Simple Question (Direct)
Simple Question
Q24267132
P702
Q863908
USER
Which nucleic acid sequence encodes trigger factor    KPHS_11390 ?
(Q24267132,P702,c(Q863908))
action filter_type
action find
entity Q24267132
relation P702
type Q863908
['Q24267132', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?k WHERE { resource:Q24267132 property:P702 ?k . ?k rdf:type ontology:Q863908 }
trigger factor    KPHS_11390
action filter_type
action find
entity trigger factor    KPHS_11390
relation encoded by
type nucleic acid sequence
['trigger factor    KPHS_11390', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?k WHERE { resource:trigger_factor____KPHS_11390 property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23120632
SYSTEM
trigger factor    KPHS_11390
Q23120632
(Q24267132,P702,c(Q863908))
action filter_type
action find
entity Q24267132
relation P702
type Q863908
Trigger factor KPHS 11390 encodes trigger factor KPHS_11390
['Q24267132', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?k WHERE { resource:Q24267132 property:P702 ?k . ?k rdf:type ontology:Q863908 }
trigger factor    KPHS_11390
Trigger factor KPHS 11390 encodes trigger factor KPHS_11390
trigger factor    KPHS_11390
action filter_type
action find
entity trigger factor    KPHS_11390
relation encoded by
type nucleic acid sequence
['trigger factor    KPHS_11390', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?k WHERE { resource:trigger_factor____KPHS_11390 property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24267132
P682
Q2996394
USER
Which biological process is trigger factor    KPHS_11390 involved in ?
(Q24267132,P682,c(Q2996394))
action filter_type
action find
entity Q24267132
relation P682
type Q2996394
['Q24267132', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?b WHERE { resource:Q24267132 property:P682 ?b . ?b rdf:type ontology:Q2996394 }
trigger factor    KPHS_11390
action filter_type
action find
entity trigger factor    KPHS_11390
relation biological process
type biological process
['trigger factor    KPHS_11390', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?b WHERE { resource:trigger_factor____KPHS_11390 property:biological_process ?b . ?b rdf:type ontology:biological_process }
[]
biological process
Q847556
SYSTEM
protein folding
Q847556
(Q24267132,P682,c(Q2996394))
action filter_type
action find
entity Q24267132
relation P682
type Q2996394
Which biological process is trigger factor KPHS_11390 involved in
['Q24267132', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?b WHERE { resource:Q24267132 property:P682 ?b . ?b rdf:type ontology:Q2996394 }
protein folding
Which biological process is trigger factor KPHS_11390 involved in
protein folding
action filter_type
action find
entity trigger factor    KPHS_11390
relation biological process
type biological process
['trigger factor    KPHS_11390', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?b WHERE { resource:trigger_factor____KPHS_11390 property:biological_process ?b . ?b rdf:type ontology:biological_process }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24267132
P681
Q15989253
USER
Which part is a component of that nutrient ?
(Q847556,P681,c(Q15989253))
action filter_type
action find
entity Q24267132
relation P681
type Q15989253
['Q847556', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?l WHERE { resource:Q24267132 property:P681 ?l . ?l rdf:type ontology:Q15989253 }
trigger factor    KPHS_11390
action filter_type
action find
entity trigger factor    KPHS_11390
relation cell component
type part
['protein folding', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?l WHERE { resource:trigger_factor____KPHS_11390 property:cell_component ?l . ?l rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q847556,P681,c(Q15989253))
action filter_type
action find
entity Q24267132
relation P681
type Q15989253
[ANSWER] is a component of that nutrient
['Q847556', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?l WHERE { resource:Q24267132 property:P681 ?l . ?l rdf:type ontology:Q15989253 }
cytoplasm
Cytoplasm is a component of that nutrient
cytoplasm
action filter_type
action find
entity trigger factor    KPHS_11390
relation cell component
type part
['protein folding', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?l WHERE { resource:trigger_factor____KPHS_11390 property:cell_component ?l . ?l rdf:type ontology:part }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q22294736
P361
Q151885 Q2996394 Q2996394
USER
Which biological processes are a portion of greater number of concepts and biological processes than transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission ?
(c(Q2996394),P361,c(Q151885)|c(Q2996394))
action greater
action union
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action find_tuple_counts
relation P361
type Q2996394
type Q2996394
action count
action filter_multi_types
action find
entity Q22294736
relation P361
type Q151885
type Q2996394
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q151885'}, {'concept': 'Q2996394'}]]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ?k ( COUNT ( ?p ) AS ?n ) WHERE { { ?k property:P361 ?p . ?k rdf:type ontology:Q2996394 . ?p rdf:type ontology:Q151885 } UNION { ?k property:P361 ?p . ?p rdf:type ontology:Q2996394 . ?k rdf:type ontology:Q2996394 } } GROUP BY ?k } . { SELECT DISTINCT ( COUNT ( ?z ) AS ?e ) WHERE { resource:Q22294736 property:P361 ?z . { VALUES ( ?v ) { ( ontology:Q2996394 ) ( ontology:Q151885 ) } . ?z rdf:type ?v } } } . FILTER ( ?n > ?e ) }
transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission
action greater
action union
action find_tuple_counts
relation part of
type biological process
type concept
action find_tuple_counts
relation part of
type biological process
type biological process
action count
action filter_multi_types
action find
entity transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission
relation part of
type concept
type biological process
[{'concept': 'biological process'}, 'part of', [{'concept': 'concept'}, {'concept': 'biological process'}]]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ?k ( COUNT ( ?p ) AS ?n ) WHERE { { ?k property:part_of ?p . ?k rdf:type ontology:biological_process . ?p rdf:type ontology:concept } UNION { ?k property:part_of ?p . ?p rdf:type ontology:biological_process . ?k rdf:type ontology:biological_process } } GROUP BY ?k } . { SELECT DISTINCT ( COUNT ( ?z ) AS ?e ) WHERE { resource:transmembrane_receptor_protein_serine/threonine_kinase_signaling_pathway_involved_in_floral_organ_abscission property:part_of ?z . { VALUES ( ?v ) { ( ontology:biological_process ) ( ontology:concept ) } . ?z rdf:type ?v } } } . FILTER ( ?n > ?e ) }
[]
concept biological process biological process
Q22291145 Q21104832 Q22294591
SYSTEM
establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification, synaptic vesicle exocytosis, mitotic cell cycle arrest in response to pheromone
Q22294591 Q21107328 Q22294585 Q14860198 Q949618 Q14897640 Q21116174 Q14864099 Q22280551 Q21111890 Q22269731 Q22279989 Q27122058 Q14865659 Q14914558 Q21149516 Q22279517 Q22281166 Q22284167 Q22279591 Q15320925 Q22291145 Q22294726 Q22294880 Q21127160 Q22270384 Q21106668 Q22280424 Q14864210 Q22302766 Q22294463 Q14864899 Q14904772 Q14904771 Q21108839 Q22279704 Q21104832 Q22269699 Q14873676 Q21114820
(c(Q2996394),P361,c(Q151885)|c(Q2996394))
action greater
action union
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action find_tuple_counts
relation P361
type Q2996394
type Q2996394
action count
action filter_multi_types
action find
entity Q22294736
relation P361
type Q151885
type Q2996394
[ANSWERS] are a portion of greater number of concepts and biological processes than transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q151885'}, {'concept': 'Q2996394'}]]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ?k ( COUNT ( ?p ) AS ?n ) WHERE { { ?k property:P361 ?p . ?k rdf:type ontology:Q2996394 . ?p rdf:type ontology:Q151885 } UNION { ?k property:P361 ?p . ?p rdf:type ontology:Q2996394 . ?k rdf:type ontology:Q2996394 } } GROUP BY ?k } . { SELECT DISTINCT ( COUNT ( ?z ) AS ?e ) WHERE { resource:Q22294736 property:P361 ?z . { VALUES ( ?v ) { ( ontology:Q2996394 ) ( ontology:Q151885 ) } . ?z rdf:type ?v } } } . FILTER ( ?n > ?e ) }
mitotic cell cycle arrest in response to pheromone development involved in symbiotic interaction adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion anatomical structure formation involved in morphogenesis Taxis synaptic vesicle docking synaptic vesicle targeting ovulation cycle process gene conversion at mating-type locus, termination of copy-synthesis synaptic vesicle priming movement in environment of other organism involved in symbiotic interaction gene conversion at mating-type locus, DNA double-strand break processing synaptic vesicle tethering involved in synaptic vesicle exocytosis tolerance induction nitrogen compound metabolic process organic substance metabolic process heteroduplex formation involved in gene conversion at mating-type locus gene conversion at mating-type locus, DNA double-strand break formation peptidyl-serine phosphorylation involved in acrosome reaction strand invasion involved in gene conversion at mating-type locus locomotion involved in locomotory behavior establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification DNA recombinase assembly involved in gene conversion at mating-type locus acquisition of nutrients from other organism during symbiotic interaction fertilization, exchange of chromosomal proteins dissemination or transmission of organism from other organism involved in symbiotic interaction synaptic vesicle fusion to presynaptic active zone membrane somatic diversification of immune receptors anatomical structure morphogenesis calcium-dependent activation of synaptic vesicle fusion sperm chromatin decondensation acrosome matrix dispersal spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation adhesion of symbiont to host gene conversion at mating-type locus, DNA repair synthesis synaptic vesicle exocytosis growth involved in symbiotic interaction cell motility spermatid nucleus elongation
Establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification, synaptic vesicle exocytosis and mitotic cell cycle arrest in response to pheromone are a portion of greater number of concepts and biological processes than transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission
establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification synaptic vesicle exocytosis mitotic cell cycle arrest in response to pheromone
action greater
action union
action find_tuple_counts
relation part of
type biological process
type concept
action find_tuple_counts
relation part of
type biological process
type biological process
action count
action filter_multi_types
action find
entity transmembrane receptor protein serine/threonine kinase signaling pathway involved in floral organ abscission
relation part of
type concept
type biological process
[{'concept': 'biological process'}, 'part of', [{'concept': 'concept'}, {'concept': 'biological process'}]]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ?k ( COUNT ( ?p ) AS ?n ) WHERE { { ?k property:part_of ?p . ?k rdf:type ontology:biological_process . ?p rdf:type ontology:concept } UNION { ?k property:part_of ?p . ?p rdf:type ontology:biological_process . ?k rdf:type ontology:biological_process } } GROUP BY ?k } . { SELECT DISTINCT ( COUNT ( ?z ) AS ?e ) WHERE { resource:transmembrane_receptor_protein_serine/threonine_kinase_signaling_pathway_involved_in_floral_organ_abscission property:part_of ?z . { VALUES ( ?v ) { ( ontology:biological_process ) ( ontology:concept ) } . ?z rdf:type ?v } } } . FILTER ( ?n > ?e ) }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type|Incomplete
Q14877671
P361
Q151885 Q2996394 Q2996394
USER
And how about cartilage condensation?
(c(Q2996394),P361,c(Q151885)|c(Q2996394))
action greater
action union
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action find_tuple_counts
relation P361
type Q2996394
type Q2996394
action count
action filter_multi_types
action find
entity Q14877671
relation P361
type Q151885
type Q2996394
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q151885'}, {'concept': 'Q2996394'}]]
SELECT DISTINCT ?x WHERE { { SELECT DISTINCT ( COUNT ( ?l ) AS ?t ) ?x WHERE { { ?x property:P361 ?l . ?l rdf:type ontology:Q2996394 . ?x rdf:type ontology:Q2996394 } UNION { ?l rdf:type ontology:Q151885 . ?x rdf:type ontology:Q2996394 . ?x property:P361 ?l } } GROUP BY ?x } . { SELECT DISTINCT ( COUNT ( ?p ) AS ?b ) WHERE { resource:Q14877671 property:P361 ?p . { { ?p rdf:type ontology:Q151885 } UNION { ?p rdf:type ontology:Q2996394 } } } } . FILTER ( ?t > ?b ) }
cartilage condensation
action greater
action union
action find_tuple_counts
relation part of
type biological process
type concept
action find_tuple_counts
relation part of
type biological process
type biological process
action count
action filter_multi_types
action find
entity cartilage condensation
relation part of
type concept
type biological process
[{'concept': 'biological process'}, 'part of', [{'concept': 'concept'}, {'concept': 'biological process'}]]
SELECT DISTINCT ?x WHERE { { SELECT DISTINCT ( COUNT ( ?l ) AS ?t ) ?x WHERE { { ?x property:part_of ?l . ?l rdf:type ontology:biological_process . ?x rdf:type ontology:biological_process } UNION { ?l rdf:type ontology:concept . ?x rdf:type ontology:biological_process . ?x property:part_of ?l } } GROUP BY ?x } . { SELECT DISTINCT ( COUNT ( ?p ) AS ?b ) WHERE { resource:cartilage_condensation property:part_of ?p . { { ?p rdf:type ontology:concept } UNION { ?p rdf:type ontology:biological_process } } } } . FILTER ( ?t > ?b ) }
[]
concept biological process biological process
Q22291145 Q21104832 Q22294591
SYSTEM
establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification, synaptic vesicle exocytosis, mitotic cell cycle arrest in response to pheromone
Q22294591 Q21107328 Q22294585 Q14860198 Q949618 Q14897640 Q21116174 Q14864099 Q22280551 Q21111890 Q22269731 Q22279989 Q27122058 Q14865659 Q14914558 Q21149516 Q22279517 Q22281166 Q22284167 Q22279591 Q15320925 Q22291145 Q22294726 Q22294880 Q21127160 Q22270384 Q21106668 Q22280424 Q14864210 Q22302766 Q22294463 Q14864899 Q14904772 Q14904771 Q21108839 Q22279704 Q21104832 Q22269699 Q14873676 Q21114820
(c(Q2996394),P361,c(Q151885)|c(Q2996394))
action greater
action union
action find_tuple_counts
relation P361
type Q2996394
type Q151885
action find_tuple_counts
relation P361
type Q2996394
type Q2996394
action count
action filter_multi_types
action find
entity Q14877671
relation P361
type Q151885
type Q2996394
[ANSWERS]
[{'concept': 'Q2996394'}, 'P361', [{'concept': 'Q151885'}, {'concept': 'Q2996394'}]]
SELECT DISTINCT ?x WHERE { { SELECT DISTINCT ( COUNT ( ?l ) AS ?t ) ?x WHERE { { ?x property:P361 ?l . ?l rdf:type ontology:Q2996394 . ?x rdf:type ontology:Q2996394 } UNION { ?l rdf:type ontology:Q151885 . ?x rdf:type ontology:Q2996394 . ?x property:P361 ?l } } GROUP BY ?x } . { SELECT DISTINCT ( COUNT ( ?p ) AS ?b ) WHERE { resource:Q14877671 property:P361 ?p . { { ?p rdf:type ontology:Q151885 } UNION { ?p rdf:type ontology:Q2996394 } } } } . FILTER ( ?t > ?b ) }
mitotic cell cycle arrest in response to pheromone development involved in symbiotic interaction adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion anatomical structure formation involved in morphogenesis Taxis synaptic vesicle docking synaptic vesicle targeting ovulation cycle process gene conversion at mating-type locus, termination of copy-synthesis synaptic vesicle priming movement in environment of other organism involved in symbiotic interaction gene conversion at mating-type locus, DNA double-strand break processing synaptic vesicle tethering involved in synaptic vesicle exocytosis tolerance induction nitrogen compound metabolic process organic substance metabolic process heteroduplex formation involved in gene conversion at mating-type locus gene conversion at mating-type locus, DNA double-strand break formation peptidyl-serine phosphorylation involved in acrosome reaction strand invasion involved in gene conversion at mating-type locus locomotion involved in locomotory behavior establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification DNA recombinase assembly involved in gene conversion at mating-type locus acquisition of nutrients from other organism during symbiotic interaction fertilization, exchange of chromosomal proteins dissemination or transmission of organism from other organism involved in symbiotic interaction synaptic vesicle fusion to presynaptic active zone membrane somatic diversification of immune receptors anatomical structure morphogenesis calcium-dependent activation of synaptic vesicle fusion sperm chromatin decondensation acrosome matrix dispersal spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation adhesion of symbiont to host gene conversion at mating-type locus, DNA repair synthesis synaptic vesicle exocytosis growth involved in symbiotic interaction cell motility spermatid nucleus elongation
establishment of oocyte nucleus localization involved in oocyte dorsal/ventral axis specification synaptic vesicle exocytosis mitotic cell cycle arrest in response to pheromone
action greater
action union
action find_tuple_counts
relation part of
type biological process
type concept
action find_tuple_counts
relation part of
type biological process
type biological process
action count
action filter_multi_types
action find
entity cartilage condensation
relation part of
type concept
type biological process
[{'concept': 'biological process'}, 'part of', [{'concept': 'concept'}, {'concept': 'biological process'}]]
SELECT DISTINCT ?x WHERE { { SELECT DISTINCT ( COUNT ( ?l ) AS ?t ) ?x WHERE { { ?x property:part_of ?l . ?l rdf:type ontology:biological_process . ?x rdf:type ontology:biological_process } UNION { ?l rdf:type ontology:concept . ?x rdf:type ontology:biological_process . ?x property:part_of ?l } } GROUP BY ?x } . { SELECT DISTINCT ( COUNT ( ?p ) AS ?b ) WHERE { resource:cartilage_condensation property:part_of ?p . { { ?p rdf:type ontology:concept } UNION { ?p rdf:type ontology:biological_process } } } } . FILTER ( ?t > ?b ) }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q79529 Q181394 Q181394
USER
Which nutrients can interact with approximately 12 chemical substances or nutrients ?
(c(Q181394),P129,c(Q79529)|c(Q181394))
action approx
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q181394
value 12
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?p ) ?o WHERE { { ?o property:P129 ?w . ?o rdf:type ontology:Q181394 . ?w rdf:type ontology:Q79529 } UNION { ?o property:P129 ?w . ?o rdf:type ontology:Q181394 . ?w rdf:type ontology:Q181394 } } GROUP BY ?o } . FILTER ( ?p = 12 ) }
action approx
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 12
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?p ) ?o WHERE { { ?o property:physically_interacts_with ?w . ?o rdf:type ontology:nutrient . ?w rdf:type ontology:chemical_substance } UNION { ?o property:physically_interacts_with ?w . ?o rdf:type ontology:nutrient . ?w rdf:type ontology:nutrient } } GROUP BY ?o } . FILTER ( ?p = 12 ) }
[]
chemical substance nutrient nutrient
Q2034004 Q5123372 Q21110872
SYSTEM
D(2) dopamine receptor, Mu-type opioid receptor, D(3) dopamine receptor
Q21110942 Q21116154 Q309513 Q308856 Q4847910 Q413209 Q21154358 Q5123372 Q1486720 Q21109365 Q15323278 Q4847900 Q4847907 Q5512777 Q21116164 Q2844056 Q21115334 Q21110872 Q21114578 Q21114576 Q21131500 Q7673856 Q21115961 Q21115962 Q21115965 Q311568 Q3062781 Q12746120 Q5629167 Q21115815 Q21115816 Q21115819 Q7834290 Q21114585 Q21114582 Q21497939 Q21497937 Q21130911 Q21150595 Q15324694 Q21109359 Q15324415 Q2034004
(c(Q181394),P129,c(Q79529)|c(Q181394))
action approx
action union
action find_tuple_counts
relation P129
type Q181394
type Q79529
action find_tuple_counts
relation P129
type Q181394
type Q181394
value 12
[ANSWERS] can interact with approximately 12 chemical substances or nutrients
[{'concept': 'Q181394'}, 'P129', [{'concept': 'Q79529'}, {'concept': 'Q181394'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?p ) ?o WHERE { { ?o property:P129 ?w . ?o rdf:type ontology:Q181394 . ?w rdf:type ontology:Q79529 } UNION { ?o property:P129 ?w . ?o rdf:type ontology:Q181394 . ?w rdf:type ontology:Q181394 } } GROUP BY ?o } . FILTER ( ?p = 12 ) }
G-protein coupled receptor 55 Adenosine receptor A3 Histamine H1 receptor D(4) dopamine receptor Muscarinic acetylcholine receptor M2 Transient receptor potential cation channel subfamily V member 1 Histone deacetylase 3 Mu-type opioid receptor Glutamate receptor 3 5-hydroxytryptamine receptor 4 Transient receptor potential cation channel subfamily A member 1 Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 Gamma-aminobutyric acid receptor subunit alpha-4 Adenosine receptor A2b Muscarinic acetylcholine receptor M3 Delta-type opioid receptor D(3) dopamine receptor Gamma-aminobutyric acid receptor subunit alpha-3 Gamma-aminobutyric acid receptor subunit alpha-5 D(1B) dopamine receptor Substance-P receptor Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Histamine H2 receptor Adenosine receptor A1 Muscarinic acetylcholine receptor M5 Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-6 Gamma-aminobutyric acid receptor subunit alpha-2 5-hydroxytryptamine receptor 7 5-hydroxytryptamine receptor 5A Glutamate receptor ionotropic, NMDA 2D Cannabinoid receptor 2 Transient receptor potential cation channel subfamily V member 3 5-hydroxytryptamine receptor 5A Transient receptor potential cation channel subfamily M member 8 D(2) dopamine receptor
D(2) dopamine receptor, Mu-type opioid receptor and D(3) dopamine receptor can interact with approximately 12 chemical substances or nutrients
D(2) dopamine receptor Mu-type opioid receptor D(3) dopamine receptor
action approx
action union
action find_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 12
[{'concept': 'nutrient'}, 'physically interacts with', [{'concept': 'chemical substance'}, {'concept': 'nutrient'}]]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?p ) ?o WHERE { { ?o property:physically_interacts_with ?w . ?o rdf:type ontology:nutrient . ?w rdf:type ontology:chemical_substance } UNION { ?o property:physically_interacts_with ?w . ?o rdf:type ontology:nutrient . ?w rdf:type ontology:nutrient } } GROUP BY ?o } . FILTER ( ?p = 12 ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q24148440 Q24267132
P703
Q631147
USER
Which infraspecific names are trigger factor    KPHS_11390 or phosphate transporter, low-affinity    ECUMN_3978 found in ?
OR((Q24267132,P703,c(Q631147)), (Q24148440,P703,c(Q631147)))
action filter_type
action union
action find
entity Q24267132
relation P703
action find
entity Q24148440
relation P703
type Q631147
{'OR': [['Q24267132', 'P703', {'concept': 'Q631147'}], ['Q24148440', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?m WHERE { { VALUES ( ?k ) { ( resource:Q24267132 ) ( resource:Q24148440 ) } . ?k property:P703 ?m } . ?m rdf:type ontology:Q631147 }
phosphate transporter, low-affinity    ECUMN_3978 trigger factor    KPHS_11390
action filter_type
action union
action find
entity trigger factor    KPHS_11390
relation found in taxon
action find
entity phosphate transporter, low-affinity    ECUMN_3978
relation found in taxon
type infraspecific name
{'OR': [['trigger factor    KPHS_11390', 'found in taxon', {'concept': 'infraspecific name'}], ['phosphate transporter, low-affinity    ECUMN_3978', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?m WHERE { { VALUES ( ?k ) { ( resource:trigger_factor____KPHS_11390 ) ( resource:phosphate_transporter,_low-affinity____ECUMN_3978 ) } . ?k property:found_in_taxon ?m } . ?m rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102939 Q21102931
SYSTEM
Klebsiella pneumoniae subsp. pneumoniae HS11286, Escherichia coli UMN026
Q21102939 Q21102931
OR((Q24267132,P703,c(Q631147)), (Q24148440,P703,c(Q631147)))
action filter_type
action union
action find
entity Q24267132
relation P703
action find
entity Q24148440
relation P703
type Q631147
Species [ANSWERS] are trigger factor KPHS_11390 or phosphate transporter, low-affinity ECUMN_3978 found in
{'OR': [['Q24267132', 'P703', {'concept': 'Q631147'}], ['Q24148440', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?m WHERE { { VALUES ( ?k ) { ( resource:Q24267132 ) ( resource:Q24148440 ) } . ?k property:P703 ?m } . ?m rdf:type ontology:Q631147 }
Klebsiella pneumoniae subsp. pneumoniae HS11286 Escherichia coli UMN026
Species Klebsiella pneumoniae subsp. pneumoniae HS11286 and Escherichia coli UMN026 are trigger factor KPHS_11390 or phosphate transporter, low-affinity ECUMN_3978 found in
Klebsiella pneumoniae subsp. pneumoniae HS11286 Escherichia coli UMN026
action filter_type
action union
action find
entity trigger factor    KPHS_11390
relation found in taxon
action find
entity phosphate transporter, low-affinity    ECUMN_3978
relation found in taxon
type infraspecific name
{'OR': [['trigger factor    KPHS_11390', 'found in taxon', {'concept': 'infraspecific name'}], ['phosphate transporter, low-affinity    ECUMN_3978', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?m WHERE { { VALUES ( ?k ) { ( resource:trigger_factor____KPHS_11390 ) ( resource:phosphate_transporter,_low-affinity____ECUMN_3978 ) } . ?k property:found_in_taxon ?m } . ?m rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q24269866 Q24267132
P703
Q631147
USER
Which infraspecific names do trigger factor    KPHS_11390 and putative aldo-keto reductase    KPHS_43070 belong to ?
AND((Q24267132,P703,c(Q631147)), (Q24269866,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q24267132
relation P703
action find
entity Q24269866
relation P703
type Q631147
{'AND': [['Q24267132', 'P703', {'concept': 'Q631147'}], ['Q24269866', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?s WHERE { resource:Q24267132 property:P703 ?s . resource:Q24269866 property:P703 ?s . ?s rdf:type ontology:Q631147 }
putative aldo-keto reductase    KPHS_43070 trigger factor    KPHS_11390
action filter_type
action intersection
action find
entity trigger factor    KPHS_11390
relation found in taxon
action find
entity putative aldo-keto reductase    KPHS_43070
relation found in taxon
type infraspecific name
{'AND': [['trigger factor    KPHS_11390', 'found in taxon', {'concept': 'infraspecific name'}], ['putative aldo-keto reductase    KPHS_43070', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?s WHERE { resource:trigger_factor____KPHS_11390 property:found_in_taxon ?s . resource:putative_aldo-keto_reductase____KPHS_43070 property:found_in_taxon ?s . ?s rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102939
SYSTEM
Klebsiella pneumoniae subsp. pneumoniae HS11286
Q21102939
AND((Q24267132,P703,c(Q631147)), (Q24269866,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q24267132
relation P703
action find
entity Q24269866
relation P703
type Q631147
Trigger factor KPHS _11390 and putative aldo-keto reductase KPHS_43070 belong to [ANSWER]
{'AND': [['Q24267132', 'P703', {'concept': 'Q631147'}], ['Q24269866', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?s WHERE { resource:Q24267132 property:P703 ?s . resource:Q24269866 property:P703 ?s . ?s rdf:type ontology:Q631147 }
Klebsiella pneumoniae subsp. pneumoniae HS11286
Trigger factor KPHS _11390 and putative aldo-keto reductase KPHS_43070 belong to Klebsiella pneumoniae subsp. pneumoniae HS11286
Klebsiella pneumoniae subsp. pneumoniae HS11286
action filter_type
action intersection
action find
entity trigger factor    KPHS_11390
relation found in taxon
action find
entity putative aldo-keto reductase    KPHS_43070
relation found in taxon
type infraspecific name
{'AND': [['trigger factor    KPHS_11390', 'found in taxon', {'concept': 'infraspecific name'}], ['putative aldo-keto reductase    KPHS_43070', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?s WHERE { resource:trigger_factor____KPHS_11390 property:found_in_taxon ?s . resource:putative_aldo-keto_reductase____KPHS_43070 property:found_in_taxon ?s . ?s rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q24269866 Q292982
P702
Q863908
USER
How many nucleic acid sequences encodes putative aldo-keto reductase    KPHS_43070 or Alpha-1-antitrypsin ?
(Q24269866,P702,c(Q863908)) (Q292982,P702,c(Q863908))
action count
action union
action filter_type
action find
entity Q24269866
relation P702
type Q863908
action filter_type
action find
entity Q292982
relation P702
type Q863908
['Q24269866', 'P702', {'concept': 'Q863908'}] ['Q292982', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?m ) WHERE { { resource:Q24269866 property:P702 ?k . ?k rdf:type ontology:Q863908 } UNION { resource:Q292982 property:P702 ?k . ?k rdf:type ontology:Q863908 } }
putative aldo-keto reductase    KPHS_43070 Alpha-1-antitrypsin
action count
action union
action filter_type
action find
entity putative aldo-keto reductase    KPHS_43070
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity Alpha-1-antitrypsin
relation encoded by
type nucleic acid sequence
['putative aldo-keto reductase    KPHS_43070', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Alpha-1-antitrypsin', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?m ) WHERE { { resource:putative_aldo-keto_reductase____KPHS_43070 property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence } UNION { resource:Alpha-1-antitrypsin property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence } }
[]
nucleic acid sequence
SYSTEM
2
Q23126511 Q14860537
(Q24269866,P702,c(Q863908)) (Q292982,P702,c(Q863908))
action count
action union
action filter_type
action find
entity Q24269866
relation P702
type Q863908
action filter_type
action find
entity Q292982
relation P702
type Q863908
[ANSWER]
['Q24269866', 'P702', {'concept': 'Q863908'}] ['Q292982', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?m ) WHERE { { resource:Q24269866 property:P702 ?k . ?k rdf:type ontology:Q863908 } UNION { resource:Q292982 property:P702 ?k . ?k rdf:type ontology:Q863908 } }
putative aldo-keto reductase    KPHS_43070 SERPINA1
2
action count
action union
action filter_type
action find
entity putative aldo-keto reductase    KPHS_43070
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity Alpha-1-antitrypsin
relation encoded by
type nucleic acid sequence
['putative aldo-keto reductase    KPHS_43070', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Alpha-1-antitrypsin', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?k ) AS ?m ) WHERE { { resource:putative_aldo-keto_reductase____KPHS_43070 property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence } UNION { resource:Alpha-1-antitrypsin property:encoded_by ?k . ?k rdf:type ontology:nucleic_acid_sequence } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type
Q14916317
P682
Q3249551 Q181394
USER
Which processes are approximately the same number of nutrients involved in as immune system process ?
(c(Q181394),P682,c(Q3249551))
action approx
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find
entity Q14916317
relation P682
type Q3249551
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ?w ( COUNT ( ?q ) AS ?o ) WHERE { ?q property:P682 ?w . ?w rdf:type ontology:Q3249551 . ?q rdf:type ontology:Q181394 } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?f ) AS ?i ) WHERE { resource:Q14916317 property:P682 ?f . ?f rdf:type ontology:Q3249551 } } . FILTER ( ?o = ?i ) }
immune system process
action approx
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find
entity immune system process
relation biological process
type process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ?w ( COUNT ( ?q ) AS ?o ) WHERE { ?q property:biological_process ?w . ?w rdf:type ontology:process . ?q rdf:type ontology:nutrient } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?f ) AS ?i ) WHERE { resource:immune_system_process property:biological_process ?f . ?f rdf:type ontology:process } } . FILTER ( ?o = ?i ) }
[]
process nutrient
Q306383 Q14885910 Q162925
SYSTEM
G1/S transition of mitotic cell cycle, reproductive process, meiotic nuclear division
Q22269718 Q306383 Q14820058 Q22284496 Q22271548 Q9332 Q22293230 Q14873025 Q14916317 Q14859560 Q14865172 Q14885910 Q14864472 Q162925
(c(Q181394),P682,c(Q3249551))
action approx
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find
entity Q14916317
relation P682
type Q3249551
[ANSWERS] are approximately the same number of nutrients involved in as immune system process
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ?w ( COUNT ( ?q ) AS ?o ) WHERE { ?q property:P682 ?w . ?w rdf:type ontology:Q3249551 . ?q rdf:type ontology:Q181394 } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?f ) AS ?i ) WHERE { resource:Q14916317 property:P682 ?f . ?f rdf:type ontology:Q3249551 } } . FILTER ( ?o = ?i ) }
locomotion G1/S transition of mitotic cell cycle growth biological regulation cell killing behavior developmental process cellular process immune system process response to stimulus signaling reproductive process rhythmic process meiotic nuclear division
G1/S transition of mitotic cell cycle, reproductive process and meiotic nuclear division are approximately the same number of nutrients involved in as immune system process
G1/S transition of mitotic cell cycle reproductive process meiotic nuclear division
action approx
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find
entity immune system process
relation biological process
type process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?w WHERE { { SELECT DISTINCT ?w ( COUNT ( ?q ) AS ?o ) WHERE { ?q property:biological_process ?w . ?w rdf:type ontology:process . ?q rdf:type ontology:nutrient } GROUP BY ?w } . { SELECT DISTINCT ( COUNT ( ?f ) AS ?i ) WHERE { resource:immune_system_process property:biological_process ?f . ?f rdf:type ontology:process } } . FILTER ( ?o = ?i ) }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Incomplete
Q162925
P682
Q3249551 Q181394
USER
And also tell me about meiotic nuclear division?
(c(Q181394),P682,c(Q3249551))
action approx
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find
entity Q162925
relation P682
type Q3249551
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ?d ( COUNT ( ?s ) AS ?i ) WHERE { ?s property:P682 ?d . ?d rdf:type ontology:Q3249551 . ?s rdf:type ontology:Q181394 } GROUP BY ?d } . FILTER ( ?i = ?f ) . { SELECT DISTINCT ( COUNT ( ?k ) AS ?f ) WHERE { ?k rdf:type ontology:Q3249551 . resource:Q162925 property:P682 ?k } } }
meiotic nuclear division
action approx
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find
entity meiotic nuclear division
relation biological process
type process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ?d ( COUNT ( ?s ) AS ?i ) WHERE { ?s property:biological_process ?d . ?d rdf:type ontology:process . ?s rdf:type ontology:nutrient } GROUP BY ?d } . FILTER ( ?i = ?f ) . { SELECT DISTINCT ( COUNT ( ?k ) AS ?f ) WHERE { ?k rdf:type ontology:process . resource:meiotic_nuclear_division property:biological_process ?k } } }
[]
process nutrient
Q306383 Q14885910 Q162925
SYSTEM
G1/S transition of mitotic cell cycle, reproductive process, meiotic nuclear division
Q22269718 Q306383 Q14820058 Q22284496 Q22271548 Q9332 Q22293230 Q14873025 Q14916317 Q14859560 Q14865172 Q14885910 Q14864472 Q162925
(c(Q181394),P682,c(Q3249551))
action approx
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find
entity Q162925
relation P682
type Q3249551
[ANSWERS]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ?d ( COUNT ( ?s ) AS ?i ) WHERE { ?s property:P682 ?d . ?d rdf:type ontology:Q3249551 . ?s rdf:type ontology:Q181394 } GROUP BY ?d } . FILTER ( ?i = ?f ) . { SELECT DISTINCT ( COUNT ( ?k ) AS ?f ) WHERE { ?k rdf:type ontology:Q3249551 . resource:Q162925 property:P682 ?k } } }
locomotion G1/S transition of mitotic cell cycle growth biological regulation cell killing behavior developmental process cellular process immune system process response to stimulus signaling reproductive process rhythmic process meiotic nuclear division
G1/S transition of mitotic cell cycle reproductive process meiotic nuclear division
action approx
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find
entity meiotic nuclear division
relation biological process
type process
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ?d ( COUNT ( ?s ) AS ?i ) WHERE { ?s property:biological_process ?d . ?d rdf:type ontology:process . ?s rdf:type ontology:nutrient } GROUP BY ?d } . FILTER ( ?i = ?f ) . { SELECT DISTINCT ( COUNT ( ?k ) AS ?f ) WHERE { ?k rdf:type ontology:process . resource:meiotic_nuclear_division property:biological_process ?k } } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24267132
P688
Q863908
USER
Which nucleic acid sequence encodes trigger factor    KPHS_11390 ?
(c(Q863908),P688,Q24267132)
action filter_type
action find_reverse
entity Q24267132
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24267132']
SELECT DISTINCT ?k WHERE { ?k property:P688 resource:Q24267132 . ?k rdf:type ontology:Q863908 }
trigger factor    KPHS_11390
action filter_type
action find_reverse
entity trigger factor    KPHS_11390
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'trigger factor    KPHS_11390']
SELECT DISTINCT ?k WHERE { ?k property:encodes resource:trigger_factor____KPHS_11390 . ?k rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23120632
SYSTEM
trigger factor    KPHS_11390
Q23120632
(c(Q863908),P688,Q24267132)
action filter_type
action find_reverse
entity Q24267132
relation P688
type Q863908
Trigger factor KPHS 11390 encodes trigger factor KPHS_11390
[{'concept': 'Q863908'}, 'P688', 'Q24267132']
SELECT DISTINCT ?k WHERE { ?k property:P688 resource:Q24267132 . ?k rdf:type ontology:Q863908 }
trigger factor    KPHS_11390
Trigger factor KPHS 11390 encodes trigger factor KPHS_11390
trigger factor    KPHS_11390
action filter_type
action find_reverse
entity trigger factor    KPHS_11390
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'trigger factor    KPHS_11390']
SELECT DISTINCT ?k WHERE { ?k property:encodes resource:trigger_factor____KPHS_11390 . ?k rdf:type ontology:nucleic_acid_sequence }
[]