Simple Question (Direct)
Simple Question
Q21986839
P703
Q16521
USER
Which taxon is Sperm motility kinase Z found in ?
(Q21986839,P703,c(Q16521))
action filter_type
action find
entity Q21986839
relation P703
type Q16521
['Q21986839', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?h WHERE { resource:Q21986839 property:P703 ?h . ?h rdf:type ontology:Q16521 }
Sperm motility kinase Z
action filter_type
action find
entity Sperm motility kinase Z
relation found in taxon
type taxon
['Sperm motility kinase Z', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?h WHERE { resource:Sperm_motility_kinase_Z property:found_in_taxon ?h . ?h rdf:type ontology:taxon }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
(Q21986839,P703,c(Q16521))
action filter_type
action find
entity Q21986839
relation P703
type Q16521
Sperm motility kinase Z is found in [ANSWER]
['Q21986839', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?h WHERE { resource:Q21986839 property:P703 ?h . ?h rdf:type ontology:Q16521 }
Mus musculus
Sperm motility kinase Z is found in Mus musculus
Mus musculus
action filter_type
action find
entity Sperm motility kinase Z
relation found in taxon
type taxon
['Sperm motility kinase Z', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?h WHERE { resource:Sperm_motility_kinase_Z property:found_in_taxon ?h . ?h rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21986839
P702
Q863908
USER
Which gene encodes that nutrient ?
(Q83310,P702,c(Q863908))
action filter_type
action find
entity Q21986839
relation P702
type Q863908
['Q83310', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?p WHERE { resource:Q21986839 property:P702 ?p . ?p rdf:type ontology:Q863908 }
Sperm motility kinase Z
action filter_type
action find
entity Sperm motility kinase Z
relation encoded by
type nucleic acid sequence
['Mus musculus', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?p WHERE { resource:Sperm_motility_kinase_Z property:encoded_by ?p . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18298583
SYSTEM
Gm4922
Q18298583
(Q83310,P702,c(Q863908))
action filter_type
action find
entity Q21986839
relation P702
type Q863908
[ANSWER] encodes that nutrient
['Q83310', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?p WHERE { resource:Q21986839 property:P702 ?p . ?p rdf:type ontology:Q863908 }
Gm4922
Gm4922 encodes that nutrient
Gm4922
action filter_type
action find
entity Sperm motility kinase Z
relation encoded by
type nucleic acid sequence
['Mus musculus', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?p WHERE { resource:Sperm_motility_kinase_Z property:encoded_by ?p . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q18298583 Q23511306
P688
Q181394
USER
Does that nucleic acid sequence encode LytR family transcriptional regulator    BC0801 ?
(Q18298583,P688,Q23511306)
action is_in
entity Q23511306
action find
entity Q18298583
relation P688
['Q18298583', 'P688', 'Q23511306']
ASK WHERE { resource:Q18298583 property:P688 resource:Q23511306 }
Gm4922 LytR family transcriptional regulator    BC0801
action is_in
entity LytR family transcriptional regulator    BC0801
action find
entity Gm4922
relation encodes
['Gm4922', 'encodes', 'LytR family transcriptional regulator    BC0801']
ASK WHERE { resource:Gm4922 property:encodes resource:LytR_family_transcriptional_regulator____BC0801 }
[]
nutrient
SYSTEM
NO
(Q18298583,P688,Q23511306)
action is_in
entity Q23511306
action find
entity Q18298583
relation P688
[ANSWER]
['Q18298583', 'P688', 'Q23511306']
ASK WHERE { resource:Q18298583 property:P688 resource:Q23511306 }
No
action is_in
entity LytR family transcriptional regulator    BC0801
action find
entity Gm4922
relation encodes
['Gm4922', 'encodes', 'LytR family transcriptional regulator    BC0801']
ASK WHERE { resource:Gm4922 property:encodes resource:LytR_family_transcriptional_regulator____BC0801 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q79529 Q181394
USER
How many nutrients do around 40 chemical substances and nutrients collaborate with ?
(c(Q79529)|c(Q181394),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 40
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?s ) WHERE { { SELECT DISTINCT ( COUNT ( ?g ) AS ?h ) ?v WHERE { { ?g property:P129 ?v . ?v rdf:type ontology:Q181394 . ?g rdf:type ontology:Q79529 } UNION { ?v rdf:type ontology:Q181394 . ?g rdf:type ontology:Q181394 . ?g property:P129 ?v } } GROUP BY ?v } . FILTER ( ?h = 40 ) }
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 40
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?s ) WHERE { { SELECT DISTINCT ( COUNT ( ?g ) AS ?h ) ?v WHERE { { ?g property:physically_interacts_with ?v . ?v rdf:type ontology:nutrient . ?g rdf:type ontology:chemical_substance } UNION { ?v rdf:type ontology:nutrient . ?g rdf:type ontology:nutrient . ?g property:physically_interacts_with ?v } } GROUP BY ?v } . FILTER ( ?h = 40 ) }
[]
nutrient chemical substance nutrient
SYSTEM
3
Q4639596 Q21108118 Q21115043
(c(Q79529)|c(Q181394),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 40
[ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?s ) WHERE { { SELECT DISTINCT ( COUNT ( ?g ) AS ?h ) ?v WHERE { { ?g property:P129 ?v . ?v rdf:type ontology:Q181394 . ?g rdf:type ontology:Q79529 } UNION { ?v rdf:type ontology:Q181394 . ?g rdf:type ontology:Q181394 . ?g property:P129 ?v } } GROUP BY ?v } . FILTER ( ?h = 40 ) }
5-hydroxytryptamine receptor 2B 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1A
3
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 40
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?s ) WHERE { { SELECT DISTINCT ( COUNT ( ?g ) AS ?h ) ?v WHERE { { ?g property:physically_interacts_with ?v . ?v rdf:type ontology:nutrient . ?g rdf:type ontology:chemical_substance } UNION { ?v rdf:type ontology:nutrient . ?g rdf:type ontology:nutrient . ?g property:physically_interacts_with ?v } } GROUP BY ?v } . FILTER ( ?h = 40 ) }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q83310 Q21986839
P703 P688
Q863908
USER
Which nucleic acid sequences encodes Sperm motility kinase Z and are found in the taxon Mus musculus ?
AND((c(Q863908),P688,Q21986839), (c(Q863908),P703,Q83310))
action filter_type
action intersection
action find_reverse
entity Q21986839
relation P688
action find_reverse
entity Q83310
relation P703
type Q863908
{'AND': [[{'concept': 'Q863908'}, 'P688', 'Q21986839'], [{'concept': 'Q863908'}, 'P703', 'Q83310']]}
SELECT DISTINCT ?x WHERE { ?x property:P688 resource:Q21986839 . ?x property:P703 resource:Q83310 . ?x rdf:type ontology:Q863908 }
Mus musculus Sperm motility kinase Z
action filter_type
action intersection
action find_reverse
entity Sperm motility kinase Z
relation encodes
action find_reverse
entity Mus musculus
relation found in taxon
type nucleic acid sequence
{'AND': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Sperm motility kinase Z'], [{'concept': 'nucleic acid sequence'}, 'found in taxon', 'Mus musculus']]}
SELECT DISTINCT ?x WHERE { ?x property:encodes resource:Sperm_motility_kinase_Z . ?x property:found_in_taxon resource:Mus_musculus . ?x rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18298583
SYSTEM
Gm4922
Q18298583
AND((c(Q863908),P688,Q21986839), (c(Q863908),P703,Q83310))
action filter_type
action intersection
action find_reverse
entity Q21986839
relation P688
action find_reverse
entity Q83310
relation P703
type Q863908
Which nucleic acid sequences encodes Sperm motility kinase Z and are found in the taxon Mus musculus
{'AND': [[{'concept': 'Q863908'}, 'P688', 'Q21986839'], [{'concept': 'Q863908'}, 'P703', 'Q83310']]}
SELECT DISTINCT ?x WHERE { ?x property:P688 resource:Q21986839 . ?x property:P703 resource:Q83310 . ?x rdf:type ontology:Q863908 }
Gm4922
Which nucleic acid sequences encodes Sperm motility kinase Z and are found in the taxon Mus musculus
Gm4922
action filter_type
action intersection
action find_reverse
entity Sperm motility kinase Z
relation encodes
action find_reverse
entity Mus musculus
relation found in taxon
type nucleic acid sequence
{'AND': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Sperm motility kinase Z'], [{'concept': 'nucleic acid sequence'}, 'found in taxon', 'Mus musculus']]}
SELECT DISTINCT ?x WHERE { ?x property:encodes resource:Sperm_motility_kinase_Z . ?x property:found_in_taxon resource:Mus_musculus . ?x rdf:type ontology:nucleic_acid_sequence }
[]