Simple Question (Direct)
Simple Question
Q27474190
P680
Q44424
USER
Which chemical bond represents molecular function of DNA repair protein RadA    SDY_4650 ?
(Q27474190,P680,c(Q44424))
action filter_type
action find
entity Q27474190
relation P680
type Q44424
['Q27474190', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?v WHERE { resource:Q27474190 property:P680 ?v . ?v rdf:type ontology:Q44424 }
DNA repair protein RadA    SDY_4650
action filter_type
action find
entity DNA repair protein RadA    SDY_4650
relation molecular function
type chemical bond
['DNA repair protein RadA    SDY_4650', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?v WHERE { resource:DNA_repair_protein_RadA____SDY_4650 property:molecular_function ?v . ?v rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380
SYSTEM
metal ion binding
Q13667380
(Q27474190,P680,c(Q44424))
action filter_type
action find
entity Q27474190
relation P680
type Q44424
The [ANSWER] represents molecular function of DNA repair protein RadA SDY_4650
['Q27474190', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?v WHERE { resource:Q27474190 property:P680 ?v . ?v rdf:type ontology:Q44424 }
metal ion binding
The metal ion binding represents molecular function of DNA repair protein RadA SDY_4650
metal ion binding
action filter_type
action find
entity DNA repair protein RadA    SDY_4650
relation molecular function
type chemical bond
['DNA repair protein RadA    SDY_4650', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?v WHERE { resource:DNA_repair_protein_RadA____SDY_4650 property:molecular_function ?v . ?v rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27474190
P688
Q863908
USER
Which nucleic acid sequence encodes DNA repair protein RadA    SDY_4650 ?
(c(Q863908),P688,Q27474190)
action filter_type
action find_reverse
entity Q27474190
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27474190']
SELECT DISTINCT ?l WHERE { ?l property:P688 resource:Q27474190 . ?l rdf:type ontology:Q863908 }
DNA repair protein RadA    SDY_4650
action filter_type
action find_reverse
entity DNA repair protein RadA    SDY_4650
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'DNA repair protein RadA    SDY_4650']
SELECT DISTINCT ?l WHERE { ?l property:encodes resource:DNA_repair_protein_RadA____SDY_4650 . ?l rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23136895
SYSTEM
DNA repair protein RadA    SDY_4650
Q23136895
(c(Q863908),P688,Q27474190)
action filter_type
action find_reverse
entity Q27474190
relation P688
type Q863908
DNA repair protein RadA SDY 4650 encodes DNA repair protein RadA SDY_4650
[{'concept': 'Q863908'}, 'P688', 'Q27474190']
SELECT DISTINCT ?l WHERE { ?l property:P688 resource:Q27474190 . ?l rdf:type ontology:Q863908 }
DNA repair protein RadA    SDY_4650
DNA repair protein RadA SDY 4650 encodes DNA repair protein RadA SDY_4650
DNA repair protein RadA    SDY_4650
action filter_type
action find_reverse
entity DNA repair protein RadA    SDY_4650
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'DNA repair protein RadA    SDY_4650']
SELECT DISTINCT ?l WHERE { ?l property:encodes resource:DNA_repair_protein_RadA____SDY_4650 . ?l rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q23136895 Q21102940
P703
Q631147
USER
Does DNA repair protein RadA    SDY_4650 belong to Shigella dysenteriae Sd197 ?
(Q23136895,P703,Q21102940)
action is_in
entity Q21102940
action find
entity Q23136895
relation P703
['Q23136895', 'P703', 'Q21102940']
ASK WHERE { resource:Q23136895 property:P703 resource:Q21102940 }
DNA repair protein RadA    SDY_4650 Shigella dysenteriae Sd197
action is_in
entity Shigella dysenteriae Sd197
action find
entity DNA repair protein RadA    SDY_4650
relation found in taxon
['DNA repair protein RadA    SDY_4650', 'found in taxon', 'Shigella dysenteriae Sd197']
ASK WHERE { resource:DNA_repair_protein_RadA____SDY_4650 property:found_in_taxon resource:Shigella_dysenteriae_Sd197 }
[]
infraspecific name
SYSTEM
YES
(Q23136895,P703,Q21102940)
action is_in
entity Q21102940
action find
entity Q23136895
relation P703
[ANSWER]
['Q23136895', 'P703', 'Q21102940']
ASK WHERE { resource:Q23136895 property:P703 resource:Q21102940 }
Yes
action is_in
entity Shigella dysenteriae Sd197
action find
entity DNA repair protein RadA    SDY_4650
relation found in taxon
['DNA repair protein RadA    SDY_4650', 'found in taxon', 'Shigella dysenteriae Sd197']
ASK WHERE { resource:DNA_repair_protein_RadA____SDY_4650 property:found_in_taxon resource:Shigella_dysenteriae_Sd197 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27474190
P702
Q863908
USER
Which gene encodes DNA repair protein RadA    SDY_4650 ?
(Q27474190,P702,c(Q863908))
action filter_type
action find
entity Q27474190
relation P702
type Q863908
['Q27474190', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?k WHERE { resource:Q27474190 property:P702 ?k . ?k rdf:type ontology:Q863908 }
DNA repair protein RadA    SDY_4650
action filter_type
action find
entity DNA repair protein RadA    SDY_4650
relation encoded by
type nucleic acid sequence
['DNA repair protein RadA    SDY_4650', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?k WHERE { resource:DNA_repair_protein_RadA____SDY_4650 property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23136895
SYSTEM
DNA repair protein RadA    SDY_4650
Q23136895
(Q27474190,P702,c(Q863908))
action filter_type
action find
entity Q27474190
relation P702
type Q863908
DNA repair protein RadA SDY 4650 encodes DNA repair protein RadA SDY_4650
['Q27474190', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?k WHERE { resource:Q27474190 property:P702 ?k . ?k rdf:type ontology:Q863908 }
DNA repair protein RadA    SDY_4650
DNA repair protein RadA SDY 4650 encodes DNA repair protein RadA SDY_4650
DNA repair protein RadA    SDY_4650
action filter_type
action find
entity DNA repair protein RadA    SDY_4650
relation encoded by
type nucleic acid sequence
['DNA repair protein RadA    SDY_4650', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?k WHERE { resource:DNA_repair_protein_RadA____SDY_4650 property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q27474190
P703
Q631147
USER
How many infraspecific names are DNA repair protein RadA    SDY_4650 found in ?
(Q27474190,P703,c(Q631147))
action count
action filter_type
action find
entity Q27474190
relation P703
type Q631147
['Q27474190', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?h ) WHERE { resource:Q27474190 property:P703 ?o . ?o rdf:type ontology:Q631147 }
DNA repair protein RadA    SDY_4650
action count
action filter_type
action find
entity DNA repair protein RadA    SDY_4650
relation found in taxon
type infraspecific name
['DNA repair protein RadA    SDY_4650', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?h ) WHERE { resource:DNA_repair_protein_RadA____SDY_4650 property:found_in_taxon ?o . ?o rdf:type ontology:infraspecific_name }
[]
infraspecific name
SYSTEM
1
Q21102940
(Q27474190,P703,c(Q631147))
action count
action filter_type
action find
entity Q27474190
relation P703
type Q631147
[ANSWER]
['Q27474190', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?h ) WHERE { resource:Q27474190 property:P703 ?o . ?o rdf:type ontology:Q631147 }
Shigella dysenteriae Sd197
1
action count
action filter_type
action find
entity DNA repair protein RadA    SDY_4650
relation found in taxon
type infraspecific name
['DNA repair protein RadA    SDY_4650', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?h ) WHERE { resource:DNA_repair_protein_RadA____SDY_4650 property:found_in_taxon ?o . ?o rdf:type ontology:infraspecific_name }
[]