Simple Question (Direct)
Simple Question
Q24128110
P682
Q1057
USER
Which metabolic process is acyl carrier protein phosphodiesterase    EAE_01360 involved in ?
(Q24128110,P682,c(Q1057))
action filter_type
action find
entity Q24128110
relation P682
type Q1057
['Q24128110', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?y WHERE { resource:Q24128110 property:P682 ?y . ?y rdf:type ontology:Q1057 }
acyl carrier protein phosphodiesterase    EAE_01360
action filter_type
action find
entity acyl carrier protein phosphodiesterase    EAE_01360
relation biological process
type metabolic process
['acyl carrier protein phosphodiesterase    EAE_01360', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?y WHERE { resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 property:biological_process ?y . ?y rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q24128110,P682,c(Q1057))
action filter_type
action find
entity Q24128110
relation P682
type Q1057
The [ANSWER] is acyl carrier protein phosphodiesterase EAE_01360 involved in
['Q24128110', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?y WHERE { resource:Q24128110 property:P682 ?y . ?y rdf:type ontology:Q1057 }
oxidation-reduction process
The oxidation-reduction process is acyl carrier protein phosphodiesterase EAE_01360 involved in
oxidation-reduction process
action filter_type
action find
entity acyl carrier protein phosphodiesterase    EAE_01360
relation biological process
type metabolic process
['acyl carrier protein phosphodiesterase    EAE_01360', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?y WHERE { resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 property:biological_process ?y . ?y rdf:type ontology:metabolic_process }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24128110
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q14349764)
action filter_type
action find_reverse
entity Q24128110
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q14349764']
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:Q863908 . ?f property:P688 resource:Q24128110 }
acyl carrier protein phosphodiesterase    EAE_01360
action filter_type
action find_reverse
entity acyl carrier protein phosphodiesterase    EAE_01360
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'oxidation-reduction process']
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:nucleic_acid_sequence . ?f property:encodes resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 }
[]
nucleic acid sequence
Q23075938
SYSTEM
acyl carrier protein phosphodiesterase    EAE_01360
Q23075938
(c(Q863908),P688,Q14349764)
action filter_type
action find_reverse
entity Q24128110
relation P688
type Q863908
The acyl carrier protein phosphodiesterase EAE 01360 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q14349764']
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:Q863908 . ?f property:P688 resource:Q24128110 }
acyl carrier protein phosphodiesterase    EAE_01360
The acyl carrier protein phosphodiesterase EAE 01360 encodes that nutrient
acyl carrier protein phosphodiesterase    EAE_01360
action filter_type
action find_reverse
entity acyl carrier protein phosphodiesterase    EAE_01360
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'oxidation-reduction process']
SELECT DISTINCT ?f WHERE { ?f rdf:type ontology:nucleic_acid_sequence . ?f property:encodes resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23075938
P703
Q631147
USER
What is the taxon to which that nucleic acid sequence belongs to ?
(Q23075938,P703,c(Q631147))
action filter_type
action find
entity Q23075938
relation P703
type Q631147
['Q23075938', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?v WHERE { resource:Q23075938 property:P703 ?v . ?v rdf:type ontology:Q631147 }
acyl carrier protein phosphodiesterase    EAE_01360
action filter_type
action find
entity acyl carrier protein phosphodiesterase    EAE_01360
relation found in taxon
type infraspecific name
['acyl carrier protein phosphodiesterase    EAE_01360', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?v WHERE { resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 property:found_in_taxon ?v . ?v rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102927
SYSTEM
Enterobacter aerogenes KCTC 2190
Q21102927
(Q23075938,P703,c(Q631147))
action filter_type
action find
entity Q23075938
relation P703
type Q631147
[ANSWER]
['Q23075938', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?v WHERE { resource:Q23075938 property:P703 ?v . ?v rdf:type ontology:Q631147 }
Enterobacter aerogenes KCTC 2190
Enterobacter aerogenes KCTC 2190
Enterobacter aerogenes KCTC 2190
action filter_type
action find
entity acyl carrier protein phosphodiesterase    EAE_01360
relation found in taxon
type infraspecific name
['acyl carrier protein phosphodiesterase    EAE_01360', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?v WHERE { resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 property:found_in_taxon ?v . ?v rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24128110
P702
Q863908
USER
Which gene encodes acyl carrier protein phosphodiesterase    EAE_01360 ?
(Q24128110,P702,c(Q863908))
action filter_type
action find
entity Q24128110
relation P702
type Q863908
['Q24128110', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q24128110 property:P702 ?n . ?n rdf:type ontology:Q863908 }
acyl carrier protein phosphodiesterase    EAE_01360
action filter_type
action find
entity acyl carrier protein phosphodiesterase    EAE_01360
relation encoded by
type nucleic acid sequence
['acyl carrier protein phosphodiesterase    EAE_01360', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 property:encoded_by ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23075938
SYSTEM
acyl carrier protein phosphodiesterase    EAE_01360
Q23075938
(Q24128110,P702,c(Q863908))
action filter_type
action find
entity Q24128110
relation P702
type Q863908
Acyl carrier protein phosphodiesterase EAE 01360 encodes acyl carrier protein phosphodiesterase EAE_01360
['Q24128110', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q24128110 property:P702 ?n . ?n rdf:type ontology:Q863908 }
acyl carrier protein phosphodiesterase    EAE_01360
Acyl carrier protein phosphodiesterase EAE 01360 encodes acyl carrier protein phosphodiesterase EAE_01360
acyl carrier protein phosphodiesterase    EAE_01360
action filter_type
action find
entity acyl carrier protein phosphodiesterase    EAE_01360
relation encoded by
type nucleic acid sequence
['acyl carrier protein phosphodiesterase    EAE_01360', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 property:encoded_by ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q23075938 Q24128110
P688
Q181394
USER
Does acyl carrier protein phosphodiesterase    EAE_01360 encode acyl carrier protein phosphodiesterase    EAE_01360 ?
(Q23075938,P688,Q24128110)
action is_in
entity Q24128110
action find
entity Q23075938
relation P688
['Q23075938', 'P688', 'Q24128110']
ASK WHERE { resource:Q23075938 property:P688 resource:Q24128110 }
acyl carrier protein phosphodiesterase    EAE_01360 acyl carrier protein phosphodiesterase    EAE_01360
action is_in
entity acyl carrier protein phosphodiesterase    EAE_01360
action find
entity acyl carrier protein phosphodiesterase    EAE_01360
relation encodes
['acyl carrier protein phosphodiesterase    EAE_01360', 'encodes', 'acyl carrier protein phosphodiesterase    EAE_01360']
ASK WHERE { resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 property:encodes resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 }
[]
nutrient
SYSTEM
YES
(Q23075938,P688,Q24128110)
action is_in
entity Q24128110
action find
entity Q23075938
relation P688
[ANSWER]
['Q23075938', 'P688', 'Q24128110']
ASK WHERE { resource:Q23075938 property:P688 resource:Q24128110 }
Yes
action is_in
entity acyl carrier protein phosphodiesterase    EAE_01360
action find
entity acyl carrier protein phosphodiesterase    EAE_01360
relation encodes
['acyl carrier protein phosphodiesterase    EAE_01360', 'encodes', 'acyl carrier protein phosphodiesterase    EAE_01360']
ASK WHERE { resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 property:encodes resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q24128110 Q23257162
P688
Q863908
USER
How many nucleic acid sequences encode acyl carrier protein phosphodiesterase    EAE_01360 or amidase    Mb2912c ?
(c(Q863908),P688,Q24128110) (c(Q863908),P688,Q23257162)
action count
action union
action filter_type
action find_reverse
entity Q24128110
relation P688
type Q863908
action filter_type
action find_reverse
entity Q23257162
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24128110'] [{'concept': 'Q863908'}, 'P688', 'Q23257162']
SELECT DISTINCT ( COUNT ( ?t ) AS ?b ) WHERE { { ?t property:P688 resource:Q24128110 . ?t rdf:type ontology:Q863908 } UNION { ?t property:P688 resource:Q23257162 . ?t rdf:type ontology:Q863908 } }
acyl carrier protein phosphodiesterase    EAE_01360 amidase    Mb2912c
action count
action union
action filter_type
action find_reverse
entity acyl carrier protein phosphodiesterase    EAE_01360
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity amidase    Mb2912c
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'acyl carrier protein phosphodiesterase    EAE_01360'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'amidase    Mb2912c']
SELECT DISTINCT ( COUNT ( ?t ) AS ?b ) WHERE { { ?t property:encodes resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 . ?t rdf:type ontology:nucleic_acid_sequence } UNION { ?t property:encodes resource:amidase____Mb2912c . ?t rdf:type ontology:nucleic_acid_sequence } }
[]
nucleic acid sequence
SYSTEM
2
Q23075938 Q23257162
(c(Q863908),P688,Q24128110) (c(Q863908),P688,Q23257162)
action count
action union
action filter_type
action find_reverse
entity Q24128110
relation P688
type Q863908
action filter_type
action find_reverse
entity Q23257162
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q24128110'] [{'concept': 'Q863908'}, 'P688', 'Q23257162']
SELECT DISTINCT ( COUNT ( ?t ) AS ?b ) WHERE { { ?t property:P688 resource:Q24128110 . ?t rdf:type ontology:Q863908 } UNION { ?t property:P688 resource:Q23257162 . ?t rdf:type ontology:Q863908 } }
acyl carrier protein phosphodiesterase    EAE_01360 amidase    Mb2912c
2
action count
action union
action filter_type
action find_reverse
entity acyl carrier protein phosphodiesterase    EAE_01360
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity amidase    Mb2912c
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'acyl carrier protein phosphodiesterase    EAE_01360'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'amidase    Mb2912c']
SELECT DISTINCT ( COUNT ( ?t ) AS ?b ) WHERE { { ?t property:encodes resource:acyl_carrier_protein_phosphodiesterase____EAE_01360 . ?t rdf:type ontology:nucleic_acid_sequence } UNION { ?t property:encodes resource:amidase____Mb2912c . ?t rdf:type ontology:nucleic_acid_sequence } }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q22310882
Q181394
USER
And how about transposase    PP_4024?
(Q22310882,P688,c(Q181394))
action filter_type
action find
entity Q22310882
relation P688
type Q181394
['Q22310882', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?j WHERE { resource:Q22310882 property:P688 ?j . ?j rdf:type ontology:Q181394 }
transposase    PP_4024
action filter_type
action find
entity transposase    PP_4024
relation encodes
type nutrient
['transposase    PP_4024', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?j WHERE { resource:transposase____PP_4024 property:encodes ?j . ?j rdf:type ontology:nutrient }
[]
nutrient
Q22314959
SYSTEM
transposase    PP_4024
Q22314959
(Q22310882,P688,c(Q181394))
action filter_type
action find
entity Q22310882
relation P688
type Q181394
[ANSWER]
['Q22310882', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?j WHERE { resource:Q22310882 property:P688 ?j . ?j rdf:type ontology:Q181394 }
transposase    PP_4024
transposase    PP_4024
action filter_type
action find
entity transposase    PP_4024
relation encodes
type nutrient
['transposase    PP_4024', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?j WHERE { resource:transposase____PP_4024 property:encodes ?j . ?j rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q22314959
P702
Q863908
USER
How many nucleic acid sequences encode transposase    PP_4024 ?
(Q22314959,P702,c(Q863908))
action count
action filter_type
action find
entity Q22314959
relation P702
type Q863908
['Q22314959', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?m ) WHERE { resource:Q22314959 property:P702 ?o . ?o rdf:type ontology:Q863908 }
transposase    PP_4024
action count
action filter_type
action find
entity transposase    PP_4024
relation encoded by
type nucleic acid sequence
['transposase    PP_4024', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?m ) WHERE { resource:transposase____PP_4024 property:encoded_by ?o . ?o rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q22310882
(Q22314959,P702,c(Q863908))
action count
action filter_type
action find
entity Q22314959
relation P702
type Q863908
[ANSWER]
['Q22314959', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?m ) WHERE { resource:Q22314959 property:P702 ?o . ?o rdf:type ontology:Q863908 }
transposase    PP_4024
1
action count
action filter_type
action find
entity transposase    PP_4024
relation encoded by
type nucleic acid sequence
['transposase    PP_4024', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?m ) WHERE { resource:transposase____PP_4024 property:encoded_by ?o . ?o rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q1057 Q181394
USER
How many metabolic processes are atleast 1380 nutrients involved in ?
(c(Q181394),P682,c(Q1057))
action count
action atleast
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
value 1380
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) WHERE { { SELECT DISTINCT ?q ( COUNT ( ?h ) AS ?a ) WHERE { ?h property:P682 ?q . ?q rdf:type ontology:Q1057 . ?h rdf:type ontology:Q181394 } GROUP BY ?q } . FILTER ( ?a >= 1380 ) }
action count
action atleast
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
value 1380
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) WHERE { { SELECT DISTINCT ?q ( COUNT ( ?h ) AS ?a ) WHERE { ?h property:biological_process ?q . ?q rdf:type ontology:metabolic_process . ?h rdf:type ontology:nutrient } GROUP BY ?q } . FILTER ( ?a >= 1380 ) }
[]
metabolic process nutrient
SYSTEM
4
Q14863351 Q14762260 Q14349667 Q14349764
(c(Q181394),P682,c(Q1057))
action count
action atleast
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
value 1380
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) WHERE { { SELECT DISTINCT ?q ( COUNT ( ?h ) AS ?a ) WHERE { ?h property:P682 ?q . ?q rdf:type ontology:Q1057 . ?h rdf:type ontology:Q181394 } GROUP BY ?q } . FILTER ( ?a >= 1380 ) }
signal transduction by protein phosphorylation carbohydrate metabolic process lipid metabolic process oxidation-reduction process
4
action count
action atleast
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
value 1380
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) WHERE { { SELECT DISTINCT ?q ( COUNT ( ?h ) AS ?a ) WHERE { ?h property:biological_process ?q . ?q rdf:type ontology:metabolic_process . ?h rdf:type ontology:nutrient } GROUP BY ?q } . FILTER ( ?a >= 1380 ) }
[]