Simple Question (Direct)
Simple Question
Q21123246
P703
Q16521
USER
Which taxon is Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C found in ?
(Q21123246,P703,c(Q16521))
action filter_type
action find
entity Q21123246
relation P703
type Q16521
['Q21123246', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { resource:Q21123246 property:P703 ?i . ?i rdf:type ontology:Q16521 }
Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
action filter_type
action find
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
relation found in taxon
type taxon
["Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C", 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:found_in_taxon ?i . ?i rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21123246,P703,c(Q16521))
action filter_type
action find
entity Q21123246
relation P703
type Q16521
Calcium / calmodulin-dependent 3', 5 '- cyclic nucleotide phosphodiesterase 1C in is found in [ANSWER]
['Q21123246', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { resource:Q21123246 property:P703 ?i . ?i rdf:type ontology:Q16521 }
Homo sapiens
Calcium / calmodulin-dependent 3', 5 '- cyclic nucleotide phosphodiesterase 1C in is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
relation found in taxon
type taxon
["Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C", 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:found_in_taxon ?i . ?i rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21123246
P129
Q79529
USER
Which chemical substance does that nutrient interact with ?
(Q15978631,P129,c(Q79529))
action filter_type
action find
entity Q21123246
relation P129
type Q79529
['Q15978631', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ?n WHERE { resource:Q21123246 property:P129 ?n . ?n rdf:type ontology:Q79529 }
Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
action filter_type
action find
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
relation physically interacts with
type chemical substance
['Homo sapiens', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ?n WHERE { resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:physically_interacts_with ?n . ?n rdf:type ontology:chemical_substance }
[]
chemical substance
Q15634078
SYSTEM
SCH51866
Q15634078
(Q15978631,P129,c(Q79529))
action filter_type
action find
entity Q21123246
relation P129
type Q79529
That nutrient interacts with [ANSWER]
['Q15978631', 'P129', {'concept': 'Q79529'}]
SELECT DISTINCT ?n WHERE { resource:Q21123246 property:P129 ?n . ?n rdf:type ontology:Q79529 }
SCH51866
That nutrient interacts with SCH51866
SCH51866
action filter_type
action find
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
relation physically interacts with
type chemical substance
['Homo sapiens', 'physically interacts with', {'concept': 'chemical substance'}]
SELECT DISTINCT ?n WHERE { resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:physically_interacts_with ?n . ?n rdf:type ontology:chemical_substance }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21123246
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q15634078)
action filter_type
action find_reverse
entity Q21123246
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q15634078']
SELECT DISTINCT ?z WHERE { ?z property:P688 resource:Q21123246 . ?z rdf:type ontology:Q863908 }
Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
action filter_type
action find_reverse
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'SCH51866']
SELECT DISTINCT ?z WHERE { ?z property:encodes resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C . ?z rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18030402
SYSTEM
PDE1C
Q18030402
(c(Q863908),P688,Q15634078)
action filter_type
action find_reverse
entity Q21123246
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q15634078']
SELECT DISTINCT ?z WHERE { ?z property:P688 resource:Q21123246 . ?z rdf:type ontology:Q863908 }
PDE1C
PDE1C encodes that nutrient
PDE1C
action filter_type
action find_reverse
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'SCH51866']
SELECT DISTINCT ?z WHERE { ?z property:encodes resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C . ?z rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q18030402 Q205764
P2293
Q2057971
USER
Does endometriosis have hereditary association with that nucleic acid sequence ?
(Q18030402,P2293,Q205764)
action is_in
entity Q205764
action find
entity Q18030402
relation P2293
['Q18030402', 'P2293', 'Q205764']
ASK WHERE { resource:Q18030402 property:P2293 resource:Q205764 }
PDE1C endometriosis
action is_in
entity endometriosis
action find
entity PDE1C
relation genetic association
['PDE1C', 'genetic association', 'endometriosis']
ASK WHERE { resource:PDE1C property:genetic_association resource:endometriosis }
[]
health problem
SYSTEM
YES
(Q18030402,P2293,Q205764)
action is_in
entity Q205764
action find
entity Q18030402
relation P2293
[ANSWER]
['Q18030402', 'P2293', 'Q205764']
ASK WHERE { resource:Q18030402 property:P2293 resource:Q205764 }
Yes
action is_in
entity endometriosis
action find
entity PDE1C
relation genetic association
['PDE1C', 'genetic association', 'endometriosis']
ASK WHERE { resource:PDE1C property:genetic_association resource:endometriosis }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q21123246 Q18030402 Q23234634
P702
Q863908
USER
Is Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C the gene that is encoded by PDE1C and peptidoglycan lytic protein P45    lmo2505 ?
(Q21123246,P702,Q18030402) (Q21123246,P702,Q23234634)
action is_in
entity Q21123246
action intersection
action find_reverse
entity Q18030402
relation P702
action find_reverse
entity Q23234634
relation P702
['Q21123246', 'P702', 'Q18030402'] ['Q21123246', 'P702', 'Q23234634']
ASK WHERE { resource:Q21123246 property:P702 resource:Q18030402 . resource:Q21123246 property:P702 resource:Q23234634 }
Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C PDE1C peptidoglycan lytic protein P45    lmo2505
action is_in
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
action intersection
action find_reverse
entity PDE1C
relation encoded by
action find_reverse
entity peptidoglycan lytic protein P45    lmo2505
relation encoded by
["Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C", 'encoded by', 'PDE1C'] ["Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C", 'encoded by', 'peptidoglycan lytic protein P45    lmo2505']
ASK WHERE { resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:encoded_by resource:PDE1C . resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:encoded_by resource:peptidoglycan_lytic_protein_P45____lmo2505 }
[]
nucleic acid sequence
SYSTEM
YES and NO respectively
(Q21123246,P702,Q18030402) (Q21123246,P702,Q23234634)
action is_in
entity Q21123246
action intersection
action find_reverse
entity Q18030402
relation P702
action find_reverse
entity Q23234634
relation P702
[ANSWER]
['Q21123246', 'P702', 'Q18030402'] ['Q21123246', 'P702', 'Q23234634']
ASK WHERE { resource:Q21123246 property:P702 resource:Q18030402 . resource:Q21123246 property:P702 resource:Q23234634 }
YES and NO respectively
action is_in
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
action intersection
action find_reverse
entity PDE1C
relation encoded by
action find_reverse
entity peptidoglycan lytic protein P45    lmo2505
relation encoded by
["Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C", 'encoded by', 'PDE1C'] ["Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C", 'encoded by', 'peptidoglycan lytic protein P45    lmo2505']
ASK WHERE { resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:encoded_by resource:PDE1C . resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:encoded_by resource:peptidoglycan_lytic_protein_P45____lmo2505 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P180
Q16521 Q838948 Q2342494
USER
How many taxons are expressed in exactly 6 works of art and collectables ?
(c(Q838948)|c(Q2342494),P180,c(Q16521))
action count
action equal
action union
action find_reverse_tuple_counts
relation P180
type Q16521
type Q838948
action find_reverse_tuple_counts
relation P180
type Q16521
type Q2342494
value 6
[[{'concept': 'Q838948'}, {'concept': 'Q2342494'}], 'P180', {'concept': 'Q16521'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?w ) WHERE { { SELECT DISTINCT ( COUNT ( ?c ) AS ?r ) ?m WHERE { VALUES ( ?v ) { ( ontology:Q838948 ) ( ontology:Q2342494 ) } . ?c rdf:type ?v } GROUP BY ?m } . FILTER ( ?r = 6 ) }
action count
action equal
action union
action find_reverse_tuple_counts
relation depicts
type taxon
type work of art
action find_reverse_tuple_counts
relation depicts
type taxon
type collectable
value 6
[[{'concept': 'work of art'}, {'concept': 'collectable'}], 'depicts', {'concept': 'taxon'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?w ) WHERE { { SELECT DISTINCT ( COUNT ( ?c ) AS ?r ) ?m WHERE { VALUES ( ?v ) { ( ontology:work_of_art ) ( ontology:collectable ) } . ?c rdf:type ?v } GROUP BY ?m } . FILTER ( ?r = 6 ) }
[]
taxon work of art collectable
SYSTEM
2
Q5113 Q23390
(c(Q838948)|c(Q2342494),P180,c(Q16521))
action count
action equal
action union
action find_reverse_tuple_counts
relation P180
type Q16521
type Q838948
action find_reverse_tuple_counts
relation P180
type Q16521
type Q2342494
value 6
[ANSWER]
[[{'concept': 'Q838948'}, {'concept': 'Q2342494'}], 'P180', {'concept': 'Q16521'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?w ) WHERE { { SELECT DISTINCT ( COUNT ( ?c ) AS ?r ) ?m WHERE { VALUES ( ?v ) { ( ontology:Q838948 ) ( ontology:Q2342494 ) } . ?c rdf:type ?v } GROUP BY ?m } . FILTER ( ?r = 6 ) }
bird deer
2
action count
action equal
action union
action find_reverse_tuple_counts
relation depicts
type taxon
type work of art
action find_reverse_tuple_counts
relation depicts
type taxon
type collectable
value 6
[[{'concept': 'work of art'}, {'concept': 'collectable'}], 'depicts', {'concept': 'taxon'}]
SELECT DISTINCT ( COUNT ( ?m ) AS ?w ) WHERE { { SELECT DISTINCT ( COUNT ( ?c ) AS ?r ) ?m WHERE { VALUES ( ?v ) { ( ontology:work_of_art ) ( ontology:collectable ) } . ?c rdf:type ?v } GROUP BY ?m } . FILTER ( ?r = 6 ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21123246
P680
Q44424
USER
Which the chemical bond that represents the molecular function of Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C ?
(Q21123246,P680,c(Q44424))
action filter_type
action find
entity Q21123246
relation P680
type Q44424
['Q21123246', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?o WHERE { resource:Q21123246 property:P680 ?o . ?o rdf:type ontology:Q44424 }
Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
action filter_type
action find
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
relation molecular function
type chemical bond
["Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C", 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?o WHERE { resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:molecular_function ?o . ?o rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380
SYSTEM
metal ion binding
Q13667380
(Q21123246,P680,c(Q44424))
action filter_type
action find
entity Q21123246
relation P680
type Q44424
Represents of [ANSWER]
['Q21123246', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?o WHERE { resource:Q21123246 property:P680 ?o . ?o rdf:type ontology:Q44424 }
metal ion binding
Represents of metal ion binding
metal ion binding
action filter_type
action find
entity Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C
relation molecular function
type chemical bond
["Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C", 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?o WHERE { resource:Calcium/calmodulin-dependent_3',5'-cyclic_nucleotide_phosphodiesterase_1C property:molecular_function ?o . ?o rdf:type ontology:chemical_bond }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P138
Q1190554 Q502895 Q79529
USER
How many chemical substances have around 2 events and people as their toponym ?
(c(Q79529),P138,c(Q1190554)|c(Q502895))
action count
action approx
action union
action find_tuple_counts
relation P138
type Q79529
type Q1190554
action find_tuple_counts
relation P138
type Q79529
type Q502895
value 2
[{'concept': 'Q79529'}, 'P138', [{'concept': 'Q1190554'}, {'concept': 'Q502895'}]]
SELECT DISTINCT ( COUNT ( ?j ) AS ?w ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?o ) AS ?m ) WHERE { VALUES ( ?e ) { ( ontology:Q1190554 ) ( ontology:Q502895 ) } . ?o rdf:type ?e } GROUP BY ?j } . FILTER ( ?m = 2 ) }
action count
action approx
action union
action find_tuple_counts
relation named after
type chemical substance
type event
action find_tuple_counts
relation named after
type chemical substance
type common name
value 2
[{'concept': 'chemical substance'}, 'named after', [{'concept': 'event'}, {'concept': 'common name'}]]
SELECT DISTINCT ( COUNT ( ?j ) AS ?w ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?o ) AS ?m ) WHERE { VALUES ( ?e ) { ( ontology:event ) ( ontology:common_name ) } . ?o rdf:type ?e } GROUP BY ?j } . FILTER ( ?m = 2 ) }
[]
event common name chemical substance
SYSTEM
1
Q1876
(c(Q79529),P138,c(Q1190554)|c(Q502895))
action count
action approx
action union
action find_tuple_counts
relation P138
type Q79529
type Q1190554
action find_tuple_counts
relation P138
type Q79529
type Q502895
value 2
[ANSWER]
[{'concept': 'Q79529'}, 'P138', [{'concept': 'Q1190554'}, {'concept': 'Q502895'}]]
SELECT DISTINCT ( COUNT ( ?j ) AS ?w ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?o ) AS ?m ) WHERE { VALUES ( ?e ) { ( ontology:Q1190554 ) ( ontology:Q502895 ) } . ?o rdf:type ?e } GROUP BY ?j } . FILTER ( ?m = 2 ) }
curium
1
action count
action approx
action union
action find_tuple_counts
relation named after
type chemical substance
type event
action find_tuple_counts
relation named after
type chemical substance
type common name
value 2
[{'concept': 'chemical substance'}, 'named after', [{'concept': 'event'}, {'concept': 'common name'}]]
SELECT DISTINCT ( COUNT ( ?j ) AS ?w ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?o ) AS ?m ) WHERE { VALUES ( ?e ) { ( ontology:event ) ( ontology:common_name ) } . ?o rdf:type ?e } GROUP BY ?j } . FILTER ( ?m = 2 ) }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q105650 Q18030402
P2293 P1995
Q2057971
USER
Which health problems are herditarily associated with PDE1C and have urology as the associated medical speciality ?
AND((c(Q2057971),P2293,Q18030402), (c(Q2057971),P1995,Q105650))
action filter_type
action intersection
action find_reverse
entity Q18030402
relation P2293
action find_reverse
entity Q105650
relation P1995
type Q2057971
{'AND': [[{'concept': 'Q2057971'}, 'P2293', 'Q18030402'], [{'concept': 'Q2057971'}, 'P1995', 'Q105650']]}
SELECT DISTINCT ?a WHERE { ?a property:P2293 resource:Q18030402 . ?a property:P1995 resource:Q105650 . ?a rdf:type ontology:Q2057971 }
urology PDE1C
action filter_type
action intersection
action find_reverse
entity PDE1C
relation genetic association
action find_reverse
entity urology
relation medical specialty
type health problem
{'AND': [[{'concept': 'health problem'}, 'genetic association', 'PDE1C'], [{'concept': 'health problem'}, 'medical specialty', 'urology']]}
SELECT DISTINCT ?a WHERE { ?a property:genetic_association resource:PDE1C . ?a property:medical_specialty resource:urology . ?a rdf:type ontology:health_problem }
[]
health problem
Q205764
SYSTEM
endometriosis
Q205764
AND((c(Q2057971),P2293,Q18030402), (c(Q2057971),P1995,Q105650))
action filter_type
action intersection
action find_reverse
entity Q18030402
relation P2293
action find_reverse
entity Q105650
relation P1995
type Q2057971
[ANSWER] is herditarily associated with PDE1C and have urology as the associated medical speciality
{'AND': [[{'concept': 'Q2057971'}, 'P2293', 'Q18030402'], [{'concept': 'Q2057971'}, 'P1995', 'Q105650']]}
SELECT DISTINCT ?a WHERE { ?a property:P2293 resource:Q18030402 . ?a property:P1995 resource:Q105650 . ?a rdf:type ontology:Q2057971 }
endometriosis
Endometriosis is herditarily associated with PDE1C and have urology as the associated medical speciality
endometriosis
action filter_type
action intersection
action find_reverse
entity PDE1C
relation genetic association
action find_reverse
entity urology
relation medical specialty
type health problem
{'AND': [[{'concept': 'health problem'}, 'genetic association', 'PDE1C'], [{'concept': 'health problem'}, 'medical specialty', 'urology']]}
SELECT DISTINCT ?a WHERE { ?a property:genetic_association resource:PDE1C . ?a property:medical_specialty resource:urology . ?a rdf:type ontology:health_problem }
[]