Simple Question (Direct)
Simple Question
Q21991771
P702
Q863908
USER
Which nucleic acid sequence encodes Probable asparagine--tRNA ligase, mitochondrial ?
(Q21991771,P702,c(Q863908))
action filter_type
action find
entity Q21991771
relation P702
type Q863908
['Q21991771', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { resource:Q21991771 property:P702 ?e . ?e rdf:type ontology:Q863908 }
Probable asparagine--tRNA ligase, mitochondrial
action filter_type
action find
entity Probable asparagine--tRNA ligase, mitochondrial
relation encoded by
type nucleic acid sequence
['Probable asparagine--tRNA ligase, mitochondrial', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { resource:Probable_asparagine--tRNA_ligase,_mitochondrial property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18299218
SYSTEM
Nars2
Q18299218
(Q21991771,P702,c(Q863908))
action filter_type
action find
entity Q21991771
relation P702
type Q863908
[ANSWER] encodes Probable asparagine--tRNA ligase, mitochondrial
['Q21991771', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { resource:Q21991771 property:P702 ?e . ?e rdf:type ontology:Q863908 }
Nars2
Nars2 encodes Probable asparagine--tRNA ligase, mitochondrial
Nars2
action filter_type
action find
entity Probable asparagine--tRNA ligase, mitochondrial
relation encoded by
type nucleic acid sequence
['Probable asparagine--tRNA ligase, mitochondrial', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { resource:Probable_asparagine--tRNA_ligase,_mitochondrial property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21991771
P681
Q15989253
USER
Which are the parts that are a component of that nutrient ?
(Q18299218,P681,c(Q15989253))
action filter_type
action find
entity Q21991771
relation P681
type Q15989253
['Q18299218', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q15989253 . resource:Q21991771 property:P681 ?o }
Probable asparagine--tRNA ligase, mitochondrial
action filter_type
action find
entity Probable asparagine--tRNA ligase, mitochondrial
relation cell component
type part
['Nars2', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:part . resource:Probable_asparagine--tRNA_ligase,_mitochondrial property:cell_component ?o }
[]
part
Q79899 Q39572
SYSTEM
cytoplasm, mitochondrion
Q79899 Q39572
(Q18299218,P681,c(Q15989253))
action filter_type
action find
entity Q21991771
relation P681
type Q15989253
The parts that are a component of that nutrient are the [ANSWERS]
['Q18299218', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:Q15989253 . resource:Q21991771 property:P681 ?o }
cytoplasm mitochondrion
The parts that are a component of that nutrient are the cytoplasm and mitochondrion
cytoplasm mitochondrion
action filter_type
action find
entity Probable asparagine--tRNA ligase, mitochondrial
relation cell component
type part
['Nars2', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?o WHERE { ?o rdf:type ontology:part . resource:Probable_asparagine--tRNA_ligase,_mitochondrial property:cell_component ?o }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q27552194
P681
Q181394
USER
Do Hsp10p YOR020C have those parts as cell component ?
(Q27552194,P681,Q79899) (Q27552194,P681,Q39572)
action is_in
entity prev_answer
action find
entity Q27552194
relation P681
['Q27552194', 'P681', 'Q79899'] ['Q27552194', 'P681', 'Q39572']
ASK WHERE { resource:Q27552194 property:P681 ?v . VALUES ( ?v ) { ( resource:Q79899 ) ( resource:Q39572 ) } }
Hsp10p YOR020C
action is_in
entity prev_answer
action find
entity Hsp10p YOR020C
relation cell component
['Hsp10p YOR020C', 'cell component', 'cytoplasm'] ['Hsp10p YOR020C', 'cell component', 'mitochondrion']
ASK WHERE { resource:Hsp10p_YOR020C property:cell_component ?v . VALUES ( ?v ) { ( resource:cytoplasm ) ( resource:mitochondrion ) } }
[]
nutrient
SYSTEM
YES
(Q27552194,P681,Q79899) (Q27552194,P681,Q39572)
action is_in
entity prev_answer
action find
entity Q27552194
relation P681
[ANSWER]
['Q27552194', 'P681', 'Q79899'] ['Q27552194', 'P681', 'Q39572']
ASK WHERE { resource:Q27552194 property:P681 ?v . VALUES ( ?v ) { ( resource:Q79899 ) ( resource:Q39572 ) } }
Yes
action is_in
entity prev_answer
action find
entity Hsp10p YOR020C
relation cell component
['Hsp10p YOR020C', 'cell component', 'cytoplasm'] ['Hsp10p YOR020C', 'cell component', 'mitochondrion']
ASK WHERE { resource:Hsp10p_YOR020C property:cell_component ?v . VALUES ( ?v ) { ( resource:cytoplasm ) ( resource:mitochondrion ) } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18299218
P684
Q863908
USER
What is the name of the species that has Nars2 as its orthologous gene ?
(c(Q863908),P684,Q18299218)
action filter_type
action find
entity Q18299218
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18299218']
SELECT DISTINCT ?k WHERE { resource:Q18299218 property:P684 ?k . ?k rdf:type ontology:Q863908 }
Nars2
action filter_type
action find
entity Nars2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Nars2']
SELECT DISTINCT ?k WHERE { resource:Nars2 property:ortholog ?k . ?k rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18046306
SYSTEM
NARS2
Q18046306
(c(Q863908),P684,Q18299218)
action filter_type
action find
entity Q18299218
relation P684
type Q863908
The name of the species that has Nars2 as its orthologous gene is [ANSWER]
[{'concept': 'Q863908'}, 'P684', 'Q18299218']
SELECT DISTINCT ?k WHERE { resource:Q18299218 property:P684 ?k . ?k rdf:type ontology:Q863908 }
NARS2
The name of the species that has Nars2 as its orthologous gene is NARS2
NARS2
action filter_type
action find
entity Nars2
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Nars2']
SELECT DISTINCT ?k WHERE { resource:Nars2 property:ortholog ?k . ?k rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18046306
P703
Q16521
USER
Where is that nucleic acid sequence found ?
(Q18046306,P703,c(Q16521))
action filter_type
action find
entity Q18046306
relation P703
type Q16521
['Q18046306', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q16521 . resource:Q18046306 property:P703 ?g }
NARS2
action filter_type
action find
entity NARS2
relation found in taxon
type taxon
['NARS2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:taxon . resource:NARS2 property:found_in_taxon ?g }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q18046306,P703,c(Q16521))
action filter_type
action find
entity Q18046306
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
['Q18046306', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q16521 . resource:Q18046306 property:P703 ?g }
Homo sapiens
That nucleic acid sequence is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity NARS2
relation found in taxon
type taxon
['NARS2', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:taxon . resource:NARS2 property:found_in_taxon ?g }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18046306
P688
Q181394
USER
Which nutrient is that nucleic acid sequence an encoding of ?
(Q15978631,P688,c(Q181394))
action filter_type
action find
entity Q18046306
relation P688
type Q181394
['Q15978631', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:Q181394 . resource:Q18046306 property:P688 ?r }
NARS2
action filter_type
action find
entity NARS2
relation encodes
type nutrient
['Homo sapiens', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:nutrient . resource:NARS2 property:encodes ?r }
[]
nutrient
Q21127326
SYSTEM
Probable asparagine--tRNA ligase, mitochondrial
Q21127326
(Q15978631,P688,c(Q181394))
action filter_type
action find
entity Q18046306
relation P688
type Q181394
[ANSWER] is that nucleic acid sequence an encoding of
['Q15978631', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:Q181394 . resource:Q18046306 property:P688 ?r }
Probable asparagine--tRNA ligase, mitochondrial
Probable asparagine--tRNA ligase, mitochondrial is that nucleic acid sequence an encoding of
Probable asparagine--tRNA ligase, mitochondrial
action filter_type
action find
entity NARS2
relation encodes
type nutrient
['Homo sapiens', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:nutrient . resource:NARS2 property:encodes ?r }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q21127326 Q18309479
P688
Q863908
USER
Does Gm8104 encode that nutrient ?
(Q18309479,P688,Q21127326)
action is_in
entity Q18309479
action find
entity Q21127326
relation P688
['Q18309479', 'P688', 'Q21127326']
ASK WHERE { resource:Q21127326 property:P688 resource:Q18309479 }
Probable asparagine--tRNA ligase, mitochondrial Gm8104
action is_in
entity Gm8104
action find
entity Probable asparagine--tRNA ligase, mitochondrial
relation encodes
['Gm8104', 'encodes', 'Probable asparagine--tRNA ligase, mitochondrial']
ASK WHERE { resource:Probable_asparagine--tRNA_ligase,_mitochondrial property:encodes resource:Gm8104 }
[]
nucleic acid sequence
SYSTEM
NO
(Q18309479,P688,Q21127326)
action is_in
entity Q18309479
action find
entity Q21127326
relation P688
[ANSWER]
['Q18309479', 'P688', 'Q21127326']
ASK WHERE { resource:Q21127326 property:P688 resource:Q18309479 }
No
action is_in
entity Gm8104
action find
entity Probable asparagine--tRNA ligase, mitochondrial
relation encodes
['Gm8104', 'encodes', 'Probable asparagine--tRNA ligase, mitochondrial']
ASK WHERE { resource:Probable_asparagine--tRNA_ligase,_mitochondrial property:encodes resource:Gm8104 }
[]