Simple Question (Direct)
Simple Question
Q24134367
P702
Q863908
USER
What is the gene that encodes TonB-dependent siderophore receptor    ECL_01520 ?
(Q24134367,P702,c(Q863908))
action filter_type
action find
entity Q24134367
relation P702
type Q863908
['Q24134367', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q863908 . resource:Q24134367 property:P702 ?g }
TonB-dependent siderophore receptor    ECL_01520
action filter_type
action find
entity TonB-dependent siderophore receptor    ECL_01520
relation encoded by
type nucleic acid sequence
['TonB-dependent siderophore receptor    ECL_01520', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:nucleic_acid_sequence . resource:TonB-dependent_siderophore_receptor____ECL_01520 property:encoded_by ?g }
[]
nucleic acid sequence
Q23082406
SYSTEM
TonB-dependent siderophore receptor    ECL_01520
Q23082406
(Q24134367,P702,c(Q863908))
action filter_type
action find
entity Q24134367
relation P702
type Q863908
The gene that encodes TonB-dependent siderophore receptor ECL _01520 is not TonB-dependent siderophore receptor ECL 01520
['Q24134367', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q863908 . resource:Q24134367 property:P702 ?g }
TonB-dependent siderophore receptor    ECL_01520
The gene that encodes TonB-dependent siderophore receptor ECL _01520 is not TonB-dependent siderophore receptor ECL 01520
TonB-dependent siderophore receptor    ECL_01520
action filter_type
action find
entity TonB-dependent siderophore receptor    ECL_01520
relation encoded by
type nucleic acid sequence
['TonB-dependent siderophore receptor    ECL_01520', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:nucleic_acid_sequence . resource:TonB-dependent_siderophore_receptor____ECL_01520 property:encoded_by ?g }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24134367
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by TonB-dependent siderophore receptor    ECL_01520 ?
(c(Q863908),P688,Q24134367)
action filter_type
action find_reverse
entity Q24134367
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24134367']
SELECT DISTINCT ?q WHERE { ?q property:P688 resource:Q24134367 . ?q rdf:type ontology:Q863908 }
TonB-dependent siderophore receptor    ECL_01520
action filter_type
action find_reverse
entity TonB-dependent siderophore receptor    ECL_01520
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'TonB-dependent siderophore receptor    ECL_01520']
SELECT DISTINCT ?q WHERE { ?q property:encodes resource:TonB-dependent_siderophore_receptor____ECL_01520 . ?q rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23082406
SYSTEM
TonB-dependent siderophore receptor    ECL_01520
Q23082406
(c(Q863908),P688,Q24134367)
action filter_type
action find_reverse
entity Q24134367
relation P688
type Q863908
The nucleic acid sequence that is encoded by TonB-dependent siderophore receptor ECL_01520 is that TonB-dependent siderophore receptor ECL 01520
[{'concept': 'Q863908'}, 'P688', 'Q24134367']
SELECT DISTINCT ?q WHERE { ?q property:P688 resource:Q24134367 . ?q rdf:type ontology:Q863908 }
TonB-dependent siderophore receptor    ECL_01520
The nucleic acid sequence that is encoded by TonB-dependent siderophore receptor ECL_01520 is that TonB-dependent siderophore receptor ECL 01520
TonB-dependent siderophore receptor    ECL_01520
action filter_type
action find_reverse
entity TonB-dependent siderophore receptor    ECL_01520
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'TonB-dependent siderophore receptor    ECL_01520']
SELECT DISTINCT ?q WHERE { ?q property:encodes resource:TonB-dependent_siderophore_receptor____ECL_01520 . ?q rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23082406
P703
Q631147
USER
Which taxon is that nucleic acid sequence a part of ?
(Q23082406,P703,c(Q631147))
action filter_type
action find
entity Q23082406
relation P703
type Q631147
['Q23082406', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q631147 . resource:Q23082406 property:P703 ?u }
TonB-dependent siderophore receptor    ECL_01520
action filter_type
action find
entity TonB-dependent siderophore receptor    ECL_01520
relation found in taxon
type infraspecific name
['TonB-dependent siderophore receptor    ECL_01520', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:infraspecific_name . resource:TonB-dependent_siderophore_receptor____ECL_01520 property:found_in_taxon ?u }
[]
infraspecific name
Q21102928
SYSTEM
Enterobacter cloacae subsp. cloacae ATCC 13047
Q21102928
(Q23082406,P703,c(Q631147))
action filter_type
action find
entity Q23082406
relation P703
type Q631147
Species [ANSWER] is that nucleic acid sequence a part of
['Q23082406', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q631147 . resource:Q23082406 property:P703 ?u }
Enterobacter cloacae subsp. cloacae ATCC 13047
Species Enterobacter cloacae subsp. cloacae ATCC 13047 is that nucleic acid sequence a part of
Enterobacter cloacae subsp. cloacae ATCC 13047
action filter_type
action find
entity TonB-dependent siderophore receptor    ECL_01520
relation found in taxon
type infraspecific name
['TonB-dependent siderophore receptor    ECL_01520', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:infraspecific_name . resource:TonB-dependent_siderophore_receptor____ECL_01520 property:found_in_taxon ?u }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation|Incomplete
Q23079934 Q23082406
P703
Q631147
USER
And also hypothetical protein    ECL_02975
AND((Q23082406,P703,c(Q631147)), (Q23079934,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23082406
relation P703
action find
entity Q23079934
relation P703
type Q631147
{'AND': [['Q23082406', 'P703', {'concept': 'Q631147'}], ['Q23079934', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?a WHERE { resource:Q23082406 property:P703 ?a . resource:Q23079934 property:P703 ?a . ?a rdf:type ontology:Q631147 }
hypothetical protein    ECL_02975 TonB-dependent siderophore receptor    ECL_01520
action filter_type
action intersection
action find
entity TonB-dependent siderophore receptor    ECL_01520
relation found in taxon
action find
entity hypothetical protein    ECL_02975
relation found in taxon
type infraspecific name
{'AND': [['TonB-dependent siderophore receptor    ECL_01520', 'found in taxon', {'concept': 'infraspecific name'}], ['hypothetical protein    ECL_02975', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?a WHERE { resource:TonB-dependent_siderophore_receptor____ECL_01520 property:found_in_taxon ?a . resource:hypothetical_protein____ECL_02975 property:found_in_taxon ?a . ?a rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102928
SYSTEM
Enterobacter cloacae subsp. cloacae ATCC 13047
Q21102928
AND((Q23082406,P703,c(Q631147)), (Q23079934,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23082406
relation P703
action find
entity Q23079934
relation P703
type Q631147
[ANSWER]
{'AND': [['Q23082406', 'P703', {'concept': 'Q631147'}], ['Q23079934', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?a WHERE { resource:Q23082406 property:P703 ?a . resource:Q23079934 property:P703 ?a . ?a rdf:type ontology:Q631147 }
Enterobacter cloacae subsp. cloacae ATCC 13047
Enterobacter cloacae subsp. cloacae ATCC 13047
action filter_type
action intersection
action find
entity TonB-dependent siderophore receptor    ECL_01520
relation found in taxon
action find
entity hypothetical protein    ECL_02975
relation found in taxon
type infraspecific name
{'AND': [['TonB-dependent siderophore receptor    ECL_01520', 'found in taxon', {'concept': 'infraspecific name'}], ['hypothetical protein    ECL_02975', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?a WHERE { resource:TonB-dependent_siderophore_receptor____ECL_01520 property:found_in_taxon ?a . resource:hypothetical_protein____ECL_02975 property:found_in_taxon ?a . ?a rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q23079934
P702
Q181394
USER
How many nutrients do hypothetical protein    ECL_02975 encode ?
(c(Q181394),P702,Q23079934)
action count
action filter_type
action find_reverse
entity Q23079934
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23079934']
SELECT DISTINCT ( COUNT ( ?v ) AS ?e ) WHERE { ?v property:P702 resource:Q23079934 . ?v rdf:type ontology:Q181394 }
hypothetical protein    ECL_02975
action count
action filter_type
action find_reverse
entity hypothetical protein    ECL_02975
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'hypothetical protein    ECL_02975']
SELECT DISTINCT ( COUNT ( ?v ) AS ?e ) WHERE { ?v property:encoded_by resource:hypothetical_protein____ECL_02975 . ?v rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q24132086
(c(Q181394),P702,Q23079934)
action count
action filter_type
action find_reverse
entity Q23079934
relation P702
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q23079934']
SELECT DISTINCT ( COUNT ( ?v ) AS ?e ) WHERE { ?v property:P702 resource:Q23079934 . ?v rdf:type ontology:Q181394 }
hypothetical protein    ECL_02975
1
action count
action filter_type
action find_reverse
entity hypothetical protein    ECL_02975
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'hypothetical protein    ECL_02975']
SELECT DISTINCT ( COUNT ( ?v ) AS ?e ) WHERE { ?v property:encoded_by resource:hypothetical_protein____ECL_02975 . ?v rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q24132651 Q24134367
P703
Q631147
USER
Which infraspecific names are the taxon to which TonB-dependent siderophore receptor    ECL_01520 and thiosulfate sulfurtransferase    ECL_04787 belongs to ?
AND((Q24134367,P703,c(Q631147)), (Q24132651,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q24134367
relation P703
action find
entity Q24132651
relation P703
type Q631147
{'AND': [['Q24134367', 'P703', {'concept': 'Q631147'}], ['Q24132651', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?k WHERE { resource:Q24134367 property:P703 ?k . resource:Q24132651 property:P703 ?k . ?k rdf:type ontology:Q631147 }
thiosulfate sulfurtransferase    ECL_04787 TonB-dependent siderophore receptor    ECL_01520
action filter_type
action intersection
action find
entity TonB-dependent siderophore receptor    ECL_01520
relation found in taxon
action find
entity thiosulfate sulfurtransferase    ECL_04787
relation found in taxon
type infraspecific name
{'AND': [['TonB-dependent siderophore receptor    ECL_01520', 'found in taxon', {'concept': 'infraspecific name'}], ['thiosulfate sulfurtransferase    ECL_04787', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?k WHERE { resource:TonB-dependent_siderophore_receptor____ECL_01520 property:found_in_taxon ?k . resource:thiosulfate_sulfurtransferase____ECL_04787 property:found_in_taxon ?k . ?k rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102928
SYSTEM
Enterobacter cloacae subsp. cloacae ATCC 13047
Q21102928
AND((Q24134367,P703,c(Q631147)), (Q24132651,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q24134367
relation P703
action find
entity Q24132651
relation P703
type Q631147
Species [ANSWER] is the taxon to which TonB-dependent siderophore receptor ECL_01520 and thiosulfate sulfurtransferase ECL_04787 belongs to
{'AND': [['Q24134367', 'P703', {'concept': 'Q631147'}], ['Q24132651', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?k WHERE { resource:Q24134367 property:P703 ?k . resource:Q24132651 property:P703 ?k . ?k rdf:type ontology:Q631147 }
Enterobacter cloacae subsp. cloacae ATCC 13047
Species Enterobacter cloacae subsp. cloacae ATCC 13047 is the taxon to which TonB-dependent siderophore receptor ECL_01520 and thiosulfate sulfurtransferase ECL_04787 belongs to
Enterobacter cloacae subsp. cloacae ATCC 13047
action filter_type
action intersection
action find
entity TonB-dependent siderophore receptor    ECL_01520
relation found in taxon
action find
entity thiosulfate sulfurtransferase    ECL_04787
relation found in taxon
type infraspecific name
{'AND': [['TonB-dependent siderophore receptor    ECL_01520', 'found in taxon', {'concept': 'infraspecific name'}], ['thiosulfate sulfurtransferase    ECL_04787', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?k WHERE { resource:TonB-dependent_siderophore_receptor____ECL_01520 property:found_in_taxon ?k . resource:thiosulfate_sulfurtransferase____ECL_04787 property:found_in_taxon ?k . ?k rdf:type ontology:infraspecific_name }
[]