Simple Question (Direct)
Simple Question
Q23539913
P703
Q631147
USER
Which taxon is DNA-directed DNA polymerase III subunit epsilon    lp_0811 a part of ?
(Q23539913,P703,c(Q631147))
action filter_type
action find
entity Q23539913
relation P703
type Q631147
['Q23539913', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:Q631147 . resource:Q23539913 property:P703 ?v }
DNA-directed DNA polymerase III subunit epsilon    lp_0811
action filter_type
action find
entity DNA-directed DNA polymerase III subunit epsilon    lp_0811
relation found in taxon
type infraspecific name
['DNA-directed DNA polymerase III subunit epsilon    lp_0811', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:infraspecific_name . resource:DNA-directed_DNA_polymerase_III_subunit_epsilon____lp_0811 property:found_in_taxon ?v }
[]
infraspecific name
Q21102979
SYSTEM
Lactobacillus plantarum WCFS1
Q21102979
(Q23539913,P703,c(Q631147))
action filter_type
action find
entity Q23539913
relation P703
type Q631147
[ANSWER] is DNA-directed DNA polymerase III subunit epsilon lp_0811 a part of
['Q23539913', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:Q631147 . resource:Q23539913 property:P703 ?v }
Lactobacillus plantarum WCFS1
Lactobacillus plantarum WCFS1 is DNA-directed DNA polymerase III subunit epsilon lp_0811 a part of
Lactobacillus plantarum WCFS1
action filter_type
action find
entity DNA-directed DNA polymerase III subunit epsilon    lp_0811
relation found in taxon
type infraspecific name
['DNA-directed DNA polymerase III subunit epsilon    lp_0811', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:infraspecific_name . resource:DNA-directed_DNA_polymerase_III_subunit_epsilon____lp_0811 property:found_in_taxon ?v }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q21102979 Q27745717
P703
Q181394
USER
Is hemolysin A    MSMEG_3751 found in the taxon that infraspecific name ?
(Q27745717,P703,Q21102979)
action is_in
entity Q27745717
action find
entity Q21102979
relation P703
['Q27745717', 'P703', 'Q21102979']
ASK WHERE { resource:Q21102979 property:P703 resource:Q27745717 }
Lactobacillus plantarum WCFS1 hemolysin A    MSMEG_3751
action is_in
entity hemolysin A    MSMEG_3751
action find
entity Lactobacillus plantarum WCFS1
relation found in taxon
['hemolysin A    MSMEG_3751', 'found in taxon', 'Lactobacillus plantarum WCFS1']
ASK WHERE { resource:Lactobacillus_plantarum_WCFS1 property:found_in_taxon resource:hemolysin_A____MSMEG_3751 }
[]
nutrient
SYSTEM
NO
(Q27745717,P703,Q21102979)
action is_in
entity Q27745717
action find
entity Q21102979
relation P703
[ANSWER]
['Q27745717', 'P703', 'Q21102979']
ASK WHERE { resource:Q21102979 property:P703 resource:Q27745717 }
No
action is_in
entity hemolysin A    MSMEG_3751
action find
entity Lactobacillus plantarum WCFS1
relation found in taxon
['hemolysin A    MSMEG_3751', 'found in taxon', 'Lactobacillus plantarum WCFS1']
ASK WHERE { resource:Lactobacillus_plantarum_WCFS1 property:found_in_taxon resource:hemolysin_A____MSMEG_3751 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q3249551 Q181394
USER
How many processes are atmost 9058 nutrients involved in ?
(c(Q181394),P682,c(Q3249551))
action count
action atmost
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
value 9058
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?q ) WHERE { { SELECT DISTINCT ?k ( COUNT ( ?h ) AS ?m ) WHERE { ?h property:P682 ?k . ?h rdf:type ontology:Q181394 . ?k rdf:type ontology:Q3249551 } GROUP BY ?k } . FILTER ( ?m <= 9058 ) }
action count
action atmost
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
value 9058
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?q ) WHERE { { SELECT DISTINCT ?k ( COUNT ( ?h ) AS ?m ) WHERE { ?h property:biological_process ?k . ?h rdf:type ontology:nutrient . ?k rdf:type ontology:process } GROUP BY ?k } . FILTER ( ?m <= 9058 ) }
[]
process nutrient
SYSTEM
14
Q22269718 Q306383 Q14820058 Q22284496 Q22271548 Q9332 Q22293230 Q14873025 Q14916317 Q14859560 Q14865172 Q14885910 Q14864472 Q162925
(c(Q181394),P682,c(Q3249551))
action count
action atmost
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
value 9058
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?q ) WHERE { { SELECT DISTINCT ?k ( COUNT ( ?h ) AS ?m ) WHERE { ?h property:P682 ?k . ?h rdf:type ontology:Q181394 . ?k rdf:type ontology:Q3249551 } GROUP BY ?k } . FILTER ( ?m <= 9058 ) }
locomotion G1/S transition of mitotic cell cycle growth biological regulation cell killing behavior developmental process cellular process immune system process response to stimulus signaling reproductive process rhythmic process meiotic nuclear division
14
action count
action atmost
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
value 9058
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?q ) WHERE { { SELECT DISTINCT ?k ( COUNT ( ?h ) AS ?m ) WHERE { ?h property:biological_process ?k . ?h rdf:type ontology:nutrient . ?k rdf:type ontology:process } GROUP BY ?k } . FILTER ( ?m <= 9058 ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27745717
P702
Q863908
USER
What is the gene that encodes hemolysin A    MSMEG_3751 ?
(Q27745717,P702,c(Q863908))
action filter_type
action find
entity Q27745717
relation P702
type Q863908
['Q27745717', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q27745717 property:P702 ?a . ?a rdf:type ontology:Q863908 }
hemolysin A    MSMEG_3751
action filter_type
action find
entity hemolysin A    MSMEG_3751
relation encoded by
type nucleic acid sequence
['hemolysin A    MSMEG_3751', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:hemolysin_A____MSMEG_3751 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23273011
SYSTEM
hemolysin A    MSMEG_3751
Q23273011
(Q27745717,P702,c(Q863908))
action filter_type
action find
entity Q27745717
relation P702
type Q863908
The gene that encodes hemolysin A MSMEG_3751 is not hemolysin A MSMEG 3751
['Q27745717', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q27745717 property:P702 ?a . ?a rdf:type ontology:Q863908 }
hemolysin A    MSMEG_3751
The gene that encodes hemolysin A MSMEG_3751 is not hemolysin A MSMEG 3751
hemolysin A    MSMEG_3751
action filter_type
action find
entity hemolysin A    MSMEG_3751
relation encoded by
type nucleic acid sequence
['hemolysin A    MSMEG_3751', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:hemolysin_A____MSMEG_3751 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q27744847 Q23273011
P703
Q631147
USER
Which infraspecific names are hemolysin A    MSMEG_3751 and polyprenol-monophosphomannose synthase Ppm1    MSMEG_3860 found ?
AND((Q23273011,P703,c(Q631147)), (Q27744847,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23273011
relation P703
action find
entity Q27744847
relation P703
type Q631147
{'AND': [['Q23273011', 'P703', {'concept': 'Q631147'}], ['Q27744847', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?i WHERE { resource:Q23273011 property:P703 ?i . resource:Q27744847 property:P703 ?i . ?i rdf:type ontology:Q631147 }
polyprenol-monophosphomannose synthase Ppm1    MSMEG_3860 hemolysin A    MSMEG_3751
action filter_type
action intersection
action find
entity hemolysin A    MSMEG_3751
relation found in taxon
action find
entity polyprenol-monophosphomannose synthase Ppm1    MSMEG_3860
relation found in taxon
type infraspecific name
{'AND': [['hemolysin A    MSMEG_3751', 'found in taxon', {'concept': 'infraspecific name'}], ['polyprenol-monophosphomannose synthase Ppm1    MSMEG_3860', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?i WHERE { resource:hemolysin_A____MSMEG_3751 property:found_in_taxon ?i . resource:polyprenol-monophosphomannose_synthase_Ppm1____MSMEG_3860 property:found_in_taxon ?i . ?i rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102986
SYSTEM
Mycobacterium smegmatis str. MC2 155
Q21102986
AND((Q23273011,P703,c(Q631147)), (Q27744847,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23273011
relation P703
action find
entity Q27744847
relation P703
type Q631147
[ANSWER] is hemolysin A MSMEG_3751 and polyprenol-monophosphomannose synthase Ppm1 MSMEG_3860 found
{'AND': [['Q23273011', 'P703', {'concept': 'Q631147'}], ['Q27744847', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?i WHERE { resource:Q23273011 property:P703 ?i . resource:Q27744847 property:P703 ?i . ?i rdf:type ontology:Q631147 }
Mycobacterium smegmatis str. MC2 155
Mycobacterium smegmatis str. MC2 155 is hemolysin A MSMEG_3751 and polyprenol-monophosphomannose synthase Ppm1 MSMEG_3860 found
Mycobacterium smegmatis str. MC2 155
action filter_type
action intersection
action find
entity hemolysin A    MSMEG_3751
relation found in taxon
action find
entity polyprenol-monophosphomannose synthase Ppm1    MSMEG_3860
relation found in taxon
type infraspecific name
{'AND': [['hemolysin A    MSMEG_3751', 'found in taxon', {'concept': 'infraspecific name'}], ['polyprenol-monophosphomannose synthase Ppm1    MSMEG_3860', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?i WHERE { resource:hemolysin_A____MSMEG_3751 property:found_in_taxon ?i . resource:polyprenol-monophosphomannose_synthase_Ppm1____MSMEG_3860 property:found_in_taxon ?i . ?i rdf:type ontology:infraspecific_name }
[]