Simple Question (Direct)
Simple Question
Q14885017
P682
Q1057
USER
What is the metabolic process that Dihydropteridine reductase is involved in ?
(Q14885017,P682,c(Q1057))
action filter_type
action find
entity Q14885017
relation P682
type Q1057
['Q14885017', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:Q1057 . resource:Q14885017 property:P682 ?z }
Dihydropteridine reductase
action filter_type
action find
entity Dihydropteridine reductase
relation biological process
type metabolic process
['Dihydropteridine reductase', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:metabolic_process . resource:Dihydropteridine_reductase property:biological_process ?z }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q14885017,P682,c(Q1057))
action filter_type
action find
entity Q14885017
relation P682
type Q1057
The metabolic process that Dihydropteridine reductase is involved in is the [ANSWER]
['Q14885017', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:Q1057 . resource:Q14885017 property:P682 ?z }
oxidation-reduction process
The metabolic process that Dihydropteridine reductase is involved in is the oxidation-reduction process
oxidation-reduction process
action filter_type
action find
entity Dihydropteridine reductase
relation biological process
type metabolic process
['Dihydropteridine reductase', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:metabolic_process . resource:Dihydropteridine_reductase property:biological_process ?z }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q14885017
P688
Q863908
USER
Which nucleic acid sequences encode that nutrient ?
(c(Q863908),P688,Q14349764)
action filter_type
action find_reverse
entity Q14885017
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q14349764']
SELECT DISTINCT ?s WHERE { ?s property:P688 resource:Q14885017 . ?s rdf:type ontology:Q863908 }
Dihydropteridine reductase
action filter_type
action find_reverse
entity Dihydropteridine reductase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'oxidation-reduction process']
SELECT DISTINCT ?s WHERE { ?s property:encodes resource:Dihydropteridine_reductase . ?s rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q14885001 Q21511877
SYSTEM
Qdpr, LOC102643271
Q14885001 Q21511877
(c(Q863908),P688,Q14349764)
action filter_type
action find_reverse
entity Q14885017
relation P688
type Q863908
[ANSWERS] encode that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q14349764']
SELECT DISTINCT ?s WHERE { ?s property:P688 resource:Q14885017 . ?s rdf:type ontology:Q863908 }
Qdpr LOC102643271
Qdpr and LOC102643271 encode that nutrient
Qdpr LOC102643271
action filter_type
action find_reverse
entity Dihydropteridine reductase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'oxidation-reduction process']
SELECT DISTINCT ?s WHERE { ?s property:encodes resource:Dihydropteridine_reductase . ?s rdf:type ontology:nucleic_acid_sequence }
[]
Clarification
Simple Question|Single Entity|Indirect
Q21511877
P703
Q16521
USER
Which taxon is that nucleic acid sequence found in ?
(Q21511877,P703,c(Q16521))
action filter_type
action find
entity Q21511877
relation P703
type Q16521
['Q21511877', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?n WHERE { resource:Q21511877 property:P703 ?n . ?n rdf:type ontology:Q16521 }
LOC102643271
action filter_type
action find
entity LOC102643271
relation found in taxon
type taxon
['LOC102643271', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?n WHERE { resource:LOC102643271 property:found_in_taxon ?n . ?n rdf:type ontology:taxon }
[]
taxon
Clarification for simple ques.
Q14885001
SYSTEM
Did you mean Qdpr ?
Q14885001 Q21511877
(Q14885001,P703,c(Q16521)) (Q21511877,P703,c(Q16521))
[ANSWER]
['Q14885001', 'P703', {'concept': 'Q16521'}] ['Q21511877', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?n WHERE { resource:Q21511877 property:P703 ?n . ?n rdf:type ontology:Q16521 }
Qdpr LOC102643271
Did you mean Qdpr ?
Qdpr
['Qdpr', 'found in taxon', {'concept': 'taxon'}] ['LOC102643271', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?n WHERE { resource:LOC102643271 property:found_in_taxon ?n . ?n rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
USER
No, I meant LOC102643271. Could you tell me the answer for that?
(Q21511877,P703,c(Q16521))
Q21511877
['Q21511877', 'P703', {'concept': 'Q16521'}]
['LOC102643271', 'found in taxon', {'concept': 'taxon'}]
[]
Q83310
SYSTEM
Mus musculus
Q83310
(Q21511877,P703,c(Q16521))
action filter_type
action find
entity Q21511877
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
['Q21511877', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?n WHERE { resource:Q21511877 property:P703 ?n . ?n rdf:type ontology:Q16521 }
Mus musculus
That nucleic acid sequence is found in Mus musculus
Mus musculus
action filter_type
action find
entity LOC102643271
relation found in taxon
type taxon
['LOC102643271', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?n WHERE { resource:LOC102643271 property:found_in_taxon ?n . ?n rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q83310 Q18309501
P703
Q863908
USER
Is Gm12099 found in that taxon ?
(Q18309501,P703,Q83310)
action is_in
entity Q83310
action find
entity Q18309501
relation P703
['Q18309501', 'P703', 'Q83310']
ASK WHERE { resource:Q18309501 property:P703 resource:Q83310 }
Mus musculus Gm12099
action is_in
entity Mus musculus
action find
entity Gm12099
relation found in taxon
['Gm12099', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Gm12099 property:found_in_taxon resource:Mus_musculus }
[]
nucleic acid sequence
SYSTEM
YES
(Q18309501,P703,Q83310)
action is_in
entity Q83310
action find
entity Q18309501
relation P703
[ANSWER]
['Q18309501', 'P703', 'Q83310']
ASK WHERE { resource:Q18309501 property:P703 resource:Q83310 }
Yes
action is_in
entity Mus musculus
action find
entity Gm12099
relation found in taxon
['Gm12099', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Gm12099 property:found_in_taxon resource:Mus_musculus }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q21511877 Q23495330 Q23451428
P688
Q181394
USER
Does LOC102643271 encode Cof family protein    spr0824 and hypothetical protein    BF0286 ?
(Q21511877,P688,Q23495330) (Q21511877,P688,Q23451428)
action is_in
entity Q21511877
action intersection
action find_reverse
entity Q23495330
relation P688
action find_reverse
entity Q23451428
relation P688
['Q21511877', 'P688', 'Q23495330'] ['Q21511877', 'P688', 'Q23451428']
ASK WHERE { resource:Q21511877 property:P688 resource:Q23495330 . resource:Q21511877 property:P688 resource:Q23451428 }
LOC102643271 Cof family protein    spr0824 hypothetical protein    BF0286
action is_in
entity LOC102643271
action intersection
action find_reverse
entity Cof family protein    spr0824
relation encodes
action find_reverse
entity hypothetical protein    BF0286
relation encodes
['LOC102643271', 'encodes', 'Cof family protein    spr0824'] ['LOC102643271', 'encodes', 'hypothetical protein    BF0286']
ASK WHERE { resource:LOC102643271 property:encodes resource:Cof_family_protein____spr0824 . resource:LOC102643271 property:encodes resource:hypothetical_protein____BF0286 }
[]
nutrient
SYSTEM
NO
(Q21511877,P688,Q23495330) (Q21511877,P688,Q23451428)
action is_in
entity Q21511877
action intersection
action find_reverse
entity Q23495330
relation P688
action find_reverse
entity Q23451428
relation P688
[ANSWER]
['Q21511877', 'P688', 'Q23495330'] ['Q21511877', 'P688', 'Q23451428']
ASK WHERE { resource:Q21511877 property:P688 resource:Q23495330 . resource:Q21511877 property:P688 resource:Q23451428 }
No
action is_in
entity LOC102643271
action intersection
action find_reverse
entity Cof family protein    spr0824
relation encodes
action find_reverse
entity hypothetical protein    BF0286
relation encodes
['LOC102643271', 'encodes', 'Cof family protein    spr0824'] ['LOC102643271', 'encodes', 'hypothetical protein    BF0286']
ASK WHERE { resource:LOC102643271 property:encodes resource:Cof_family_protein____spr0824 . resource:LOC102643271 property:encodes resource:hypothetical_protein____BF0286 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q14885017
P681
Q15989253
USER
How many parts are the cell components of Dihydropteridine reductase ?
(Q14885017,P681,c(Q15989253))
action count
action filter_type
action find
entity Q14885017
relation P681
type Q15989253
['Q14885017', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?r ) WHERE { resource:Q14885017 property:P681 ?j . ?j rdf:type ontology:Q15989253 }
Dihydropteridine reductase
action count
action filter_type
action find
entity Dihydropteridine reductase
relation cell component
type part
['Dihydropteridine reductase', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?r ) WHERE { resource:Dihydropteridine_reductase property:cell_component ?j . ?j rdf:type ontology:part }
[]
part
SYSTEM
2
Q39572 Q79899
(Q14885017,P681,c(Q15989253))
action count
action filter_type
action find
entity Q14885017
relation P681
type Q15989253
[ANSWER]
['Q14885017', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?r ) WHERE { resource:Q14885017 property:P681 ?j . ?j rdf:type ontology:Q15989253 }
mitochondrion cytoplasm
2
action count
action filter_type
action find
entity Dihydropteridine reductase
relation cell component
type part
['Dihydropteridine reductase', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?r ) WHERE { resource:Dihydropteridine_reductase property:cell_component ?j . ?j rdf:type ontology:part }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q23603678
Q15989253
USER
And also tell me about hypothetical protein    FP0599?
(Q23603678,P681,c(Q15989253))
action count
action filter_type
action find
entity Q23603678
relation P681
type Q15989253
['Q23603678', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?s ) WHERE { ?l rdf:type ontology:Q15989253 . resource:Q23603678 property:P681 ?l }
hypothetical protein    FP0599
action count
action filter_type
action find
entity hypothetical protein    FP0599
relation cell component
type part
['hypothetical protein    FP0599', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?s ) WHERE { ?l rdf:type ontology:part . resource:hypothetical_protein____FP0599 property:cell_component ?l }
[]
part
SYSTEM
1
(Q23603678,P681,c(Q15989253))
action count
action filter_type
action find
entity Q23603678
relation P681
type Q15989253
[ANSWER]
['Q23603678', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?s ) WHERE { ?l rdf:type ontology:Q15989253 . resource:Q23603678 property:P681 ?l }
1
action count
action filter_type
action find
entity hypothetical protein    FP0599
relation cell component
type part
['hypothetical protein    FP0599', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?s ) WHERE { ?l rdf:type ontology:part . resource:hypothetical_protein____FP0599 property:cell_component ?l }
[]
Quantitative Reasoning (All)
Quantitative|Min/Max|Mult. entity type
P138
Q355304 Q56061 Q16521
USER
Which taxons are the eponym of max number of watercourses or administrative territories ?
(c(Q16521),P138,c(Q355304)|c(Q56061))
action argmax
action union
action find_tuple_counts
relation P138
type Q16521
type Q355304
action find_tuple_counts
relation P138
type Q16521
type Q56061
[{'concept': 'Q16521'}, 'P138', [{'concept': 'Q355304'}, {'concept': 'Q56061'}]]
SELECT DISTINCT ?z WHERE { { SELECT DISTINCT ( MAX ( ?y ) AS ?u ) { SELECT DISTINCT ?s ( COUNT ( ?c ) AS ?y ) WHERE { { ?s property:P138 ?c . ?s rdf:type ontology:Q16521 . ?c rdf:type ontology:Q355304 } UNION { ?s rdf:type ontology:Q16521 . ?c rdf:type ontology:Q56061 . ?s property:P138 ?c } } GROUP BY ?s } } . { SELECT DISTINCT ?z ( COUNT ( ?m ) AS ?i ) WHERE { { ?z property:P138 ?m . ?z rdf:type ontology:Q16521 . ?m rdf:type ontology:Q355304 } UNION { ?z property:P138 ?m . ?z rdf:type ontology:Q16521 . ?m rdf:type ontology:Q56061 } } GROUP BY ?z } . FILTER ( ?i = ?u ) }
action argmax
action union
action find_tuple_counts
relation named after
type taxon
type watercourse
action find_tuple_counts
relation named after
type taxon
type administrative territorial entity
[{'concept': 'taxon'}, 'named after', [{'concept': 'watercourse'}, {'concept': 'administrative territorial entity'}]]
SELECT DISTINCT ?z WHERE { { SELECT DISTINCT ( MAX ( ?y ) AS ?u ) { SELECT DISTINCT ?s ( COUNT ( ?c ) AS ?y ) WHERE { { ?s property:named_after ?c . ?s rdf:type ontology:taxon . ?c rdf:type ontology:watercourse } UNION { ?s rdf:type ontology:taxon . ?c rdf:type ontology:administrative_territorial_entity . ?s property:named_after ?c } } GROUP BY ?s } } . { SELECT DISTINCT ?z ( COUNT ( ?m ) AS ?i ) WHERE { { ?z property:named_after ?m . ?z rdf:type ontology:taxon . ?m rdf:type ontology:watercourse } UNION { ?z property:named_after ?m . ?z rdf:type ontology:taxon . ?m rdf:type ontology:administrative_territorial_entity } } GROUP BY ?z } . FILTER ( ?i = ?u ) }
[]
watercourse administrative territorial entity taxon
Q5167218 Q15711073 Q1041733
SYSTEM
Cooktownia, Doryphoribius huangguoshuensis, Carlina sitiensis
Q15711073 Q15576199 Q14624324 Q15078246 Q14325463 Q1934785 Q2704671 Q15648391 Q5801946 Q15493694 Q1041733 Q15728416 Q3089314 Q516494 Q3757391 Q1934813 Q19773657 Q5167218 Q7181156 Q20739798 Q18863953
(c(Q16521),P138,c(Q355304)|c(Q56061))
action argmax
action union
action find_tuple_counts
relation P138
type Q16521
type Q355304
action find_tuple_counts
relation P138
type Q16521
type Q56061
[ANSWERS] are the eponym of max number of watercourses or administrative territories
[{'concept': 'Q16521'}, 'P138', [{'concept': 'Q355304'}, {'concept': 'Q56061'}]]
SELECT DISTINCT ?z WHERE { { SELECT DISTINCT ( MAX ( ?y ) AS ?u ) { SELECT DISTINCT ?s ( COUNT ( ?c ) AS ?y ) WHERE { { ?s property:P138 ?c . ?s rdf:type ontology:Q16521 . ?c rdf:type ontology:Q355304 } UNION { ?s rdf:type ontology:Q16521 . ?c rdf:type ontology:Q56061 . ?s property:P138 ?c } } GROUP BY ?s } } . { SELECT DISTINCT ?z ( COUNT ( ?m ) AS ?i ) WHERE { { ?z property:P138 ?m . ?z rdf:type ontology:Q16521 . ?m rdf:type ontology:Q355304 } UNION { ?z property:P138 ?m . ?z rdf:type ontology:Q16521 . ?m rdf:type ontology:Q56061 } } GROUP BY ?z } . FILTER ( ?i = ?u ) }
Doryphoribius huangguoshuensis Silene thessalonica Carinigera thessalonica Aloe abhaica Anguis veronensis Ichthyophis singaporensis Acanthobrama telavivensis Xi River virus Delosperma aberdeenense Sedum copalense Carlina sitiensis Blue River virus Fruitachampsa callisoni Citrus ×tangerina Rize goby Ichthyophis bombayensis Enyalioides altotambo Cooktownia Phebalium daviesii Dictis mumbaiensis Mayaro virus
Cooktownia, Doryphoribius huangguoshuensis and Carlina sitiensis are the eponym of max number of watercourses or administrative territories
Cooktownia Doryphoribius huangguoshuensis Carlina sitiensis
action argmax
action union
action find_tuple_counts
relation named after
type taxon
type watercourse
action find_tuple_counts
relation named after
type taxon
type administrative territorial entity
[{'concept': 'taxon'}, 'named after', [{'concept': 'watercourse'}, {'concept': 'administrative territorial entity'}]]
SELECT DISTINCT ?z WHERE { { SELECT DISTINCT ( MAX ( ?y ) AS ?u ) { SELECT DISTINCT ?s ( COUNT ( ?c ) AS ?y ) WHERE { { ?s property:named_after ?c . ?s rdf:type ontology:taxon . ?c rdf:type ontology:watercourse } UNION { ?s rdf:type ontology:taxon . ?c rdf:type ontology:administrative_territorial_entity . ?s property:named_after ?c } } GROUP BY ?s } } . { SELECT DISTINCT ?z ( COUNT ( ?m ) AS ?i ) WHERE { { ?z property:named_after ?m . ?z rdf:type ontology:taxon . ?m rdf:type ontology:watercourse } UNION { ?z property:named_after ?m . ?z rdf:type ontology:taxon . ?m rdf:type ontology:administrative_territorial_entity } } GROUP BY ?z } . FILTER ( ?i = ?u ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23144082 Q23495330
P703
Q631147
USER
Which infraspecific names do Cof family protein    spr0824 or metallophosphoesterase    Psyr_4691 belong to ?
OR((Q23495330,P703,c(Q631147)), (Q23144082,P703,c(Q631147)))
action filter_type
action union
action find
entity Q23495330
relation P703
action find
entity Q23144082
relation P703
type Q631147
{'OR': [['Q23495330', 'P703', {'concept': 'Q631147'}], ['Q23144082', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?a WHERE { { VALUES ( ?l ) { ( resource:Q23495330 ) ( resource:Q23144082 ) } . ?l property:P703 ?a } . ?a rdf:type ontology:Q631147 }
metallophosphoesterase    Psyr_4691 Cof family protein    spr0824
action filter_type
action union
action find
entity Cof family protein    spr0824
relation found in taxon
action find
entity metallophosphoesterase    Psyr_4691
relation found in taxon
type infraspecific name
{'OR': [['Cof family protein    spr0824', 'found in taxon', {'concept': 'infraspecific name'}], ['metallophosphoesterase    Psyr_4691', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?a WHERE { { VALUES ( ?l ) { ( resource:Cof_family_protein____spr0824 ) ( resource:metallophosphoesterase____Psyr_4691 ) } . ?l property:found_in_taxon ?a } . ?a rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21079490 Q21102963
SYSTEM
Pseudomonas syringae pv. syringae B728a, Streptococcus pneumoniae R6
Q21079490 Q21102963
OR((Q23495330,P703,c(Q631147)), (Q23144082,P703,c(Q631147)))
action filter_type
action union
action find
entity Q23495330
relation P703
action find
entity Q23144082
relation P703
type Q631147
Cof family protein spr0824 or metallophosphoesterase Psyr_4691 belong to [ANSWERS]
{'OR': [['Q23495330', 'P703', {'concept': 'Q631147'}], ['Q23144082', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?a WHERE { { VALUES ( ?l ) { ( resource:Q23495330 ) ( resource:Q23144082 ) } . ?l property:P703 ?a } . ?a rdf:type ontology:Q631147 }
Pseudomonas syringae pv. syringae B728a Streptococcus pneumoniae R6
Cof family protein spr0824 or metallophosphoesterase Psyr_4691 belong to Pseudomonas syringae pv. syringae B728a and Streptococcus pneumoniae R6
Pseudomonas syringae pv. syringae B728a Streptococcus pneumoniae R6
action filter_type
action union
action find
entity Cof family protein    spr0824
relation found in taxon
action find
entity metallophosphoesterase    Psyr_4691
relation found in taxon
type infraspecific name
{'OR': [['Cof family protein    spr0824', 'found in taxon', {'concept': 'infraspecific name'}], ['metallophosphoesterase    Psyr_4691', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?a WHERE { { VALUES ( ?l ) { ( resource:Cof_family_protein____spr0824 ) ( resource:metallophosphoesterase____Psyr_4691 ) } . ?l property:found_in_taxon ?a } . ?a rdf:type ontology:infraspecific_name }
[]