Simple Question (Direct)
Simple Question
Q21108660
P681
Q15989253
USER
Which parts are components of Gamma-interferon-inducible lysosomal thiol reductase ?
(Q21108660,P681,c(Q15989253))
action filter_type
action find
entity Q21108660
relation P681
type Q15989253
['Q21108660', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?d WHERE { resource:Q21108660 property:P681 ?d . ?d rdf:type ontology:Q15989253 }
Gamma-interferon-inducible lysosomal thiol reductase
action filter_type
action find
entity Gamma-interferon-inducible lysosomal thiol reductase
relation cell component
type part
['Gamma-interferon-inducible lysosomal thiol reductase', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?d WHERE { resource:Gamma-interferon-inducible_lysosomal_thiol_reductase property:cell_component ?d . ?d rdf:type ontology:part }
[]
part
Q189073 Q83330 Q79899
SYSTEM
cell junction, lysosome, cytoplasm
Q189073 Q83330 Q79899 Q14645596
(Q21108660,P681,c(Q15989253))
action filter_type
action find
entity Q21108660
relation P681
type Q15989253
[ANSWERS] are components of Gamma-interferon-inducible lysosomal thiol reductase
['Q21108660', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?d WHERE { resource:Q21108660 property:P681 ?d . ?d rdf:type ontology:Q15989253 }
cell junction lysosome cytoplasm extracellular region
Cell junction, lysosome and cytoplasm are components of Gamma-interferon-inducible lysosomal thiol reductase
cell junction lysosome cytoplasm
action filter_type
action find
entity Gamma-interferon-inducible lysosomal thiol reductase
relation cell component
type part
['Gamma-interferon-inducible lysosomal thiol reductase', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?d WHERE { resource:Gamma-interferon-inducible_lysosomal_thiol_reductase property:cell_component ?d . ?d rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21108660
P688
Q863908
USER
Which nucleic acid sequence encodes Gamma-interferon-inducible lysosomal thiol reductase ?
(c(Q863908),P688,Q21108660)
action filter_type
action find_reverse
entity Q21108660
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21108660']
SELECT DISTINCT ?m WHERE { ?m property:P688 resource:Q21108660 . ?m rdf:type ontology:Q863908 }
Gamma-interferon-inducible lysosomal thiol reductase
action filter_type
action find_reverse
entity Gamma-interferon-inducible lysosomal thiol reductase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Gamma-interferon-inducible lysosomal thiol reductase']
SELECT DISTINCT ?m WHERE { ?m property:encodes resource:Gamma-interferon-inducible_lysosomal_thiol_reductase . ?m rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18035383
SYSTEM
IFI30
Q18035383
(c(Q863908),P688,Q21108660)
action filter_type
action find_reverse
entity Q21108660
relation P688
type Q863908
[ANSWER] encodes Gamma-interferon-inducible lysosomal thiol reductase
[{'concept': 'Q863908'}, 'P688', 'Q21108660']
SELECT DISTINCT ?m WHERE { ?m property:P688 resource:Q21108660 . ?m rdf:type ontology:Q863908 }
IFI30
IFI30 encodes Gamma-interferon-inducible lysosomal thiol reductase
IFI30
action filter_type
action find_reverse
entity Gamma-interferon-inducible lysosomal thiol reductase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Gamma-interferon-inducible lysosomal thiol reductase']
SELECT DISTINCT ?m WHERE { ?m property:encodes resource:Gamma-interferon-inducible_lysosomal_thiol_reductase . ?m rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18035383
P684
Q863908
USER
Which nucleic acid sequence is that one an orthlogous gene of ?
(c(Q863908),P684,Q18035383)
action filter_type
action find
entity Q18035383
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18035383']
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q863908 . resource:Q18035383 property:P684 ?o }
IFI30
action filter_type
action find
entity IFI30
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'IFI30']
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:nucleic_acid_sequence . resource:IFI30 property:ortholog ?o }
[]
nucleic acid sequence
Q18261530
SYSTEM
Ifi30
Q18261530
(c(Q863908),P684,Q18035383)
action filter_type
action find
entity Q18035383
relation P684
type Q863908
[ANSWER] is that one an orthlogous gene of
[{'concept': 'Q863908'}, 'P684', 'Q18035383']
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q863908 . resource:Q18035383 property:P684 ?o }
Ifi30
Ifi30 is that one an orthlogous gene of
Ifi30
action filter_type
action find
entity IFI30
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'IFI30']
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:nucleic_acid_sequence . resource:IFI30 property:ortholog ?o }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18261530
P702
Q181394
USER
What is the gene that is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q18261530)
action filter_type
action find_reverse
entity Q18261530
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q18261530']
SELECT DISTINCT ?p WHERE { ?p property:P702 resource:Q18261530 . ?p rdf:type ontology:Q181394 }
Ifi30
action filter_type
action find_reverse
entity Ifi30
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Ifi30']
SELECT DISTINCT ?p WHERE { ?p property:encoded_by resource:Ifi30 . ?p rdf:type ontology:nutrient }
[]
nutrient
Q21984028
SYSTEM
Gamma-interferon-inducible lysosomal thiol reductase
Q21984028
(c(Q181394),P702,Q18261530)
action filter_type
action find_reverse
entity Q18261530
relation P702
type Q181394
The gene that is encoded by that nucleic acid sequence is the [ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q18261530']
SELECT DISTINCT ?p WHERE { ?p property:P702 resource:Q18261530 . ?p rdf:type ontology:Q181394 }
Gamma-interferon-inducible lysosomal thiol reductase
The gene that is encoded by that nucleic acid sequence is the Gamma-interferon-inducible lysosomal thiol reductase
Gamma-interferon-inducible lysosomal thiol reductase
action filter_type
action find_reverse
entity Ifi30
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Ifi30']
SELECT DISTINCT ?p WHERE { ?p property:encoded_by resource:Ifi30 . ?p rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q29548 Q18261530
P702 P681
Q181394
USER
Which nutrients do Ifi30 encode and are plasma membrane a cell component of ?
AND((c(Q181394),P702,Q18261530), (c(Q181394),P681,Q29548))
action filter_type
action intersection
action find_reverse
entity Q18261530
relation P702
action find_reverse
entity Q29548
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q18261530'], [{'concept': 'Q181394'}, 'P681', 'Q29548']]}
SELECT DISTINCT ?j WHERE { ?j property:P702 resource:Q18261530 . ?j property:P681 resource:Q29548 . ?j rdf:type ontology:Q181394 }
plasma membrane Ifi30
action filter_type
action intersection
action find_reverse
entity Ifi30
relation encoded by
action find_reverse
entity plasma membrane
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'Ifi30'], [{'concept': 'nutrient'}, 'cell component', 'plasma membrane']]}
SELECT DISTINCT ?j WHERE { ?j property:encoded_by resource:Ifi30 . ?j property:cell_component resource:plasma_membrane . ?j rdf:type ontology:nutrient }
[]
nutrient
Q21984028
SYSTEM
Gamma-interferon-inducible lysosomal thiol reductase
Q21984028
AND((c(Q181394),P702,Q18261530), (c(Q181394),P681,Q29548))
action filter_type
action intersection
action find_reverse
entity Q18261530
relation P702
action find_reverse
entity Q29548
relation P681
type Q181394
Ifi30 encode and are plasma membrane a cell component of the [ANSWER]
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q18261530'], [{'concept': 'Q181394'}, 'P681', 'Q29548']]}
SELECT DISTINCT ?j WHERE { ?j property:P702 resource:Q18261530 . ?j property:P681 resource:Q29548 . ?j rdf:type ontology:Q181394 }
Gamma-interferon-inducible lysosomal thiol reductase
Ifi30 encode and are plasma membrane a cell component of the Gamma-interferon-inducible lysosomal thiol reductase
Gamma-interferon-inducible lysosomal thiol reductase
action filter_type
action intersection
action find_reverse
entity Ifi30
relation encoded by
action find_reverse
entity plasma membrane
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'Ifi30'], [{'concept': 'nutrient'}, 'cell component', 'plasma membrane']]}
SELECT DISTINCT ?j WHERE { ?j property:encoded_by resource:Ifi30 . ?j property:cell_component resource:plasma_membrane . ?j rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|3 entities, 2 direct, 2(direct) are query entities, subject is indirect
Q21984028 Q18261530 Q18305721
P702
Q863908
USER
Is that nutrient encoded by Ifi30 and Lgth3 ?
(Q21984028,P702,Q18261530) (Q21984028,P702,Q18305721)
action is_in
entity Q21984028
action intersection
action find_reverse
entity Q18261530
relation P702
action find_reverse
entity Q18305721
relation P702
['Q21984028', 'P702', 'Q18261530'] ['Q21984028', 'P702', 'Q18305721']
ASK WHERE { resource:Q21984028 property:P702 resource:Q18261530 . resource:Q21984028 property:P702 resource:Q18305721 }
Gamma-interferon-inducible lysosomal thiol reductase Ifi30 Lgth3
action is_in
entity Gamma-interferon-inducible lysosomal thiol reductase
action intersection
action find_reverse
entity Ifi30
relation encoded by
action find_reverse
entity Lgth3
relation encoded by
['Gamma-interferon-inducible lysosomal thiol reductase', 'encoded by', 'Ifi30'] ['Gamma-interferon-inducible lysosomal thiol reductase', 'encoded by', 'Lgth3']
ASK WHERE { resource:Gamma-interferon-inducible_lysosomal_thiol_reductase property:encoded_by resource:Ifi30 . resource:Gamma-interferon-inducible_lysosomal_thiol_reductase property:encoded_by resource:Lgth3 }
[]
nucleic acid sequence
SYSTEM
YES and NO respectively
(Q21984028,P702,Q18261530) (Q21984028,P702,Q18305721)
action is_in
entity Q21984028
action intersection
action find_reverse
entity Q18261530
relation P702
action find_reverse
entity Q18305721
relation P702
[ANSWER]
['Q21984028', 'P702', 'Q18261530'] ['Q21984028', 'P702', 'Q18305721']
ASK WHERE { resource:Q21984028 property:P702 resource:Q18261530 . resource:Q21984028 property:P702 resource:Q18305721 }
YES and NO respectively
action is_in
entity Gamma-interferon-inducible lysosomal thiol reductase
action intersection
action find_reverse
entity Ifi30
relation encoded by
action find_reverse
entity Lgth3
relation encoded by
['Gamma-interferon-inducible lysosomal thiol reductase', 'encoded by', 'Ifi30'] ['Gamma-interferon-inducible lysosomal thiol reductase', 'encoded by', 'Lgth3']
ASK WHERE { resource:Gamma-interferon-inducible_lysosomal_thiol_reductase property:encoded_by resource:Ifi30 . resource:Gamma-interferon-inducible_lysosomal_thiol_reductase property:encoded_by resource:Lgth3 }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q18261530 Q21984028
P688
Q181394
USER
Does Ifi30 encode Gamma-interferon-inducible lysosomal thiol reductase ?
(Q18261530,P688,Q21984028)
action is_in
entity Q21984028
action find
entity Q18261530
relation P688
['Q18261530', 'P688', 'Q21984028']
ASK WHERE { resource:Q18261530 property:P688 resource:Q21984028 }
Ifi30 Gamma-interferon-inducible lysosomal thiol reductase
action is_in
entity Gamma-interferon-inducible lysosomal thiol reductase
action find
entity Ifi30
relation encodes
['Ifi30', 'encodes', 'Gamma-interferon-inducible lysosomal thiol reductase']
ASK WHERE { resource:Ifi30 property:encodes resource:Gamma-interferon-inducible_lysosomal_thiol_reductase }
[]
nutrient
SYSTEM
YES
(Q18261530,P688,Q21984028)
action is_in
entity Q21984028
action find
entity Q18261530
relation P688
[ANSWER]
['Q18261530', 'P688', 'Q21984028']
ASK WHERE { resource:Q18261530 property:P688 resource:Q21984028 }
Yes
action is_in
entity Gamma-interferon-inducible lysosomal thiol reductase
action find
entity Ifi30
relation encodes
['Ifi30', 'encodes', 'Gamma-interferon-inducible lysosomal thiol reductase']
ASK WHERE { resource:Ifi30 property:encodes resource:Gamma-interferon-inducible_lysosomal_thiol_reductase }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q18035383 Q23464825 Q21142537
P688
Q181394
USER
Does IFI30 encode putative cytochrome b    RSP_2807 and Gamma-interferon-inducible lysosomal thiol reductase ?
(Q18035383,P688,Q23464825) (Q18035383,P688,Q21142537)
action is_in
entity Q18035383
action intersection
action find_reverse
entity Q23464825
relation P688
action find_reverse
entity Q21142537
relation P688
['Q18035383', 'P688', 'Q23464825'] ['Q18035383', 'P688', 'Q21142537']
ASK WHERE { resource:Q18035383 property:P688 resource:Q21142537 . resource:Q18035383 property:P688 resource:Q23464825 }
IFI30 putative cytochrome b    RSP_2807 Gamma-interferon-inducible lysosomal thiol reductase
action is_in
entity IFI30
action intersection
action find_reverse
entity putative cytochrome b    RSP_2807
relation encodes
action find_reverse
entity Gamma-interferon-inducible lysosomal thiol reductase
relation encodes
['IFI30', 'encodes', 'putative cytochrome b    RSP_2807'] ['IFI30', 'encodes', 'Gamma-interferon-inducible lysosomal thiol reductase']
ASK WHERE { resource:IFI30 property:encodes resource:Gamma-interferon-inducible_lysosomal_thiol_reductase . resource:IFI30 property:encodes resource:putative_cytochrome_b____RSP_2807 }
[]
nutrient
SYSTEM
NO and YES respectively
(Q18035383,P688,Q23464825) (Q18035383,P688,Q21142537)
action is_in
entity Q18035383
action intersection
action find_reverse
entity Q23464825
relation P688
action find_reverse
entity Q21142537
relation P688
[ANSWER]
['Q18035383', 'P688', 'Q23464825'] ['Q18035383', 'P688', 'Q21142537']
ASK WHERE { resource:Q18035383 property:P688 resource:Q21142537 . resource:Q18035383 property:P688 resource:Q23464825 }
NO and YES respectively
action is_in
entity IFI30
action intersection
action find_reverse
entity putative cytochrome b    RSP_2807
relation encodes
action find_reverse
entity Gamma-interferon-inducible lysosomal thiol reductase
relation encodes
['IFI30', 'encodes', 'putative cytochrome b    RSP_2807'] ['IFI30', 'encodes', 'Gamma-interferon-inducible lysosomal thiol reductase']
ASK WHERE { resource:IFI30 property:encodes resource:Gamma-interferon-inducible_lysosomal_thiol_reductase . resource:IFI30 property:encodes resource:putative_cytochrome_b____RSP_2807 }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q18261530 Q21984028
P688
Q181394
USER
Is Gamma-interferon-inducible lysosomal thiol reductase encoded by Ifi30 ?
(Q18261530,P688,Q21984028)
action is_in
entity Q21984028
action find
entity Q18261530
relation P688
['Q18261530', 'P688', 'Q21984028']
ASK WHERE { resource:Q18261530 property:P688 resource:Q21984028 }
Ifi30 Gamma-interferon-inducible lysosomal thiol reductase
action is_in
entity Gamma-interferon-inducible lysosomal thiol reductase
action find
entity Ifi30
relation encodes
['Ifi30', 'encodes', 'Gamma-interferon-inducible lysosomal thiol reductase']
ASK WHERE { resource:Ifi30 property:encodes resource:Gamma-interferon-inducible_lysosomal_thiol_reductase }
[]
nutrient
SYSTEM
YES
(Q18261530,P688,Q21984028)
action is_in
entity Q21984028
action find
entity Q18261530
relation P688
[ANSWER]
['Q18261530', 'P688', 'Q21984028']
ASK WHERE { resource:Q18261530 property:P688 resource:Q21984028 }
Yes
action is_in
entity Gamma-interferon-inducible lysosomal thiol reductase
action find
entity Ifi30
relation encodes
['Ifi30', 'encodes', 'Gamma-interferon-inducible lysosomal thiol reductase']
ASK WHERE { resource:Ifi30 property:encodes resource:Gamma-interferon-inducible_lysosomal_thiol_reductase }
[]