Simple Question (Direct)
Simple Question
Q23520509
P703
Q631147
USER
Which taxon does NADH dehydrogenase subunit K    BT9727_4975 belong to ?
(Q23520509,P703,c(Q631147))
action filter_type
action find
entity Q23520509
relation P703
type Q631147
['Q23520509', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?w WHERE { resource:Q23520509 property:P703 ?w . ?w rdf:type ontology:Q631147 }
NADH dehydrogenase subunit K    BT9727_4975
action filter_type
action find
entity NADH dehydrogenase subunit K    BT9727_4975
relation found in taxon
type infraspecific name
['NADH dehydrogenase subunit K    BT9727_4975', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?w WHERE { resource:NADH_dehydrogenase_subunit_K____BT9727_4975 property:found_in_taxon ?w . ?w rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102972
SYSTEM
Bacillus thuringiensis serovar konkukian str. 97-27
Q21102972
(Q23520509,P703,c(Q631147))
action filter_type
action find
entity Q23520509
relation P703
type Q631147
NADH dehydrogenase subunit K BT9727_4975 belongs to the [ANSWER]
['Q23520509', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?w WHERE { resource:Q23520509 property:P703 ?w . ?w rdf:type ontology:Q631147 }
Bacillus thuringiensis serovar konkukian str. 97-27
NADH dehydrogenase subunit K BT9727_4975 belongs to the Bacillus thuringiensis serovar konkukian str. 97-27
Bacillus thuringiensis serovar konkukian str. 97-27
action filter_type
action find
entity NADH dehydrogenase subunit K    BT9727_4975
relation found in taxon
type infraspecific name
['NADH dehydrogenase subunit K    BT9727_4975', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?w WHERE { resource:NADH_dehydrogenase_subunit_K____BT9727_4975 property:found_in_taxon ?w . ?w rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23520509
P688
Q863908
USER
Which nucleic acid sequence encodes NADH dehydrogenase subunit K    BT9727_4975 ?
(c(Q863908),P688,Q23520509)
action filter_type
action find_reverse
entity Q23520509
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23520509']
SELECT DISTINCT ?s WHERE { ?s property:P688 resource:Q23520509 . ?s rdf:type ontology:Q863908 }
NADH dehydrogenase subunit K    BT9727_4975
action filter_type
action find_reverse
entity NADH dehydrogenase subunit K    BT9727_4975
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'NADH dehydrogenase subunit K    BT9727_4975']
SELECT DISTINCT ?s WHERE { ?s property:encodes resource:NADH_dehydrogenase_subunit_K____BT9727_4975 . ?s rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23383457
SYSTEM
NADH dehydrogenase subunit K    BT9727_4975
Q23383457
(c(Q863908),P688,Q23520509)
action filter_type
action find_reverse
entity Q23520509
relation P688
type Q863908
NADH dehydrogenase subunit K BT9727 4975 encodes NADH dehydrogenase subunit K BT9727_4975
[{'concept': 'Q863908'}, 'P688', 'Q23520509']
SELECT DISTINCT ?s WHERE { ?s property:P688 resource:Q23520509 . ?s rdf:type ontology:Q863908 }
NADH dehydrogenase subunit K    BT9727_4975
NADH dehydrogenase subunit K BT9727 4975 encodes NADH dehydrogenase subunit K BT9727_4975
NADH dehydrogenase subunit K    BT9727_4975
action filter_type
action find_reverse
entity NADH dehydrogenase subunit K    BT9727_4975
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'NADH dehydrogenase subunit K    BT9727_4975']
SELECT DISTINCT ?s WHERE { ?s property:encodes resource:NADH_dehydrogenase_subunit_K____BT9727_4975 . ?s rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23383457
P702
Q181394
USER
What is the gene that is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q23383457)
action filter_type
action find_reverse
entity Q23383457
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23383457']
SELECT DISTINCT ?j WHERE { ?j property:P702 resource:Q23383457 . ?j rdf:type ontology:Q181394 }
NADH dehydrogenase subunit K    BT9727_4975
action filter_type
action find_reverse
entity NADH dehydrogenase subunit K    BT9727_4975
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'NADH dehydrogenase subunit K    BT9727_4975']
SELECT DISTINCT ?j WHERE { ?j property:encoded_by resource:NADH_dehydrogenase_subunit_K____BT9727_4975 . ?j rdf:type ontology:nutrient }
[]
nutrient
Q23520509
SYSTEM
NADH dehydrogenase subunit K    BT9727_4975
Q23520509
(c(Q181394),P702,Q23383457)
action filter_type
action find_reverse
entity Q23383457
relation P702
type Q181394
The gene that is encoded by that nucleic acid sequence is NADH dehydrogenase subunit K BT9727 4975
[{'concept': 'Q181394'}, 'P702', 'Q23383457']
SELECT DISTINCT ?j WHERE { ?j property:P702 resource:Q23383457 . ?j rdf:type ontology:Q181394 }
NADH dehydrogenase subunit K    BT9727_4975
The gene that is encoded by that nucleic acid sequence is NADH dehydrogenase subunit K BT9727 4975
NADH dehydrogenase subunit K    BT9727_4975
action filter_type
action find_reverse
entity NADH dehydrogenase subunit K    BT9727_4975
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'NADH dehydrogenase subunit K    BT9727_4975']
SELECT DISTINCT ?j WHERE { ?j property:encoded_by resource:NADH_dehydrogenase_subunit_K____BT9727_4975 . ?j rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q2996394 Q181394
USER
How many biological processes are a biological processes that exactly 4 nutrients are involved in ?
(c(Q181394),P682,c(Q2996394))
action count
action equal
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
value 4
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?s ) WHERE { { SELECT DISTINCT ?g ( COUNT ( ?c ) AS ?i ) WHERE { ?c property:P682 ?g . ?g rdf:type ontology:Q2996394 . ?c rdf:type ontology:Q181394 } GROUP BY ?g } . FILTER ( ?i = 4 ) }
action count
action equal
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
value 4
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?s ) WHERE { { SELECT DISTINCT ?g ( COUNT ( ?c ) AS ?i ) WHERE { ?c property:biological_process ?g . ?g rdf:type ontology:biological_process . ?c rdf:type ontology:nutrient } GROUP BY ?g } . FILTER ( ?i = 4 ) }
[]
biological process nutrient
SYSTEM
9
Q22269626 Q21136671 Q14865397 Q14865659 Q21105147 Q21119405 Q21124921 Q14912956 Q24459846
(c(Q181394),P682,c(Q2996394))
action count
action equal
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
value 4
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?s ) WHERE { { SELECT DISTINCT ?g ( COUNT ( ?c ) AS ?i ) WHERE { ?c property:P682 ?g . ?g rdf:type ontology:Q2996394 . ?c rdf:type ontology:Q181394 } GROUP BY ?g } . FILTER ( ?i = 4 ) }
single-organism developmental process female pronucleus assembly T cell selection tolerance induction single organism reproductive process single-organism behavior P granule organization ovarian cumulus expansion intermicrovillar adhesion
9
action count
action equal
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
value 4
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?s ) WHERE { { SELECT DISTINCT ?g ( COUNT ( ?c ) AS ?i ) WHERE { ?c property:biological_process ?g . ?g rdf:type ontology:biological_process . ?c rdf:type ontology:nutrient } GROUP BY ?g } . FILTER ( ?i = 4 ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23520509
P681
Q15989253
USER
Which is the cell component of NADH dehydrogenase subunit K    BT9727_4975 ?
(Q23520509,P681,c(Q15989253))
action filter_type
action find
entity Q23520509
relation P681
type Q15989253
['Q23520509', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?f WHERE { resource:Q23520509 property:P681 ?f . ?f rdf:type ontology:Q15989253 }
NADH dehydrogenase subunit K    BT9727_4975
action filter_type
action find
entity NADH dehydrogenase subunit K    BT9727_4975
relation cell component
type part
['NADH dehydrogenase subunit K    BT9727_4975', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?f WHERE { resource:NADH_dehydrogenase_subunit_K____BT9727_4975 property:cell_component ?f . ?f rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q23520509,P681,c(Q15989253))
action filter_type
action find
entity Q23520509
relation P681
type Q15989253
The [ANSWER] is the cell component of NADH dehydrogenase subunit K BT9727_4975
['Q23520509', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?f WHERE { resource:Q23520509 property:P681 ?f . ?f rdf:type ontology:Q15989253 }
membrane
The membrane is the cell component of NADH dehydrogenase subunit K BT9727_4975
membrane
action filter_type
action find
entity NADH dehydrogenase subunit K    BT9727_4975
relation cell component
type part
['NADH dehydrogenase subunit K    BT9727_4975', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?f WHERE { resource:NADH_dehydrogenase_subunit_K____BT9727_4975 property:cell_component ?f . ?f rdf:type ontology:part }
[]
Simple Question (Ellipsis)
Incomplete|object parent is changed, subject and predicate remain same
Q23520509
Q5058355
USER
And which cellular component?
(Q23520509,P681,c(Q5058355))
action filter_type
action find
entity Q23520509
relation P681
type Q5058355
['Q23520509', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { resource:Q23520509 property:P681 ?c . ?c rdf:type ontology:Q5058355 }
NADH dehydrogenase subunit K    BT9727_4975
action filter_type
action find
entity NADH dehydrogenase subunit K    BT9727_4975
relation cell component
type cellular component
['NADH dehydrogenase subunit K    BT9727_4975', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { resource:NADH_dehydrogenase_subunit_K____BT9727_4975 property:cell_component ?c . ?c rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q23520509,P681,c(Q5058355))
action filter_type
action find
entity Q23520509
relation P681
type Q5058355
[ANSWER]
['Q23520509', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { resource:Q23520509 property:P681 ?c . ?c rdf:type ontology:Q5058355 }
plasma membrane
plasma membrane
action filter_type
action find
entity NADH dehydrogenase subunit K    BT9727_4975
relation cell component
type cellular component
['NADH dehydrogenase subunit K    BT9727_4975', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { resource:NADH_dehydrogenase_subunit_K____BT9727_4975 property:cell_component ?c . ?c rdf:type ontology:cellular_component }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P361
Q15989253 Q234460 Q15989253
USER
Which parts are atleast 4 texts or parts a component of ?
(c(Q234460)|c(Q15989253),P361,c(Q15989253))
action atleast
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q234460
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q15989253
value 4
[[{'concept': 'Q234460'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?u ) AS ?s ) WHERE { { ?u property:P361 ?y . ?y rdf:type ontology:Q15989253 . ?u rdf:type ontology:Q234460 } UNION { ?u property:P361 ?y . ?y rdf:type ontology:Q15989253 . ?u rdf:type ontology:Q15989253 } } GROUP BY ?y } . FILTER ( ?s >= 4 ) }
action atleast
action union
action find_reverse_tuple_counts
relation part of
type part
type text
action find_reverse_tuple_counts
relation part of
type part
type part
value 4
[[{'concept': 'text'}, {'concept': 'part'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?u ) AS ?s ) WHERE { { ?u property:part_of ?y . ?y rdf:type ontology:part . ?u rdf:type ontology:text } UNION { ?u property:part_of ?y . ?y rdf:type ontology:part . ?u rdf:type ontology:part } } GROUP BY ?y } . FILTER ( ?s >= 4 ) }
[]
part text part
Q24769952 Q24772708 Q24774274
SYSTEM
NAD(P)-binding domain, ABC transporter-like, Winged helix-turn-helix DNA-binding domain
Q24774274 Q24777276 Q24771060 Q24720263 Q24773317 Q24773030 Q24725230 Q24727168 Q24727158 Q24775380 Q24741257 Q24724841 Q24780424 Q24787648 Q24772226 Q24780081 Q24777173 Q24721427 Q24784804 Q24773139 Q24769639 Q24772708 Q24780318 Q24772015 Q24723016 Q24741081 Q24725799 Q24783329 Q24739502 Q24739373 Q13486671 Q24723028 Q24769952 Q24773027 Q24742069 Q24783253 Q24777474 Q24724480 Q24769753 Q24788276 Q24720586 Q24777282
(c(Q234460)|c(Q15989253),P361,c(Q15989253))
action atleast
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q234460
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q15989253
value 4
[ANSWERS] are atleast 4 texts or parts a component of
[[{'concept': 'Q234460'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?u ) AS ?s ) WHERE { { ?u property:P361 ?y . ?y rdf:type ontology:Q15989253 . ?u rdf:type ontology:Q234460 } UNION { ?u property:P361 ?y . ?y rdf:type ontology:Q15989253 . ?u rdf:type ontology:Q15989253 } } GROUP BY ?y } . FILTER ( ?s >= 4 ) }
Winged helix-turn-helix DNA-binding domain Cyclin-like Acyl-CoA N-acyltransferase Thiolase-like Polycystin cation channel L-Aspartase-like Pseudouridine synthase, catalytic domain Ubiquinol-cytochrome c reductase, iron-sulphur subunit Xanthine dehydrogenase, small subunit Pullulanase, type I Alanyl-tRNA synthetase, class IIc, core domain DNA ligase D Armadillo-type fold Immunoglobulin-like fold DNA topoisomerase, type IIA-like domain Immunoglobulin E-set Transcription termination factor NusA Biotin carboxylation domain WD40/YVTN repeat-like-containing domain Rossmann-like alpha/beta/alpha sandwich fold Homeodomain-like ABC transporter-like Pullulanase, extracellular Cupredoxin Pectin lyase fold/virulence factor Lipid transport protein, beta-sheet shell Group II dsDNA virus coat/capsid protein DNA topoisomerase, type IA, central Armadillo-like helical RNA polymerase sigma-70 like domain turtle shell FERM domain NAD(P)-binding domain Nucleic acid-binding, OB-fold EF-hand domain pair Immunoglobulin-like domain RmlC-like jelly roll fold RNA polymerase sigma-70 DNA topoisomerase I, eukaryotic-type Phosphoribosylaminoimidazole carboxylase, ATPase subunit Ribonuclease H-like domain RNA polymerase sigma factor RpoD, C-terminal
NAD(P)-binding domain, ABC transporter-like and Winged helix-turn-helix DNA-binding domain are atleast 4 texts or parts a component of
NAD(P)-binding domain ABC transporter-like Winged helix-turn-helix DNA-binding domain
action atleast
action union
action find_reverse_tuple_counts
relation part of
type part
type text
action find_reverse_tuple_counts
relation part of
type part
type part
value 4
[[{'concept': 'text'}, {'concept': 'part'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ?y WHERE { { SELECT DISTINCT ?y ( COUNT ( ?u ) AS ?s ) WHERE { { ?u property:part_of ?y . ?y rdf:type ontology:part . ?u rdf:type ontology:text } UNION { ?u property:part_of ?y . ?y rdf:type ontology:part . ?u rdf:type ontology:part } } GROUP BY ?y } . FILTER ( ?s >= 4 ) }
[]
Clarification
Quantitative|Count|Logical operators|Indirect
P361
Q62536 Q16889133
USER
How many Ion channels and classes are that part a component of ?
(Q24772708,P361,c(Q62536)) (Q24772708,P361,c(Q16889133)) (Q24769952,P361,c(Q62536)) (Q24769952,P361,c(Q16889133)) (Q24772708,P361,c(Q62536)) (Q24772708,P361,c(Q16889133)) (Q24774274,P361,c(Q62536)) (Q24774274,P361,c(Q16889133))
['Q24772708', 'P361', {'concept': 'Q62536'}] ['Q24772708', 'P361', {'concept': 'Q16889133'}] ['Q24769952', 'P361', {'concept': 'Q62536'}] ['Q24769952', 'P361', {'concept': 'Q16889133'}] ['Q24772708', 'P361', {'concept': 'Q62536'}] ['Q24772708', 'P361', {'concept': 'Q16889133'}] ['Q24774274', 'P361', {'concept': 'Q62536'}] ['Q24774274', 'P361', {'concept': 'Q16889133'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { resource:Q24772708 property:P361 ?z } UNION { resource:Q24772708 property:P361 ?y } UNION { resource:Q24769952 property:P361 ?z } UNION { resource:Q24769952 property:P361 ?y } UNION { resource:Q24772708 property:P361 ?z } UNION { resource:Q24772708 property:P361 ?y } UNION { resource:Q24774274 property:P361 ?z } UNION { resource:Q24774274 property:P361 ?y } } . ?z rdf:type ontology:Q62536 . ?y rdf:type ontology:Q16889133 }
['ABC transporter-like', 'part of', {'concept': 'Ion channel'}] ['ABC transporter-like', 'part of', {'concept': 'class'}] ['NAD(P)-binding domain', 'part of', {'concept': 'Ion channel'}] ['NAD(P)-binding domain', 'part of', {'concept': 'class'}] ['ABC transporter-like', 'part of', {'concept': 'Ion channel'}] ['ABC transporter-like', 'part of', {'concept': 'class'}] ['Winged helix-turn-helix DNA-binding domain', 'part of', {'concept': 'Ion channel'}] ['Winged helix-turn-helix DNA-binding domain', 'part of', {'concept': 'class'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { resource:ABC_transporter-like property:part_of ?z } UNION { resource:ABC_transporter-like property:part_of ?y } UNION { resource:NAD(P)-binding_domain property:part_of ?z } UNION { resource:NAD(P)-binding_domain property:part_of ?y } UNION { resource:ABC_transporter-like property:part_of ?z } UNION { resource:ABC_transporter-like property:part_of ?y } UNION { resource:Winged_helix-turn-helix_DNA-binding_domain property:part_of ?z } UNION { resource:Winged_helix-turn-helix_DNA-binding_domain property:part_of ?y } } . ?z rdf:type ontology:Ion_channel . ?y rdf:type ontology:class }
[]
Ion channel class
Quantitative|Count|Mult. entity type|Clarification
Q24769952
SYSTEM
Did you mean NAD(P)-binding domain ?
[ANSWER]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { resource:Q24772708 property:P361 ?z } UNION { resource:Q24772708 property:P361 ?y } UNION { resource:Q24769952 property:P361 ?z } UNION { resource:Q24769952 property:P361 ?y } UNION { resource:Q24772708 property:P361 ?z } UNION { resource:Q24772708 property:P361 ?y } UNION { resource:Q24774274 property:P361 ?z } UNION { resource:Q24774274 property:P361 ?y } } . ?z rdf:type ontology:Q62536 . ?y rdf:type ontology:Q16889133 }
Did you mean NAD(P)-binding domain ?
NAD(P)-binding domain
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { resource:ABC_transporter-like property:part_of ?z } UNION { resource:ABC_transporter-like property:part_of ?y } UNION { resource:NAD(P)-binding_domain property:part_of ?z } UNION { resource:NAD(P)-binding_domain property:part_of ?y } UNION { resource:ABC_transporter-like property:part_of ?z } UNION { resource:ABC_transporter-like property:part_of ?y } UNION { resource:Winged_helix-turn-helix_DNA-binding_domain property:part_of ?z } UNION { resource:Winged_helix-turn-helix_DNA-binding_domain property:part_of ?y } } . ?z rdf:type ontology:Ion_channel . ?y rdf:type ontology:class }
[]
Quantitative Reasoning (Count) (All)
USER
No, I meant ABC transporter-like. Could you tell me the answer for that?
(Q24772708,P361,c(Q62536)) (Q24772708,P361,c(Q16889133)) (Q24769952,P361,c(Q62536)) (Q24769952,P361,c(Q16889133)) (Q24772708,P361,c(Q62536)) (Q24772708,P361,c(Q16889133)) (Q24774274,P361,c(Q62536)) (Q24774274,P361,c(Q16889133))
Q24772708
['Q24772708', 'P361', {'concept': 'Q62536'}] ['Q24772708', 'P361', {'concept': 'Q16889133'}] ['Q24769952', 'P361', {'concept': 'Q62536'}] ['Q24769952', 'P361', {'concept': 'Q16889133'}] ['Q24772708', 'P361', {'concept': 'Q62536'}] ['Q24772708', 'P361', {'concept': 'Q16889133'}] ['Q24774274', 'P361', {'concept': 'Q62536'}] ['Q24774274', 'P361', {'concept': 'Q16889133'}]
['ABC transporter-like', 'part of', {'concept': 'Ion channel'}] ['ABC transporter-like', 'part of', {'concept': 'class'}] ['NAD(P)-binding domain', 'part of', {'concept': 'Ion channel'}] ['NAD(P)-binding domain', 'part of', {'concept': 'class'}] ['ABC transporter-like', 'part of', {'concept': 'Ion channel'}] ['ABC transporter-like', 'part of', {'concept': 'class'}] ['Winged helix-turn-helix DNA-binding domain', 'part of', {'concept': 'Ion channel'}] ['Winged helix-turn-helix DNA-binding domain', 'part of', {'concept': 'class'}]
[]
SYSTEM
1 Ion channels and 62 classes
Q24723296 Q24786504 Q24724985 Q24724146 Q24768037 Q24784622 Q24777771 Q24727375 Q24738485 Q24740103 Q24781380 Q24772783 Q24772049 Q24720896 Q24777139 Q24782270 Q24719914 Q24719772 Q24773078 Q24771730 Q24780371 Q24771245 Q24778969 Q24786222 Q24774742 Q24722187 Q24723416 Q24768061 Q24783869 Q24776035 Q24723905 Q24775594 Q24770595 Q24778621 Q24775855 Q24769828 Q24770181 Q24780031 Q24784378 Q24782707 Q24775530 Q24774344 Q24726283 Q24776725 Q24784743 Q24784886 Q24721549 Q24745449 Q24779257 Q24785832 Q24740199 Q24725968 Q24772295 Q24777145 Q24787778 Q24746072 Q24775229 Q24780580 Q24786463 Q24771747 Q24773897 Q24769413 Q24739086
(Q24772708,P361,c(Q62536)) (Q24772708,P361,c(Q16889133)) (Q24769952,P361,c(Q62536)) (Q24769952,P361,c(Q16889133)) (Q24772708,P361,c(Q62536)) (Q24772708,P361,c(Q16889133)) (Q24774274,P361,c(Q62536)) (Q24774274,P361,c(Q16889133))
[ANSWER]
['Q24772708', 'P361', {'concept': 'Q62536'}] ['Q24772708', 'P361', {'concept': 'Q16889133'}] ['Q24769952', 'P361', {'concept': 'Q62536'}] ['Q24769952', 'P361', {'concept': 'Q16889133'}] ['Q24772708', 'P361', {'concept': 'Q62536'}] ['Q24772708', 'P361', {'concept': 'Q16889133'}] ['Q24774274', 'P361', {'concept': 'Q62536'}] ['Q24774274', 'P361', {'concept': 'Q16889133'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { resource:Q24772708 property:P361 ?z } UNION { resource:Q24772708 property:P361 ?y } UNION { resource:Q24769952 property:P361 ?z } UNION { resource:Q24769952 property:P361 ?y } UNION { resource:Q24772708 property:P361 ?z } UNION { resource:Q24772708 property:P361 ?y } UNION { resource:Q24774274 property:P361 ?z } UNION { resource:Q24774274 property:P361 ?y } } . ?z rdf:type ontology:Q62536 . ?y rdf:type ontology:Q16889133 }
Phosphonate C-P lyase system, PhnL ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria Cyclic peptide transporter ATPase, type I secretion system ABC transporter, haem export, CcmA Nickel import ATP-binding protein NikD Zinc import ATP-binding protein ZnuC Pleiotropic drug resistance protein PDR/CDR Thiamine ABC transporter, ATP-binding protein ThiQ Molybdate ABC transporter, ATP-binding protein ABC transporter, D-xylose, ATP-binding protein Nickel import ATP-binding protein NikE Lipoprotein releasing system, ATP-binding protein ATPase, type I secretion system, PrtD Cell division protein  FtsE, ATP-binding Cobalt transport protein ATP-binding subunit LytTR transcriptional regulator with ABC transporter ATP-binding domain Retinal-specific ATP-binding cassette transporter Peptidase C39, ABC-type bacteriocin transporter Nodulation ABC transporter, NodI ATP-binding cassette subfamily C member 9 Antigen peptide transporter 1 Phosphonate C-P lyase system, PhnK 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 ATP-binding cassette subfamily C member 8 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD ABC transporter, ATP-binding/permease protein ABC transporter, spermidine/putrescine import ATP-binding protein, PotA FeS cluster assembly SUF system, ATPase SufC ABC transporter, ATP-binding protein, ChvD Peroxysomal long chain fatty acyl transporter NHPM bacteriocin system ABC transporter, ATP-binding protein Spermidine/putrescine ABC transporter, ATP-binding subunit Nitrate transport ATP-binding subunit C/D ABC transporter ABCE ABC transporter, phosphonate import, PhnC Daunorubicin resistance ABC transporter ATP-binding subunit DrrA ABC transporter, urea, ATP-binding protein, UrtD UvrABC system subunit A ABC transporter ATP-binding subunit, DevA type Sulphonylurea receptor Glucan exporter ATP-binding protein, NdvA ABC transporter, lipid A export, MsbA ABC transporter, G1 ABC transporter, ribose import, RbsA sn-Glycerol-3-phosphate import ATP-binding protein UgpC ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC Cystic fibrosis transmembrane conductance regulator Aliphatic sulfonates import ATP-binding protein SsuB Methyl coenzyme M reductase system, component A2 Glycine betaine transport ATP-binding subunit Elongation Factor 3 Multi drug resistance-associated protein ABC transporter, urea, ATP-binding protein, UrtE ABC transporter, hemin import, HmuV 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein ABC transporter Tap-like Pigment precursor permease Antigen peptide transporter 2 Phosphate transport system permease protein 1 ABC transporter, galactose import, MglA Ectoine/hydroxyectoine ABC transporter, ATP-binding protein
1 Ion channels and 62 classes
['ABC transporter-like', 'part of', {'concept': 'Ion channel'}] ['ABC transporter-like', 'part of', {'concept': 'class'}] ['NAD(P)-binding domain', 'part of', {'concept': 'Ion channel'}] ['NAD(P)-binding domain', 'part of', {'concept': 'class'}] ['ABC transporter-like', 'part of', {'concept': 'Ion channel'}] ['ABC transporter-like', 'part of', {'concept': 'class'}] ['Winged helix-turn-helix DNA-binding domain', 'part of', {'concept': 'Ion channel'}] ['Winged helix-turn-helix DNA-binding domain', 'part of', {'concept': 'class'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { resource:ABC_transporter-like property:part_of ?z } UNION { resource:ABC_transporter-like property:part_of ?y } UNION { resource:NAD(P)-binding_domain property:part_of ?z } UNION { resource:NAD(P)-binding_domain property:part_of ?y } UNION { resource:ABC_transporter-like property:part_of ?z } UNION { resource:ABC_transporter-like property:part_of ?y } UNION { resource:Winged_helix-turn-helix_DNA-binding_domain property:part_of ?z } UNION { resource:Winged_helix-turn-helix_DNA-binding_domain property:part_of ?y } } . ?z rdf:type ontology:Ion_channel . ?y rdf:type ontology:class }
[]
Simple Question (Ellipsis)
Incomplete|object parent is changed, subject and predicate remain same
Q24772708
Q15989253
USER
And which part?
(Q24772708,P361,c(Q15989253))
action filter_type
action find
entity Q24772708
relation P361
type Q15989253
['Q24772708', 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { resource:Q24772708 property:P361 ?h . ?h rdf:type ontology:Q15989253 }
ABC transporter-like
action filter_type
action find
entity ABC transporter-like
relation part of
type part
['ABC transporter-like', 'part of', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { resource:ABC_transporter-like property:part_of ?h . ?h rdf:type ontology:part }
[]
part
Q24779372 Q24769097 Q24723616
SYSTEM
ABC transporter, NodI, Sulphate transport system permease protein 1, ABC transporter, macrolide export, ATP-binding domain
Q24769097 Q24723616 Q24725706 Q24779372
(Q24772708,P361,c(Q15989253))
action filter_type
action find
entity Q24772708
relation P361
type Q15989253
[ANSWERS]
['Q24772708', 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?h WHERE { resource:Q24772708 property:P361 ?h . ?h rdf:type ontology:Q15989253 }
Sulphate transport system permease protein 1 ABC transporter, macrolide export, ATP-binding domain ATPase, type I secretion system, HlyB ABC transporter, NodI
ABC transporter, NodI Sulphate transport system permease protein 1 ABC transporter, macrolide export, ATP-binding domain
action filter_type
action find
entity ABC transporter-like
relation part of
type part
['ABC transporter-like', 'part of', {'concept': 'part'}]
SELECT DISTINCT ?h WHERE { resource:ABC_transporter-like property:part_of ?h . ?h rdf:type ontology:part }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q24772708
P361
Q15989253
USER
Are ABC transporter-like a component of those ones ?
(Q24772708,P361,Q24779372) (Q24772708,P361,Q24769097) (Q24772708,P361,Q24723616)
action is_in
entity prev_answer
action find
entity Q24772708
relation P361
['Q24772708', 'P361', 'Q24779372'] ['Q24772708', 'P361', 'Q24769097'] ['Q24772708', 'P361', 'Q24723616']
ASK WHERE { resource:Q24772708 property:P361 ?r . VALUES ( ?r ) { ( resource:Q24769097 ) ( resource:Q24723616 ) ( resource:Q24725706 ) } }
ABC transporter-like
action is_in
entity prev_answer
action find
entity ABC transporter-like
relation part of
['ABC transporter-like', 'part of', 'ABC transporter, NodI'] ['ABC transporter-like', 'part of', 'Sulphate transport system permease protein 1'] ['ABC transporter-like', 'part of', 'ABC transporter, macrolide export, ATP-binding domain']
ASK WHERE { resource:ABC_transporter-like property:part_of ?r . VALUES ( ?r ) { ( resource:Sulphate_transport_system_permease_protein_1 ) ( resource:ABC_transporter,_macrolide_export,_ATP-binding_domain ) ( resource:ATPase,_type_I_secretion_system,_HlyB ) } }
[]
part
SYSTEM
YES
(Q24772708,P361,Q24779372) (Q24772708,P361,Q24769097) (Q24772708,P361,Q24723616)
action is_in
entity prev_answer
action find
entity Q24772708
relation P361
[ANSWER]
['Q24772708', 'P361', 'Q24779372'] ['Q24772708', 'P361', 'Q24769097'] ['Q24772708', 'P361', 'Q24723616']
ASK WHERE { resource:Q24772708 property:P361 ?r . VALUES ( ?r ) { ( resource:Q24769097 ) ( resource:Q24723616 ) ( resource:Q24725706 ) } }
Yes
action is_in
entity prev_answer
action find
entity ABC transporter-like
relation part of
['ABC transporter-like', 'part of', 'ABC transporter, NodI'] ['ABC transporter-like', 'part of', 'Sulphate transport system permease protein 1'] ['ABC transporter-like', 'part of', 'ABC transporter, macrolide export, ATP-binding domain']
ASK WHERE { resource:ABC_transporter-like property:part_of ?r . VALUES ( ?r ) { ( resource:Sulphate_transport_system_permease_protein_1 ) ( resource:ABC_transporter,_macrolide_export,_ATP-binding_domain ) ( resource:ATPase,_type_I_secretion_system,_HlyB ) } }
[]