Simple Question (Direct)
Simple Question
Q21989372
P682
Q3249551
USER
Which process is Phosducin involved in ?
(Q21989372,P682,c(Q3249551))
action filter_type
action find
entity Q21989372
relation P682
type Q3249551
['Q21989372', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?s WHERE { resource:Q21989372 property:P682 ?s . ?s rdf:type ontology:Q3249551 }
Phosducin
action filter_type
action find
entity Phosducin
relation biological process
type process
['Phosducin', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?s WHERE { resource:Phosducin property:biological_process ?s . ?s rdf:type ontology:process }
[]
process
Q14859560
SYSTEM
response to stimulus
Q14859560
(Q21989372,P682,c(Q3249551))
action filter_type
action find
entity Q21989372
relation P682
type Q3249551
Phosducin is the [ANSWER]
['Q21989372', 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?s WHERE { resource:Q21989372 property:P682 ?s . ?s rdf:type ontology:Q3249551 }
response to stimulus
Phosducin is the response to stimulus
response to stimulus
action filter_type
action find
entity Phosducin
relation biological process
type process
['Phosducin', 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?s WHERE { resource:Phosducin property:biological_process ?s . ?s rdf:type ontology:process }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21989372
P681
Q15989253
USER
Which parts are the components of that nutrient ?
(Q14859560,P681,c(Q15989253))
action filter_type
action find
entity Q21989372
relation P681
type Q15989253
['Q14859560', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q15989253 . resource:Q21989372 property:P681 ?o }
Phosducin
action filter_type
action find
entity Phosducin
relation cell component
type part
['response to stimulus', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:part . resource:Phosducin property:cell_component ?o }
[]
part
Q79899 Q40260
SYSTEM
cytoplasm, nucleus
Q79899 Q40260
(Q14859560,P681,c(Q15989253))
action filter_type
action find
entity Q21989372
relation P681
type Q15989253
[ANSWERS] are the components of that nutrient
['Q14859560', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q15989253 . resource:Q21989372 property:P681 ?o }
cytoplasm nucleus
Cytoplasm and nucleus are the components of that nutrient
cytoplasm nucleus
action filter_type
action find
entity Phosducin
relation cell component
type part
['response to stimulus', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:part . resource:Phosducin property:cell_component ?o }
[]
Clarification
Quantitative|Count|Logical operators|Indirect
P361
Q11173 Q20011319
USER
How many chemical compounds or parts of a plant are a component of that part ?
(c(Q11173),P361,Q79899) (c(Q20011319),P361,Q79899) (c(Q11173),P361,Q79899) (c(Q20011319),P361,Q79899) (c(Q11173),P361,Q40260) (c(Q20011319),P361,Q40260)
[{'concept': 'Q11173'}, 'P361', 'Q79899'] [{'concept': 'Q20011319'}, 'P361', 'Q79899'] [{'concept': 'Q11173'}, 'P361', 'Q79899'] [{'concept': 'Q20011319'}, 'P361', 'Q79899'] [{'concept': 'Q11173'}, 'P361', 'Q40260'] [{'concept': 'Q20011319'}, 'P361', 'Q40260']
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P361 resource:Q79899 } UNION { ?y property:P361 resource:Q79899 } UNION { ?z property:P361 resource:Q79899 } UNION { ?y property:P361 resource:Q79899 } UNION { ?z property:P361 resource:Q40260 } UNION { ?y property:P361 resource:Q40260 } } . ?z rdf:type ontology:Q11173 . ?y rdf:type ontology:Q20011319 }
[{'concept': 'chemical compound'}, 'part of', 'cytoplasm'] [{'concept': 'part of a plant'}, 'part of', 'cytoplasm'] [{'concept': 'chemical compound'}, 'part of', 'cytoplasm'] [{'concept': 'part of a plant'}, 'part of', 'cytoplasm'] [{'concept': 'chemical compound'}, 'part of', 'nucleus'] [{'concept': 'part of a plant'}, 'part of', 'nucleus']
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:part_of resource:cytoplasm } UNION { ?y property:part_of resource:cytoplasm } UNION { ?z property:part_of resource:cytoplasm } UNION { ?y property:part_of resource:cytoplasm } UNION { ?z property:part_of resource:nucleus } UNION { ?y property:part_of resource:nucleus } } . ?z rdf:type ontology:chemical_compound . ?y rdf:type ontology:part_of_a_plant }
[]
chemical compound part of a plant
Quantitative|Count|Mult. entity type|Clarification
Q79899
SYSTEM
Did you mean cytoplasm ?
[ANSWER]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P361 resource:Q79899 } UNION { ?y property:P361 resource:Q79899 } UNION { ?z property:P361 resource:Q79899 } UNION { ?y property:P361 resource:Q79899 } UNION { ?z property:P361 resource:Q40260 } UNION { ?y property:P361 resource:Q40260 } } . ?z rdf:type ontology:Q11173 . ?y rdf:type ontology:Q20011319 }
Did you mean cytoplasm ?
cytoplasm
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:part_of resource:cytoplasm } UNION { ?y property:part_of resource:cytoplasm } UNION { ?z property:part_of resource:cytoplasm } UNION { ?y property:part_of resource:cytoplasm } UNION { ?z property:part_of resource:nucleus } UNION { ?y property:part_of resource:nucleus } } . ?z rdf:type ontology:chemical_compound . ?y rdf:type ontology:part_of_a_plant }
[]
Quantitative Reasoning (Count) (All)
USER
Yes
(c(Q11173),P361,Q79899) (c(Q20011319),P361,Q79899) (c(Q11173),P361,Q79899) (c(Q20011319),P361,Q79899) (c(Q11173),P361,Q40260) (c(Q20011319),P361,Q40260)
[{'concept': 'Q11173'}, 'P361', 'Q79899'] [{'concept': 'Q20011319'}, 'P361', 'Q79899'] [{'concept': 'Q11173'}, 'P361', 'Q79899'] [{'concept': 'Q20011319'}, 'P361', 'Q79899'] [{'concept': 'Q11173'}, 'P361', 'Q40260'] [{'concept': 'Q20011319'}, 'P361', 'Q40260']
[{'concept': 'chemical compound'}, 'part of', 'cytoplasm'] [{'concept': 'part of a plant'}, 'part of', 'cytoplasm'] [{'concept': 'chemical compound'}, 'part of', 'cytoplasm'] [{'concept': 'part of a plant'}, 'part of', 'cytoplasm'] [{'concept': 'chemical compound'}, 'part of', 'nucleus'] [{'concept': 'part of a plant'}, 'part of', 'nucleus']
[]
SYSTEM
2
Q22329458 Q21762011
(c(Q11173),P361,Q79899) (c(Q20011319),P361,Q79899) (c(Q11173),P361,Q79899) (c(Q20011319),P361,Q79899) (c(Q11173),P361,Q40260) (c(Q20011319),P361,Q40260)
[ANSWER]
[{'concept': 'Q11173'}, 'P361', 'Q79899'] [{'concept': 'Q20011319'}, 'P361', 'Q79899'] [{'concept': 'Q11173'}, 'P361', 'Q79899'] [{'concept': 'Q20011319'}, 'P361', 'Q79899'] [{'concept': 'Q11173'}, 'P361', 'Q40260'] [{'concept': 'Q20011319'}, 'P361', 'Q40260']
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P361 resource:Q79899 } UNION { ?y property:P361 resource:Q79899 } UNION { ?z property:P361 resource:Q79899 } UNION { ?y property:P361 resource:Q79899 } UNION { ?z property:P361 resource:Q40260 } UNION { ?y property:P361 resource:Q40260 } } . ?z rdf:type ontology:Q11173 . ?y rdf:type ontology:Q20011319 }
cytoplasmic region cytoplasmic nucleosome
2
[{'concept': 'chemical compound'}, 'part of', 'cytoplasm'] [{'concept': 'part of a plant'}, 'part of', 'cytoplasm'] [{'concept': 'chemical compound'}, 'part of', 'cytoplasm'] [{'concept': 'part of a plant'}, 'part of', 'cytoplasm'] [{'concept': 'chemical compound'}, 'part of', 'nucleus'] [{'concept': 'part of a plant'}, 'part of', 'nucleus']
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:part_of resource:cytoplasm } UNION { ?y property:part_of resource:cytoplasm } UNION { ?z property:part_of resource:cytoplasm } UNION { ?y property:part_of resource:cytoplasm } UNION { ?z property:part_of resource:nucleus } UNION { ?y property:part_of resource:nucleus } } . ?z rdf:type ontology:chemical_compound . ?y rdf:type ontology:part_of_a_plant }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q14633862 Q40260
P680 P681
Q181394
USER
Which nutrients are nucleus a cell component of and have calcium ion binding as their molecular function ?
AND((c(Q181394),P681,Q40260), (c(Q181394),P680,Q14633862))
action filter_type
action intersection
action find_reverse
entity Q40260
relation P681
action find_reverse
entity Q14633862
relation P680
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P681', 'Q40260'], [{'concept': 'Q181394'}, 'P680', 'Q14633862']]}
SELECT DISTINCT ?s WHERE { ?s property:P681 resource:Q40260 . ?s property:P680 resource:Q14633862 . ?s rdf:type ontology:Q181394 }
calcium ion binding nucleus
action filter_type
action intersection
action find_reverse
entity nucleus
relation cell component
action find_reverse
entity calcium ion binding
relation molecular function
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'cell component', 'nucleus'], [{'concept': 'nutrient'}, 'molecular function', 'calcium ion binding']]}
SELECT DISTINCT ?s WHERE { ?s property:cell_component resource:nucleus . ?s property:molecular_function resource:calcium_ion_binding . ?s rdf:type ontology:nutrient }
[]
nutrient
Q21133183 Q21171751 Q21116494 Q21154929 Q21115711 Q21137538 Q21131099 Q21115585 Q21498333 Q4044985
SYSTEM
Some of them are Calcium/calmodulin-dependent protein kinase kinase 2, Calcyphosin, 78 kDa glucose-regulated protein, Annexin A6, Copine-1, Calcyphosin, Annexin A7, Calpain-2 catalytic subunit, EF-hand calcium-binding domain-containing protein 6, Neurogenic locus notch homolog protein 1
Q21112089 Q21113236 Q21124919 Q21121134 Q4769148 Q21985870 Q21114269 Q21108226 Q21116927 Q14908074 Q21494920 Q21123333 Q21494929 Q14908226 Q288591 Q21981320 Q21108519 Q21981326 Q21120153 Q21114503 Q21130721 Q21986270 Q21114077 Q21494226 Q21494225 Q21496161 Q21126494 Q7309567 Q21498191 Q21131370 Q21110189 Q21116494 Q21201832 Q21115672 Q21134270 Q21173216 Q21495659 Q21171227 Q21114260 Q21981256 Q21991094 Q21980010 Q21109469 Q21987814 Q21981704 Q21985779 Q27552240 Q422360 Q21494334 Q21125127 Q21124891 Q21130004 Q21981252 Q21102026 Q27551329 Q14916170 Q21990436 Q21116697 Q21130000 Q21493994 Q21111765 Q7455513 Q21981266 Q5023949 Q21122014 Q21987821 Q21132160 Q21109242 Q4392325 Q21114487 Q21986743 Q21986749 Q21495983 Q21114154 Q21124898 Q21137466 Q21986742 Q21986745 Q21986747 Q21986746 Q21114543 Q21107266 Q22679303 Q21157872 Q21983415 Q21117351 Q7062526 Q3098700 Q21141219 Q21114092 Q21983821 Q5023958 Q21132155 Q21137176 Q21435796 Q21985227 Q21124358 Q21988879 Q21123679 Q21123449 Q21986593 Q21113647 Q21986752 Q21494844 Q21986751 Q21494842 Q21494843 Q21096417 Q21135055 Q4044985 Q21109701 Q21980349 Q14906164 Q21991625 Q5319588 Q21173306 Q21130033 Q21118735 Q21140551 Q21990371 Q14862284 Q21172941 Q21131887 Q21108021 Q21991519 Q21111869 Q21110142 Q21110143 Q21986192 Q21986193 Q21123762 Q21124835 Q21494218 Q21123768 Q21115711 Q21986290 Q21124404 Q21154929 Q14912604 Q21119941 Q27552635 Q21123689 Q21130756 Q21115585 Q21171522 Q14908237 Q21987912 Q21111929 Q27547363 Q14633944 Q21111928 Q21112734 Q22676971 Q21991762 Q21110137 Q21115621 Q21116422 Q21986281 Q21986282 Q21124827 Q14906145 Q1487359 Q2851537 Q21118753 Q21494948 Q21494946 Q21111528 Q2851539 Q21133136 Q21984382 Q21987775 Q21987774 Q21174697 Q21984221 Q634510 Q21494784 Q15321300 Q21137538 Q21495976 Q21498331 Q21497189 Q21133183 Q21107536 Q21491080 Q21498333 Q21982911 Q21124426 Q21122177 Q21494259 Q21987956 Q21494952 Q21418629 Q21131099 Q22676983 Q21111739 Q21123180 Q74314 Q21171751 Q21109218 Q21096355 Q21134492 Q21115897
AND((c(Q181394),P681,Q40260), (c(Q181394),P680,Q14633862))
action filter_type
action intersection
action find_reverse
entity Q40260
relation P681
action find_reverse
entity Q14633862
relation P680
type Q181394
[ANSWERS]
{'AND': [[{'concept': 'Q181394'}, 'P681', 'Q40260'], [{'concept': 'Q181394'}, 'P680', 'Q14633862']]}
SELECT DISTINCT ?s WHERE { ?s property:P681 resource:Q40260 . ?s property:P680 resource:Q14633862 . ?s rdf:type ontology:Q181394 }
Programmed cell death protein 6 EF-hand calcium-binding domain-containing protein 6 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1 Protocadherin alpha-2 Annexin A1 N-terminal EF-hand calcium-binding protein 1 Deoxyribonuclease-1-like 2 E3 ubiquitin-protein ligase CBL-B Calcium-binding tyrosine phosphorylation-regulated protein Calretinin Calbindin Parvalbumin alpha Calmodulin Annexin A1 Alpha-synuclein Epidermal growth factor receptor substrate 15-like 1 Protein S100-P Prolow-density lipoprotein receptor-related protein 1 Nucleobindin-1 Filaggrin-2 Phospholipid scramblase 1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 Centrin-3 Calcineurin B homologous protein 3 Calcineurin B homologous protein 2 Cyclin-dependent kinase 5 activator 1 Tandem C2 domains nuclear protein Regucalcin Calsyntenin-1 Endoplasmin Epidermal growth factor receptor substrate 15-like 1 78 kDa glucose-regulated protein Filaggrin Calcium and integrin-binding protein 1 Phospholipid scramblase 2 Maternal embryonic leucine zipper kinase Protocadherin Fat 2 Protein S100-A1 Deoxyribonuclease gamma Centrin-2 Serum amyloid P-component Calcium uptake protein 2, mitochondrial Protein S100-A4 Protein-arginine deiminase type-6 Protein S100-A6 Methylated-DNA--protein-cysteine methyltransferase translation elongation factor EF1B gamma YPL048W SPARC Calsenilin Protein S100-A5 Neurogenic locus notch homolog protein 2 Annexin A11 Centrin-3 Protein S100-A9 Pan1p YIR006C GTP cyclohydrolase 1 Programmed cell death protein 6 Protein kinase C-binding protein NELL1 Annexin A4 Serine/threonine-protein kinase B-raf C2 calcium-dependent domain-containing protein 4A Serum amyloid P-component Calcium and integrin-binding protein 1 Calretinin Protein S100-A13 Protein-arginine deiminase type-4 Nucleolar protein 3 Carbamoyl-phosphate synthase [ammonia], mitochondrial Runt-related transcription factor 1 Protocadherin Fat 2 Protein S100-A8 Protein S100-A1 Maternal embryonic leucine zipper kinase 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 Neurogenic locus notch homolog protein 4 Phosphoinositide phospholipase C Protein S100-A4 Protein S100-A9 Protein S100-A11 Protein S100-B Protein S100-A8 Protocadherin Fat 1 Calpain-3 Dentin matrix acidic phosphoprotein 1 Calcium/calmodulin-dependent protein kinase kinase 2 Calsyntenin-1 Neurogenic locus notch homolog protein 3 Gelsolin Allograft inflammatory factor 1 isoform 3 Centrin-2 Carbamoyl-phosphate synthase [ammonia], mitochondrial Calsenilin Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform Parvalbumin, isoform CRA_a Oncomodulin Phospholipid scramblase 1 Protein S100-A7 Oncoprotein-induced transcript 3 protein Protein-arginine deiminase type-6 Switch-associated protein 70 Protein kinase C-binding protein NELL1 RNA-binding protein MEX3B Protein S100-A13 Annexin A7 Protein S100-A5 Annexin A11 Annexin A4 Ras GTPase-activating-like protein IQGAP1 Secretagogin Neurogenic locus notch homolog protein 1 Cyclin-dependent kinase 5 activator 1 Calpain-2 catalytic subunit SPARC Secretagogin Dystroglycan Dystonin Translationally-controlled tumor protein Methylated-DNA--protein-cysteine methyltransferase 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 Neurogenic locus notch homolog protein 4 Alpha-synuclein Allograft inflammatory factor 1 Calcineurin B homologous protein 1 Protein S100-B Tandem C2 domains nuclear protein Calmodulin-like protein 6 EH domain-containing protein 3 EH domain-containing protein 2 Neurogenic locus notch homolog protein 2 Neurogenic locus notch homolog protein 1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 N-terminal EF-hand calcium-binding protein 3 Calcineurin B homologous protein 1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 Copine-1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 Protein S100-A12 Annexin A6 Neurogenic locus notch homolog protein 3 Arachidonate 15-lipoxygenase B Pef1p YGR058W Protein-arginine deiminase type-4 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta Calpain-2 catalytic subunit E3 ubiquitin-protein ligase CBL Annexin A2 Parvalbumin alpha Calcineurin B homologous protein 3 centrin YOR257W Calreticulin Calcineurin B homologous protein 2 Multiple epidermal growth factor-like domains protein 8 Calbindin Titin EH domain-containing protein 4 E3 ubiquitin-protein ligase CBL-C EF-hand calcium-binding domain-containing protein 4B 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1 N-terminal EF-hand calcium-binding protein 1 Dystroglycan GTP cyclohydrolase 1 Annexin A2 Calcium uptake protein 2, mitochondrial E3 ubiquitin-protein ligase CBL-B E3 ubiquitin-protein ligase CBL Prolow-density lipoprotein receptor-related protein 1 Annexin A5 Hornerin Calcium-binding tyrosine phosphorylation-regulated protein Nucleobindin-2 Translationally-controlled tumor protein Cytosolic phospholipase A2 Dystonin Calreticulin Allograft inflammatory factor 1 Extracellular calcium-sensing receptor Calcyphosin Multiple epidermal growth factor-like domains protein 8 EF-hand calcium-binding domain-containing protein 4B Calpain-3 Calcium/calmodulin-dependent protein kinase kinase 2 Nucleobindin-2 Alpha-actinin-4 EF-hand calcium-binding domain-containing protein 6 Delta-like protein 1 Protein S100-A16 Teneurin-2 Copine-1 Regucalcin E3 ubiquitin-protein ligase CBL-C Gelsolin Annexin A7 Calmodulin C2 calcium-dependent domain-containing protein 4B Oncoprotein-induced transcript 3 protein Titin Calcyphosin Serine/threonine-protein kinase B-raf Alpha-actinin-4 Protein S100-A11 Protein S100-A6
Calcium/calmodulin-dependent protein kinase 2, Calcyphosin, 78 kDa glucose-regulated protein, Annexin A6, Copine-1, Calcyphosin, Annexin A7, Calpain-2 catalytic subunit, EF-hand calcium-binding domain-containing protein 6 and Neurogenic locus notch homolog protein 1 are nucleus a cell component of and have calcium ion binding as their molecular function
Calcium/calmodulin-dependent protein kinase kinase 2 Calcyphosin 78 kDa glucose-regulated protein Annexin A6 Copine-1 Calcyphosin Annexin A7 Calpain-2 catalytic subunit EF-hand calcium-binding domain-containing protein 6 Neurogenic locus notch homolog protein 1
action filter_type
action intersection
action find_reverse
entity nucleus
relation cell component
action find_reverse
entity calcium ion binding
relation molecular function
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'cell component', 'nucleus'], [{'concept': 'nutrient'}, 'molecular function', 'calcium ion binding']]}
SELECT DISTINCT ?s WHERE { ?s property:cell_component resource:nucleus . ?s property:molecular_function resource:calcium_ion_binding . ?s rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q2996394 Q181394
USER
Which biological processes are a biological processes that atmost 1899 nutrients are involved in ?
(c(Q181394),P682,c(Q2996394))
action atmost
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
value 1899
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ?g ( COUNT ( ?e ) AS ?p ) WHERE { ?g rdf:type ontology:Q2996394 . ?e rdf:type ontology:Q181394 . ?e property:P682 ?g } GROUP BY ?g } . FILTER ( ?p <= 1899 ) }
action atmost
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
value 1899
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ?g ( COUNT ( ?e ) AS ?p ) WHERE { ?g rdf:type ontology:biological_process . ?e rdf:type ontology:nutrient . ?e property:biological_process ?g } GROUP BY ?g } . FILTER ( ?p <= 1899 ) }
[]
biological process nutrient
Q14877671 Q21750263 Q21108938
SYSTEM
cartilage condensation, FtsZ-dependent cytokinesis, preantral ovarian follicle growth
Q22294591 Q21172195 Q14862258 Q21107328 Q22295734 Q14860201 Q288322 Q14902079 Q14863388 Q14904219 Q14911711 Q22271492 Q22271494 Q14864899 Q22294585 Q21122953 Q21104659 Q14860196 Q22294349 Q14860198 Q14864005 Q15325345 Q22269626 Q22269531 Q847556 Q24459941 Q21438150 Q14897640 Q208353 Q21114926 Q14865609 Q21116174 Q14876119 Q14877671 Q22272257 Q21097540 Q14864099 Q21103041 Q21444598 Q21136671 Q21111890 Q22253821 Q21101822 Q14863654 Q21109007 Q22271536 Q22279989 Q21127160 Q14865397 Q15314382 Q14859996 Q14865659 Q14914558 Q22294730 Q21171796 Q14331109 Q21149516 Q187640 Q21130714 Q2663023 Q21120908 Q189159 Q22271501 Q14818032 Q22281166 Q22299432 Q14908045 Q14863467 Q21105147 Q21123910 Q15320925 Q163261 Q1612119 Q22298156 Q22271697 Q22269715 Q21119405 Q22297692 Q21130764 Q21750263 Q21762806 Q333666 Q21418091 Q14864443 Q14820875 Q21124921 Q21106668 Q14904764 Q21104990 Q14863664 Q22250139 Q14863667 Q21108563 Q21111494 Q14914540 Q17304930 Q21758676 Q22284328 Q21108938 Q21106266 Q14864210 Q14907898 Q21106018 Q22271479 Q22272219 Q14904772 Q14904771 Q14819471 Q14912956 Q21108839 Q22279704 Q14863453 Q14882364 Q14819856 Q21104832 Q21102309 Q22289134 Q14863538 Q14819911 Q22269699 Q14599729 Q22284230 Q14851921 Q21115753 Q24459846 Q22274350 Q21115817 Q14876924 Q14864904 Q14645719 Q14873676 Q21104842 Q21132115 Q21114820
(c(Q181394),P682,c(Q2996394))
action atmost
action find_reverse_tuple_counts
relation P682
type Q2996394
type Q181394
value 1899
[ANSWERS] are a biological processes that atmost 1899 nutrients are involved in
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ?g ( COUNT ( ?e ) AS ?p ) WHERE { ?g rdf:type ontology:Q2996394 . ?e rdf:type ontology:Q181394 . ?e property:P682 ?g } GROUP BY ?g } . FILTER ( ?p <= 1899 ) }
mitotic cell cycle arrest in response to pheromone positive regulation of growth factor dependent skeletal muscle satellite cell proliferation dopamine uptake involved in synaptic transmission development involved in symbiotic interaction leukocyte activation anatomical structure development autophagy T cell mediated cytotoxicity response to external stimulus developmental process involved in reproduction male meiosis detoxification of zinc ion detoxification of arsenic-containing substance acrosome matrix dispersal adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion male pronucleus assembly detoxification of nitrogen compound developmental growth dormancy process anatomical structure formation involved in morphogenesis ovulation cycle pronuclear fusion single-organism developmental process filamentous growth protein folding manchette assembly protein activation cascade synaptic vesicle docking circadian rhythm complement-dependent cytotoxicity myeloid cell homeostasis synaptic vesicle targeting antigen processing and presentation cartilage condensation meiosis I DNA methylation involved in gamete generation ovulation cycle process protein unfolding positive regulation of flagellated sperm motility involved in capacitation female pronucleus assembly synaptic vesicle priming regulation of transcription involved in meiotic cell cycle response to redox state multicellular organismal reproductive process developmental induction response to pheromone involved in conjugation with cellular fusion gene conversion at mating-type locus, DNA double-strand break processing fertilization, exchange of chromosomal proteins T cell selection natural killer cell mediated cytotoxicity mesenchymal smoothened signaling pathway involved in prostate gland development tolerance induction nitrogen compound metabolic process karyogamy involved in conjugation with cellular fusion nitric oxide storage receptor localization to synapse organic substance metabolic process cell adhesion catabolic process cytolysis cellular localization cell growth multi-organism cellular process cell proliferation gene conversion at mating-type locus, DNA double-strand break formation nitrogen utilization menstrual cycle phase immune system development single organism reproductive process leukocyte mediated cytotoxicity locomotion involved in locomotory behavior acrosome reaction immune response maintenance of cell number activation of immune response budding cell bud growth single-organism behavior spore germination ultradian rhythm FtsZ-dependent cytokinesis primary metabolic process abscission antibody-dependent cellular cytotoxicity response to inactivity response to activity P granule organization synaptic vesicle fusion to presynaptic active zone membrane primary ovarian follicle growth spermatid nucleus differentiation neurotransmitter secretion meiotic cell cycle process rhythmic behavior cellular response to stimulus activation of meiosis involved in egg activation female meiotic division cell cycle process carbon utilization peptide mating pheromone maturation involved in conjugation with cellular fusion preantral ovarian follicle growth carbohydrate utilization anatomical structure morphogenesis response to other organism cell separation after cytokinesis mycothiol-dependent detoxification detection of stimulus spermatogenesis, exchange of chromosomal proteins sperm chromatin condensation leukocyte migration ovarian cumulus expansion adhesion of symbiont to host gene conversion at mating-type locus, DNA repair synthesis leukocyte homeostasis killing of cells of other organism feeding behavior synaptic vesicle exocytosis response to abiotic stimulus cellular component organization pigmentation response to stress growth involved in symbiotic interaction response to estrogen cell wall organization or biogenesis hormone metabolic process behavioral response to nutrient intermicrovillar adhesion phenotypic switching directional locomotion cellular metabolic process response to biotic stimulus locomotory behavior cell motility chromosome localization to nuclear envelope involved in homologous chromosome segregation prevention of polyspermy spermatid nucleus elongation
Cartilage condensation, FtsZ-dependent cytokinesis and preantral ovarian follicle growth are a biological processes that atmost 1899 nutrients are involved in
cartilage condensation FtsZ-dependent cytokinesis preantral ovarian follicle growth
action atmost
action find_reverse_tuple_counts
relation biological process
type biological process
type nutrient
value 1899
[{'concept': 'nutrient'}, 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?g WHERE { { SELECT DISTINCT ?g ( COUNT ( ?e ) AS ?p ) WHERE { ?g rdf:type ontology:biological_process . ?e rdf:type ontology:nutrient . ?e property:biological_process ?g } GROUP BY ?g } . FILTER ( ?p <= 1899 ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21133183
P702
Q863908
USER
Which gene encodes Calcium/calmodulin-dependent protein kinase kinase 2 ?
(Q21133183,P702,c(Q863908))
action filter_type
action find
entity Q21133183
relation P702
type Q863908
['Q21133183', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q21133183 property:P702 ?c . ?c rdf:type ontology:Q863908 }
Calcium/calmodulin-dependent protein kinase kinase 2
action filter_type
action find
entity Calcium/calmodulin-dependent protein kinase kinase 2
relation encoded by
type nucleic acid sequence
['Calcium/calmodulin-dependent protein kinase kinase 2', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:Calcium/calmodulin-dependent_protein_kinase_kinase_2 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18035558
SYSTEM
CAMKK2
Q18035558
(Q21133183,P702,c(Q863908))
action filter_type
action find
entity Q21133183
relation P702
type Q863908
2 [ANSWER] encodes Calcium/calmodulin-dependent protein kinase 2
['Q21133183', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q21133183 property:P702 ?c . ?c rdf:type ontology:Q863908 }
CAMKK2
2 CAMKK2 encodes Calcium/calmodulin-dependent protein kinase 2
CAMKK2
action filter_type
action find
entity Calcium/calmodulin-dependent protein kinase kinase 2
relation encoded by
type nucleic acid sequence
['Calcium/calmodulin-dependent protein kinase kinase 2', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:Calcium/calmodulin-dependent_protein_kinase_kinase_2 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18035558
P684
Q863908
USER
Which is the species that has that one as its orthologous gene ?
(c(Q863908),P684,Q18035558)
action filter_type
action find
entity Q18035558
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18035558']
SELECT DISTINCT ?z WHERE { resource:Q18035558 property:P684 ?z . ?z rdf:type ontology:Q863908 }
CAMKK2
action filter_type
action find
entity CAMKK2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'CAMKK2']
SELECT DISTINCT ?z WHERE { resource:CAMKK2 property:ortholog ?z . ?z rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18295999
SYSTEM
Camkk2
Q18295999
(c(Q863908),P684,Q18035558)
action filter_type
action find
entity Q18035558
relation P684
type Q863908
[ANSWER] is the species that has that one as its orthologous gene
[{'concept': 'Q863908'}, 'P684', 'Q18035558']
SELECT DISTINCT ?z WHERE { resource:Q18035558 property:P684 ?z . ?z rdf:type ontology:Q863908 }
Camkk2
Camkk2 is the species that has that one as its orthologous gene
Camkk2
action filter_type
action find
entity CAMKK2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'CAMKK2']
SELECT DISTINCT ?z WHERE { resource:CAMKK2 property:ortholog ?z . ?z rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18295999
P688
Q181394
USER
Which nutrient is that nucleic acid sequence an encoding of ?
(Q18295999,P688,c(Q181394))
action filter_type
action find
entity Q18295999
relation P688
type Q181394
['Q18295999', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?c WHERE { resource:Q18295999 property:P688 ?c . ?c rdf:type ontology:Q181394 }
Camkk2
action filter_type
action find
entity Camkk2
relation encodes
type nutrient
['Camkk2', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?c WHERE { resource:Camkk2 property:encodes ?c . ?c rdf:type ontology:nutrient }
[]
nutrient
Q21983415
SYSTEM
Calcium/calmodulin-dependent protein kinase kinase 2
Q21983415
(Q18295999,P688,c(Q181394))
action filter_type
action find
entity Q18295999
relation P688
type Q181394
The Calcium/calmodulin-dependent protein kinase 2 is that nucleic acid sequence an encoding of
['Q18295999', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?c WHERE { resource:Q18295999 property:P688 ?c . ?c rdf:type ontology:Q181394 }
Calcium/calmodulin-dependent protein kinase kinase 2
The Calcium/calmodulin-dependent protein kinase 2 is that nucleic acid sequence an encoding of
Calcium/calmodulin-dependent protein kinase kinase 2
action filter_type
action find
entity Camkk2
relation encodes
type nutrient
['Camkk2', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?c WHERE { resource:Camkk2 property:encodes ?c . ?c rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21133183
P703
Q16521
USER
Where is Calcium/calmodulin-dependent protein kinase kinase 2 found ?
(Q21133183,P703,c(Q16521))
action filter_type
action find
entity Q21133183
relation P703
type Q16521
['Q21133183', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?j WHERE { resource:Q21133183 property:P703 ?j . ?j rdf:type ontology:Q16521 }
Calcium/calmodulin-dependent protein kinase kinase 2
action filter_type
action find
entity Calcium/calmodulin-dependent protein kinase kinase 2
relation found in taxon
type taxon
['Calcium/calmodulin-dependent protein kinase kinase 2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?j WHERE { resource:Calcium/calmodulin-dependent_protein_kinase_kinase_2 property:found_in_taxon ?j . ?j rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21133183,P703,c(Q16521))
action filter_type
action find
entity Q21133183
relation P703
type Q16521
Calcium / calmodulin-dependent protein kinase 2 is found in [ANSWER]
['Q21133183', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?j WHERE { resource:Q21133183 property:P703 ?j . ?j rdf:type ontology:Q16521 }
Homo sapiens
Calcium / calmodulin-dependent protein kinase 2 is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Calcium/calmodulin-dependent protein kinase kinase 2
relation found in taxon
type taxon
['Calcium/calmodulin-dependent protein kinase kinase 2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?j WHERE { resource:Calcium/calmodulin-dependent_protein_kinase_kinase_2 property:found_in_taxon ?j . ?j rdf:type ontology:taxon }
[]