Simple Question (Direct)
Simple Question
Q27550059
P702
Q863908
USER
What is the gene that encodes Azf1p YOR113W ?
(Q27550059,P702,c(Q863908))
action filter_type
action find
entity Q27550059
relation P702
type Q863908
['Q27550059', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q863908 . resource:Q27550059 property:P702 ?x }
Azf1p YOR113W
action filter_type
action find
entity Azf1p YOR113W
relation encoded by
type nucleic acid sequence
['Azf1p YOR113W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:nucleic_acid_sequence . resource:Azf1p_YOR113W property:encoded_by ?x }
[]
nucleic acid sequence
Q27542970
SYSTEM
Azf1p YOR113W
Q27542970
(Q27550059,P702,c(Q863908))
action filter_type
action find
entity Q27550059
relation P702
type Q863908
The gene that encodes Azf 1p YOR 113 W is also [ANSWER]
['Q27550059', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q863908 . resource:Q27550059 property:P702 ?x }
Azf1p YOR113W
The gene that encodes Azf 1p YOR 113 W is also Azf1p YOR113W
Azf1p YOR113W
action filter_type
action find
entity Azf1p YOR113W
relation encoded by
type nucleic acid sequence
['Azf1p YOR113W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:nucleic_acid_sequence . resource:Azf1p_YOR113W property:encoded_by ?x }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q27542970 Q27550059
P688
Q181394
USER
Is Azf1p YOR113W an encoding of Azf1p YOR113W ?
(Q27542970,P688,Q27550059)
action is_in
entity Q27550059
action find
entity Q27542970
relation P688
['Q27542970', 'P688', 'Q27550059']
ASK WHERE { resource:Q27542970 property:P688 resource:Q27550059 }
Azf1p YOR113W Azf1p YOR113W
action is_in
entity Azf1p YOR113W
action find
entity Azf1p YOR113W
relation encodes
['Azf1p YOR113W', 'encodes', 'Azf1p YOR113W']
ASK WHERE { resource:Azf1p_YOR113W property:encodes resource:Azf1p_YOR113W }
[]
nutrient
SYSTEM
YES
(Q27542970,P688,Q27550059)
action is_in
entity Q27550059
action find
entity Q27542970
relation P688
[ANSWER]
['Q27542970', 'P688', 'Q27550059']
ASK WHERE { resource:Q27542970 property:P688 resource:Q27550059 }
Yes
action is_in
entity Azf1p YOR113W
action find
entity Azf1p YOR113W
relation encodes
['Azf1p YOR113W', 'encodes', 'Azf1p YOR113W']
ASK WHERE { resource:Azf1p_YOR113W property:encodes resource:Azf1p_YOR113W }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q79529 Q8386
USER
How many nutrients do around 80 chemical substances and drugs collaborate with ?
(c(Q79529)|c(Q8386),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 80
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?h ) WHERE { FILTER ( ?v = 80 ) . { SELECT DISTINCT ( COUNT ( ?s ) AS ?v ) ?d WHERE { { ?d rdf:type ontology:Q181394 . ?s rdf:type ontology:Q79529 . ?s property:P129 ?d } UNION { ?s property:P129 ?d . ?s rdf:type ontology:Q8386 . ?d rdf:type ontology:Q181394 } } GROUP BY ?d } }
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 80
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?h ) WHERE { FILTER ( ?v = 80 ) . { SELECT DISTINCT ( COUNT ( ?s ) AS ?v ) ?d WHERE { { ?d rdf:type ontology:nutrient . ?s rdf:type ontology:chemical_substance . ?s property:physically_interacts_with ?d } UNION { ?s property:physically_interacts_with ?d . ?s rdf:type ontology:drug . ?d rdf:type ontology:nutrient } } GROUP BY ?d } }
[]
nutrient chemical substance drug
SYSTEM
2
Q21108118 Q21115043
(c(Q79529)|c(Q8386),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 80
[ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?h ) WHERE { FILTER ( ?v = 80 ) . { SELECT DISTINCT ( COUNT ( ?s ) AS ?v ) ?d WHERE { { ?d rdf:type ontology:Q181394 . ?s rdf:type ontology:Q79529 . ?s property:P129 ?d } UNION { ?s property:P129 ?d . ?s rdf:type ontology:Q8386 . ?d rdf:type ontology:Q181394 } } GROUP BY ?d } }
5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1A
2
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 80
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?h ) WHERE { FILTER ( ?v = 80 ) . { SELECT DISTINCT ( COUNT ( ?s ) AS ?v ) ?d WHERE { { ?d rdf:type ontology:nutrient . ?s rdf:type ontology:chemical_substance . ?s property:physically_interacts_with ?d } UNION { ?s property:physically_interacts_with ?d . ?s rdf:type ontology:drug . ?d rdf:type ontology:nutrient } } GROUP BY ?d } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27542970
P703
Q631147
USER
Which taxon does Azf1p YOR113W belong to ?
(Q27542970,P703,c(Q631147))
action filter_type
action find
entity Q27542970
relation P703
type Q631147
['Q27542970', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?t WHERE { resource:Q27542970 property:P703 ?t . ?t rdf:type ontology:Q631147 }
Azf1p YOR113W
action filter_type
action find
entity Azf1p YOR113W
relation found in taxon
type infraspecific name
['Azf1p YOR113W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?t WHERE { resource:Azf1p_YOR113W property:found_in_taxon ?t . ?t rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27542970,P703,c(Q631147))
action filter_type
action find
entity Q27542970
relation P703
type Q631147
Azf 1p YOR 113 W belongs to [ANSWER]
['Q27542970', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?t WHERE { resource:Q27542970 property:P703 ?t . ?t rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
Azf 1p YOR 113 W belongs to Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
action filter_type
action find
entity Azf1p YOR113W
relation found in taxon
type infraspecific name
['Azf1p YOR113W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?t WHERE { resource:Azf1p_YOR113W property:found_in_taxon ?t . ?t rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q21136837 Q27550059
P680
Q44424
USER
Which chemical bonds represents the molecular function of Azf1p YOR113W and Zinc fingers and homeoboxes protein 2 ?
AND((Q27550059,P680,c(Q44424)), (Q21136837,P680,c(Q44424)))
action filter_type
action intersection
action find
entity Q27550059
relation P680
action find
entity Q21136837
relation P680
type Q44424
{'AND': [['Q27550059', 'P680', {'concept': 'Q44424'}], ['Q21136837', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?b WHERE { resource:Q27550059 property:P680 ?b . resource:Q21136837 property:P680 ?b . ?b rdf:type ontology:Q44424 }
Zinc fingers and homeoboxes protein 2 Azf1p YOR113W
action filter_type
action intersection
action find
entity Azf1p YOR113W
relation molecular function
action find
entity Zinc fingers and homeoboxes protein 2
relation molecular function
type chemical bond
{'AND': [['Azf1p YOR113W', 'molecular function', {'concept': 'chemical bond'}], ['Zinc fingers and homeoboxes protein 2', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?b WHERE { resource:Azf1p_YOR113W property:molecular_function ?b . resource:Zinc_fingers_and_homeoboxes_protein_2 property:molecular_function ?b . ?b rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380
SYSTEM
metal ion binding
Q13667380
AND((Q27550059,P680,c(Q44424)), (Q21136837,P680,c(Q44424)))
action filter_type
action intersection
action find
entity Q27550059
relation P680
action find
entity Q21136837
relation P680
type Q44424
The [ANSWER] represents the molecular function of Azf1p YOR113W and Zinc fingers and homeoboxes protein 2
{'AND': [['Q27550059', 'P680', {'concept': 'Q44424'}], ['Q21136837', 'P680', {'concept': 'Q44424'}]]}
SELECT DISTINCT ?b WHERE { resource:Q27550059 property:P680 ?b . resource:Q21136837 property:P680 ?b . ?b rdf:type ontology:Q44424 }
metal ion binding
The metal ion binding represents the molecular function of Azf1p YOR113W and Zinc fingers and homeoboxes protein 2
metal ion binding
action filter_type
action intersection
action find
entity Azf1p YOR113W
relation molecular function
action find
entity Zinc fingers and homeoboxes protein 2
relation molecular function
type chemical bond
{'AND': [['Azf1p YOR113W', 'molecular function', {'concept': 'chemical bond'}], ['Zinc fingers and homeoboxes protein 2', 'molecular function', {'concept': 'chemical bond'}]]}
SELECT DISTINCT ?b WHERE { resource:Azf1p_YOR113W property:molecular_function ?b . resource:Zinc_fingers_and_homeoboxes_protein_2 property:molecular_function ?b . ?b rdf:type ontology:chemical_bond }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q13667380 Q24223282
P680
Q181394
USER
Does dehydrogenase    blr1253 have the molecular function that chemical bond ?
(Q24223282,P680,Q13667380)
action is_in
entity Q24223282
action find
entity Q13667380
relation P680
['Q24223282', 'P680', 'Q13667380']
ASK WHERE { resource:Q13667380 property:P680 resource:Q24223282 }
metal ion binding dehydrogenase    blr1253
action is_in
entity dehydrogenase    blr1253
action find
entity metal ion binding
relation molecular function
['dehydrogenase    blr1253', 'molecular function', 'metal ion binding']
ASK WHERE { resource:metal_ion_binding property:molecular_function resource:dehydrogenase____blr1253 }
[]
nutrient
SYSTEM
NO
(Q24223282,P680,Q13667380)
action is_in
entity Q24223282
action find
entity Q13667380
relation P680
[ANSWER]
['Q24223282', 'P680', 'Q13667380']
ASK WHERE { resource:Q13667380 property:P680 resource:Q24223282 }
No
action is_in
entity dehydrogenase    blr1253
action find
entity metal ion binding
relation molecular function
['dehydrogenase    blr1253', 'molecular function', 'metal ion binding']
ASK WHERE { resource:metal_ion_binding property:molecular_function resource:dehydrogenase____blr1253 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27550059
P681
Q15989253
USER
What is a component of Azf1p YOR113W ?
(Q27550059,P681,c(Q15989253))
action filter_type
action find
entity Q27550059
relation P681
type Q15989253
['Q27550059', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?f WHERE { resource:Q27550059 property:P681 ?f . ?f rdf:type ontology:Q15989253 }
Azf1p YOR113W
action filter_type
action find
entity Azf1p YOR113W
relation cell component
type part
['Azf1p YOR113W', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?f WHERE { resource:Azf1p_YOR113W property:cell_component ?f . ?f rdf:type ontology:part }
[]
part
Q40260
SYSTEM
nucleus
Q40260
(Q27550059,P681,c(Q15989253))
action filter_type
action find
entity Q27550059
relation P681
type Q15989253
A component of Azf 1p YOR 113 W is the [ANSWER]
['Q27550059', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?f WHERE { resource:Q27550059 property:P681 ?f . ?f rdf:type ontology:Q15989253 }
nucleus
A component of Azf 1p YOR 113 W is the nucleus
nucleus
action filter_type
action find
entity Azf1p YOR113W
relation cell component
type part
['Azf1p YOR113W', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?f WHERE { resource:Azf1p_YOR113W property:cell_component ?f . ?f rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21979934
Q15989253
USER
And also tell me about Copine-6?
(Q21979934,P681,c(Q15989253))
action filter_type
action find
entity Q21979934
relation P681
type Q15989253
['Q21979934', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { resource:Q21979934 property:P681 ?n . ?n rdf:type ontology:Q15989253 }
Copine-6
action filter_type
action find
entity Copine-6
relation cell component
type part
['Copine-6', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { resource:Copine-6 property:cell_component ?n . ?n rdf:type ontology:part }
[]
part
Q14349455 Q79899
SYSTEM
membrane, cytoplasm
Q14349455 Q79899
(Q21979934,P681,c(Q15989253))
action filter_type
action find
entity Q21979934
relation P681
type Q15989253
[ANSWERS]
['Q21979934', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { resource:Q21979934 property:P681 ?n . ?n rdf:type ontology:Q15989253 }
membrane cytoplasm
membrane cytoplasm
action filter_type
action find
entity Copine-6
relation cell component
type part
['Copine-6', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { resource:Copine-6 property:cell_component ?n . ?n rdf:type ontology:part }
[]