Simple Question (Direct)
Simple Question
Q23501781
P681
Q15989253
USER
What is a component of ribosomal-protein-alanine acetyltransferase    EF2473 ?
(Q23501781,P681,c(Q15989253))
action filter_type
action find
entity Q23501781
relation P681
type Q15989253
['Q23501781', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q23501781 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
ribosomal-protein-alanine acetyltransferase    EF2473
action filter_type
action find
entity ribosomal-protein-alanine acetyltransferase    EF2473
relation cell component
type part
['ribosomal-protein-alanine acetyltransferase    EF2473', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:ribosomal-protein-alanine_acetyltransferase____EF2473 property:cell_component ?e . ?e rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23501781,P681,c(Q15989253))
action filter_type
action find
entity Q23501781
relation P681
type Q15989253
A component of ribosomal-protein-alanine acetyltransferase EF2473 is a [ANSWER]
['Q23501781', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?e WHERE { resource:Q23501781 property:P681 ?e . ?e rdf:type ontology:Q15989253 }
cytoplasm
A component of ribosomal-protein-alanine acetyltransferase EF2473 is a cytoplasm
cytoplasm
action filter_type
action find
entity ribosomal-protein-alanine acetyltransferase    EF2473
relation cell component
type part
['ribosomal-protein-alanine acetyltransferase    EF2473', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?e WHERE { resource:ribosomal-protein-alanine_acetyltransferase____EF2473 property:cell_component ?e . ?e rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23616585 Q23501781
P688
Q863908
USER
Which nucleic acid sequences encodes ribosomal-protein-alanine acetyltransferase    EF2473 or cystathionine beta-lyase MetC    SRU_1161 ?
OR((c(Q863908),P688,Q23501781), (c(Q863908),P688,Q23616585))
action filter_type
action union
action find_reverse
entity Q23501781
relation P688
action find_reverse
entity Q23616585
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q23501781'], [{'concept': 'Q863908'}, 'P688', 'Q23616585']]}
SELECT DISTINCT ?h WHERE { { { ?h property:P688 resource:Q23501781 } UNION { ?h property:P688 resource:Q23616585 } } . ?h rdf:type ontology:Q863908 }
cystathionine beta-lyase MetC    SRU_1161 ribosomal-protein-alanine acetyltransferase    EF2473
action filter_type
action union
action find_reverse
entity ribosomal-protein-alanine acetyltransferase    EF2473
relation encodes
action find_reverse
entity cystathionine beta-lyase MetC    SRU_1161
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'ribosomal-protein-alanine acetyltransferase    EF2473'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'cystathionine beta-lyase MetC    SRU_1161']]}
SELECT DISTINCT ?h WHERE { { { ?h property:encodes resource:ribosomal-protein-alanine_acetyltransferase____EF2473 } UNION { ?h property:encodes resource:cystathionine_beta-lyase_MetC____SRU_1161 } } . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23176631 Q23391582
SYSTEM
ribosomal-protein-alanine acetyltransferase    EF2473, cystathionine beta-lyase MetC    SRU_1161
Q23176631 Q23391582
OR((c(Q863908),P688,Q23501781), (c(Q863908),P688,Q23616585))
action filter_type
action union
action find_reverse
entity Q23501781
relation P688
action find_reverse
entity Q23616585
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q23501781'], [{'concept': 'Q863908'}, 'P688', 'Q23616585']]}
SELECT DISTINCT ?h WHERE { { { ?h property:P688 resource:Q23501781 } UNION { ?h property:P688 resource:Q23616585 } } . ?h rdf:type ontology:Q863908 }
ribosomal-protein-alanine acetyltransferase    EF2473 cystathionine beta-lyase MetC    SRU_1161
Ribosomal-protein-alanine acetyltransferase EF2473 and cystathionine beta-lyase MetC SRU 1161 encode ribosomal-protein-alanine acetyltransferase EF2473 or cystathionine beta-lyase MetC SRU_1161
ribosomal-protein-alanine acetyltransferase    EF2473 cystathionine beta-lyase MetC    SRU_1161
action filter_type
action union
action find_reverse
entity ribosomal-protein-alanine acetyltransferase    EF2473
relation encodes
action find_reverse
entity cystathionine beta-lyase MetC    SRU_1161
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'ribosomal-protein-alanine acetyltransferase    EF2473'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'cystathionine beta-lyase MetC    SRU_1161']]}
SELECT DISTINCT ?h WHERE { { { ?h property:encodes resource:ribosomal-protein-alanine_acetyltransferase____EF2473 } UNION { ?h property:encodes resource:cystathionine_beta-lyase_MetC____SRU_1161 } } . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q23500004 Q23501781
P703
Q631147
USER
Which infraspecific names do ribosomal-protein-alanine acetyltransferase    EF2473 and adenylate kinase    EF0228 belong to ?
AND((Q23501781,P703,c(Q631147)), (Q23500004,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23501781
relation P703
action find
entity Q23500004
relation P703
type Q631147
{'AND': [['Q23501781', 'P703', {'concept': 'Q631147'}], ['Q23500004', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?q WHERE { resource:Q23501781 property:P703 ?q . resource:Q23500004 property:P703 ?q . ?q rdf:type ontology:Q631147 }
adenylate kinase    EF0228 ribosomal-protein-alanine acetyltransferase    EF2473
action filter_type
action intersection
action find
entity ribosomal-protein-alanine acetyltransferase    EF2473
relation found in taxon
action find
entity adenylate kinase    EF0228
relation found in taxon
type infraspecific name
{'AND': [['ribosomal-protein-alanine acetyltransferase    EF2473', 'found in taxon', {'concept': 'infraspecific name'}], ['adenylate kinase    EF0228', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?q WHERE { resource:ribosomal-protein-alanine_acetyltransferase____EF2473 property:found_in_taxon ?q . resource:adenylate_kinase____EF0228 property:found_in_taxon ?q . ?q rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102965
SYSTEM
Enterococcus faecalis V583
Q21102965
AND((Q23501781,P703,c(Q631147)), (Q23500004,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23501781
relation P703
action find
entity Q23500004
relation P703
type Q631147
[ANSWER] ribosomal-protein-alanine acetyltransferase EF2473 and adenylate kinase EF0228 belong to
{'AND': [['Q23501781', 'P703', {'concept': 'Q631147'}], ['Q23500004', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?q WHERE { resource:Q23501781 property:P703 ?q . resource:Q23500004 property:P703 ?q . ?q rdf:type ontology:Q631147 }
Enterococcus faecalis V583
Enterococcus faecalis V583 ribosomal-protein-alanine acetyltransferase EF2473 and adenylate kinase EF0228 belong to
Enterococcus faecalis V583
action filter_type
action intersection
action find
entity ribosomal-protein-alanine acetyltransferase    EF2473
relation found in taxon
action find
entity adenylate kinase    EF0228
relation found in taxon
type infraspecific name
{'AND': [['ribosomal-protein-alanine acetyltransferase    EF2473', 'found in taxon', {'concept': 'infraspecific name'}], ['adenylate kinase    EF0228', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?q WHERE { resource:ribosomal-protein-alanine_acetyltransferase____EF2473 property:found_in_taxon ?q . resource:adenylate_kinase____EF0228 property:found_in_taxon ?q . ?q rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23500004
P702
Q863908
USER
Which gene encodes adenylate kinase    EF0228?
(Q21102965,P702,c(Q863908))
action filter_type
action find
entity Q23500004
relation P702
type Q863908
['Q21102965', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?o WHERE { resource:Q23500004 property:P702 ?o . ?o rdf:type ontology:Q863908 }
adenylate kinase    EF0228
action filter_type
action find
entity adenylate kinase    EF0228
relation encoded by
type nucleic acid sequence
['Enterococcus faecalis V583', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?o WHERE { resource:adenylate_kinase____EF0228 property:encoded_by ?o . ?o rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23173462
SYSTEM
adenylate kinase    EF0228
Q23173462
(Q21102965,P702,c(Q863908))
action filter_type
action find
entity Q23500004
relation P702
type Q863908
Adenylate kinase EF0228 encodes adenylate kinase EF0228
['Q21102965', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?o WHERE { resource:Q23500004 property:P702 ?o . ?o rdf:type ontology:Q863908 }
adenylate kinase    EF0228
Adenylate kinase EF0228 encodes adenylate kinase EF0228
adenylate kinase    EF0228
action filter_type
action find
entity adenylate kinase    EF0228
relation encoded by
type nucleic acid sequence
['Enterococcus faecalis V583', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?o WHERE { resource:adenylate_kinase____EF0228 property:encoded_by ?o . ?o rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Indirect
P702
Q181394
USER
How many nutrients do that nucleic acid sequence encode ?
(c(Q181394),P702,Q23173462)
action count
action filter_type
action find_reverse
entity Q23173462
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23173462']
SELECT DISTINCT ( COUNT ( ?l ) AS ?j ) WHERE { ?l property:P702 resource:Q23173462 . ?l rdf:type ontology:Q181394 }
action count
action filter_type
action find_reverse
entity adenylate kinase    EF0228
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'adenylate kinase    EF0228']
SELECT DISTINCT ( COUNT ( ?l ) AS ?j ) WHERE { ?l property:encoded_by resource:adenylate_kinase____EF0228 . ?l rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q23500004
(c(Q181394),P702,Q23173462)
action count
action filter_type
action find_reverse
entity Q23173462
relation P702
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q23173462']
SELECT DISTINCT ( COUNT ( ?l ) AS ?j ) WHERE { ?l property:P702 resource:Q23173462 . ?l rdf:type ontology:Q181394 }
adenylate kinase    EF0228
1
action count
action filter_type
action find_reverse
entity adenylate kinase    EF0228
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'adenylate kinase    EF0228']
SELECT DISTINCT ( COUNT ( ?l ) AS ?j ) WHERE { ?l property:encoded_by resource:adenylate_kinase____EF0228 . ?l rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23501781 Q23257162
P702
Q863908
USER
How many nucleic acid sequences encodes ribosomal-protein-alanine acetyltransferase    EF2473 or amidase    Mb2912c ?
(Q23501781,P702,c(Q863908)) (Q23257162,P702,c(Q863908))
action count
action union
action filter_type
action find
entity Q23501781
relation P702
type Q863908
action filter_type
action find
entity Q23257162
relation P702
type Q863908
['Q23501781', 'P702', {'concept': 'Q863908'}] ['Q23257162', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?o ) WHERE { ?t property:P702 ?v . VALUES ( ?t ) { ( resource:Q23501781 ) ( resource:Q23257162 ) } }
ribosomal-protein-alanine acetyltransferase    EF2473 amidase    Mb2912c
action count
action union
action filter_type
action find
entity ribosomal-protein-alanine acetyltransferase    EF2473
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity amidase    Mb2912c
relation encoded by
type nucleic acid sequence
['ribosomal-protein-alanine acetyltransferase    EF2473', 'encoded by', {'concept': 'nucleic acid sequence'}] ['amidase    Mb2912c', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?o ) WHERE { ?t property:encoded_by ?v . VALUES ( ?t ) { ( resource:ribosomal-protein-alanine_acetyltransferase____EF2473 ) ( resource:amidase____Mb2912c ) } }
[]
nucleic acid sequence
SYSTEM
2
Q23176631 Q23257162
(Q23501781,P702,c(Q863908)) (Q23257162,P702,c(Q863908))
action count
action union
action filter_type
action find
entity Q23501781
relation P702
type Q863908
action filter_type
action find
entity Q23257162
relation P702
type Q863908
[ANSWER]
['Q23501781', 'P702', {'concept': 'Q863908'}] ['Q23257162', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?o ) WHERE { ?t property:P702 ?v . VALUES ( ?t ) { ( resource:Q23501781 ) ( resource:Q23257162 ) } }
ribosomal-protein-alanine acetyltransferase    EF2473 amidase    Mb2912c
2
action count
action union
action filter_type
action find
entity ribosomal-protein-alanine acetyltransferase    EF2473
relation encoded by
type nucleic acid sequence
action filter_type
action find
entity amidase    Mb2912c
relation encoded by
type nucleic acid sequence
['ribosomal-protein-alanine acetyltransferase    EF2473', 'encoded by', {'concept': 'nucleic acid sequence'}] ['amidase    Mb2912c', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?o ) WHERE { ?t property:encoded_by ?v . VALUES ( ?t ) { ( resource:ribosomal-protein-alanine_acetyltransferase____EF2473 ) ( resource:amidase____Mb2912c ) } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q23173462
P702
Q181394
USER
How many nutrients do adenylate kinase    EF0228 encode ?
(c(Q181394),P702,Q23173462)
action count
action filter_type
action find_reverse
entity Q23173462
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23173462']
SELECT DISTINCT ( COUNT ( ?s ) AS ?o ) WHERE { ?s property:P702 resource:Q23173462 . ?s rdf:type ontology:Q181394 }
adenylate kinase    EF0228
action count
action filter_type
action find_reverse
entity adenylate kinase    EF0228
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'adenylate kinase    EF0228']
SELECT DISTINCT ( COUNT ( ?s ) AS ?o ) WHERE { ?s property:encoded_by resource:adenylate_kinase____EF0228 . ?s rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q23500004
(c(Q181394),P702,Q23173462)
action count
action filter_type
action find_reverse
entity Q23173462
relation P702
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q23173462']
SELECT DISTINCT ( COUNT ( ?s ) AS ?o ) WHERE { ?s property:P702 resource:Q23173462 . ?s rdf:type ontology:Q181394 }
adenylate kinase    EF0228
1
action count
action filter_type
action find_reverse
entity adenylate kinase    EF0228
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'adenylate kinase    EF0228']
SELECT DISTINCT ( COUNT ( ?s ) AS ?o ) WHERE { ?s property:encoded_by resource:adenylate_kinase____EF0228 . ?s rdf:type ontology:nutrient }
[]