRNA methyltransferase GidB    SSA_0605
action filter_type
action find
entity 16S rRNA methyltransferase GidB    SSA_0605
relation found in taxon
type taxon
['16S rRNA methyltransferase GidB    SSA_0605', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?e WHERE { resource:16S_rRNA_methyltransferase_GidB____SSA_0605 property:found_in_taxon ?e . ?e rdf:type ontology:taxon }
[]
taxon
Q21399278
SYSTEM
Streptococcus sanguinis SK36
Q21399278
(Q23403352,P703,c(Q16521))
action filter_type
action find
entity Q23403352
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
['Q23403352', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?e WHERE { resource:Q23403352 property:P703 ?e . ?e rdf:type ontology:Q16521 }
Streptococcus sanguinis SK36
That nucleic acid sequence is found in Streptococcus sanguinis SK36
Streptococcus sanguinis SK36
action filter_type
action find
entity 16S rRNA methyltransferase GidB    SSA_0605
relation found in taxon
type taxon
['16S rRNA methyltransferase GidB    SSA_0605', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?e WHERE { resource:16S_rRNA_methyltransferase_GidB____SSA_0605 property:found_in_taxon ?e . ?e rdf:type ontology:taxon }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q8386
USER
Which nutrients do exactly 22 nutrients or drugs communicate with ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action equal
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 22
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?p ) AS ?m ) ?i WHERE { { ?p property:P129 ?i . ?i rdf:type ontology:Q181394 . ?p rdf:type ontology:Q181394 } UNION { ?i rdf:type ontology:Q181394 . ?p rdf:type ontology:Q8386 . ?p property:P129 ?i } } GROUP BY ?i } . FILTER ( ?m = 22 ) }
action equal
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 22
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?p ) AS ?m ) ?i WHERE { { ?p property:physically_interacts_with ?i . ?i rdf:type ontology:nutrient . ?p rdf:type ontology:nutrient } UNION { ?i rdf:type ontology:nutrient . ?p rdf:type ontology:drug . ?p property:physically_interacts_with ?i } } GROUP BY ?i } . FILTER ( ?m = 22 ) }
[]
nutrient nutrient drug
Q4639596 Q4734884 Q4734892
SYSTEM
5-hydroxytryptamine receptor 2B, Alpha-1A adrenergic receptor, Alpha-2A adrenergic receptor
Q4639596 Q4734884 Q4734892
(c(Q181394)|c(Q8386),P129,c(Q181394))
action equal
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 22
Exactly 22 nutrients or drugs communicate with [ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?p ) AS ?m ) ?i WHERE { { ?p property:P129 ?i . ?i rdf:type ontology:Q181394 . ?p rdf:type ontology:Q181394 } UNION { ?i rdf:type ontology:Q181394 . ?p rdf:type ontology:Q8386 . ?p property:P129 ?i } } GROUP BY ?i } . FILTER ( ?m = 22 ) }
5-hydroxytryptamine receptor 2B Alpha-1A adrenergic receptor Alpha-2A adrenergic receptor
Exactly 22 nutrients or drugs communicate with 5-hydroxytryptamine receptor 2B, Alpha-1A adrenergic receptor and Alpha-2A adrenergic receptor
5-hydroxytryptamine receptor 2B Alpha-1A adrenergic receptor Alpha-2A adrenergic receptor
action equal
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 22
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ( COUNT ( ?p ) AS ?m ) ?i WHERE { { ?p property:physically_interacts_with ?i . ?i rdf:type ontology:nutrient . ?p rdf:type ontology:nutrient } UNION { ?i rdf:type ontology:nutrient . ?p rdf:type ontology:drug . ?p property:physically_interacts_with ?i } } GROUP BY ?i } . FILTER ( ?m = 22 ) }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q414745
P129
Q8386
USER
Does buserelin contact those nutrients ?
(Q414745,P129,Q4639596) (Q414745,P129,Q4734884) (Q414745,P129,Q4734892)
action is_in
entity prev_answer
action find
entity Q414745
relation P129
['Q414745', 'P129', 'Q4639596'] ['Q414745', 'P129', 'Q4734884'] ['Q414745', 'P129', 'Q4734892']
ASK WHERE { resource:Q414745 property:P129 ?s . VALUES ( ?s ) { ( resource:Q4639596 ) ( resource:Q4734884 ) ( resource:Q4734892 ) } }
buserelin
action is_in
entity prev_answer
action find
entity buserelin
relation physically interacts with
['buserelin', 'physically interacts with', '5-hydroxytryptamine receptor 2B'] ['buserelin', 'physically interacts with', 'Alpha-1A adrenergic receptor'] ['buserelin', 'physically interacts with', 'Alpha-2A adrenergic receptor']
ASK WHERE { resource:buserelin property:physically_interacts_with ?s . VALUES ( ?s ) { ( resource:5-hydroxytryptamine_receptor_2B ) ( resource:Alpha-1A_adrenergic_receptor ) ( resource:Alpha-2A_adrenergic_receptor ) } }
[]
drug
SYSTEM
NO
(Q414745,P129,Q4639596) (Q414745,P129,Q4734884) (Q414745,P129,Q4734892)
action is_in
entity prev_answer
action find
entity Q414745
relation P129
[ANSWER]
['Q414745', 'P129', 'Q4639596'] ['Q414745', 'P129', 'Q4734884'] ['Q414745', 'P129', 'Q4734892']
ASK WHERE { resource:Q414745 property:P129 ?s . VALUES ( ?s ) { ( resource:Q4639596 ) ( resource:Q4734884 ) ( resource:Q4734892 ) } }
No
action is_in
entity prev_answer
action find
entity buserelin
relation physically interacts with
['buserelin', 'physically interacts with', '5-hydroxytryptamine receptor 2B'] ['buserelin', 'physically interacts with', 'Alpha-1A adrenergic receptor'] ['buserelin', 'physically interacts with', 'Alpha-2A adrenergic receptor']
ASK WHERE { resource:buserelin property:physically_interacts_with ?s . VALUES ( ?s ) { ( resource:5-hydroxytryptamine_receptor_2B ) ( resource:Alpha-1A_adrenergic_receptor ) ( resource:Alpha-2A_adrenergic_receptor ) } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q8386 Q181394
USER
How many nutrients do around 30 drugs or nutrients interact with ?
(c(Q8386)|c(Q181394),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 30
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?b ) WHERE { { SELECT DISTINCT ?s ( COUNT ( ?e ) AS ?m ) WHERE { { ?s rdf:type ontology:Q181394 . ?e rdf:type ontology:Q8386 . ?e property:P129 ?s } UNION { ?e property:P129 ?s . ?s rdf:type ontology:Q181394 . ?e rdf:type ontology:Q181394 } } GROUP BY ?s } . FILTER ( ?m = 30 ) }
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 30
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?b ) WHERE { { SELECT DISTINCT ?s ( COUNT ( ?e ) AS ?m ) WHERE { { ?s rdf:type ontology:nutrient . ?e rdf:type ontology:drug . ?e property:physically_interacts_with ?s } UNION { ?e property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?e rdf:type ontology:nutrient } } GROUP BY ?s } . FILTER ( ?m = 30 ) }
[]
nutrient drug nutrient
SYSTEM
7
Q7050954 Q287961 Q410142 Q288797 Q21110872 Q21108118 Q21115046
(c(Q8386)|c(Q181394),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 30
[ANSWER]
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?b ) WHERE { { SELECT DISTINCT ?s ( COUNT ( ?e ) AS ?m ) WHERE { { ?s rdf:type ontology:Q181394 . ?e rdf:type ontology:Q8386 . ?e property:P129 ?s } UNION { ?e property:P129 ?s . ?s rdf:type ontology:Q181394 . ?e rdf:type ontology:Q181394 } } GROUP BY ?s } . FILTER ( ?m = 30 ) }
Sodium-dependent noradrenaline transporter Beta-2 adrenergic receptor Sodium-dependent serotonin transporter 5-hydroxytryptamine receptor 1B D(3) dopamine receptor 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1D
7
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 30
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?b ) WHERE { { SELECT DISTINCT ?s ( COUNT ( ?e ) AS ?m ) WHERE { { ?s rdf:type ontology:nutrient . ?e rdf:type ontology:drug . ?e property:physically_interacts_with ?s } UNION { ?e property:physically_interacts_with ?s . ?s rdf:type ontology:nutrient . ?e rdf:type ontology:nutrient } } GROUP BY ?s } . FILTER ( ?m = 30 ) }
[]