Simple Question (Direct)
Simple Question
Q21115244
P681
Q15989253
USER
What is a component of DNA dC->dU-editing enzyme APOBEC-3F ?
(Q21115244,P681,c(Q15989253))
action filter_type
action find
entity Q21115244
relation P681
type Q15989253
['Q21115244', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q15989253 . resource:Q21115244 property:P681 ?p }
DNA dC->dU-editing enzyme APOBEC-3F
action filter_type
action find
entity DNA dC->dU-editing enzyme APOBEC-3F
relation cell component
type part
['DNA dC->dU-editing enzyme APOBEC-3F', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:part . resource:DNA_dC->dU-editing_enzyme_APOBEC-3F property:cell_component ?p }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q21115244,P681,c(Q15989253))
action filter_type
action find
entity Q21115244
relation P681
type Q15989253
A component of DNA dC-> dU -editing enzyme APOBEC-3F is a [ANSWER]
['Q21115244', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q15989253 . resource:Q21115244 property:P681 ?p }
cytoplasm
A component of DNA dC-> dU -editing enzyme APOBEC-3F is a cytoplasm
cytoplasm
action filter_type
action find
entity DNA dC->dU-editing enzyme APOBEC-3F
relation cell component
type part
['DNA dC->dU-editing enzyme APOBEC-3F', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:part . resource:DNA_dC->dU-editing_enzyme_APOBEC-3F property:cell_component ?p }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21115244
P688
Q863908
USER
Which nucleic acid sequence encodes DNA dC->dU-editing enzyme APOBEC-3F ?
(c(Q863908),P688,Q21115244)
action filter_type
action find_reverse
entity Q21115244
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21115244']
SELECT DISTINCT ?b WHERE { ?b property:P688 resource:Q21115244 . ?b rdf:type ontology:Q863908 }
DNA dC->dU-editing enzyme APOBEC-3F
action filter_type
action find_reverse
entity DNA dC->dU-editing enzyme APOBEC-3F
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'DNA dC->dU-editing enzyme APOBEC-3F']
SELECT DISTINCT ?b WHERE { ?b property:encodes resource:DNA_dC->dU-editing_enzyme_APOBEC-3F . ?b rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18053169
SYSTEM
APOBEC3F
Q18053169
(c(Q863908),P688,Q21115244)
action filter_type
action find_reverse
entity Q21115244
relation P688
type Q863908
[ANSWER] encodes DNA dC->dU-editing enzyme APOBEC-3F
[{'concept': 'Q863908'}, 'P688', 'Q21115244']
SELECT DISTINCT ?b WHERE { ?b property:P688 resource:Q21115244 . ?b rdf:type ontology:Q863908 }
APOBEC3F
APOBEC3F encodes DNA dC->dU-editing enzyme APOBEC-3F
APOBEC3F
action filter_type
action find_reverse
entity DNA dC->dU-editing enzyme APOBEC-3F
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'DNA dC->dU-editing enzyme APOBEC-3F']
SELECT DISTINCT ?b WHERE { ?b property:encodes resource:DNA_dC->dU-editing_enzyme_APOBEC-3F . ?b rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18053169
P703
Q16521
USER
Which taxon is that nucleic acid sequence found in ?
(Q18053169,P703,c(Q16521))
action filter_type
action find
entity Q18053169
relation P703
type Q16521
['Q18053169', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?a WHERE { resource:Q18053169 property:P703 ?a . ?a rdf:type ontology:Q16521 }
APOBEC3F
action filter_type
action find
entity APOBEC3F
relation found in taxon
type taxon
['APOBEC3F', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?a WHERE { resource:APOBEC3F property:found_in_taxon ?a . ?a rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q18053169,P703,c(Q16521))
action filter_type
action find
entity Q18053169
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
['Q18053169', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?a WHERE { resource:Q18053169 property:P703 ?a . ?a rdf:type ontology:Q16521 }
Homo sapiens
That nucleic acid sequence is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity APOBEC3F
relation found in taxon
type taxon
['APOBEC3F', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?a WHERE { resource:APOBEC3F property:found_in_taxon ?a . ?a rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18053169
P702
Q181394
USER
What is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q15978631)
action filter_type
action find_reverse
entity Q18053169
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q15978631']
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:Q181394 . ?l property:P702 resource:Q18053169 }
APOBEC3F
action filter_type
action find_reverse
entity APOBEC3F
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Homo sapiens']
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:nutrient . ?l property:encoded_by resource:APOBEC3F }
[]
nutrient
Q21115244
SYSTEM
DNA dC->dU-editing enzyme APOBEC-3F
Q21115244
(c(Q181394),P702,Q15978631)
action filter_type
action find_reverse
entity Q18053169
relation P702
type Q181394
The [ANSWER] is encoded by that nucleic acid sequence
[{'concept': 'Q181394'}, 'P702', 'Q15978631']
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:Q181394 . ?l property:P702 resource:Q18053169 }
DNA dC->dU-editing enzyme APOBEC-3F
The DNA dC->dU-editing enzyme APOBEC-3F is encoded by that nucleic acid sequence
DNA dC->dU-editing enzyme APOBEC-3F
action filter_type
action find_reverse
entity APOBEC3F
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Homo sapiens']
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:nutrient . ?l property:encoded_by resource:APOBEC3F }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Indirect
P702
Q863908
USER
How many nucleic acid sequences encode that nutrient ?
(Q21115244,P702,c(Q863908))
action count
action filter_type
action find
entity Q21115244
relation P702
type Q863908
['Q21115244', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?f ) WHERE { ?s rdf:type ontology:Q863908 . resource:Q21115244 property:P702 ?s }
action count
action filter_type
action find
entity DNA dC->dU-editing enzyme APOBEC-3F
relation encoded by
type nucleic acid sequence
['DNA dC->dU-editing enzyme APOBEC-3F', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?f ) WHERE { ?s rdf:type ontology:nucleic_acid_sequence . resource:DNA_dC->dU-editing_enzyme_APOBEC-3F property:encoded_by ?s }
[]
nucleic acid sequence
SYSTEM
1
Q18053169
(Q21115244,P702,c(Q863908))
action count
action filter_type
action find
entity Q21115244
relation P702
type Q863908
[ANSWER]
['Q21115244', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?f ) WHERE { ?s rdf:type ontology:Q863908 . resource:Q21115244 property:P702 ?s }
APOBEC3F
1
action count
action filter_type
action find
entity DNA dC->dU-editing enzyme APOBEC-3F
relation encoded by
type nucleic acid sequence
['DNA dC->dU-editing enzyme APOBEC-3F', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?f ) WHERE { ?s rdf:type ontology:nucleic_acid_sequence . resource:DNA_dC->dU-editing_enzyme_APOBEC-3F property:encoded_by ?s }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q8386
USER
Which nutrients do atleast 37 nutrients or drugs interact with ?
(c(Q181394)|c(Q8386),P129,c(Q181394))
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 37
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ?t ( COUNT ( ?g ) AS ?j ) WHERE { VALUES ( ?e ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?g rdf:type ?e } GROUP BY ?t } . FILTER ( ?j >= 37 ) }
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 37
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ?t ( COUNT ( ?g ) AS ?j ) WHERE { VALUES ( ?e ) { ( ontology:drug ) ( ontology:nutrient ) } . ?g rdf:type ?e } GROUP BY ?t } . FILTER ( ?j >= 37 ) }
[]
nutrient nutrient drug
Q2034004 Q1949517 Q21115043
SYSTEM
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A, 5-hydroxytryptamine receptor 1A
Q309513 Q21115043 Q1949517 Q2034004
(c(Q181394)|c(Q8386),P129,c(Q181394))
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 37
Atleast 37 nutrients or drugs interact with [ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ?t ( COUNT ( ?g ) AS ?j ) WHERE { VALUES ( ?e ) { ( ontology:Q8386 ) ( ontology:Q181394 ) } . ?g rdf:type ?e } GROUP BY ?t } . FILTER ( ?j >= 37 ) }
Histamine H1 receptor 5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A D(2) dopamine receptor
Atleast 37 nutrients or drugs interact with D(2) dopamine receptor, 5-hydroxytryptamine receptor 2A and 5-hydroxytryptamine receptor 1A
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 1A
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 37
[[{'concept': 'nutrient'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?t WHERE { { SELECT DISTINCT ?t ( COUNT ( ?g ) AS ?j ) WHERE { VALUES ( ?e ) { ( ontology:drug ) ( ontology:nutrient ) } . ?g rdf:type ?e } GROUP BY ?t } . FILTER ( ?j >= 37 ) }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q2034004 Q1949517 Q21115043
P681
Q15989253
USER
Which parts are components of those nutrients ?
(Q2034004,P681,c(Q15989253)) (Q1949517,P681,c(Q15989253)) (Q21115043,P681,c(Q15989253))
action filter_type
action find
entity prev_answer
relation P681
type Q15989253
['Q2034004', 'P681', {'concept': 'Q15989253'}] ['Q1949517', 'P681', {'concept': 'Q15989253'}] ['Q21115043', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q15989253 . VALUES ( ?i ) { ( resource:Q309513 ) ( resource:Q21115043 ) ( resource:Q1949517 ) } . ?i property:P681 ?q }
D(2) dopamine receptor 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 1A
action filter_type
action find
entity prev_answer
relation cell component
type part
['D(2) dopamine receptor', 'cell component', {'concept': 'part'}] ['5-hydroxytryptamine receptor 2A', 'cell component', {'concept': 'part'}] ['5-hydroxytryptamine receptor 1A', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:part . VALUES ( ?i ) { ( resource:Histamine_H1_receptor ) ( resource:5-hydroxytryptamine_receptor_1A ) ( resource:5-hydroxytryptamine_receptor_2A ) } . ?i property:cell_component ?q }
[]
part
Q14349455 Q14349455 Q79899
SYSTEM
cytoplasm for 3rd, membrane for 1st, 2nd
Q14349455 Q14349455 Q79899 Q14349455
(Q2034004,P681,c(Q15989253)) (Q1949517,P681,c(Q15989253)) (Q21115043,P681,c(Q15989253))
action filter_type
action find
entity prev_answer
relation P681
type Q15989253
[ANSWERS]
['Q2034004', 'P681', {'concept': 'Q15989253'}] ['Q1949517', 'P681', {'concept': 'Q15989253'}] ['Q21115043', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q15989253 . VALUES ( ?i ) { ( resource:Q309513 ) ( resource:Q21115043 ) ( resource:Q1949517 ) } . ?i property:P681 ?q }
membrane membrane cytoplasm membrane
Membrane, membrane and cytoplasm are components of those nutrients
membrane membrane cytoplasm
action filter_type
action find
entity prev_answer
relation cell component
type part
['D(2) dopamine receptor', 'cell component', {'concept': 'part'}] ['5-hydroxytryptamine receptor 2A', 'cell component', {'concept': 'part'}] ['5-hydroxytryptamine receptor 1A', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:part . VALUES ( ?i ) { ( resource:Histamine_H1_receptor ) ( resource:5-hydroxytryptamine_receptor_1A ) ( resource:5-hydroxytryptamine_receptor_2A ) } . ?i property:cell_component ?q }
[]