Simple Question (Direct)
Simple Question
Q24251659
P703
Q631147
USER
Which infraspecific name is PTS fructose transporter subunit IIA    lmo2137 found in ?
(Q24251659,P703,c(Q631147))
action filter_type
action find
entity Q24251659
relation P703
type Q631147
['Q24251659', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?u WHERE { resource:Q24251659 property:P703 ?u . ?u rdf:type ontology:Q631147 }
PTS fructose transporter subunit IIA    lmo2137
action filter_type
action find
entity PTS fructose transporter subunit IIA    lmo2137
relation found in taxon
type infraspecific name
['PTS fructose transporter subunit IIA    lmo2137', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?u WHERE { resource:PTS_fructose_transporter_subunit_IIA____lmo2137 property:found_in_taxon ?u . ?u rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102981
SYSTEM
Listeria monocytogenes EGD-e
Q21102981
(Q24251659,P703,c(Q631147))
action filter_type
action find
entity Q24251659
relation P703
type Q631147
[ANSWER]
['Q24251659', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?u WHERE { resource:Q24251659 property:P703 ?u . ?u rdf:type ontology:Q631147 }
Listeria monocytogenes EGD-e
Listeria monocytogenes EGD-e
action filter_type
action find
entity PTS fructose transporter subunit IIA    lmo2137
relation found in taxon
type infraspecific name
['PTS fructose transporter subunit IIA    lmo2137', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?u WHERE { resource:PTS_fructose_transporter_subunit_IIA____lmo2137 property:found_in_taxon ?u . ?u rdf:type ontology:infraspecific_name }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Single entity type
Q14820058
P682
Q3249551 Q181394
USER
How many processes are a biological processes that less number of nutrients are involved in than growth ?
(c(Q181394),P682,c(Q3249551))
action count
action less
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find_reverse
entity Q14820058
relation P682
type Q181394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?n ) WHERE { { SELECT DISTINCT ?g ( COUNT ( ?p ) AS ?w ) WHERE { ?g rdf:type ontology:Q3249551 . ?p rdf:type ontology:Q181394 . ?p property:P682 ?g } GROUP BY ?g } . { SELECT DISTINCT ( COUNT ( ?i ) AS ?y ) WHERE { ?i property:P682 resource:Q14820058 . ?i rdf:type ontology:Q181394 } } . FILTER ( ?w < ?y ) }
growth
action count
action less
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find_reverse
entity growth
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?n ) WHERE { { SELECT DISTINCT ?g ( COUNT ( ?p ) AS ?w ) WHERE { ?g rdf:type ontology:process . ?p rdf:type ontology:nutrient . ?p property:biological_process ?g } GROUP BY ?g } . { SELECT DISTINCT ( COUNT ( ?i ) AS ?y ) WHERE { ?i property:biological_process resource:growth . ?i rdf:type ontology:nutrient } } . FILTER ( ?w < ?y ) }
[]
process nutrient
SYSTEM
11
Q22269718 Q306383 Q22284496 Q22271548 Q9332 Q22293230 Q14873025 Q14865172 Q14885910 Q14864472 Q162925
(c(Q181394),P682,c(Q3249551))
action count
action less
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find_reverse
entity Q14820058
relation P682
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?n ) WHERE { { SELECT DISTINCT ?g ( COUNT ( ?p ) AS ?w ) WHERE { ?g rdf:type ontology:Q3249551 . ?p rdf:type ontology:Q181394 . ?p property:P682 ?g } GROUP BY ?g } . { SELECT DISTINCT ( COUNT ( ?i ) AS ?y ) WHERE { ?i property:P682 resource:Q14820058 . ?i rdf:type ontology:Q181394 } } . FILTER ( ?w < ?y ) }
locomotion G1/S transition of mitotic cell cycle biological regulation cell killing behavior developmental process cellular process signaling reproductive process rhythmic process meiotic nuclear division
11
action count
action less
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find_reverse
entity growth
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?n ) WHERE { { SELECT DISTINCT ?g ( COUNT ( ?p ) AS ?w ) WHERE { ?g rdf:type ontology:process . ?p rdf:type ontology:nutrient . ?p property:biological_process ?g } GROUP BY ?g } . { SELECT DISTINCT ( COUNT ( ?i ) AS ?y ) WHERE { ?i property:biological_process resource:growth . ?i rdf:type ontology:nutrient } } . FILTER ( ?w < ?y ) }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Single entity type|Incomplete
Q162925
P682
Q3249551 Q181394
USER
And how about meiotic nuclear division?
(c(Q181394),P682,c(Q3249551))
action count
action less
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find_reverse
entity Q162925
relation P682
type Q181394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?h ) WHERE { { SELECT DISTINCT ?w ( COUNT ( ?d ) AS ?l ) WHERE { ?d property:P682 ?w . ?w rdf:type ontology:Q3249551 . ?d rdf:type ontology:Q181394 } GROUP BY ?w } . FILTER ( ?l < ?s ) . { SELECT DISTINCT ( COUNT ( ?t ) AS ?s ) WHERE { ?t property:P682 resource:Q162925 . ?t rdf:type ontology:Q181394 } } }
meiotic nuclear division
action count
action less
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find_reverse
entity meiotic nuclear division
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?h ) WHERE { { SELECT DISTINCT ?w ( COUNT ( ?d ) AS ?l ) WHERE { ?d property:biological_process ?w . ?w rdf:type ontology:process . ?d rdf:type ontology:nutrient } GROUP BY ?w } . FILTER ( ?l < ?s ) . { SELECT DISTINCT ( COUNT ( ?t ) AS ?s ) WHERE { ?t property:biological_process resource:meiotic_nuclear_division . ?t rdf:type ontology:nutrient } } }
[]
process nutrient
SYSTEM
8
Q22269718 Q22284496 Q22271548 Q9332 Q22293230 Q14873025 Q14865172 Q14885910
(c(Q181394),P682,c(Q3249551))
action count
action less
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find_reverse
entity Q162925
relation P682
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?h ) WHERE { { SELECT DISTINCT ?w ( COUNT ( ?d ) AS ?l ) WHERE { ?d property:P682 ?w . ?w rdf:type ontology:Q3249551 . ?d rdf:type ontology:Q181394 } GROUP BY ?w } . FILTER ( ?l < ?s ) . { SELECT DISTINCT ( COUNT ( ?t ) AS ?s ) WHERE { ?t property:P682 resource:Q162925 . ?t rdf:type ontology:Q181394 } } }
locomotion biological regulation cell killing behavior developmental process cellular process signaling reproductive process
8
action count
action less
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find_reverse
entity meiotic nuclear division
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?h ) WHERE { { SELECT DISTINCT ?w ( COUNT ( ?d ) AS ?l ) WHERE { ?d property:biological_process ?w . ?w rdf:type ontology:process . ?d rdf:type ontology:nutrient } GROUP BY ?w } . FILTER ( ?l < ?s ) . { SELECT DISTINCT ( COUNT ( ?t ) AS ?s ) WHERE { ?t property:biological_process resource:meiotic_nuclear_division . ?t rdf:type ontology:nutrient } } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24251659
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by PTS fructose transporter subunit IIA    lmo2137 ?
(c(Q863908),P688,Q24251659)
action filter_type
action find_reverse
entity Q24251659
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24251659']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q24251659 . ?t rdf:type ontology:Q863908 }
PTS fructose transporter subunit IIA    lmo2137
action filter_type
action find_reverse
entity PTS fructose transporter subunit IIA    lmo2137
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'PTS fructose transporter subunit IIA    lmo2137']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:PTS_fructose_transporter_subunit_IIA____lmo2137 . ?t rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23232899
SYSTEM
PTS fructose transporter subunit IIA    lmo2137
Q23232899
(c(Q863908),P688,Q24251659)
action filter_type
action find_reverse
entity Q24251659
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q24251659']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q24251659 . ?t rdf:type ontology:Q863908 }
PTS fructose transporter subunit IIA    lmo2137
PTS fructose transporter subunit IIA    lmo2137
action filter_type
action find_reverse
entity PTS fructose transporter subunit IIA    lmo2137
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'PTS fructose transporter subunit IIA    lmo2137']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:PTS_fructose_transporter_subunit_IIA____lmo2137 . ?t rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24251659
P702
Q863908
USER
Which gene encodes that nutrient ?
(Q23232899,P702,c(Q863908))
action filter_type
action find
entity Q24251659
relation P702
type Q863908
['Q23232899', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?q WHERE { resource:Q24251659 property:P702 ?q . ?q rdf:type ontology:Q863908 }
PTS fructose transporter subunit IIA    lmo2137
action filter_type
action find
entity PTS fructose transporter subunit IIA    lmo2137
relation encoded by
type nucleic acid sequence
['PTS fructose transporter subunit IIA    lmo2137', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?q WHERE { resource:PTS_fructose_transporter_subunit_IIA____lmo2137 property:encoded_by ?q . ?q rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23232899
SYSTEM
PTS fructose transporter subunit IIA    lmo2137
Q23232899
(Q23232899,P702,c(Q863908))
action filter_type
action find
entity Q24251659
relation P702
type Q863908
[ANSWER]
['Q23232899', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?q WHERE { resource:Q24251659 property:P702 ?q . ?q rdf:type ontology:Q863908 }
PTS fructose transporter subunit IIA    lmo2137
PTS fructose transporter subunit IIA    lmo2137
action filter_type
action find
entity PTS fructose transporter subunit IIA    lmo2137
relation encoded by
type nucleic acid sequence
['PTS fructose transporter subunit IIA    lmo2137', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?q WHERE { resource:PTS_fructose_transporter_subunit_IIA____lmo2137 property:encoded_by ?q . ?q rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q23232899 Q23626377
P702
Q181394
USER
Is hypothetical protein    PSPTO_1932 the gene that is encoded by that nucleic acid sequence ?
(Q23626377,P702,Q23232899)
action is_in
entity Q23626377
action find
entity Q23232899
relation P702
['Q23626377', 'P702', 'Q23232899']
ASK WHERE { resource:Q23232899 property:P702 resource:Q23626377 }
PTS fructose transporter subunit IIA    lmo2137 hypothetical protein    PSPTO_1932
action is_in
entity hypothetical protein    PSPTO_1932
action find
entity PTS fructose transporter subunit IIA    lmo2137
relation encoded by
['hypothetical protein    PSPTO_1932', 'encoded by', 'PTS fructose transporter subunit IIA    lmo2137']
ASK WHERE { resource:PTS_fructose_transporter_subunit_IIA____lmo2137 property:encoded_by resource:hypothetical_protein____PSPTO_1932 }
[]
nutrient
SYSTEM
NO
(Q23626377,P702,Q23232899)
action is_in
entity Q23626377
action find
entity Q23232899
relation P702
[ANSWER]
['Q23626377', 'P702', 'Q23232899']
ASK WHERE { resource:Q23232899 property:P702 resource:Q23626377 }
No
action is_in
entity hypothetical protein    PSPTO_1932
action find
entity PTS fructose transporter subunit IIA    lmo2137
relation encoded by
['hypothetical protein    PSPTO_1932', 'encoded by', 'PTS fructose transporter subunit IIA    lmo2137']
ASK WHERE { resource:PTS_fructose_transporter_subunit_IIA____lmo2137 property:encoded_by resource:hypothetical_protein____PSPTO_1932 }
[]