Simple Question (Direct)
Simple Question
Q5446439
P702
Q863908
USER
What is the gene that encodes rRNA 2'-O-methyltransferase fibrillarin ?
(Q5446439,P702,c(Q863908))
action filter_type
action find
entity Q5446439
relation P702
type Q863908
['Q5446439', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q863908 . resource:Q5446439 property:P702 ?w }
rRNA 2'-O-methyltransferase fibrillarin
action filter_type
action find
entity rRNA 2'-O-methyltransferase fibrillarin
relation encoded by
type nucleic acid sequence
["rRNA 2'-O-methyltransferase fibrillarin", 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:nucleic_acid_sequence . resource:rRNA_2'-O-methyltransferase_fibrillarin property:encoded_by ?w }
[]
nucleic acid sequence
Q14914390
SYSTEM
FBL
Q14914390
(Q5446439,P702,c(Q863908))
action filter_type
action find
entity Q5446439
relation P702
type Q863908
The gene that encodes rRNA 2 '- O-methyltransferase fibrillarin is called [ANSWER]
['Q5446439', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q863908 . resource:Q5446439 property:P702 ?w }
FBL
The gene that encodes rRNA 2 '- O-methyltransferase fibrillarin is called FBL
FBL
action filter_type
action find
entity rRNA 2'-O-methyltransferase fibrillarin
relation encoded by
type nucleic acid sequence
["rRNA 2'-O-methyltransferase fibrillarin", 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:nucleic_acid_sequence . resource:rRNA_2'-O-methyltransferase_fibrillarin property:encoded_by ?w }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q5446439
P682
Q2996394
USER
Which biological process is rRNA 2'-O-methyltransferase fibrillarin involved in ?
(Q5446439,P682,c(Q2996394))
action filter_type
action find
entity Q5446439
relation P682
type Q2996394
['Q5446439', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?y WHERE { resource:Q5446439 property:P682 ?y . ?y rdf:type ontology:Q2996394 }
rRNA 2'-O-methyltransferase fibrillarin
action filter_type
action find
entity rRNA 2'-O-methyltransferase fibrillarin
relation biological process
type biological process
["rRNA 2'-O-methyltransferase fibrillarin", 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?y WHERE { resource:rRNA_2'-O-methyltransferase_fibrillarin property:biological_process ?y . ?y rdf:type ontology:biological_process }
[]
biological process
Q518328
SYSTEM
methylation
Q518328
(Q5446439,P682,c(Q2996394))
action filter_type
action find
entity Q5446439
relation P682
type Q2996394
De [ANSWER] is rRNA 2'-O-methyltransferase fibrillarin involved in
['Q5446439', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?y WHERE { resource:Q5446439 property:P682 ?y . ?y rdf:type ontology:Q2996394 }
methylation
De methylation is rRNA 2'-O-methyltransferase fibrillarin involved in
methylation
action filter_type
action find
entity rRNA 2'-O-methyltransferase fibrillarin
relation biological process
type biological process
["rRNA 2'-O-methyltransferase fibrillarin", 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?y WHERE { resource:rRNA_2'-O-methyltransferase_fibrillarin property:biological_process ?y . ?y rdf:type ontology:biological_process }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21119436
Q2996394
USER
And how about Methyltransferase-like protein 25?
(Q21119436,P682,c(Q2996394))
action filter_type
action find
entity Q21119436
relation P682
type Q2996394
['Q21119436', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?h WHERE { resource:Q21119436 property:P682 ?h . ?h rdf:type ontology:Q2996394 }
Methyltransferase-like protein 25
action filter_type
action find
entity Methyltransferase-like protein 25
relation biological process
type biological process
['Methyltransferase-like protein 25', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?h WHERE { resource:Methyltransferase-like_protein_25 property:biological_process ?h . ?h rdf:type ontology:biological_process }
[]
biological process
Q518328
SYSTEM
methylation
Q518328
(Q21119436,P682,c(Q2996394))
action filter_type
action find
entity Q21119436
relation P682
type Q2996394
[ANSWER]
['Q21119436', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?h WHERE { resource:Q21119436 property:P682 ?h . ?h rdf:type ontology:Q2996394 }
methylation
methylation
action filter_type
action find
entity Methyltransferase-like protein 25
relation biological process
type biological process
['Methyltransferase-like protein 25', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?h WHERE { resource:Methyltransferase-like_protein_25 property:biological_process ?h . ?h rdf:type ontology:biological_process }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21119436
P703
Q16521
USER
Where is that nutrient found ?
(Q518328,P703,c(Q16521))
action filter_type
action find
entity Q21119436
relation P703
type Q16521
['Q518328', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?z WHERE { resource:Q21119436 property:P703 ?z . ?z rdf:type ontology:Q16521 }
Methyltransferase-like protein 25
action filter_type
action find
entity Methyltransferase-like protein 25
relation found in taxon
type taxon
['methylation', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?z WHERE { resource:Methyltransferase-like_protein_25 property:found_in_taxon ?z . ?z rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q518328,P703,c(Q16521))
action filter_type
action find
entity Q21119436
relation P703
type Q16521
That nutrient is found in [ANSWER]
['Q518328', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?z WHERE { resource:Q21119436 property:P703 ?z . ?z rdf:type ontology:Q16521 }
Homo sapiens
That nutrient is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Methyltransferase-like protein 25
relation found in taxon
type taxon
['methylation', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?z WHERE { resource:Methyltransferase-like_protein_25 property:found_in_taxon ?z . ?z rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|3 entities, 2 direct, 2(direct) are query entities, subject is indirect
Q15978631 Q19359649 Q19359611
P427
Q3343211
USER
Is that taxon of taxonomic type DONMG:1983.98 and Rausch 572 ?
(Q15978631,P427,Q19359649) (Q15978631,P427,Q19359611)
action is_in
entity Q15978631
action intersection
action find_reverse
entity Q19359649
relation P427
action find_reverse
entity Q19359611
relation P427
['Q15978631', 'P427', 'Q19359649'] ['Q15978631', 'P427', 'Q19359611']
ASK WHERE { resource:Q15978631 property:P427 resource:Q19359611 . resource:Q15978631 property:P427 resource:Q19359649 }
Homo sapiens DONMG:1983.98 Rausch 572
action is_in
entity Homo sapiens
action intersection
action find_reverse
entity DONMG:1983.98
relation taxonomic type
action find_reverse
entity Rausch 572
relation taxonomic type
['Homo sapiens', 'taxonomic type', 'DONMG:1983.98'] ['Homo sapiens', 'taxonomic type', 'Rausch 572']
ASK WHERE { resource:Homo_sapiens property:taxonomic_type resource:Rausch_572 . resource:Homo_sapiens property:taxonomic_type resource:DONMG:1983.98 }
[]
zoological nomenclature
SYSTEM
NO
(Q15978631,P427,Q19359649) (Q15978631,P427,Q19359611)
action is_in
entity Q15978631
action intersection
action find_reverse
entity Q19359649
relation P427
action find_reverse
entity Q19359611
relation P427
[ANSWER]
['Q15978631', 'P427', 'Q19359649'] ['Q15978631', 'P427', 'Q19359611']
ASK WHERE { resource:Q15978631 property:P427 resource:Q19359611 . resource:Q15978631 property:P427 resource:Q19359649 }
No
action is_in
entity Homo sapiens
action intersection
action find_reverse
entity DONMG:1983.98
relation taxonomic type
action find_reverse
entity Rausch 572
relation taxonomic type
['Homo sapiens', 'taxonomic type', 'DONMG:1983.98'] ['Homo sapiens', 'taxonomic type', 'Rausch 572']
ASK WHERE { resource:Homo_sapiens property:taxonomic_type resource:Rausch_572 . resource:Homo_sapiens property:taxonomic_type resource:DONMG:1983.98 }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q2819188
P129
Q181394 Q8386 Q79529
USER
Which nutrients do greater number of drugs or chemical substances interact with than Type-1 angiotensin II receptor ?
(c(Q8386)|c(Q79529),P129,c(Q181394))
action greater
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action count
action filter_multi_types
action find_reverse
entity Q2819188
relation P129
type Q8386
type Q79529
[[{'concept': 'Q8386'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( COUNT ( ?u ) AS ?v ) ?f WHERE { { ?u property:P129 ?f . ?f rdf:type ontology:Q181394 . ?u rdf:type ontology:Q8386 } UNION { ?f rdf:type ontology:Q181394 . ?u rdf:type ontology:Q79529 . ?u property:P129 ?f } } GROUP BY ?f } . { SELECT DISTINCT ( COUNT ( ?n ) AS ?r ) WHERE { { { ?n rdf:type ontology:Q79529 } UNION { ?n rdf:type ontology:Q8386 } } . ?n property:P129 resource:Q2819188 } } . FILTER ( ?v > ?r ) }
Type-1 angiotensin II receptor
action greater
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action count
action filter_multi_types
action find_reverse
entity Type-1 angiotensin II receptor
relation physically interacts with
type drug
type chemical substance
[[{'concept': 'drug'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( COUNT ( ?u ) AS ?v ) ?f WHERE { { ?u property:physically_interacts_with ?f . ?f rdf:type ontology:nutrient . ?u rdf:type ontology:drug } UNION { ?f rdf:type ontology:nutrient . ?u rdf:type ontology:chemical_substance . ?u property:physically_interacts_with ?f } } GROUP BY ?f } . { SELECT DISTINCT ( COUNT ( ?n ) AS ?r ) WHERE { { { ?n rdf:type ontology:chemical_substance } UNION { ?n rdf:type ontology:drug } } . ?n property:physically_interacts_with resource:Type-1_angiotensin_II_receptor } } . FILTER ( ?v > ?r ) }
[]
nutrient drug chemical substance
Q2034004 Q424401 Q1949517
SYSTEM
D(2) dopamine receptor, Epidermal growth factor receptor, 5-hydroxytryptamine receptor 2A
Q21115605 Q21110942 Q7050954 Q21116154 Q309513 Q21173427 Q308856 Q4847910 Q2271947 Q413209 Q287961 Q2663095 Q21497881 Q21173164 Q21154358 Q5123372 Q21108624 Q410142 Q288797 Q21172390 Q1486720 Q4789588 Q287958 Q1084878 Q21126810 Q14900999 Q7671479 Q7169506 Q415607 Q21109365 Q15323278 Q21110867 Q21122995 Q4847900 Q4847907 Q7671495 Q4639596 Q21116946 Q416601 Q5512777 Q5401858 Q5401857 Q4734884 Q4734887 Q4734886 Q22676679 Q21173381 Q21116162 Q21116164 Q2844056 Q5773155 Q21115334 Q21118353 Q21173406 Q288382 Q21115051 Q21115052 Q909409 Q5513985 Q415364 Q21109355 Q409867 Q4734894 Q21110872 Q4734892 Q21114578 Q3454525 Q21108118 Q4734891 Q21114576 Q21131500 Q4897175 Q7673856 Q21132915 Q21115961 Q21115962 Q21115965 Q8083989 Q21497878 Q311568 Q21122997 Q3062781 Q12746120 Q5629167 Q21115815 Q21115816 Q21115819 Q288395 Q21110532 Q21108125 Q21115046 Q21115043 Q7834290 Q21114585 Q21114582 Q21497939 Q3454531 Q21497937 Q424401 Q5009781 Q21130911 Q21150595 Q15324694 Q21096394 Q21201294 Q7671477 Q1949517 Q21109363 Q21109359 Q15324415 Q5520260 Q2034004
(c(Q8386)|c(Q79529),P129,c(Q181394))
action greater
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action count
action filter_multi_types
action find_reverse
entity Q2819188
relation P129
type Q8386
type Q79529
[ANSWERS] greater number of drugs or chemical substances interact with than Type-1 angiotensin II receptor
[[{'concept': 'Q8386'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( COUNT ( ?u ) AS ?v ) ?f WHERE { { ?u property:P129 ?f . ?f rdf:type ontology:Q181394 . ?u rdf:type ontology:Q8386 } UNION { ?f rdf:type ontology:Q181394 . ?u rdf:type ontology:Q79529 . ?u property:P129 ?f } } GROUP BY ?f } . { SELECT DISTINCT ( COUNT ( ?n ) AS ?r ) WHERE { { { ?n rdf:type ontology:Q79529 } UNION { ?n rdf:type ontology:Q8386 } } . ?n property:P129 resource:Q2819188 } } . FILTER ( ?v > ?r ) }
Vascular endothelial growth factor receptor 1 G-protein coupled receptor 55 Sodium-dependent noradrenaline transporter Adenosine receptor A3 Histamine H1 receptor Histone deacetylase 9 D(4) dopamine receptor Muscarinic acetylcholine receptor M2 Sodium-dependent dopamine transporter Transient receptor potential cation channel subfamily V member 1 Beta-2 adrenergic receptor Glucocorticoid receptor G protein-activated inward rectifier potassium channel 4 Carbonic anhydrase 1 Histone deacetylase 3 Mu-type opioid receptor Platelet-derived growth factor receptor beta Sodium-dependent serotonin transporter 5-hydroxytryptamine receptor 1B Vascular endothelial growth factor receptor 2 Glutamate receptor 3 Vasopressin V2 receptor Beta-1 adrenergic receptor Peroxisome proliferator-activated receptor gamma Prostaglandin G/H synthase 1 Kappa-type opioid receptor Transient receptor potential cation channel subfamily M member 3 Peroxisome proliferator-activated receptor alpha 3-hydroxy-3-methylglutaryl-coenzyme A reductase 5-hydroxytryptamine receptor 4 Transient receptor potential cation channel subfamily A member 1 D(1A) dopamine receptor Melatonin receptor type 1A Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 Transient receptor potential cation channel subfamily M member 8 5-hydroxytryptamine receptor 2B Carbonic anhydrase 12 Androgen receptor Gamma-aminobutyric acid receptor subunit alpha-4 Estrogen receptor Estrogen receptor beta Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor Alpha-1B adrenergic receptor Acetylcholinesterase Histone deacetylase 6 Adenosine receptor A2a Adenosine receptor A2b Muscarinic acetylcholine receptor M3 Histone deacetylase 2 Delta-type opioid receptor Vascular endothelial growth factor receptor 3 Histone deacetylase 8 Histamine H4 receptor 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 1F Mast/stem cell growth factor receptor Kit Gonadotropin-releasing hormone receptor Prostaglandin G/H synthase 2 5-hydroxytryptamine receptor 7 Nuclear receptor subfamily 1 group I member 2 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-3 Progesterone receptor 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-5 D(1B) dopamine receptor Beta-3 adrenergic receptor Substance-P receptor Carbonic anhydrase 7 Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Kappa-type opioid receptor G protein-activated inward rectifier potassium channel 2 Histamine H2 receptor Melatonin receptor type 1B Adenosine receptor A1 Muscarinic acetylcholine receptor M5 Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Histamine H3 receptor Potassium voltage-gated channel subfamily H member 1 5-hydroxytryptamine receptor 3A 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-6 Gamma-aminobutyric acid receptor subunit alpha-2 5-hydroxytryptamine receptor 7 Mineralocorticoid receptor 5-hydroxytryptamine receptor 5A Epidermal growth factor receptor Receptor-type tyrosine-protein kinase FLT3 Glutamate receptor ionotropic, NMDA 2D Cannabinoid receptor 2 Transient receptor potential cation channel subfamily V member 3 Potassium voltage-gated channel subfamily A member 5 Cannabinoid receptor 1 Transient receptor potential cation channel subfamily M member 2 5-hydroxytryptamine receptor 2A 5-hydroxytryptamine receptor 6 5-hydroxytryptamine receptor 5A Transient receptor potential cation channel subfamily M member 8 Gamma-aminobutyric acid receptor subunit alpha-1 D(2) dopamine receptor
D(2) dopamine receptor, Epidermal growth factor receptor and 5-hydroxytryptamine receptor 2A greater number of drugs or chemical substances interact with than Type-1 angiotensin II receptor
D(2) dopamine receptor Epidermal growth factor receptor 5-hydroxytryptamine receptor 2A
action greater
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action count
action filter_multi_types
action find_reverse
entity Type-1 angiotensin II receptor
relation physically interacts with
type drug
type chemical substance
[[{'concept': 'drug'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?f WHERE { { SELECT DISTINCT ( COUNT ( ?u ) AS ?v ) ?f WHERE { { ?u property:physically_interacts_with ?f . ?f rdf:type ontology:nutrient . ?u rdf:type ontology:drug } UNION { ?f rdf:type ontology:nutrient . ?u rdf:type ontology:chemical_substance . ?u property:physically_interacts_with ?f } } GROUP BY ?f } . { SELECT DISTINCT ( COUNT ( ?n ) AS ?r ) WHERE { { { ?n rdf:type ontology:chemical_substance } UNION { ?n rdf:type ontology:drug } } . ?n property:physically_interacts_with resource:Type-1_angiotensin_II_receptor } } . FILTER ( ?v > ?r ) }
[]
Clarification
Comparative|More/Less|Mult. entity type|Indirect
P129
Q181394 Q8386 Q181394
USER
Which nutrients do approximately the same number of drugs or nutrients interact with as that nutrient ?
(c(Q8386)|c(Q181394),P129,c(Q181394))
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?y WHERE { { { ?z property:P129 ?y } UNION { ?y property:P129 ?y } } . ?z rdf:type ontology:Q8386 . ?y rdf:type ontology:Q181394 }
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?y WHERE { { { ?z property:physically_interacts_with ?y } UNION { ?y property:physically_interacts_with ?y } } . ?z rdf:type ontology:drug . ?y rdf:type ontology:nutrient }
[]
nutrient drug nutrient
Comparative|More/Less|Mult. entity type|Clarification
Q2034004
SYSTEM
Did you mean D(2) dopamine receptor ?
(c(Q8386)|c(Q181394),P129,c(Q181394))
[ANSWER]
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?y WHERE { { { ?z property:P129 ?y } UNION { ?y property:P129 ?y } } . ?z rdf:type ontology:Q8386 . ?y rdf:type ontology:Q181394 }
Did you mean D(2) dopamine receptor ?
D(2) dopamine receptor
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?y WHERE { { { ?z property:physically_interacts_with ?y } UNION { ?y property:physically_interacts_with ?y } } . ?z rdf:type ontology:drug . ?y rdf:type ontology:nutrient }
[]
Comparative Reasoning (All)
USER
Yes
(c(Q8386)|c(Q181394),P129,c(Q181394))
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
[]
Q2034004 Q21108118 Q21115043
SYSTEM
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2C, 5-hydroxytryptamine receptor 1A
Q309513 Q21108118 Q21115043 Q2034004
(c(Q8386)|c(Q181394),P129,c(Q181394))
[ANSWERS] approximately the same number of drugs or nutrients interact with as that nutrient
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?y WHERE { { { ?z property:P129 ?y } UNION { ?y property:P129 ?y } } . ?z rdf:type ontology:Q8386 . ?y rdf:type ontology:Q181394 }
Histamine H1 receptor 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1A D(2) dopamine receptor
D(2) dopamine receptor, 5-hydroxytryptamine receptor 2C and 5-hydroxytryptamine receptor 1A approximately the same number of drugs or nutrients interact with as that nutrient
D(2) dopamine receptor 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1A
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?y WHERE { { { ?z property:physically_interacts_with ?y } UNION { ?y property:physically_interacts_with ?y } } . ?z rdf:type ontology:drug . ?y rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q79529
USER
Which nutrients do exactly 16 nutrients or chemical substances interact with ?
(c(Q181394)|c(Q79529),P129,c(Q181394))
action equal
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
value 16
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ( COUNT ( ?y ) AS ?b ) ?k WHERE { { ?y rdf:type ontology:Q181394 . ?k rdf:type ontology:Q181394 . ?y property:P129 ?k } UNION { ?k rdf:type ontology:Q181394 . ?y rdf:type ontology:Q79529 . ?y property:P129 ?k } } GROUP BY ?k } . FILTER ( ?b = 16 ) }
action equal
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 16
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ( COUNT ( ?y ) AS ?b ) ?k WHERE { { ?y rdf:type ontology:nutrient . ?k rdf:type ontology:nutrient . ?y property:physically_interacts_with ?k } UNION { ?k rdf:type ontology:nutrient . ?y rdf:type ontology:chemical_substance . ?y property:physically_interacts_with ?k } } GROUP BY ?k } . FILTER ( ?b = 16 ) }
[]
nutrient nutrient chemical substance
Q21114576 Q21114582 Q21116162
SYSTEM
Gamma-aminobutyric acid receptor subunit alpha-5, Gamma-aminobutyric acid receptor subunit alpha-2, Adenosine receptor A2a
Q21116162 Q21114578 Q21114576 Q21114582
(c(Q181394)|c(Q79529),P129,c(Q181394))
action equal
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
value 16
[ANSWERS]
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ( COUNT ( ?y ) AS ?b ) ?k WHERE { { ?y rdf:type ontology:Q181394 . ?k rdf:type ontology:Q181394 . ?y property:P129 ?k } UNION { ?k rdf:type ontology:Q181394 . ?y rdf:type ontology:Q79529 . ?y property:P129 ?k } } GROUP BY ?k } . FILTER ( ?b = 16 ) }
Adenosine receptor A2a Gamma-aminobutyric acid receptor subunit alpha-3 Gamma-aminobutyric acid receptor subunit alpha-5 Gamma-aminobutyric acid receptor subunit alpha-2
Which nutrients exactly 16 nutrients or chemical substances interact with
Gamma-aminobutyric acid receptor subunit alpha-5 Gamma-aminobutyric acid receptor subunit alpha-2 Adenosine receptor A2a
action equal
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 16
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?k WHERE { { SELECT DISTINCT ( COUNT ( ?y ) AS ?b ) ?k WHERE { { ?y rdf:type ontology:nutrient . ?k rdf:type ontology:nutrient . ?y property:physically_interacts_with ?k } UNION { ?k rdf:type ontology:nutrient . ?y rdf:type ontology:chemical_substance . ?y property:physically_interacts_with ?k } } GROUP BY ?k } . FILTER ( ?b = 16 ) }
[]
Clarification
Quantitative|Count|Logical operators|Indirect
P129
Q79529 Q8386
USER
How many chemical substances and drugs can interact with that nutrient ?
(c(Q79529),P129,Q21114576) (c(Q8386),P129,Q21114576) (c(Q79529),P129,Q21114576) (c(Q8386),P129,Q21114576) (c(Q79529),P129,Q21114582) (c(Q8386),P129,Q21114582) (c(Q79529),P129,Q21116162) (c(Q8386),P129,Q21116162)
[{'concept': 'Q79529'}, 'P129', 'Q21114576'] [{'concept': 'Q8386'}, 'P129', 'Q21114576'] [{'concept': 'Q79529'}, 'P129', 'Q21114576'] [{'concept': 'Q8386'}, 'P129', 'Q21114576'] [{'concept': 'Q79529'}, 'P129', 'Q21114582'] [{'concept': 'Q8386'}, 'P129', 'Q21114582'] [{'concept': 'Q79529'}, 'P129', 'Q21116162'] [{'concept': 'Q8386'}, 'P129', 'Q21116162']
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P129 resource:Q21981601 } UNION { ?y property:P129 resource:Q21981601 } UNION { ?z property:P129 resource:Q21981601 } UNION { ?y property:P129 resource:Q21981601 } UNION { ?z property:P129 resource:Q21114582 } UNION { ?y property:P129 resource:Q21114582 } UNION { ?z property:P129 resource:Q21149601 } UNION { ?y property:P129 resource:Q21149601 } } . ?z rdf:type ontology:Q79529 . ?y rdf:type ontology:Q8386 }
[{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-2'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-2'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Adenosine receptor A2a'] [{'concept': 'drug'}, 'physically interacts with', 'Adenosine receptor A2a']
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-2 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-2 } UNION { ?z property:physically_interacts_with resource:Adenosine_receptor_A2a } UNION { ?y property:physically_interacts_with resource:Adenosine_receptor_A2a } } . ?z rdf:type ontology:chemical_substance . ?y rdf:type ontology:drug }
[]
chemical substance drug
Quantitative|Count|Mult. entity type|Clarification
Q21114576
SYSTEM
Did you mean Gamma-aminobutyric acid receptor subunit alpha-5 ?
[ANSWER]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P129 resource:Q21981601 } UNION { ?y property:P129 resource:Q21981601 } UNION { ?z property:P129 resource:Q21981601 } UNION { ?y property:P129 resource:Q21981601 } UNION { ?z property:P129 resource:Q21114582 } UNION { ?y property:P129 resource:Q21114582 } UNION { ?z property:P129 resource:Q21149601 } UNION { ?y property:P129 resource:Q21149601 } } . ?z rdf:type ontology:Q79529 . ?y rdf:type ontology:Q8386 }
Did you mean Gamma-aminobutyric acid receptor subunit alpha-5 ?
Gamma-aminobutyric acid receptor subunit alpha-5
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-2 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-2 } UNION { ?z property:physically_interacts_with resource:Adenosine_receptor_A2a } UNION { ?y property:physically_interacts_with resource:Adenosine_receptor_A2a } } . ?z rdf:type ontology:chemical_substance . ?y rdf:type ontology:drug }
[]
Quantitative Reasoning (Count) (All)
USER
Yes
(c(Q79529),P129,Q21114576) (c(Q8386),P129,Q21114576) (c(Q79529),P129,Q21114576) (c(Q8386),P129,Q21114576) (c(Q79529),P129,Q21114582) (c(Q8386),P129,Q21114582) (c(Q79529),P129,Q21116162) (c(Q8386),P129,Q21116162)
[{'concept': 'Q79529'}, 'P129', 'Q21114576'] [{'concept': 'Q8386'}, 'P129', 'Q21114576'] [{'concept': 'Q79529'}, 'P129', 'Q21114576'] [{'concept': 'Q8386'}, 'P129', 'Q21114576'] [{'concept': 'Q79529'}, 'P129', 'Q21114582'] [{'concept': 'Q8386'}, 'P129', 'Q21114582'] [{'concept': 'Q79529'}, 'P129', 'Q21116162'] [{'concept': 'Q8386'}, 'P129', 'Q21116162']
[{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-2'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-2'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Adenosine receptor A2a'] [{'concept': 'drug'}, 'physically interacts with', 'Adenosine receptor A2a']
[]
SYSTEM
16 chemical substances and 4 drugs
Q62947 Q412504 Q4961977 Q15634053 Q8063121 Q7339199 Q6456086 Q4130924 Q319877 Q5205608 Q2013712 Q3639734 Q6085784 Q10861098 Q412143 Q8083967 Q416602 Q421920 Q15239768 Q15410190
(c(Q79529),P129,Q21114576) (c(Q8386),P129,Q21114576) (c(Q79529),P129,Q21114576) (c(Q8386),P129,Q21114576) (c(Q79529),P129,Q21114582) (c(Q8386),P129,Q21114582) (c(Q79529),P129,Q21116162) (c(Q8386),P129,Q21116162)
[ANSWER]
[{'concept': 'Q79529'}, 'P129', 'Q21114576'] [{'concept': 'Q8386'}, 'P129', 'Q21114576'] [{'concept': 'Q79529'}, 'P129', 'Q21114576'] [{'concept': 'Q8386'}, 'P129', 'Q21114576'] [{'concept': 'Q79529'}, 'P129', 'Q21114582'] [{'concept': 'Q8386'}, 'P129', 'Q21114582'] [{'concept': 'Q79529'}, 'P129', 'Q21116162'] [{'concept': 'Q8386'}, 'P129', 'Q21116162']
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P129 resource:Q21981601 } UNION { ?y property:P129 resource:Q21981601 } UNION { ?z property:P129 resource:Q21981601 } UNION { ?y property:P129 resource:Q21981601 } UNION { ?z property:P129 resource:Q21114582 } UNION { ?y property:P129 resource:Q21114582 } UNION { ?z property:P129 resource:Q21149601 } UNION { ?y property:P129 resource:Q21149601 } } . ?z rdf:type ontology:Q79529 . ?y rdf:type ontology:Q8386 }
flunitrazepam muscimol bretazenil CGS8216 ZK93423 Ro15-4513 L838417 gaboxadol alprazolam DMCM ocinaplon bicuculline Isoguvacine ZK93426 triazolam α5IA picrotoxin flumazenil Isonipecotic acid RO4938581
16 chemical substances and 4 drugs
[{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-5'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-2'] [{'concept': 'drug'}, 'physically interacts with', 'Gamma-aminobutyric acid receptor subunit alpha-2'] [{'concept': 'chemical substance'}, 'physically interacts with', 'Adenosine receptor A2a'] [{'concept': 'drug'}, 'physically interacts with', 'Adenosine receptor A2a']
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 } UNION { ?z property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-2 } UNION { ?y property:physically_interacts_with resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-2 } UNION { ?z property:physically_interacts_with resource:Adenosine_receptor_A2a } UNION { ?y property:physically_interacts_with resource:Adenosine_receptor_A2a } } . ?z rdf:type ontology:chemical_substance . ?y rdf:type ontology:drug }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21114576
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by Gamma-aminobutyric acid receptor subunit alpha-5 ?
(c(Q863908),P688,Q21114576)
action filter_type
action find_reverse
entity Q21114576
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21114576']
SELECT DISTINCT ?u WHERE { ?u property:P688 resource:Q21114576 . ?u rdf:type ontology:Q863908 }
Gamma-aminobutyric acid receptor subunit alpha-5
action filter_type
action find_reverse
entity Gamma-aminobutyric acid receptor subunit alpha-5
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Gamma-aminobutyric acid receptor subunit alpha-5']
SELECT DISTINCT ?u WHERE { ?u property:encodes resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 . ?u rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18025082
SYSTEM
GABRA5
Q18025082
(c(Q863908),P688,Q21114576)
action filter_type
action find_reverse
entity Q21114576
relation P688
type Q863908
The nucleic acid sequence that is encoded by Gamma-aminobutyric acid receptor subunit alpha-5 is [ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q21114576']
SELECT DISTINCT ?u WHERE { ?u property:P688 resource:Q21114576 . ?u rdf:type ontology:Q863908 }
GABRA5
The nucleic acid sequence that is encoded by Gamma-aminobutyric acid receptor subunit alpha-5 is GABRA5
GABRA5
action filter_type
action find_reverse
entity Gamma-aminobutyric acid receptor subunit alpha-5
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Gamma-aminobutyric acid receptor subunit alpha-5']
SELECT DISTINCT ?u WHERE { ?u property:encodes resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 . ?u rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21114576
P681
Q15989253
USER
Which parts are components of Gamma-aminobutyric acid receptor subunit alpha-5 ?
(Q21114576,P681,c(Q15989253))
action filter_type
action find
entity Q21114576
relation P681
type Q15989253
['Q21114576', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q15989253 . resource:Q21114576 property:P681 ?u }
Gamma-aminobutyric acid receptor subunit alpha-5
action filter_type
action find
entity Gamma-aminobutyric acid receptor subunit alpha-5
relation cell component
type part
['Gamma-aminobutyric acid receptor subunit alpha-5', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:part . resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 property:cell_component ?u }
[]
part
Q187181 Q189073 Q14349455
SYSTEM
synapse, cell junction, membrane
Q187181 Q189073 Q14349455
(Q21114576,P681,c(Q15989253))
action filter_type
action find
entity Q21114576
relation P681
type Q15989253
[ANSWERS] are components of Gamma-aminobutyric acid receptor subunit alpha-5
['Q21114576', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q15989253 . resource:Q21114576 property:P681 ?u }
synapse cell junction membrane
Synapse, cell junction and membrane are components of Gamma-aminobutyric acid receptor subunit alpha-5
synapse cell junction membrane
action filter_type
action find
entity Gamma-aminobutyric acid receptor subunit alpha-5
relation cell component
type part
['Gamma-aminobutyric acid receptor subunit alpha-5', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:part . resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 property:cell_component ?u }
[]
Simple Question (Ellipsis)
Incomplete|object parent is changed, subject and predicate remain same
Q21114576
Q5058355
USER
And which cellular component?
(Q21114576,P681,c(Q5058355))
action filter_type
action find
entity Q21114576
relation P681
type Q5058355
['Q21114576', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q5058355 . resource:Q21114576 property:P681 ?a }
Gamma-aminobutyric acid receptor subunit alpha-5
action filter_type
action find
entity Gamma-aminobutyric acid receptor subunit alpha-5
relation cell component
type cellular component
['Gamma-aminobutyric acid receptor subunit alpha-5', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:cellular_component . resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 property:cell_component ?a }
[]
cellular component
Q14877465 Q14864866 Q29548
SYSTEM
receptor complex, cell body, plasma membrane
Q14877465 Q14864866 Q29548
(Q21114576,P681,c(Q5058355))
action filter_type
action find
entity Q21114576
relation P681
type Q5058355
[ANSWERS]
['Q21114576', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q5058355 . resource:Q21114576 property:P681 ?a }
receptor complex cell body plasma membrane
receptor complex cell body plasma membrane
action filter_type
action find
entity Gamma-aminobutyric acid receptor subunit alpha-5
relation cell component
type cellular component
['Gamma-aminobutyric acid receptor subunit alpha-5', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:cellular_component . resource:Gamma-aminobutyric_acid_receptor_subunit_alpha-5 property:cell_component ?a }
[]