Simple Question (Direct)
Simple Question
Q24128042
P681
Q15989253
USER
Which is the cell component of heme exporter protein C    EAE_01240 ?
(Q24128042,P681,c(Q15989253))
action filter_type
action find
entity Q24128042
relation P681
type Q15989253
['Q24128042', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q15989253 . resource:Q24128042 property:P681 ?g }
heme exporter protein C    EAE_01240
action filter_type
action find
entity heme exporter protein C    EAE_01240
relation cell component
type part
['heme exporter protein C    EAE_01240', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:part . resource:heme_exporter_protein_C____EAE_01240 property:cell_component ?g }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q24128042,P681,c(Q15989253))
action filter_type
action find
entity Q24128042
relation P681
type Q15989253
[ANSWER] is the cell component of heme exporter protein C EAE_01240
['Q24128042', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q15989253 . resource:Q24128042 property:P681 ?g }
membrane
Membrane is the cell component of heme exporter protein C EAE_01240
membrane
action filter_type
action find
entity heme exporter protein C    EAE_01240
relation cell component
type part
['heme exporter protein C    EAE_01240', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:part . resource:heme_exporter_protein_C____EAE_01240 property:cell_component ?g }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24128042
P688
Q863908
USER
Which nucleic acid sequence encodes heme exporter protein C    EAE_01240 ?
(c(Q863908),P688,Q24128042)
action filter_type
action find_reverse
entity Q24128042
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24128042']
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q863908 . ?a property:P688 resource:Q24128042 }
heme exporter protein C    EAE_01240
action filter_type
action find_reverse
entity heme exporter protein C    EAE_01240
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'heme exporter protein C    EAE_01240']
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:nucleic_acid_sequence . ?a property:encodes resource:heme_exporter_protein_C____EAE_01240 }
[]
nucleic acid sequence
Q23075869
SYSTEM
heme exporter protein C    EAE_01240
Q23075869
(c(Q863908),P688,Q24128042)
action filter_type
action find_reverse
entity Q24128042
relation P688
type Q863908
Heme exporter protein C EAE 01240 encodes heme exporter protein C EAE_01240
[{'concept': 'Q863908'}, 'P688', 'Q24128042']
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q863908 . ?a property:P688 resource:Q24128042 }
heme exporter protein C    EAE_01240
Heme exporter protein C EAE 01240 encodes heme exporter protein C EAE_01240
heme exporter protein C    EAE_01240
action filter_type
action find_reverse
entity heme exporter protein C    EAE_01240
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'heme exporter protein C    EAE_01240']
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:nucleic_acid_sequence . ?a property:encodes resource:heme_exporter_protein_C____EAE_01240 }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23075869
P703
Q631147
USER
Which taxon does that nucleic acid sequence belong to ?
(Q23075869,P703,c(Q631147))
action filter_type
action find
entity Q23075869
relation P703
type Q631147
['Q23075869', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?n WHERE { resource:Q23075869 property:P703 ?n . ?n rdf:type ontology:Q631147 }
heme exporter protein C    EAE_01240
action filter_type
action find
entity heme exporter protein C    EAE_01240
relation found in taxon
type infraspecific name
['heme exporter protein C    EAE_01240', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?n WHERE { resource:heme_exporter_protein_C____EAE_01240 property:found_in_taxon ?n . ?n rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102927
SYSTEM
Enterobacter aerogenes KCTC 2190
Q21102927
(Q23075869,P703,c(Q631147))
action filter_type
action find
entity Q23075869
relation P703
type Q631147
That nucleic acid sequence belongs to [ANSWER]
['Q23075869', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?n WHERE { resource:Q23075869 property:P703 ?n . ?n rdf:type ontology:Q631147 }
Enterobacter aerogenes KCTC 2190
That nucleic acid sequence belongs to Enterobacter aerogenes KCTC 2190
Enterobacter aerogenes KCTC 2190
action filter_type
action find
entity heme exporter protein C    EAE_01240
relation found in taxon
type infraspecific name
['heme exporter protein C    EAE_01240', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?n WHERE { resource:heme_exporter_protein_C____EAE_01240 property:found_in_taxon ?n . ?n rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24128042
P702
Q863908
USER
Which nucleic acid sequence encodes heme exporter protein C    EAE_01240 ?
(Q24128042,P702,c(Q863908))
action filter_type
action find
entity Q24128042
relation P702
type Q863908
['Q24128042', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q863908 . resource:Q24128042 property:P702 ?o }
heme exporter protein C    EAE_01240
action filter_type
action find
entity heme exporter protein C    EAE_01240
relation encoded by
type nucleic acid sequence
['heme exporter protein C    EAE_01240', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:nucleic_acid_sequence . resource:heme_exporter_protein_C____EAE_01240 property:encoded_by ?o }
[]
nucleic acid sequence
Q23075869
SYSTEM
heme exporter protein C    EAE_01240
Q23075869
(Q24128042,P702,c(Q863908))
action filter_type
action find
entity Q24128042
relation P702
type Q863908
Heme exporter protein C EAE 01240 encodes heme exporter protein C EAE_01240
['Q24128042', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q863908 . resource:Q24128042 property:P702 ?o }
heme exporter protein C    EAE_01240
Heme exporter protein C EAE 01240 encodes heme exporter protein C EAE_01240
heme exporter protein C    EAE_01240
action filter_type
action find
entity heme exporter protein C    EAE_01240
relation encoded by
type nucleic acid sequence
['heme exporter protein C    EAE_01240', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:nucleic_acid_sequence . resource:heme_exporter_protein_C____EAE_01240 property:encoded_by ?o }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q22573127 Q23075869
P688
Q181394
USER
Which nutrients are encoded by heme exporter protein C    EAE_01240 or hypothetical protein    YPO2200 ?
OR((Q23075869,P688,c(Q181394)), (Q22573127,P688,c(Q181394)))
action filter_type
action union
action find
entity Q23075869
relation P688
action find
entity Q22573127
relation P688
type Q181394
{'OR': [['Q23075869', 'P688', {'concept': 'Q181394'}], ['Q22573127', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?j WHERE { { { resource:Q23075869 property:P688 ?j } UNION { resource:Q22573127 property:P688 ?j } } . ?j rdf:type ontology:Q181394 }
hypothetical protein    YPO2200 heme exporter protein C    EAE_01240
action filter_type
action union
action find
entity heme exporter protein C    EAE_01240
relation encodes
action find
entity hypothetical protein    YPO2200
relation encodes
type nutrient
{'OR': [['heme exporter protein C    EAE_01240', 'encodes', {'concept': 'nutrient'}], ['hypothetical protein    YPO2200', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?j WHERE { { { resource:heme_exporter_protein_C____EAE_01240 property:encodes ?j } UNION { resource:hypothetical_protein____YPO2200 property:encodes ?j } } . ?j rdf:type ontology:nutrient }
[]
nutrient
Q23428076 Q24128042
SYSTEM
hypothetical protein    YPO2200, heme exporter protein C    EAE_01240
Q23428076 Q24128042
OR((Q23075869,P688,c(Q181394)), (Q22573127,P688,c(Q181394)))
action filter_type
action union
action find
entity Q23075869
relation P688
action find
entity Q22573127
relation P688
type Q181394
[ANSWERS]
{'OR': [['Q23075869', 'P688', {'concept': 'Q181394'}], ['Q22573127', 'P688', {'concept': 'Q181394'}]]}
SELECT DISTINCT ?j WHERE { { { resource:Q23075869 property:P688 ?j } UNION { resource:Q22573127 property:P688 ?j } } . ?j rdf:type ontology:Q181394 }
hypothetical protein    YPO2200 heme exporter protein C    EAE_01240
Hypothetical protein YPO2200 and heme exporter protein C EAE 01240 are encoded by heme exporter protein C EAE_01240 or hypothetical protein YPO2200
hypothetical protein    YPO2200 heme exporter protein C    EAE_01240
action filter_type
action union
action find
entity heme exporter protein C    EAE_01240
relation encodes
action find
entity hypothetical protein    YPO2200
relation encodes
type nutrient
{'OR': [['heme exporter protein C    EAE_01240', 'encodes', {'concept': 'nutrient'}], ['hypothetical protein    YPO2200', 'encodes', {'concept': 'nutrient'}]]}
SELECT DISTINCT ?j WHERE { { { resource:heme_exporter_protein_C____EAE_01240 property:encodes ?j } UNION { resource:hypothetical_protein____YPO2200 property:encodes ?j } } . ?j rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Single entity type
P682
Q1057 Q181394
USER
Which metabolic processes are atmost 8450 nutrients involved in ?
(c(Q181394),P682,c(Q1057))
action atmost
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
value 8450
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?v ) AS ?y ) WHERE { ?v property:P682 ?o . ?o rdf:type ontology:Q1057 . ?v rdf:type ontology:Q181394 } GROUP BY ?o } . FILTER ( ?y <= 8450 ) }
action atmost
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
value 8450
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?v ) AS ?y ) WHERE { ?v property:biological_process ?o . ?o rdf:type ontology:metabolic_process . ?v rdf:type ontology:nutrient } GROUP BY ?o } . FILTER ( ?y <= 8450 ) }
[]
metabolic process nutrient
Q22251129 Q14905693 Q133895
SYSTEM
proteolysis in other organism, translational initiation, tricarboxylic acid cycle
Q14864889 Q14907628 Q14913194 Q22274727 Q22251129 Q14905693 Q14860777 Q21134382 Q21097138 Q14819379 Q21759902 Q21133617 Q133895 Q21157940 Q21116483 Q14863351 Q21102358 Q21114210 Q14907178 Q21121151 Q14880758 Q21761098 Q14762260 Q22275051 Q21100626 Q14913439 Q14916189 Q14349667 Q21159531 Q21111970 Q898365 Q22274640 Q22279483 Q21119973 Q14865941 Q22282595 Q14907180 Q14907181 Q14905125 Q21096256 Q14863432 Q14902250 Q21124879 Q14909347 Q15313450 Q179924 Q21101220 Q21095286 Q14863986 Q14358591 Q838181 Q21116485 Q14859896 Q21103172 Q22276072 Q14914233 Q14897831 Q14645736 Q14864262 Q14859628 Q14819787 Q21119193 Q22274791 Q14819781 Q22279537 Q22283508 Q14327719 Q22279533 Q21124620 Q14860507 Q21112195 Q14890104 Q14864417 Q14864414 Q21759328 Q900386 Q14912265 Q21760838
(c(Q181394),P682,c(Q1057))
action atmost
action find_reverse_tuple_counts
relation P682
type Q1057
type Q181394
value 8450
[ANSWERS]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?v ) AS ?y ) WHERE { ?v property:P682 ?o . ?o rdf:type ontology:Q1057 . ?v rdf:type ontology:Q181394 } GROUP BY ?o } . FILTER ( ?y <= 8450 ) }
cellular aromatic compound metabolic process multicellular organism metabolic process cellular ketone body metabolic process secondary metabolic process proteolysis in other organism translational initiation hormone biosynthetic process cofactor metabolic process cellular aldehyde metabolic process one-carbon metabolic process carbon fixation actin modification tricarboxylic acid cycle nitrobenzene metabolic process lymphotoxin A biosynthetic process signal transduction by protein phosphorylation sulfur compound metabolic process regulation of translational initiation by eIF2 alpha dephosphorylation interleukin-2 biosynthetic process reactive nitrogen species metabolic process nucleobase-containing compound metabolic process photosynthesis carbohydrate metabolic process halogenated hydrocarbon metabolic process peptidyl-lysine modification to peptidyl-hypusine organophosphate metabolic process organic acid metabolic process lipid metabolic process selenium compound metabolic process reactive oxygen species biosynthetic process glycosylation cellular biosynthetic process cellular macromolecule metabolic process oxygen metabolic process connective tissue growth factor biosynthetic process ketone body metabolic process interleukin-13 biosynthetic process granulocyte macrophage colony-stimulating factor biosynthetic process neurotransmitter metabolic process cellular carbohydrate metabolic process reactive oxygen species metabolic process telomere maintenance via semi-conservative replication interleukin-8 biosynthetic process flavonoid metabolic process methylation-dependent chromatin silencing bioluminescence wax biosynthetic process amyloid fibril formation hormone catabolic process xenobiotic metabolic process respiratory burst interleukin-6 biosynthetic process cellular amino acid metabolic process DNA protection glycosyl compound metabolic process phosphatidic acid metabolic process isotype switching thyroid hormone metabolic process protein metabolic process cellular lipid metabolic process peptide hormone processing cellular modified amino acid metabolic process organic cyclic compound metabolic process generation of precursor metabolites and energy viral RNA genome replication IRES-dependent viral translational initiation small molecule metabolic process transposon integration transposition, DNA-mediated receptor internalization patched ligand maturation toxin metabolic process heterocycle metabolic process drug metabolic process cellular catabolic process demethylation cellular ketone metabolic process phosphorus metabolic process
Which metabolic processes are atmost 8450 nutrients involved in
proteolysis in other organism translational initiation tricarboxylic acid cycle
action atmost
action find_reverse_tuple_counts
relation biological process
type metabolic process
type nutrient
value 8450
[{'concept': 'nutrient'}, 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?o WHERE { { SELECT DISTINCT ?o ( COUNT ( ?v ) AS ?y ) WHERE { ?v property:biological_process ?o . ?o rdf:type ontology:metabolic_process . ?v rdf:type ontology:nutrient } GROUP BY ?o } . FILTER ( ?y <= 8450 ) }
[]