Simple Question (Direct)
Simple Question
Q21766461
P702
Q863908
USER
What is the gene that encodes DNA mismatch repair protein MutS    TTHA1324 ?
(Q21766461,P702,c(Q863908))
action filter_type
action find
entity Q21766461
relation P702
type Q863908
['Q21766461', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q21766461 property:P702 ?a . ?a rdf:type ontology:Q863908 }
DNA mismatch repair protein MutS    TTHA1324
action filter_type
action find
entity DNA mismatch repair protein MutS    TTHA1324
relation encoded by
type nucleic acid sequence
['DNA mismatch repair protein MutS    TTHA1324', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:DNA_mismatch_repair_protein_MutS____TTHA1324 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q21687620
SYSTEM
DNA mismatch repair protein MutS    TTHA1324
Q21687620
(Q21766461,P702,c(Q863908))
action filter_type
action find
entity Q21766461
relation P702
type Q863908
The gene that encodes DNA mismatch repair protein MutS TTHA 1324 is codes DNA mismatch repair protein MutS TTHA1324
['Q21766461', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q21766461 property:P702 ?a . ?a rdf:type ontology:Q863908 }
DNA mismatch repair protein MutS    TTHA1324
The gene that encodes DNA mismatch repair protein MutS TTHA 1324 is codes DNA mismatch repair protein MutS TTHA1324
DNA mismatch repair protein MutS    TTHA1324
action filter_type
action find
entity DNA mismatch repair protein MutS    TTHA1324
relation encoded by
type nucleic acid sequence
['DNA mismatch repair protein MutS    TTHA1324', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:DNA_mismatch_repair_protein_MutS____TTHA1324 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21766461
P703
Q16521
USER
Which taxon is that nutrient found in ?
(Q21687620,P703,c(Q16521))
action filter_type
action find
entity Q21766461
relation P703
type Q16521
['Q21687620', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?q WHERE { resource:Q21766461 property:P703 ?q . ?q rdf:type ontology:Q16521 }
DNA mismatch repair protein MutS    TTHA1324
action filter_type
action find
entity DNA mismatch repair protein MutS    TTHA1324
relation found in taxon
type taxon
['DNA mismatch repair protein MutS    TTHA1324', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?q WHERE { resource:DNA_mismatch_repair_protein_MutS____TTHA1324 property:found_in_taxon ?q . ?q rdf:type ontology:taxon }
[]
taxon
Q21065233
SYSTEM
Thermus thermophilus HB8
Q21065233
(Q21687620,P703,c(Q16521))
action filter_type
action find
entity Q21766461
relation P703
type Q16521
That nutrient is found in [ANSWER]
['Q21687620', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?q WHERE { resource:Q21766461 property:P703 ?q . ?q rdf:type ontology:Q16521 }
Thermus thermophilus HB8
That nutrient is found in Thermus thermophilus HB8
Thermus thermophilus HB8
action filter_type
action find
entity DNA mismatch repair protein MutS    TTHA1324
relation found in taxon
type taxon
['DNA mismatch repair protein MutS    TTHA1324', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?q WHERE { resource:DNA_mismatch_repair_protein_MutS____TTHA1324 property:found_in_taxon ?q . ?q rdf:type ontology:taxon }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23101138 Q21687620
P688
Q181394
USER
Which nutrients are encoded by DNA mismatch repair protein MutS    TTHA1324 or 2-Cys peroxiredoxin    NRG857_06795 ?
OR((Q21687620,P688,c(Q181394)), (Q23101138,P688,c(Q181394)))
action filter_type
action union
action find
entity Q21687620
relation P688
action find
entity Q23101138
relation P688
type Q181394
{'OR': [['Q21687620', 'P688', {'concept': 'Q181394'}], ['Q23101138', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q23101138 property:P688 ?q } UNION { resource:Q21687620 property:P688 ?q } } . ?q rdf:type ontology:Q181394 }
2-Cys peroxiredoxin    NRG857_06795 DNA mismatch repair protein MutS    TTHA1324
action filter_type
action union
action find
entity DNA mismatch repair protein MutS    TTHA1324
relation encodes
action find
entity 2-Cys peroxiredoxin    NRG857_06795
relation encodes
type nutrient
{'OR': [['DNA mismatch repair protein MutS    TTHA1324', 'encodes', {'concept': 'nutrient'}], ['2-Cys peroxiredoxin    NRG857_06795', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?q WHERE { { { resource:2-Cys_peroxiredoxin____NRG857_06795 property:encodes ?q } UNION { resource:DNA_mismatch_repair_protein_MutS____TTHA1324 property:encodes ?q } } . ?q rdf:type ontology:nutrient }
[]
nutrient
Q21766461 Q24152449
SYSTEM
DNA mismatch repair protein MutS    TTHA1324, 2-Cys peroxiredoxin    NRG857_06795
Q21766461 Q24152449
OR((Q21687620,P688,c(Q181394)), (Q23101138,P688,c(Q181394)))
action filter_type
action union
action find
entity Q21687620
relation P688
action find
entity Q23101138
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q21687620', 'P688', {'concept': 'Q181394'}], ['Q23101138', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q23101138 property:P688 ?q } UNION { resource:Q21687620 property:P688 ?q } } . ?q rdf:type ontology:Q181394 }
DNA mismatch repair protein MutS    TTHA1324 2-Cys peroxiredoxin    NRG857_06795
DNA mismatch repair protein MutS TTHA1324 and 2-Cys peroxiredoxin NRG857 06795 are encoded by DNA mismatch repair protein MutS TTHA1324 or 2-Cys peroxiredoxin NRG857_06795
DNA mismatch repair protein MutS    TTHA1324 2-Cys peroxiredoxin    NRG857_06795
action filter_type
action union
action find
entity DNA mismatch repair protein MutS    TTHA1324
relation encodes
action find
entity 2-Cys peroxiredoxin    NRG857_06795
relation encodes
type nutrient
{'OR': [['DNA mismatch repair protein MutS    TTHA1324', 'encodes', {'concept': 'nutrient'}], ['2-Cys peroxiredoxin    NRG857_06795', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?q WHERE { { { resource:2-Cys_peroxiredoxin____NRG857_06795 property:encodes ?q } UNION { resource:DNA_mismatch_repair_protein_MutS____TTHA1324 property:encodes ?q } } . ?q rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23276193 Q21687620
P702
Q181394
USER
Which nutrients do DNA mismatch repair protein MutS    TTHA1324 or hypothetical protein    MSMEG_2622 encode ?
OR((c(Q181394),P702,Q21687620), (c(Q181394),P702,Q23276193))
action filter_type
action union
action find_reverse
entity Q21687620
relation P702
action find_reverse
entity Q23276193
relation P702
type Q181394
{'OR': [[{'concept': 'Q181394'}, 'P702', 'Q21687620'], [{'concept': 'Q181394'}, 'P702', 'Q23276193']]}
SELECT DISTINCT ?f WHERE { { { ?f property:P702 resource:Q21687620 } UNION { ?f property:P702 resource:Q23276193 } } . ?f rdf:type ontology:Q181394 }
hypothetical protein    MSMEG_2622 DNA mismatch repair protein MutS    TTHA1324
action filter_type
action union
action find_reverse
entity DNA mismatch repair protein MutS    TTHA1324
relation encoded by
action find_reverse
entity hypothetical protein    MSMEG_2622
relation encoded by
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'encoded by', 'DNA mismatch repair protein MutS    TTHA1324'], [{'concept': 'nutrient'}, 'encoded by', 'hypothetical protein    MSMEG_2622']]}
SELECT DISTINCT ?f WHERE { { { ?f property:encoded_by resource:DNA_mismatch_repair_protein_MutS____TTHA1324 } UNION { ?f property:encoded_by resource:hypothetical_protein____MSMEG_2622 } } . ?f rdf:type ontology:nutrient }
[]
nutrient
Q21766461 Q27747058
SYSTEM
DNA mismatch repair protein MutS    TTHA1324, hypothetical protein    MSMEG_2622
Q21766461 Q27747058
OR((c(Q181394),P702,Q21687620), (c(Q181394),P702,Q23276193))
action filter_type
action union
action find_reverse
entity Q21687620
relation P702
action find_reverse
entity Q23276193
relation P702
type Q181394
[ANSWERS]
{'OR': [[{'concept': 'Q181394'}, 'P702', 'Q21687620'], [{'concept': 'Q181394'}, 'P702', 'Q23276193']]}
SELECT DISTINCT ?f WHERE { { { ?f property:P702 resource:Q21687620 } UNION { ?f property:P702 resource:Q23276193 } } . ?f rdf:type ontology:Q181394 }
DNA mismatch repair protein MutS    TTHA1324 hypothetical protein    MSMEG_2622
DNA mismatch repair protein MutS TTHA 1324 or hypothetical protein MSMEG_2622 encode d DNA mismatch repair protein MutS TTHA1324 and hypothetical protein MSMEG 2622
DNA mismatch repair protein MutS    TTHA1324 hypothetical protein    MSMEG_2622
action filter_type
action union
action find_reverse
entity DNA mismatch repair protein MutS    TTHA1324
relation encoded by
action find_reverse
entity hypothetical protein    MSMEG_2622
relation encoded by
type nutrient
{'OR': [[{'concept': 'nutrient'}, 'encoded by', 'DNA mismatch repair protein MutS    TTHA1324'], [{'concept': 'nutrient'}, 'encoded by', 'hypothetical protein    MSMEG_2622']]}
SELECT DISTINCT ?f WHERE { { { ?f property:encoded_by resource:DNA_mismatch_repair_protein_MutS____TTHA1324 } UNION { ?f property:encoded_by resource:hypothetical_protein____MSMEG_2622 } } . ?f rdf:type ontology:nutrient }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type
Q7799751
P129
Q181394 Q79529 Q8386
USER
How many nutrients do less number of chemical substances or drugs collaborate with than Thyroid hormone receptor alpha ?
(c(Q79529)|c(Q8386),P129,c(Q181394))
action count
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find_reverse
entity Q7799751
relation P129
type Q79529
type Q8386
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?r ) WHERE { { SELECT DISTINCT ?q ( COUNT ( ?n ) AS ?b ) WHERE { { ?n property:P129 ?q . ?q rdf:type ontology:Q181394 . ?n rdf:type ontology:Q79529 } UNION { ?n property:P129 ?q . ?n rdf:type ontology:Q8386 . ?q rdf:type ontology:Q181394 } } GROUP BY ?q } . { SELECT DISTINCT ( COUNT ( ?a ) AS ?y ) WHERE { { VALUES ( ?x ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } . ?a rdf:type ?x } . ?a property:P129 resource:Q7799751 } } . FILTER ( ?b < ?y ) }
Thyroid hormone receptor alpha
action count
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find_reverse
entity Thyroid hormone receptor alpha
relation physically interacts with
type chemical substance
type drug
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?r ) WHERE { { SELECT DISTINCT ?q ( COUNT ( ?n ) AS ?b ) WHERE { { ?n property:physically_interacts_with ?q . ?q rdf:type ontology:nutrient . ?n rdf:type ontology:chemical_substance } UNION { ?n property:physically_interacts_with ?q . ?n rdf:type ontology:drug . ?q rdf:type ontology:nutrient } } GROUP BY ?q } . { SELECT DISTINCT ( COUNT ( ?a ) AS ?y ) WHERE { { VALUES ( ?x ) { ( ontology:chemical_substance ) ( ontology:drug ) } . ?a rdf:type ?x } . ?a property:physically_interacts_with resource:Thyroid_hormone_receptor_alpha } } . FILTER ( ?b < ?y ) }
[]
nutrient chemical substance drug
SYSTEM
559
Q21135479 Q21120657 Q21987720 Q5635781 Q22679043 Q21494718 Q21115210 Q5018799 Q21115219 Q21119831 Q21119830 Q4217286 Q21108693 Q21109971 Q21988043 Q21127094 Q21985448 Q21104718 Q21119231 Q21115284 Q21987850 Q21172741 Q423701 Q420930 Q21111688 Q1407929 Q21173169 Q14908176 Q21107052 Q21119836 Q21118791 Q21108135 Q21111175 Q21125451 Q21113312 Q21113314 Q21113317 Q409166 Q21113170 Q21113172 Q1947065 Q15335226 Q21113176 Q2463389 Q21126314 Q14864142 Q4042017 Q15323688 Q21496155 Q6590338 Q7073181 Q21108789 Q21107107 Q4216080 Q21156477 Q21156475 Q7317662 Q4048886 Q22675842 Q14911986 Q21100441 Q423510 Q21113552 Q21137668 Q21114547 Q21100658 Q1552797 Q14865158 Q21135205 Q21110488 Q424440 Q21117208 Q21102756 Q906403 Q3609382 Q21990430 Q21494481 Q21105011 Q21113671 Q21981115 Q4822789 Q401536 Q420604 Q258915 Q21126218 Q21130085 Q21135448 Q21135449 Q21173374 Q21108357 Q21126214 Q21156663 Q21118967 Q6589868 Q21108408 Q21118678 Q21984552 Q21984557 Q7861688 Q21118909 Q7923221 Q21106653 Q7169504 Q21118293 Q21130016 Q21136517 Q21111689 Q908221 Q21496578 Q5323823 Q22677568 Q21496575 Q21496576 Q21109253 Q21100773 Q21100774 Q21988044 Q21102152 Q21107535 Q2042529 Q21114341 Q21109974 Q21985924 Q2398308 Q21988816 Q21113326 Q14905270 Q5201199 Q905736 Q21984063 Q14911929 Q21135975 Q21122125 Q4812911 Q21103089 Q21112081 Q21172213 Q14914580 Q4459747 Q511968 Q21102129 Q21130042 Q15323770 Q5198252 Q21109744 Q21102124 Q21123723 Q5198256 Q21124458 Q21107885 Q21107884 Q21123236 Q21111742 Q21123239 Q15324125 Q7275807 Q2640417 Q21125231 Q21117805 Q21100472 Q21123725 Q21115204 Q21107891 Q21155668 Q1147372 Q21110467 Q5514576 Q7671473 Q21119828 Q15327635 Q21119824 Q21980258 Q21119826 Q2385013 Q21119820 Q5419640 Q21118920 Q21494502 Q21107812 Q22680153 Q21114166 Q21108482 Q7671499 Q7671497 Q21116513 Q7671493 Q21104645 Q21499436 Q21097491 Q21111162 Q21115906 Q21987842 Q408853 Q21119851 Q21130460 Q417149 Q21102588 Q5611730 Q21097266 Q21118785 Q21154430 Q21173746 Q21125466 Q412483 Q420766 Q21496383 Q5005897 Q21113719 Q1493174 Q11071131 Q21139471 Q21497887 Q21113101 Q21113100 Q424031 Q5514257 Q21110304 Q3459294 Q21114338 Q21119672 Q21987844 Q21987843 Q21202200 Q21132140 Q21118732 Q21110396 Q21126773 Q419999 Q21135949 Q21096262 Q21105660 Q21991514 Q21135943 Q21135945 Q21991512 Q21991513 Q21117235 Q21108844 Q21113155 Q21981993 Q21171763 Q21494387 Q4650061 Q21119704 Q21111803 Q21112691 Q15322943 Q21174687 Q21499097 Q21105060 Q21114807 Q21125240 Q21208052 Q21987569 Q21173156 Q21121807 Q21124061 Q21118356 Q21117300 Q21126205 Q21175111 Q21108578 Q21113173 Q21120142 Q21110921 Q411978 Q21106540 Q4036865 Q21111184 Q21983261 Q21111182 Q21111181 Q21102300 Q3931282 Q21139123 Q21114291 Q21108338 Q14891582 Q21496918 Q21106795 Q21117407 Q21113926 Q21110752 Q408305 Q21097237 Q21120955 Q21114574 Q21112525 Q14911895 Q3721138 Q7251483 Q21113330 Q5419638 Q21113337 Q21156191 Q21108487 Q21110901 Q21104817 Q14914570 Q21113158 Q14905748 Q21135903 Q21107088 Q21113152 Q21103337 Q3271551 Q21990456 Q21103323 Q21102136 Q21145932 Q21173215 Q21123245 Q5014947 Q21123246 Q5512833 Q21123242 Q21132248 Q423572 Q12746111 Q422579 Q21499210 Q21100464 Q15323346 Q21112674 Q21100639 Q21988035 Q21105636 Q21126242 Q21126786 Q7117825 Q21115989 Q5572421 Q21107443 Q7117823 Q21497124 Q21123241 Q21118919 Q21497128 Q5198254 Q21119694 Q7136149 Q21111879 Q21125249 Q21988026 Q21988024 Q7671460 Q7671461 Q21173504 Q7671469 Q12746382 Q21121368 Q21106693 Q21119848 Q21103198 Q21497155 Q5464652 Q7671464 Q356093 Q21119847 Q21121466 Q21110933 Q6714411 Q22677167 Q7118491 Q13566123 Q21979519 Q21135411 Q21990458 Q22676780 Q21120698 Q21113274 Q7120326 Q21113278 Q14905076 Q21113115 Q21113504 Q21989670 Q6881891 Q21497874 Q7202245 Q21127300 Q2083074 Q21119653 Q21111553 Q21108161 Q21124401 Q4897285 Q21111495 Q21124409 Q21123752 Q21172884 Q21172886 Q21122109 Q6534535 Q21140676 Q1436420 Q21121716 Q21111833 Q21130508 Q21132789 Q21123216 Q21106691 Q6981557 Q22679008 Q21111336 Q5198250 Q21113831 Q14914198 Q4377404 Q4822488 Q21119843 Q21116933 Q315860 Q21119827 Q5014193 Q21172286 Q21114819 Q21120144 Q21122921 Q6714959 Q21121233 Q21159525 Q22678664 Q5446457 Q5446456 Q21106737 Q14914104 Q3271142 Q21992684 Q21119816 Q10988613 Q21123722 Q21102593 Q5014192 Q21109026 Q1500004 Q21102123 Q21108517 Q565672 Q21154413 Q21113832 Q1979313 Q5611755 Q21123416 Q21111517 Q21988152 Q21121086 Q21982871 Q21984578 Q21113305 Q21133205 Q21119825 Q21102082 Q21984577 Q904925 Q21113169 Q21113168 Q21113161 Q21172271 Q21131101 Q5014958 Q2521094 Q5014957 Q415718 Q7455513 Q21123251 Q21119591 Q21114857 Q21100450 Q21100324 Q21982203 Q21132247 Q21113540 Q423561 Q21120051 Q21106448 Q21987287 Q21115996 Q21118578 Q21115992 Q22676802 Q21109157 Q21118576 Q21115998 Q21201618 Q21118676 Q21118677 Q21108701 Q21988427 Q21991039 Q411791 Q14905763 Q21118884 Q425201 Q9020944 Q21121379 Q21112289 Q21127141 Q21111265 Q21157860 Q7671478 Q21116665 Q21113099 Q15327766 Q21118970 Q21126947 Q21118976 Q416336 Q21113295 Q21113297 Q21173608 Q21136134 Q21129997 Q21107799 Q423628 Q21113349 Q21494464 Q21121276 Q21113510 Q21100810 Q424693 Q21123223 Q288431 Q21107871 Q410434 Q21097216 Q21122509 Q6449560 Q6449562 Q21111520 Q7390572 Q21114955 Q5201183 Q21984381 Q415762 Q6714402 Q21125499 Q21499447 Q21135787 Q15323565 Q5201201 Q571999 Q21495791 Q2005209 Q21100886 Q21115429 Q22683566 Q7002508 Q21121490 Q2356259 Q21121496 Q21123220 Q21113683 Q6981560 Q21118710 Q414401 Q21113127 Q418781 Q21986206
(c(Q79529)|c(Q8386),P129,c(Q181394))
action count
action less
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find_reverse
entity Q7799751
relation P129
type Q79529
type Q8386
[ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?r ) WHERE { { SELECT DISTINCT ?q ( COUNT ( ?n ) AS ?b ) WHERE { { ?n property:P129 ?q . ?q rdf:type ontology:Q181394 . ?n rdf:type ontology:Q79529 } UNION { ?n property:P129 ?q . ?n rdf:type ontology:Q8386 . ?q rdf:type ontology:Q181394 } } GROUP BY ?q } . { SELECT DISTINCT ( COUNT ( ?a ) AS ?y ) WHERE { { VALUES ( ?x ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } . ?a rdf:type ?x } . ?a property:P129 resource:Q7799751 } } . FILTER ( ?b < ?y ) }
Sodium channel protein type 8 subunit alpha Interleukin-23 subunit alpha Mas-related G-protein coupled receptor member D GTPase HRas Aldose reductase Lysophosphatidic acid receptor 2 ATP-binding cassette sub-family A member 1 Calcium-activated potassium channel subunit alpha-1 Oxysterols receptor LXR-beta Potassium voltage-gated channel subfamily H member 5 Potassium channel subfamily K member 18 Cathepsin S G-protein coupled receptor 87 Cation channel sperm-associated protein 4 Sphingosine 1-phosphate receptor 4 Rho-associated protein kinase 2 Hydroxycarboxylic acid receptor 1 Solute carrier family 22 member 3 Tyrosine-protein kinase TXK Activated CDC42 kinase 1 Prostaglandin E2 receptor EP2 subtype G-protein coupled receptor 3 Coagulation factor X Glutathione reductase, mitochondrial B2 bradykinin receptor Cytochrome P450 1A1 Lysophosphatidic acid receptor 3 Transient receptor potential cation channel subfamily V member 1 Gap junction alpha-4 protein Small conductance calcium-activated potassium channel protein 1 Multidrug resistance-associated protein 5 Neuronal acetylcholine receptor subunit alpha-10 Neuronal acetylcholine receptor subunit alpha-3 Tryptophan 5-hydroxylase 1 Gamma-aminobutyric acid receptor subunit beta-3 Gamma-aminobutyric acid receptor subunit beta-2 Gamma-aminobutyric acid receptor subunit epsilon Prothrombin Gap junction delta-3 protein Gap junction delta-4 protein Voltage-dependent N-type calcium channel subunit alpha-1B D(2) dopamine receptor Gap junction delta-2 protein Tyrosine-protein kinase Lyn Sodium channel protein type 1 subunit alpha 3-hydroxy-3-methylglutaryl-coenzyme A reductase GTPase KRas Transient receptor potential cation channel subfamily V member 2 Bromodomain testis-specific protein Metabotropic glutamate receptor 7 2-oxoglutarate receptor 1 Potassium voltage-gated channel subfamily KQT member 5 Gap junction alpha-3 protein 72 kDa type IV collagenase Hydroxycarboxylic acid receptor 1 Hydroxycarboxylic acid receptor 3 Nuclear receptor subfamily 1 group D member 2 3-oxo-5-alpha-steroid 4-dehydrogenase 2 Rhodopsin kinase Nociceptin receptor Bromodomain-containing protein 4 Amyloid beta A4 protein ATP-sensitive inward rectifier potassium channel 14 Fibroblast growth factor receptor 4 Nitric oxide synthase, inducible Rho-associated protein kinase 1 Heat-stable enterotoxin receptor Potassium voltage-gated channel subfamily KQT member 1 Dihydroorotate dehydrogenase (quinone), mitochondrial Serine/threonine-protein kinase BRSK2 Cytochrome P450 3A4 Chymotrypsin-like elastase family member 1 Testis-specific serine/threonine-protein kinase 1 Protein kinase C zeta type Cytochrome P450 11B2, mitochondrial P2Y purinoceptor 14 Uracil nucleotide/cysteinyl leukotriene receptor cGMP-dependent 3',5'-cyclic phosphodiesterase ATP-binding cassette sub-family C member 8 G-protein coupled receptor 6 Toll-like receptor 7 Tyrosine-protein kinase Blk Phenylalanine-4-hydroxylase Renin Folate transporter 1 Mitogen-activated protein kinase kinase kinase kinase 5 Sodium channel protein type 2 subunit alpha Sodium channel protein type 3 subunit alpha Plasminogen Cystine/glutamate transporter Sphingosine 1-phosphate receptor 1 Mitogen-activated protein kinase 11 G-protein coupled receptor 183 Metabotropic glutamate receptor 6 H(+)/Cl(-) exchange transporter 3 Melanocortin receptor 3 Potassium voltage-gated channel subfamily A member 3 Potassium voltage-gated channel subfamily D member 1 Non-receptor tyrosine-protein kinase TYK2 Ovarian cancer G-protein coupled receptor 1 Vesicular acetylcholine transporter Solute carrier family 23 member 1 Peroxisome proliferator-activated receptor delta Hydroxymethylglutaryl-CoA synthase, cytoplasmic Serine/threonine-protein kinase PAK 2 Zinc-activated ligand-gated ion channel B1 bradykinin receptor Indoleamine 2,3-dioxygenase 1 Lysophosphatidic acid receptor 3 Histone acetyltransferase p300 Corticotropin-releasing factor receptor 1 Lysophosphatidic acid receptor 4 Lysophosphatidic acid receptor 6 Protein kinase C iota type Chloride transport protein 6 H(+)/Cl(-) exchange transporter 7 Sphingosine 1-phosphate receptor 3 Voltage-dependent T-type calcium channel subunit alpha-1I Dual specificity mitogen-activated protein kinase kinase 6 Toll-like receptor 9 Excitatory amino acid transporter 3 Cation channel sperm-associated protein 3 P2X purinoceptor 4 P2Y purinoceptor 12 Neuropeptide S receptor Gamma-aminobutyric acid receptor subunit gamma-1 Thyrotropin-releasing hormone receptor Cysteinyl leukotriene receptor 2 Prostacyclin receptor G-protein coupled receptor family C group 6 member A Mu-type opioid receptor Multidrug and toxin extrusion protein 1 Serine palmitoyltransferase 3 Serine/threonine-protein kinase ATR Homeodomain-interacting protein kinase 1 Gap junction gamma-3 protein Solute carrier family 22 member 1 Short transient receptor potential channel 6 Toll-like receptor 8 Cyclin-dependent kinase 2 Voltage-dependent T-type calcium channel subunit alpha-1H Carbonyl reductase [NADPH] 1 Transient receptor potential cation channel subfamily M member 4 Cyclin-dependent kinase 6 Dual specificity mitogen-activated protein kinase kinase 7 Voltage-dependent L-type calcium channel subunit alpha-1F Pannexin-2 Cyclin-dependent kinase 9 Sodium-dependent neutral amino acid transporter B(0)AT2 Potassium voltage-gated channel subfamily B member 2 Potassium voltage-gated channel subfamily B member 1 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform Complement C1r subcomponent Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' Transient receptor potential cation channel subfamily V member 4 Nuclear receptor ROR-alpha Aldehyde dehydrogenase, mitochondrial Solute carrier organic anion transporter family member 1A2 cAMP-specific 3',5'-cyclic phosphodiesterase 4A Bromodomain testis-specific protein Pannexin-1 5'-AMP-activated protein kinase subunit beta-1 Potassium voltage-gated channel subfamily D member 1 Death-associated protein kinase 1 Cyclin-dependent kinase 1 Potassium-transporting ATPase alpha chain 1 Glycogen synthase kinase-3 beta Short transient receptor potential channel 7 ATP-sensitive inward rectifier potassium channel 8 Transient receptor potential cation channel subfamily M member 7 G protein-activated inward rectifier potassium channel 2 Short transient receptor potential channel 2 G protein-activated inward rectifier potassium channel 1 Translocator protein Potassium channel subfamily K member 2 Excitatory amino acid transporter 5 P2X purinoceptor 3 G-protein coupled receptor 35 Inositol 1,4,5-trisphosphate receptor type 1 Ornithine decarboxylase Hepatocyte nuclear factor 4-alpha DNA topoisomerase 2-alpha Transient receptor potential cation channel subfamily V member 3 Transient receptor potential cation channel subfamily V member 2 Serine/threonine-protein kinase 4 Transient receptor potential cation channel subfamily M member 7 Dual specificity mitogen-activated protein kinase kinase 4 Muscarinic acetylcholine receptor M1 Sodium/potassium-transporting ATPase subunit alpha-1 Acetylcholine receptor subunit alpha Poly [ADP-ribose] polymerase 2 Prostaglandin E2 receptor EP3 subtype Nitric oxide synthase, endothelial Potassium channel subfamily K member 4 Methionine aminopeptidase 2 Dihydrofolate reductase Sn1-specific diacylglycerol lipase beta Growth hormone-releasing hormone receptor Angiopoietin-1 receptor Mas-related G-protein coupled receptor member D Lysophosphatidic acid receptor 4 Melanocyte-stimulating hormone receptor Tryptophan 5-hydroxylase 2 Cholesterol side-chain cleavage enzyme, mitochondrial Tyrosine 3-monooxygenase Gastrin/cholecystokinin type B receptor Hepatocyte growth factor receptor NAD-dependent protein deacetylase sirtuin-1 Vitamin K-dependent gamma-carboxylase Glucagon-like peptide 2 receptor Mitogen-activated protein kinase 10 G protein-activated inward rectifier potassium channel 1 Gap junction beta-6 protein Gap junction beta-5 protein Mevalonate kinase G-protein coupled estrogen receptor 1 Galanin receptor type 1 Sodium channel protein type 5 subunit alpha Excitatory amino acid transporter 2 Phosphatidylinositol 4-kinase type 2-beta Prostaglandin E2 receptor EP1 subtype Prostaglandin E2 receptor EP4 subtype cAMP-specific 3',5'-cyclic phosphodiesterase 4C Aurora kinase C Maltase-glucoamylase, intestinal Peptidyl-prolyl cis-trans isomerase FKBP1A Putative P2Y purinoceptor 10 Transthyretin Solute carrier family 22 member 11 Sodium leak channel non-selective protein Cyclic nucleotide-gated cation channel alpha-3 Trace amine-associated receptor 3 Solute carrier family 22 member 8 Solute carrier family 22 member 12 Trace amine-associated receptor 5 Trace amine-associated receptor 4 Nuclear receptor ROR-beta P2X purinoceptor 4 Gap junction gamma-1 protein fMet-Leu-Phe receptor G-protein coupled receptor 12 Steroid hormone receptor ERR1 Bile salt export pump Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A Voltage-dependent L-type calcium channel subunit alpha-1S Beta-adrenergic receptor kinase 2 Short transient receptor potential channel 4 Sodium/bile acid cotransporter Retinoic acid receptor RXR-alpha Aldo-keto reductase family 1 member C3 Lysine-specific demethylase 7A Solute carrier organic anion transporter family member 2A1 Sodium/myo-inositol cotransporter ATP-sensitive inward rectifier potassium channel 15 Bcl-2-like protein 1 P2Y purinoceptor 14 Neurotensin receptor type 1 Calcium/calmodulin-dependent protein kinase type II subunit gamma Cytochrome P450 3A5 Sphingosine 1-phosphate receptor 4 Solute carrier family 22 member 2 Squalene synthase Gap junction beta-4 protein Neuropeptide Y receptor type 1 Uracil nucleotide/cysteinyl leukotriene receptor Thromboxane A2 receptor Geranylgeranyl pyrophosphate synthase Discoidin domain-containing receptor 2 Neuronal acetylcholine receptor subunit alpha-9 Platelet-derived growth factor receptor beta Neuronal acetylcholine receptor subunit alpha-6 Neuronal acetylcholine receptor subunit alpha-2 C-C chemokine receptor type 4 Calcitonin receptor Lysophosphatidic acid receptor 2 Interleukin-17A Ribonucleoside-diphosphate reductase subunit M2 Transient receptor potential cation channel subfamily V member 6 Lysophosphatidic acid receptor 1 cAMP-specific 3',5'-cyclic phosphodiesterase 4D Serine/threonine-protein kinase 24 Cholecystokinin receptor type A Cytochrome P450 2J2 Steroid 17-alpha-hydroxylase/17,20 lyase Aromatic-L-amino-acid decarboxylase Nuclear receptor subfamily 2 group C member 2 Gamma-aminobutyric acid receptor subunit beta-1 Serine/threonine-protein kinase N1 Thymidylate synthase Neutrophil elastase Interferon-induced, double-stranded RNA-activated protein kinase Gamma-aminobutyric acid receptor subunit gamma-3 Excitatory amino acid transporter 4 Gamma-aminobutyric acid receptor subunit theta Cyclin-dependent kinase 19 Parathyroid hormone/parathyroid hormone-related peptide receptor Gastrin/cholecystokinin type B receptor Receptor tyrosine-protein kinase erbB-4 Transient receptor potential cation channel subfamily M member 6 Gap junction alpha-8 protein Voltage-dependent L-type calcium channel subunit alpha-1C Vasoactive intestinal polypeptide receptor 1 Gap junction alpha-10 protein Gap junction alpha-5 protein Two pore calcium channel protein 1 Smoothened homolog Prostaglandin D2 receptor 2 Two pore calcium channel protein 2 Retinoic acid receptor RXR-beta Phospholipase D2 Serine/threonine-protein kinase 3 High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A Cytochrome P450 1B1 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C Cyclin-G-associated kinase cAMP-specific 3',5'-cyclic phosphodiesterase 4B G protein-coupled receptor kinase 6 Tyrosine-protein kinase BTK Motilin receptor Insulin receptor Carbonic anhydrase 13 Bromodomain-containing protein 3 Nuclear receptor subfamily 1 group D member 1 Poly [ADP-ribose] polymerase 1 Programmed cell death 1 ligand 1 Sphingosine 1-phosphate receptor 5 cGMP-gated cation channel alpha-1 Sphingosine 1-phosphate receptor 5 P2X purinoceptor 7 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 Excitatory amino acid transporter 1 N-formyl peptide receptor 2 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform B2 bradykinin receptor Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B P2X purinoceptor 1 B1 bradykinin receptor Cyclin-dependent kinase 8 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Parathyroid hormone 2 receptor Potassium voltage-gated channel subfamily A member 2 Solute carrier organic anion transporter family member 1C1 Sphingosine 1-phosphate receptor 2 Sphingosine 1-phosphate receptor 1 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Interstitial collagenase Short transient receptor potential channel 6 Oxoeicosanoid receptor 1 Sodium- and chloride-dependent GABA transporter 1 Cytoplasmic tyrosine-protein kinase BMX Potassium channel subfamily K member 9 G-protein coupled receptor family C group 6 member A Voltage-dependent L-type calcium channel subunit alpha-1S Follicle-stimulating hormone receptor Short transient receptor potential channel 4 Adenosine deaminase Potassium channel subfamily K member 12 Sphingosine 1-phosphate receptor 2 Probable G-protein coupled receptor 63 Mitogen-activated protein kinase 8 Thyroid peroxidase Histone acetyltransferase KAT2B Neuropeptide FF receptor 2 Equilibrative nucleoside transporter 1 Multidrug and toxin extrusion protein 2 Prostaglandin F2-alpha receptor Neuronal acetylcholine receptor subunit alpha-7 P2Y purinoceptor 6 Fatty-acid amide hydrolase 1 cAMP-dependent protein kinase catalytic subunit alpha Fatty-acid amide hydrolase 2 Nuclear receptor subfamily 1 group I member 2 Gap junction beta-1 protein Inward rectifier potassium channel 13 DNA topoisomerase 2-alpha Mitogen-activated protein kinase 9 Potassium channel subfamily U member 1 Platelet-activating factor receptor Serine/threonine-protein kinase 10 Aquaporin-1 Solute carrier family 12 member 2 Solute carrier family 22 member 6 Lysine-specific histone demethylase 1A Solute carrier family 15 member 1 Beta-adrenergic receptor kinase 1 Calcium/calmodulin-dependent protein kinase type II subunit beta Solute carrier family 12 member 1 Serine/threonine-protein kinase pim-2 Lysophosphatidic acid receptor 6 Lysophosphatidic acid receptor 5 Serine palmitoyltransferase 2 Leukotriene B4 receptor 2 Histone deacetylase 11 Xanthine dehydrogenase/oxidase Nitric oxide synthase, brain Cation channel sperm-associated protein 2 Inhibitor of nuclear factor kappa-B kinase subunit alpha Chloride channel protein ClC-Kb Serine/threonine-protein kinase N2 Tyrosine-protein kinase FRK Sodium channel protein type 4 subunit alpha Cathepsin K ALK tyrosine kinase receptor Cyclin-dependent kinase 4 Type-2 angiotensin II receptor Trifunctional purine biosynthetic protein adenosine-3 Presenilin-1 Aurora kinase A Small conductance calcium-activated potassium channel protein 2 Cyclin-dependent-like kinase 5 Calcitonin Potassium channel subfamily K member 10 Casein kinase I isoform delta Brain-specific angiogenesis inhibitor 1 Lysine-specific demethylase 2A Neuropeptide Y receptor type 2 Chromaffin granule amine transporter Mucolipin-1 Ribonucleoside-diphosphate reductase large subunit Ryanodine receptor 3 Ceramide glucosyltransferase Fibroblast growth factor receptor 3 Fibroblast growth factor receptor 2 Proteinase-activated receptor 1 Toll-like receptor 4 Cytochrome P450 2D6 Vascular endothelial growth factor receptor 3 Potassium channel subfamily K member 3 Leukotriene B4 receptor 1 Pannexin-3 Sn1-specific diacylglycerol lipase alpha Casein kinase I isoform epsilon Tryptase alpha/beta-1 Nuclear receptor subfamily 1 group I member 3 Voltage-dependent T-type calcium channel subunit alpha-1G TRAF2 and NCK-interacting protein kinase Lysosomal alpha-glucosidase Cathepsin Z Adhesion G protein-coupled receptor G3 Very low-density lipoprotein receptor Growth hormone secretagogue receptor type 1 Sodium/hydrogen exchanger 5 cAMP-dependent protein kinase catalytic subunit beta Serine palmitoyltransferase 1 Proton-coupled folate transporter Glucocorticoid receptor Potassium voltage-gated channel subfamily D member 2 Gamma-aminobutyric acid receptor subunit gamma-2 Mas-related G-protein coupled receptor member X1 G protein-activated inward rectifier potassium channel 4 Acid-sensing ion channel 2 Potassium voltage-gated channel subfamily D member 3 Cytochrome P450 11B1, mitochondrial Gap junction beta-7 protein Gap junction gamma-2 protein Gap junction alpha-9 protein Platelet-activating factor acetylhydrolase Membrane primary amine oxidase Cytochrome P450 2B6 Synaptic vesicular amine transporter Cytochrome P450 2C8 C-X-C chemokine receptor type 4 Serum amyloid P-component cAMP-specific 3',5'-cyclic phosphodiesterase 7B Neurotensin receptor type 2 Protein kinase C eta type Bromodomain-containing protein 2 Serine/threonine-protein kinase pim-1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 G protein-coupled receptor kinase 4 Calcium/calmodulin-dependent protein kinase type 1D Lysosomal protective protein Retinoic acid receptor RXR-gamma Aquaporin-9 Neuromedin-K receptor Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 Potassium channel subfamily T member 2 Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform Thymidylate synthase Serine/threonine-protein kinase PLK4 Potassium channel subfamily T member 1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 Neuronal acetylcholine receptor subunit alpha-4 Melanocortin receptor 4 Melanocortin receptor 5 Glutamate receptor ionotropic, kainate 1 Prostacyclin receptor Multidrug and toxin extrusion protein 2 Arachidonate 5-lipoxygenase Inward rectifier potassium channel 2 Niemann-Pick C1-like protein 1 Apoptosis regulator Bcl-2 Tyrosine-protein kinase Lck Sodium/myo-inositol cotransporter 2 Oxysterols receptor LXR-alpha Sodium-coupled monocarboxylate transporter 1 Cation channel sperm-associated protein 1 Cystathionine gamma-lyase Transient receptor potential cation channel subfamily M member 1 Dual specificity mitogen-activated protein kinase kinase 2 Gap junction beta-3 protein Transient receptor potential cation channel subfamily V member 5 G-protein coupled receptor 143 GTPase NRas Probable G-protein coupled receptor 139 Antithrombin-III Gamma-aminobutyric acid receptor subunit pi Gamma-aminobutyric acid receptor subunit delta Peptidyl-prolyl cis-trans isomerase A Solute carrier organic anion transporter family member 3A1 Atypical chemokine receptor 3 Inositol 1,4,5-trisphosphate receptor type 2 Tyrosine-protein kinase Fyn Metabotropic glutamate receptor 4 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor Proton-coupled amino acid transporter 1 ATP-sensitive inward rectifier potassium channel 10 Chloride channel protein ClC-Ka Pancreatic triacylglycerol lipase High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B Metabotropic glutamate receptor 1 Potassium voltage-gated channel subfamily A member 6 RAF proto-oncogene serine/threonine-protein kinase Tyrosine-protein kinase Yes Phosphorylase b kinase gamma catalytic chain, liver/testis isoform Potassium voltage-gated channel subfamily KQT member 1 Potassium voltage-gated channel subfamily KQT member 3 Chloride channel protein 1 Small conductance calcium-activated potassium channel protein 3 3-phosphoinositide-dependent protein kinase 1 Cystathionine beta-synthase Voltage-dependent L-type calcium channel subunit alpha-1D Dopamine beta-hydroxylase Mitogen-activated protein kinase 14 Trypsin-1 Muscarinic acetylcholine receptor M2 Tubulin beta-3 chain Transient receptor potential cation channel subfamily M member 5 Cysteinyl leukotriene receptor 1 Inhibitor of nuclear factor kappa-B kinase subunit beta Metabotropic glutamate receptor 5 Insulin-like growth factor 1 receptor Lanosterol 14-alpha demethylase High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A Histone lysine demethylase PHF8 Neuropeptide FF receptor 1 Sphingosine 1-phosphate receptor 3 Gap junction alpha-1 protein Phosphatidylinositol 4-kinase type 2-alpha High affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A ATP-binding cassette sub-family G member 2 Sodium channel protein type 9 subunit alpha Retinoic acid receptor RXR-alpha Purine nucleoside phosphorylase Gap junction beta-2 protein Catechol O-methyltransferase Neurotensin receptor type 2
559
action count
action less
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find_reverse
entity Thyroid hormone receptor alpha
relation physically interacts with
type chemical substance
type drug
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?r ) WHERE { { SELECT DISTINCT ?q ( COUNT ( ?n ) AS ?b ) WHERE { { ?n property:physically_interacts_with ?q . ?q rdf:type ontology:nutrient . ?n rdf:type ontology:chemical_substance } UNION { ?n property:physically_interacts_with ?q . ?n rdf:type ontology:drug . ?q rdf:type ontology:nutrient } } GROUP BY ?q } . { SELECT DISTINCT ( COUNT ( ?a ) AS ?y ) WHERE { { VALUES ( ?x ) { ( ontology:chemical_substance ) ( ontology:drug ) } . ?a rdf:type ?x } . ?a property:physically_interacts_with resource:Thyroid_hormone_receptor_alpha } } . FILTER ( ?b < ?y ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q27740879 Q27747058
P703
Q631147
USER
Which infraspecific names are hypothetical protein    MSMEG_2622 or glycosyltransferase    ML0452 found ?
OR((Q27747058,P703,c(Q631147)), (Q27740879,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27747058
relation P703
action find
entity Q27740879
relation P703
type Q631147
{'OR': [['Q27747058', 'P703', {'concept': 'Q631147'}], ['Q27740879', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q27747058 property:P703 ?q } UNION { resource:Q27740879 property:P703 ?q } } . ?q rdf:type ontology:Q631147 }
glycosyltransferase    ML0452 hypothetical protein    MSMEG_2622
action filter_type
action union
action find
entity hypothetical protein    MSMEG_2622
relation found in taxon
action find
entity glycosyltransferase    ML0452
relation found in taxon
type infraspecific name
{'OR': [['hypothetical protein    MSMEG_2622', 'found in taxon', {'concept': 'infraspecific name'}], ['glycosyltransferase    ML0452', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?q WHERE { { { resource:hypothetical_protein____MSMEG_2622 property:found_in_taxon ?q } UNION { resource:glycosyltransferase____ML0452 property:found_in_taxon ?q } } . ?q rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102986 Q21102985
SYSTEM
Mycobacterium smegmatis str. MC2 155, Mycobacterium leprae TN
Q21102986 Q21102985
OR((Q27747058,P703,c(Q631147)), (Q27740879,P703,c(Q631147)))
action filter_type
action union
action find
entity Q27747058
relation P703
action find
entity Q27740879
relation P703
type Q631147
[ANSWERS] are hypothetical protein MSMEG_2622 or glycosyltransferase ML0452 found
{'OR': [['Q27747058', 'P703', {'concept': 'Q631147'}], ['Q27740879', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q27747058 property:P703 ?q } UNION { resource:Q27740879 property:P703 ?q } } . ?q rdf:type ontology:Q631147 }
Mycobacterium smegmatis str. MC2 155 Mycobacterium leprae TN
Mycobacterium smegmatis str. MC2 155 and Mycobacterium leprae TN are hypothetical protein MSMEG_2622 or glycosyltransferase ML0452 found
Mycobacterium smegmatis str. MC2 155 Mycobacterium leprae TN
action filter_type
action union
action find
entity hypothetical protein    MSMEG_2622
relation found in taxon
action find
entity glycosyltransferase    ML0452
relation found in taxon
type infraspecific name
{'OR': [['hypothetical protein    MSMEG_2622', 'found in taxon', {'concept': 'infraspecific name'}], ['glycosyltransferase    ML0452', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?q WHERE { { { resource:hypothetical_protein____MSMEG_2622 property:found_in_taxon ?q } UNION { resource:glycosyltransferase____ML0452 property:found_in_taxon ?q } } . ?q rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27740879
P682
Q1057
USER
What is the metabolic process that glycosyltransferase    ML0452 is involved in ?
(Q21102986,P682,c(Q1057)) (Q21102985,P682,c(Q1057))
action filter_type
action find
entity Q27740879
relation P682
type Q1057
['Q21102986', 'P682', {'concept': 'Q1057'}] ['Q21102985', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?z WHERE { resource:Q27740879 property:P682 ?z . ?z rdf:type ontology:Q1057 }
glycosyltransferase    ML0452
action filter_type
action find
entity glycosyltransferase    ML0452
relation biological process
type metabolic process
['Mycobacterium smegmatis str. MC2 155', 'biological process', {'concept': 'metabolic process'}] ['Mycobacterium leprae TN', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?z WHERE { resource:glycosyltransferase____ML0452 property:biological_process ?z . ?z rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349667
SYSTEM
lipid metabolic process
Q14349667
(Q21102986,P682,c(Q1057)) (Q21102985,P682,c(Q1057))
action filter_type
action find
entity Q27740879
relation P682
type Q1057
The metabolic process that glycosyltransferase ML 0452 is involved in is the [ANSWER]
['Q21102986', 'P682', {'concept': 'Q1057'}] ['Q21102985', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?z WHERE { resource:Q27740879 property:P682 ?z . ?z rdf:type ontology:Q1057 }
lipid metabolic process
The metabolic process that glycosyltransferase ML 0452 is involved in is the lipid metabolic process
lipid metabolic process
action filter_type
action find
entity glycosyltransferase    ML0452
relation biological process
type metabolic process
['Mycobacterium smegmatis str. MC2 155', 'biological process', {'concept': 'metabolic process'}] ['Mycobacterium leprae TN', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?z WHERE { resource:glycosyltransferase____ML0452 property:biological_process ?z . ?z rdf:type ontology:metabolic_process }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27740879
P681
Q5058355
USER
What is a component of that nutrient ?
(Q14349667,P681,c(Q5058355))
action filter_type
action find
entity Q27740879
relation P681
type Q5058355
['Q14349667', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q5058355 . resource:Q27740879 property:P681 ?c }
glycosyltransferase    ML0452
action filter_type
action find
entity glycosyltransferase    ML0452
relation cell component
type cellular component
['lipid metabolic process', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:cellular_component . resource:glycosyltransferase____ML0452 property:cell_component ?c }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q14349667,P681,c(Q5058355))
action filter_type
action find
entity Q27740879
relation P681
type Q5058355
A component of that nutrient is the [ANSWER]
['Q14349667', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q5058355 . resource:Q27740879 property:P681 ?c }
plasma membrane
A component of that nutrient is the plasma membrane
plasma membrane
action filter_type
action find
entity glycosyltransferase    ML0452
relation cell component
type cellular component
['lipid metabolic process', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:cellular_component . resource:glycosyltransferase____ML0452 property:cell_component ?c }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type
Q22327513
P361
Q5058355 Q5058355
USER
Which cellular components are a part of lesser number of cellular components than postsynaptic specialization ?
(c(Q5058355),P361,c(Q5058355))
action less
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_type
action find
entity Q22327513
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?n WHERE { { SELECT DISTINCT ( COUNT ( ?o ) AS ?d ) WHERE { resource:Q22327513 property:P361 ?o . ?o rdf:type ontology:Q5058355 } } . FILTER ( ?e < ?d ) . { SELECT DISTINCT ?n ( COUNT ( ?f ) AS ?e ) WHERE { ?n rdf:type ontology:Q5058355 . ?f rdf:type ontology:Q5058355 . ?n property:P361 ?f } GROUP BY ?n } }
postsynaptic specialization
action less
action find_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_type
action find
entity postsynaptic specialization
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?n WHERE { { SELECT DISTINCT ( COUNT ( ?o ) AS ?d ) WHERE { resource:postsynaptic_specialization property:part_of ?o . ?o rdf:type ontology:cellular_component } } . FILTER ( ?e < ?d ) . { SELECT DISTINCT ?n ( COUNT ( ?f ) AS ?e ) WHERE { ?n rdf:type ontology:cellular_component . ?f rdf:type ontology:cellular_component . ?n property:part_of ?f } GROUP BY ?n } }
[]
cellular component cellular component
Q14912978 Q22327015 Q22326799
SYSTEM
mitochondrial nucleoid, photosystem II oxygen evolving complex, alpha-1,6-mannosyltransferase complex
Q22327392 Q22328737 Q14912978 Q21108229 Q22327015 Q22327805 Q14864978 Q14864971 Q22327396 Q22326356 Q22327622 Q24570686 Q22327479 Q22327475 Q21172343 Q21172341 Q22326870 Q22327043 Q22326188 Q22326831 Q14877465 Q22327676 Q22326089 Q22327469 Q24576579 Q14914004 Q21095183 Q14905221 Q22327389 Q21105647 Q15320191 Q21106212 Q22326799 Q22328904 Q22329850 Q26253851 Q22328035 Q22327397 Q22329249 Q22327525 Q22327526 Q22329848 Q22329843 Q22329844 Q22329845 Q22329846 Q24570682 Q14911512 Q24570689 Q22327468 Q22327061 Q22327803 Q24576582 Q22329409 Q22326951 Q22328884 Q22328762 Q22327083 Q14873267 Q22329076 Q22328801 Q22330049 Q2914458 Q22325454 Q21097505 Q16949578 Q22327686 Q22327108 Q22329467 Q22327341 Q6414172 Q22327736 Q193825 Q22327423
(c(Q5058355),P361,c(Q5058355))
action less
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_type
action find
entity Q22327513
relation P361
type Q5058355
[ANSWERS] are a part of lesser number of cellular components than postsynaptic specialization
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?n WHERE { { SELECT DISTINCT ( COUNT ( ?o ) AS ?d ) WHERE { resource:Q22327513 property:P361 ?o . ?o rdf:type ontology:Q5058355 } } . FILTER ( ?e < ?d ) . { SELECT DISTINCT ?n ( COUNT ( ?f ) AS ?e ) WHERE { ?n rdf:type ontology:Q5058355 . ?f rdf:type ontology:Q5058355 . ?n property:P361 ?f } GROUP BY ?n } }
symbiont-containing vacuolar space iron-sulfur cluster assembly complex mitochondrial nucleoid subapical complex photosystem II oxygen evolving complex photosynthetic membrane lipopolysaccharide receptor complex succinate dehydrogenase complex scaffoldin complex membrane protein complex side of membrane extrinsic component of presynaptic membrane presynapse postsynapse inner dense plaque of desmosome outer dense plaque of desmosome DAPK1-calmodulin complex plasma membrane-derived thylakoid ribulose bisphosphate carboxylase complex aster nuclear membrane part receptor complex plasma membrane-derived thylakoid membrane contractile fiber part female germline ring canal inner rim intrinsic component of presynaptic membrane synaptic membrane dendritic spine head symbiont-containing vacuole membrane host cell part transmembrane transporter complex synaptic cleft GPI-anchor transamidase complex alpha-1,6-mannosyltransferase complex dosage compensation complex icosahedral viral capsid, spike integral component of spine apparatus membrane organelle lumen extracellular exosome complex virion nucleoid cytoplasmic side of dendritic spine plasma membrane subsynaptic reticulum icosahedral viral capsid, collar viral outer capsid viral intermediate capsid viral inner capsid icosahedral viral capsid, neck spine apparatus membrane stereocilium extrinsic component of postsynaptic membrane female germline ring canal outer rim extracellular isoamylase complex nuclear membrane complex Bqt3-Bqt4 intrinsic component of postsynaptic membrane extracellular core region of desmosome oxidoreductase complex organellar ribosome Dxr protein complex PTEN phosphatase complex cell-cell junction plastid nucleoid TRAPPI protein complex eif4e-cup complex extracellular space curli dendritic spine neck Autapse prospore membrane mitochondrial membrane part bacterial-type flagellum part plasma membrane-derived thylakoid photosystem II kinocilium chaperone-mediated autophagy translocation complex extracellular matrix extracellular organelle
Mitochondrial nucleoid, photosystem II oxygen evolving complex and alpha-1,6-mannosyltransferase complex are a part of lesser number of cellular components than postsynaptic specialization
mitochondrial nucleoid photosystem II oxygen evolving complex alpha-1,6-mannosyltransferase complex
action less
action find_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_type
action find
entity postsynaptic specialization
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?n WHERE { { SELECT DISTINCT ( COUNT ( ?o ) AS ?d ) WHERE { resource:postsynaptic_specialization property:part_of ?o . ?o rdf:type ontology:cellular_component } } . FILTER ( ?e < ?d ) . { SELECT DISTINCT ?n ( COUNT ( ?f ) AS ?e ) WHERE { ?n rdf:type ontology:cellular_component . ?f rdf:type ontology:cellular_component . ?n property:part_of ?f } GROUP BY ?n } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Incomplete
Q24570673
P361
Q5058355 Q5058355
USER
And what about postsynaptic endosome membrane?
(c(Q5058355),P361,c(Q5058355))
action less
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_type
action find
entity Q24570673
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ?i ( COUNT ( ?s ) AS ?y ) WHERE { ?i property:P361 ?s . ?i rdf:type ontology:Q5058355 . ?s rdf:type ontology:Q5058355 } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?w ) AS ?u ) WHERE { resource:Q24570673 property:P361 ?w . ?w rdf:type ontology:Q5058355 } } . FILTER ( ?y < ?u ) }
postsynaptic endosome membrane
action less
action find_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_type
action find
entity postsynaptic endosome membrane
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ?i ( COUNT ( ?s ) AS ?y ) WHERE { ?i property:part_of ?s . ?i rdf:type ontology:cellular_component . ?s rdf:type ontology:cellular_component } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?w ) AS ?u ) WHERE { resource:postsynaptic_endosome_membrane property:part_of ?w . ?w rdf:type ontology:cellular_component } } . FILTER ( ?y < ?u ) }
[]
cellular component cellular component
Q14912978 Q22327015 Q22326799
SYSTEM
mitochondrial nucleoid, photosystem II oxygen evolving complex, alpha-1,6-mannosyltransferase complex
Q22327392 Q22328737 Q14912978 Q21108229 Q22327015 Q22327805 Q14864978 Q14864971 Q22327396 Q22326356 Q22327622 Q24570686 Q22327479 Q22327475 Q21172343 Q21172341 Q22326870 Q22327043 Q22326188 Q22326831 Q14877465 Q22327676 Q22326089 Q22327469 Q24576579 Q14914004 Q21095183 Q14905221 Q22327389 Q21105647 Q15320191 Q21106212 Q22326799 Q22328904 Q22329850 Q26253851 Q22328035 Q22327397 Q22329249 Q22327525 Q22327526 Q22329848 Q22329843 Q22329844 Q22329845 Q22329846 Q24570682 Q14911512 Q24570689 Q22327468 Q22327061 Q22327803 Q24576582 Q22329409 Q22326951 Q22328884 Q22328762 Q22327083 Q14873267 Q22329076 Q22328801 Q22330049 Q2914458 Q22325454 Q21097505 Q16949578 Q22327686 Q22327108 Q22329467 Q22327341 Q6414172 Q22327736 Q193825 Q22327423
(c(Q5058355),P361,c(Q5058355))
action less
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action count
action filter_type
action find
entity Q24570673
relation P361
type Q5058355
[ANSWERS]
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ?i ( COUNT ( ?s ) AS ?y ) WHERE { ?i property:P361 ?s . ?i rdf:type ontology:Q5058355 . ?s rdf:type ontology:Q5058355 } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?w ) AS ?u ) WHERE { resource:Q24570673 property:P361 ?w . ?w rdf:type ontology:Q5058355 } } . FILTER ( ?y < ?u ) }
symbiont-containing vacuolar space iron-sulfur cluster assembly complex mitochondrial nucleoid subapical complex photosystem II oxygen evolving complex photosynthetic membrane lipopolysaccharide receptor complex succinate dehydrogenase complex scaffoldin complex membrane protein complex side of membrane extrinsic component of presynaptic membrane presynapse postsynapse inner dense plaque of desmosome outer dense plaque of desmosome DAPK1-calmodulin complex plasma membrane-derived thylakoid ribulose bisphosphate carboxylase complex aster nuclear membrane part receptor complex plasma membrane-derived thylakoid membrane contractile fiber part female germline ring canal inner rim intrinsic component of presynaptic membrane synaptic membrane dendritic spine head symbiont-containing vacuole membrane host cell part transmembrane transporter complex synaptic cleft GPI-anchor transamidase complex alpha-1,6-mannosyltransferase complex dosage compensation complex icosahedral viral capsid, spike integral component of spine apparatus membrane organelle lumen extracellular exosome complex virion nucleoid cytoplasmic side of dendritic spine plasma membrane subsynaptic reticulum icosahedral viral capsid, collar viral outer capsid viral intermediate capsid viral inner capsid icosahedral viral capsid, neck spine apparatus membrane stereocilium extrinsic component of postsynaptic membrane female germline ring canal outer rim extracellular isoamylase complex nuclear membrane complex Bqt3-Bqt4 intrinsic component of postsynaptic membrane extracellular core region of desmosome oxidoreductase complex organellar ribosome Dxr protein complex PTEN phosphatase complex cell-cell junction plastid nucleoid TRAPPI protein complex eif4e-cup complex extracellular space curli dendritic spine neck Autapse prospore membrane mitochondrial membrane part bacterial-type flagellum part plasma membrane-derived thylakoid photosystem II kinocilium chaperone-mediated autophagy translocation complex extracellular matrix extracellular organelle
mitochondrial nucleoid photosystem II oxygen evolving complex alpha-1,6-mannosyltransferase complex
action less
action find_tuple_counts
relation part of
type cellular component
type cellular component
action count
action filter_type
action find
entity postsynaptic endosome membrane
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?i WHERE { { SELECT DISTINCT ?i ( COUNT ( ?s ) AS ?y ) WHERE { ?i property:part_of ?s . ?i rdf:type ontology:cellular_component . ?s rdf:type ontology:cellular_component } GROUP BY ?i } . { SELECT DISTINCT ( COUNT ( ?w ) AS ?u ) WHERE { resource:postsynaptic_endosome_membrane property:part_of ?w . ?w rdf:type ontology:cellular_component } } . FILTER ( ?y < ?u ) }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q14912978 Q22327015 Q22326799
P681
Q181394
USER
Which nutrients are mitochondrial nucleoid, photosystem II oxygen evolving complex and alpha-1,6-mannosyltransferase complex a cell component of ?
(c(Q181394),P681,Q14912978) (c(Q181394),P681,Q22327015) (c(Q181394),P681,Q22326799)
action union
action filter_type
action find_reverse
entity Q14912978
relation P681
type Q181394
action filter_type
action find_reverse
entity Q22327015
relation P681
type Q181394
action filter_type
action find_reverse
entity Q22326799
relation P681
type Q181394
[{'concept': 'Q181394'}, 'P681', 'Q14912978'] [{'concept': 'Q181394'}, 'P681', 'Q22327015'] [{'concept': 'Q181394'}, 'P681', 'Q22326799']
SELECT DISTINCT ?b WHERE { { ?b property:P681 resource:Q14912978 . ?b rdf:type ontology:Q181394 } UNION { ?b property:P681 resource:Q22327015 . ?b rdf:type ontology:Q181394 } }
mitochondrial nucleoid photosystem II oxygen evolving complex alpha-1,6-mannosyltransferase complex
action union
action filter_type
action find_reverse
entity mitochondrial nucleoid
relation cell component
type nutrient
action filter_type
action find_reverse
entity photosystem II oxygen evolving complex
relation cell component
type nutrient
action filter_type
action find_reverse
entity alpha-1,6-mannosyltransferase complex
relation cell component
type nutrient
[{'concept': 'nutrient'}, 'cell component', 'mitochondrial nucleoid'] [{'concept': 'nutrient'}, 'cell component', 'photosystem II oxygen evolving complex'] [{'concept': 'nutrient'}, 'cell component', 'alpha-1,6-mannosyltransferase complex']
SELECT DISTINCT ?b WHERE { { ?b property:cell_component resource:mitochondrial_nucleoid . ?b rdf:type ontology:nutrient } UNION { ?b property:cell_component resource:photosystem_II_oxygen_evolving_complex . ?b rdf:type ontology:nutrient } }
[]
nutrient
Q15335644 Q7697809 Q15315162
SYSTEM
Superoxide dismutase [Mn], mitochondrial, Telomerase reverse transcriptase, Telomerase reverse transcriptase
Q21130485 Q21432816 Q21984985 Q27552114 Q21985446 Q21125636 Q21119337 Q27548141 Q21126973 Q27547319 Q21986147 Q21103350 Q27550446 Q21108764 Q21173636 Q21497502 Q21495262 Q21494745 Q27550408 Q21124386 Q21101288 Q21989866 Q27548605 Q21495804 Q21146160 Q21991567 Q27549934 Q27549316 Q21106465 Q21498283 Q27550887 Q27548458 Q21117504 Q21985324 Q21989475 Q21990986 Q21985319 Q21106244 Q21497960 Q21121449 Q21130626 Q21121452 Q27548020 Q21495554 Q21985681 Q21991499 Q21496855 Q21110109 Q27548318 Q21101322 Q21990682 Q21114677 Q21114052 Q21110551 Q21120063 Q21135101 Q21988866 Q27551541 Q21101133 Q27551552 Q21497095 Q21987587 Q21992566 Q21983217 Q15335644 Q15315162 Q21985034 Q21134600 Q27548717 Q5628892 Q27551500 Q21983821 Q21443395 Q21101142 Q27551125 Q21109856 Q21116747 Q21115272 Q21980016 Q21980014 Q21991826 Q21991827 Q21108924 Q21120562 Q21121763 Q21154403 Q27551752 Q27549923 Q21107491 Q21106468 Q21109205 Q21436456 Q21436458 Q21109242 Q27547273 Q27547277 Q21983557 Q7697809 Q21133152 Q21991720 Q21497510 Q21495788 Q21113220 Q21498311 Q21111409 Q21990874 Q27547283 Q27550539 Q27549042 Q14912988 Q21115736 Q21992682 Q21991795 Q23613141 Q22291140 Q23477525 Q23477464 Q23476603 Q23569397 Q23572468 Q23611655 Q27547938 Q27548535 Q27549815 Q27547525 Q27549965 Q27547876 Q27549723
(c(Q181394),P681,Q14912978) (c(Q181394),P681,Q22327015) (c(Q181394),P681,Q22326799)
action union
action filter_type
action find_reverse
entity Q14912978
relation P681
type Q181394
action filter_type
action find_reverse
entity Q22327015
relation P681
type Q181394
action filter_type
action find_reverse
entity Q22326799
relation P681
type Q181394
[ANSWERS] are mitochondrial nucleoid, photosystem II oxygen evolving complex and alpha-1,6-mannosyltransferase complex a cell component of
[{'concept': 'Q181394'}, 'P681', 'Q14912978'] [{'concept': 'Q181394'}, 'P681', 'Q22327015'] [{'concept': 'Q181394'}, 'P681', 'Q22326799']
SELECT DISTINCT ?b WHERE { { ?b property:P681 resource:Q14912978 . ?b rdf:type ontology:Q181394 } UNION { ?b property:P681 resource:Q22327015 . ?b rdf:type ontology:Q181394 } }
ADP/ATP translocase 2 ATPase family AAA domain-containing protein 3 ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial DNA-binding protein ABF2 YMR072W 3-hydroxyacyl-CoA dehydrogenase type-2 Ubiquinol-cytochrome-c reductase complex assembly factor 2 Leucine-rich repeat-containing protein 59 isocitrate dehydrogenase (NADP(+)) IDP1 YDL066W Single-stranded DNA-binding protein, mitochondrial pyruvate dehydrogenase (acetyl-transferring) subunit E1 alpha YER178W Transcription termination factor 2, mitochondrial Polymerase delta-interacting protein 2 Rim1p YCR028C-A Leucine-rich PPR motif-containing protein, mitochondrial DNA-3-methyladenine glycosylase DNA polymerase subunit gamma-1 Trifunctional enzyme subunit alpha, mitochondrial DNA-3-methyladenine glycosylase Yhm2p YMR241W DNA-directed RNA polymerase, mitochondrial FAST kinase domain-containing protein 5, mitochondrial Twinkle protein, mitochondrial chaperone ATPase HSP60 YLR259C G-rich sequence factor 1 Transcription termination factor 1, mitochondrial DNA topoisomerase I, mitochondrial L-serine/L-threonine ammonia-lyase CHA1 YCL064C F1F0 ATP synthase subunit alpha YBL099W Serine hydroxymethyltransferase, mitochondrial Probable ATP-dependent RNA helicase DDX28 succinate--CoA ligase (GDP-forming) subunit alpha YOR142W Hsp70 family ATPase ECM10 YEL030W DNA replication ATP-dependent helicase/nuclease DNA2 FAST kinase domain-containing protein 2, mitochondrial DNA-directed RNA polymerase, mitochondrial Zinc phosphodiesterase ELAC protein 2 FAST kinase domain-containing protein 5, mitochondrial G-rich sequence factor 1 Very long-chain specific acyl-CoA dehydrogenase, mitochondrial Dimethyladenosine transferase 1, mitochondrial Voltage-dependent anion-selective channel protein 2 Dimethyladenosine transferase 2, mitochondrial aconitate hydratase ACO1 YLR304C Elongation factor Tu, mitochondrial Leucine-rich repeat-containing protein 59 ATP-dependent RNA helicase SUPV3L1, mitochondrial ADP/ATP translocase 2 Stress-70 protein, mitochondrial alpha-ketoglutarate dehydrogenase KGD2 YDR148C FAST kinase domain-containing protein 2, mitochondrial Transcription elongation factor, mitochondrial Mitochondrial ribonuclease P protein 1 Putative ATP-dependent RNA helicase DHX30 Lon protease homolog, mitochondrial Transcription termination factor 2, mitochondrial DNA topoisomerase I, mitochondrial Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial pyruvate dehydrogenase (acetyl-transferring) subunit E1 beta YBR221C DNA polymerase subunit gamma-1 acetolactate synthase regulatory subunit YCL009C Voltage-dependent anion-selective channel protein 2 Lon protease homolog, mitochondrial Ubiquinol-cytochrome-c reductase complex assembly factor 2 Putative ATP-dependent RNA helicase DHX30 Superoxide dismutase [Mn], mitochondrial Telomerase reverse transcriptase Leucine-rich PPR motif-containing protein, mitochondrial Transcription elongation factor, mitochondrial DNA-directed RNA polymerase YFL036W Trifunctional enzyme subunit beta, mitochondrial alpha-ketoglutarate dehydrogenase KGD1 YIL125W Carbamoyl-phosphate synthase [ammonia], mitochondrial Twinkle protein, mitochondrial DNA polymerase subunit gamma-2, mitochondrial dihydrolipoyl dehydrogenase YFL018C ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial ATPase family AAA domain-containing protein 3A Very long-chain specific acyl-CoA dehydrogenase, mitochondrial Mitochondrial ribonuclease P protein 3 Mitochondrial ribonuclease P protein 1 Dimethyladenosine transferase 2, mitochondrial Dimethyladenosine transferase 1, mitochondrial ATP-dependent RNA helicase SUPV3L1, mitochondrial Zinc phosphodiesterase ELAC protein 2 Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial Transcription factor A, mitochondrial isocitrate dehydrogenase (NAD(+)) IDH1 YNL037C mitochondrial nucleoid protein MNP1 YGL068W DnaJ (Hsp40) homolog, subfamily A, member 3 variant Elongation factor Tu, mitochondrial ATP synthase subunit beta, mitochondrial Transcription termination factor 1b, mitochondrial Transcription termination factor 1a, mitochondrial Carbamoyl-phosphate synthase [ammonia], mitochondrial Mgm101p YJR144W aldehyde dehydrogenase (NADP(+)) ALD4 YOR374W ATP synthase subunit beta, mitochondrial Telomerase reverse transcriptase Voltage-dependent anion-selective channel protein 1 Single-stranded DNA-binding protein, mitochondrial DNA polymerase subunit gamma-2, mitochondrial Stress-70 protein, mitochondrial Trifunctional enzyme subunit alpha, mitochondrial DNA replication ATP-dependent helicase/nuclease DNA2 DnaJ homolog subfamily A member 3, mitochondrial Polymerase delta-interacting protein 2 ketol-acid reductoisomerase YLR355C Hsp70 family ATPase SSC1 YJR045C Sls1p YLR139C Trifunctional enzyme subunit beta, mitochondrial Probable ATP-dependent RNA helicase DDX28 Voltage-dependent anion-selective channel protein 1 Transcription factor A, mitochondrial photosystem II manganese-stabilizing polypeptide    tll0444 hypothetical protein    TDE0457 Photosystem II reaction centre W protein    Pro_0771 Photosystem II protein P PsbP    Pro_1097 Photosystem II manganese-stabilizing protein PsbO    Pro_0257 photosystem II manganese-stabilizing polypeptide    gvip499 hypothetical protein    gvip391 photosystem II oxygen-evolving complex 23K protein PsbP-like protein    tlr2075 alpha-1,6-mannosyltransferase YJR075W Anp1p YEL036C alpha-1,6-mannosyltransferase YDR245W mannosyltransferase complex subunit MNN9 YPL050C Van1p YML115C Och1p YGL038C alpha-1,6-mannosyltransferase YJL183W
Superoxide dismutase [Mn], mitochondrial, Telomerase reverse transcriptase and Telomerase reverse transcriptase are mitochondrial nucleoid, photosystem II oxygen evolving complex and alpha-1,6-mannosyltransferase complex a cell component of
Superoxide dismutase [Mn], mitochondrial Telomerase reverse transcriptase Telomerase reverse transcriptase
action union
action filter_type
action find_reverse
entity mitochondrial nucleoid
relation cell component
type nutrient
action filter_type
action find_reverse
entity photosystem II oxygen evolving complex
relation cell component
type nutrient
action filter_type
action find_reverse
entity alpha-1,6-mannosyltransferase complex
relation cell component
type nutrient
[{'concept': 'nutrient'}, 'cell component', 'mitochondrial nucleoid'] [{'concept': 'nutrient'}, 'cell component', 'photosystem II oxygen evolving complex'] [{'concept': 'nutrient'}, 'cell component', 'alpha-1,6-mannosyltransferase complex']
SELECT DISTINCT ?b WHERE { { ?b property:cell_component resource:mitochondrial_nucleoid . ?b rdf:type ontology:nutrient } UNION { ?b property:cell_component resource:photosystem_II_oxygen_evolving_complex . ?b rdf:type ontology:nutrient } }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q15335644 Q7697809 Q15315162
P702
Q863908
USER
Which nucleic acid sequences encode those nutrients ?
(Q15335644,P702,c(Q863908)) (Q7697809,P702,c(Q863908)) (Q15315162,P702,c(Q863908))
action filter_type
action find
entity prev_answer
relation P702
type Q863908
['Q15335644', 'P702', {'concept': 'Q863908'}] ['Q7697809', 'P702', {'concept': 'Q863908'}] ['Q15315162', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?d property:P702 ?g . VALUES ( ?d ) { ( resource:Q21130485 ) ( resource:Q21432816 ) ( resource:Q21984985 ) } . ?g rdf:type ontology:Q863908 }
Superoxide dismutase [Mn], mitochondrial Telomerase reverse transcriptase Telomerase reverse transcriptase
action filter_type
action find
entity prev_answer
relation encoded by
type nucleic acid sequence
['Superoxide dismutase [Mn], mitochondrial', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Telomerase reverse transcriptase', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Telomerase reverse transcriptase', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?d property:encoded_by ?g . VALUES ( ?d ) { ( resource:ADP/ATP_translocase_2 ) ( resource:ATPase_family_AAA_domain-containing_protein_3 ) ( resource:ATP-dependent_Clp_protease_ATP-binding_subunit_clpX-like,_mitochondrial ) } . ?g rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q15335617 Q15315135 Q15315140
SYSTEM
Sod2, TERT, Tert
Q15335617 Q15315135 Q15315140
(Q15335644,P702,c(Q863908)) (Q7697809,P702,c(Q863908)) (Q15315162,P702,c(Q863908))
action filter_type
action find
entity prev_answer
relation P702
type Q863908
[ANSWERS] encode those nutrients
['Q15335644', 'P702', {'concept': 'Q863908'}] ['Q7697809', 'P702', {'concept': 'Q863908'}] ['Q15315162', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?d property:P702 ?g . VALUES ( ?d ) { ( resource:Q21130485 ) ( resource:Q21432816 ) ( resource:Q21984985 ) } . ?g rdf:type ontology:Q863908 }
Sod2 TERT Tert
Sod2, TERT and Tert encode those nutrients
Sod2 TERT Tert
action filter_type
action find
entity prev_answer
relation encoded by
type nucleic acid sequence
['Superoxide dismutase [Mn], mitochondrial', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Telomerase reverse transcriptase', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Telomerase reverse transcriptase', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?d property:encoded_by ?g . VALUES ( ?d ) { ( resource:ADP/ATP_translocase_2 ) ( resource:ATPase_family_AAA_domain-containing_protein_3 ) ( resource:ATP-dependent_Clp_protease_ATP-binding_subunit_clpX-like,_mitochondrial ) } . ?g rdf:type ontology:nucleic_acid_sequence }
[]