Simple Question (Direct)
Simple Question
Q21173996
P702
Q863908
USER
Which gene encodes Synaptonemal complex protein 2 ?
(Q21173996,P702,c(Q863908))
action filter_type
action find
entity Q21173996
relation P702
type Q863908
['Q21173996', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q863908 . resource:Q21173996 property:P702 ?g }
Synaptonemal complex protein 2
action filter_type
action find
entity Synaptonemal complex protein 2
relation encoded by
type nucleic acid sequence
['Synaptonemal complex protein 2', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:nucleic_acid_sequence . resource:Synaptonemal_complex_protein_2 property:encoded_by ?g }
[]
nucleic acid sequence
Q18035343
SYSTEM
SYCP2
Q18035343
(Q21173996,P702,c(Q863908))
action filter_type
action find
entity Q21173996
relation P702
type Q863908
[ANSWER] encodes Synaptonemal complex protein 2
['Q21173996', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q863908 . resource:Q21173996 property:P702 ?g }
SYCP2
SYCP2 encodes Synaptonemal complex protein 2
SYCP2
action filter_type
action find
entity Synaptonemal complex protein 2
relation encoded by
type nucleic acid sequence
['Synaptonemal complex protein 2', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:nucleic_acid_sequence . resource:Synaptonemal_complex_protein_2 property:encoded_by ?g }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21173996
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q18035343)
action filter_type
action find_reverse
entity Q21173996
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q18035343']
SELECT DISTINCT ?i WHERE { ?i property:P688 resource:Q21173996 . ?i rdf:type ontology:Q863908 }
Synaptonemal complex protein 2
action filter_type
action find_reverse
entity Synaptonemal complex protein 2
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'SYCP2']
SELECT DISTINCT ?i WHERE { ?i property:encodes resource:Synaptonemal_complex_protein_2 . ?i rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18035343
SYSTEM
SYCP2
Q18035343
(c(Q863908),P688,Q18035343)
action filter_type
action find_reverse
entity Q21173996
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q18035343']
SELECT DISTINCT ?i WHERE { ?i property:P688 resource:Q21173996 . ?i rdf:type ontology:Q863908 }
SYCP2
SYCP2 encodes that nutrient
SYCP2
action filter_type
action find_reverse
entity Synaptonemal complex protein 2
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'SYCP2']
SELECT DISTINCT ?i WHERE { ?i property:encodes resource:Synaptonemal_complex_protein_2 . ?i rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18035343
P684
Q863908
USER
What is the name of the species that has that one as its orthologous gene ?
(c(Q863908),P684,Q18035343)
action filter_type
action find
entity Q18035343
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18035343']
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q863908 . resource:Q18035343 property:P684 ?m }
SYCP2
action filter_type
action find
entity SYCP2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'SYCP2']
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:nucleic_acid_sequence . resource:SYCP2 property:ortholog ?m }
[]
nucleic acid sequence
Q18302098
SYSTEM
Sycp2
Q18302098
(c(Q863908),P684,Q18035343)
action filter_type
action find
entity Q18035343
relation P684
type Q863908
The name of the species that has that one as its orthologous gene is the [ANSWER]
[{'concept': 'Q863908'}, 'P684', 'Q18035343']
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q863908 . resource:Q18035343 property:P684 ?m }
Sycp2
The name of the species that has that one as its orthologous gene is the Sycp2
Sycp2
action filter_type
action find
entity SYCP2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'SYCP2']
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:nucleic_acid_sequence . resource:SYCP2 property:ortholog ?m }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18035343
P703
Q16521
USER
Which taxon is SYCP2 found in ?
(Q18035343,P703,c(Q16521))
action filter_type
action find
entity Q18035343
relation P703
type Q16521
['Q18035343', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q16521 . resource:Q18035343 property:P703 ?t }
SYCP2
action filter_type
action find
entity SYCP2
relation found in taxon
type taxon
['SYCP2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:taxon . resource:SYCP2 property:found_in_taxon ?t }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q18035343,P703,c(Q16521))
action filter_type
action find
entity Q18035343
relation P703
type Q16521
SYCP2 is found in [ANSWER]
['Q18035343', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:Q16521 . resource:Q18035343 property:P703 ?t }
Homo sapiens
SYCP2 is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity SYCP2
relation found in taxon
type taxon
['SYCP2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?t WHERE { ?t rdf:type ontology:taxon . resource:SYCP2 property:found_in_taxon ?t }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23364944
Q16521
USER
And what about sporulation initiation phosphotransferase F    RB4760?
(Q23364944,P703,c(Q16521))
action filter_type
action find
entity Q23364944
relation P703
type Q16521
['Q23364944', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?y WHERE { resource:Q23364944 property:P703 ?y . ?y rdf:type ontology:Q16521 }
sporulation initiation phosphotransferase F    RB4760
action filter_type
action find
entity sporulation initiation phosphotransferase F    RB4760
relation found in taxon
type taxon
['sporulation initiation phosphotransferase F    RB4760', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?y WHERE { resource:sporulation_initiation_phosphotransferase_F____RB4760 property:found_in_taxon ?y . ?y rdf:type ontology:taxon }
[]
taxon
Q21398466
SYSTEM
Rhodopirellula baltica SH 1
Q21398466
(Q23364944,P703,c(Q16521))
action filter_type
action find
entity Q23364944
relation P703
type Q16521
[ANSWER]
['Q23364944', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?y WHERE { resource:Q23364944 property:P703 ?y . ?y rdf:type ontology:Q16521 }
Rhodopirellula baltica SH 1
Rhodopirellula baltica SH 1
action filter_type
action find
entity sporulation initiation phosphotransferase F    RB4760
relation found in taxon
type taxon
['sporulation initiation phosphotransferase F    RB4760', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?y WHERE { resource:sporulation_initiation_phosphotransferase_F____RB4760 property:found_in_taxon ?y . ?y rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q21398466 Q24396345
P703
Q863908
USER
Is LOC100912317 found in that taxon ?
(Q24396345,P703,Q21398466)
action is_in
entity Q24396345
action find
entity Q21398466
relation P703
['Q24396345', 'P703', 'Q21398466']
ASK WHERE { resource:Q21398466 property:P703 resource:Q24396345 }
Rhodopirellula baltica SH 1 LOC100912317
action is_in
entity LOC100912317
action find
entity Rhodopirellula baltica SH 1
relation found in taxon
['LOC100912317', 'found in taxon', 'Rhodopirellula baltica SH 1']
ASK WHERE { resource:Rhodopirellula_baltica_SH_1 property:found_in_taxon resource:LOC100912317 }
[]
nucleic acid sequence
SYSTEM
NO
(Q24396345,P703,Q21398466)
action is_in
entity Q24396345
action find
entity Q21398466
relation P703
[ANSWER]
['Q24396345', 'P703', 'Q21398466']
ASK WHERE { resource:Q21398466 property:P703 resource:Q24396345 }
No
action is_in
entity LOC100912317
action find
entity Rhodopirellula baltica SH 1
relation found in taxon
['LOC100912317', 'found in taxon', 'Rhodopirellula baltica SH 1']
ASK WHERE { resource:Rhodopirellula_baltica_SH_1 property:found_in_taxon resource:LOC100912317 }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q18302098 Q21990672
P688
Q181394
USER
Is Synaptonemal complex protein 2 encoded by Sycp2 ?
(Q18302098,P688,Q21990672)
action is_in
entity Q21990672
action find
entity Q18302098
relation P688
['Q18302098', 'P688', 'Q21990672']
ASK WHERE { resource:Q18302098 property:P688 resource:Q21990672 }
Sycp2 Synaptonemal complex protein 2
action is_in
entity Synaptonemal complex protein 2
action find
entity Sycp2
relation encodes
['Sycp2', 'encodes', 'Synaptonemal complex protein 2']
ASK WHERE { resource:Sycp2 property:encodes resource:Synaptonemal_complex_protein_2 }
[]
nutrient
SYSTEM
YES
(Q18302098,P688,Q21990672)
action is_in
entity Q21990672
action find
entity Q18302098
relation P688
[ANSWER]
['Q18302098', 'P688', 'Q21990672']
ASK WHERE { resource:Q18302098 property:P688 resource:Q21990672 }
Yes
action is_in
entity Synaptonemal complex protein 2
action find
entity Sycp2
relation encodes
['Sycp2', 'encodes', 'Synaptonemal complex protein 2']
ASK WHERE { resource:Sycp2 property:encodes resource:Synaptonemal_complex_protein_2 }
[]