Simple Question (Direct)
Simple Question
Q27551426
P681
Q5058355
USER
Which cellular components are the components of mating pheromone a YNL145W ?
(Q27551426,P681,c(Q5058355))
action filter_type
action find
entity Q27551426
relation P681
type Q5058355
['Q27551426', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?h WHERE { resource:Q27551426 property:P681 ?h . ?h rdf:type ontology:Q5058355 }
mating pheromone a YNL145W
action filter_type
action find
entity mating pheromone a YNL145W
relation cell component
type cellular component
['mating pheromone a YNL145W', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?h WHERE { resource:mating_pheromone_a_YNL145W property:cell_component ?h . ?h rdf:type ontology:cellular_component }
[]
cellular component
Q79927 Q29548
SYSTEM
endoplasmic reticulum, plasma membrane
Q79927 Q29548
(Q27551426,P681,c(Q5058355))
action filter_type
action find
entity Q27551426
relation P681
type Q5058355
The components of mating pheromone a YNL145W are the [ANSWERS]
['Q27551426', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?h WHERE { resource:Q27551426 property:P681 ?h . ?h rdf:type ontology:Q5058355 }
endoplasmic reticulum plasma membrane
The components of mating pheromone a YNL145W are the endoplasmic reticulum and plasma membrane
endoplasmic reticulum plasma membrane
action filter_type
action find
entity mating pheromone a YNL145W
relation cell component
type cellular component
['mating pheromone a YNL145W', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?h WHERE { resource:mating_pheromone_a_YNL145W property:cell_component ?h . ?h rdf:type ontology:cellular_component }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q79927 Q29548
P361
Q5058355
USER
Which cellular components are a component of those ones ?
(c(Q5058355),P361,Q79927) (c(Q5058355),P361,Q29548)
action filter_type
action find_reverse
entity prev_answer
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', 'Q79927'] [{'concept': 'Q5058355'}, 'P361', 'Q29548']
SELECT DISTINCT ?p WHERE { ?p property:P361 ?s . ?p rdf:type ontology:Q5058355 . VALUES ( ?s ) { ( resource:Q79927 ) ( resource:Q29548 ) } }
endoplasmic reticulum plasma membrane
action filter_type
action find_reverse
entity prev_answer
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'endoplasmic reticulum'] [{'concept': 'cellular component'}, 'part of', 'plasma membrane']
SELECT DISTINCT ?p WHERE { ?p property:part_of ?s . ?p rdf:type ontology:cellular_component . VALUES ( ?s ) { ( resource:endoplasmic_reticulum ) ( resource:plasma_membrane ) } }
[]
cellular component
Q21107992 Q22327518 Q22327343
SYSTEM
ER ubiquitin ligase complex, plasma membrane region, plasma membrane-derived photosystem I
Q21107992 Q14864977 Q22327518 Q22327343
(c(Q5058355),P361,Q79927) (c(Q5058355),P361,Q29548)
action filter_type
action find_reverse
entity prev_answer
relation P361
type Q5058355
[ANSWERS] are a component of those ones
[{'concept': 'Q5058355'}, 'P361', 'Q79927'] [{'concept': 'Q5058355'}, 'P361', 'Q29548']
SELECT DISTINCT ?p WHERE { ?p property:P361 ?s . ?p rdf:type ontology:Q5058355 . VALUES ( ?s ) { ( resource:Q79927 ) ( resource:Q29548 ) } }
ER ubiquitin ligase complex plasma membrane part plasma membrane region plasma membrane-derived photosystem I
ER ubiquitin ligase complex, plasma membrane region and plasma membrane-derived photosystem I are a component of those ones
ER ubiquitin ligase complex plasma membrane region plasma membrane-derived photosystem I
action filter_type
action find_reverse
entity prev_answer
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'endoplasmic reticulum'] [{'concept': 'cellular component'}, 'part of', 'plasma membrane']
SELECT DISTINCT ?p WHERE { ?p property:part_of ?s . ?p rdf:type ontology:cellular_component . VALUES ( ?s ) { ( resource:endoplasmic_reticulum ) ( resource:plasma_membrane ) } }
[]
Clarification
Comparative|Count over More/Less|Single entity type|Indirect
P681
Q5058355 Q181394
USER
How many cellular components are components of around the same number of nutrients as that cellular component ?
(c(Q181394),P681,c(Q5058355))
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:P681 ?y . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q5058355 }
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:cell_component ?y . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:cellular_component }
[]
cellular component nutrient
Comparative|Count over More/Less|Single entity type|Clarification
Q22327518
SYSTEM
Did you mean plasma membrane region ?
(c(Q181394),P681,c(Q5058355))
[ANSWER]
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:P681 ?y . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q5058355 }
Did you mean plasma membrane region ?
plasma membrane region
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:cell_component ?y . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:cellular_component }
[]
Comparative Reasoning (Count) (All)
USER
No, I meant ER ubiquitin ligase complex. Could you tell me the answer for that?
(c(Q181394),P681,c(Q5058355))
Q21107992
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
[]
SYSTEM
144
Q7322268 Q21106124 Q21978575 Q21116315 Q14912978 Q14864171 Q21108229 Q22328732 Q21110192 Q21146508 Q14878067 Q14864978 Q24629101 Q14864977 Q14864971 Q1604780 Q21124326 Q21116899 Q14860843 Q22327688 Q22327479 Q22327686 Q14330626 Q22327683 Q21172343 Q21172341 Q24576567 Q21108045 Q671136 Q22326188 Q21469807 Q14877465 Q189094 Q14876131 Q24629096 Q22328493 Q21120634 Q14864391 Q14864390 Q14914004 Q21095183 Q14873624 Q21199165 Q14905221 Q22326802 Q21199358 Q21759948 Q21097473 Q21105647 Q21198643 Q21106212 Q21423046 Q14864382 Q14353100 Q22326799 Q14911512 Q22325164 Q26253851 Q21136996 Q21103154 Q14863372 Q21181370 Q420927 Q22327404 Q22327654 Q22327015 Q21109092 Q22327525 Q14905147 Q22329412 Q180436 Q22327092 Q21763002 Q15320191 Q21971414 Q21095089 Q22327884 Q14819352 Q21118409 Q14762605 Q14864266 Q21108411 Q21750262 Q21468808 Q21198990 Q21104759 Q14876059 Q21484280 Q21758669 Q22329407 Q22328605 Q14877492 Q14873267 Q22327128 Q21760978 Q21107992 Q22328801 Q5419646 Q21126899 Q14819441 Q1640852 Q21107481 Q21105674 Q21097505 Q22327033 Q14864663 Q14863683 Q21102478 Q14349538 Q22328819 Q138639 Q21120639 Q14330629 Q776995 Q21971286 Q21105988 Q21095308 Q21115425 Q14864857 Q14888035 Q1065756 Q22326843 Q180951 Q7168931 Q14906187 Q22327475 Q14864520 Q21112489 Q22328743 Q22328105 Q14860546 Q14860540 Q14864866 Q22328121 Q899827 Q6414172 Q21109697 Q22327736 Q14906135 Q22326919 Q14882095 Q21095620 Q193825 Q22327423
(c(Q181394),P681,c(Q5058355))
[ANSWER]
[{'concept': 'Q181394'}, 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:P681 ?y . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q5058355 }
ribbon synapse viral capsid tripartite ATP-independent periplasmic transporter complex viral nucleocapsid mitochondrial nucleoid cell periphery subapical complex Pex17p-Pex14p docking complex organelle membrane contact site mucus layer organelle membrane lipopolysaccharide receptor complex glutamatergic synapse plasma membrane part succinate dehydrogenase complex hemidesmosome protein serine/threonine phosphatase complex complement component C1 complex nuclear outer membrane prospore membrane leading edge presynapse prospore membrane myelin sheath abaxonal region eisosome inner dense plaque of desmosome outer dense plaque of desmosome perisynaptic extracellular matrix molybdopterin synthase complex synaptic vesicle aster dolichyl-phosphate-mannose-protein mannosyltransferase complex receptor complex cell surface compact myelin GABA-ergic synapse cell envelope Sec protein transport complex interleukin-12 complex intracellular organelle synaptic vesicle membrane synaptic membrane dendritic spine head intercellular bridge type III protein secretion system complex symbiont-containing vacuole membrane endoplasmic reticulum palmitoyltransferase complex bacterial nucleoid NADH dehydrogenase complex cell pole transmembrane transporter complex riboflavin synthase complex GPI-anchor transamidase complex membrane-bounded organelle presynaptic active zone cell projection alpha-1,6-mannosyltransferase complex stereocilium protein-lipid complex integral component of spine apparatus membrane immunoglobulin complex, circulating inhibitory synapse myelin sheath outer membrane protein complex ribonucleoprotein complex annulate lamellae photosystem II oxygen evolving complex nuclear outer membrane-endoplasmic reticulum membrane network cytoplasmic side of dendritic spine plasma membrane intrinsic component of membrane cytoophidium cilium protein complex involved in cell adhesion polyphosphate kinase complex synaptic cleft plasma lipoprotein particle blood microparticle cellular bud respiratory chain hyaluranon cable midbody cell-substrate junction CNTFR-CLCF1 complex cell division site retromer, tubulation complex periplasmic space perinuclear endoplasmic reticulum membrane phosphatidylinositol 3-kinase complex retromer, cargo-selective complex type II protein secretion system complex envelope PET complex lateral loop cell-cell junction fatty acid beta-oxidation multienzyme complex type I protein secretion system complex ER ubiquitin ligase complex TRAPPI protein complex excitatory synapse cell tip fibrinogen complex Schmidt-Lanterman incisure site of polarized growth Nem1-Spo7 phosphatase complex dendritic spine neck DNA repair complex transcriptional repressor complex insulin-like growth factor binding protein complex other organism cell apical part of cell HICS complex peroxisome interleukin-23 complex myelin sheath adaxonal region neuromuscular junction oligosaccharyltransferase complex stereocilium membrane retromer complex Ire1 complex cell leading edge protein-DNA complex melanosome Dsc E3 ubiquitin ligase complex chromatin perivitelline space CRLF-CLCF1 complex postsynapse extrinsic component of membrane stereocilium tip RNA cap binding complex cell septum basal part of cell clathrin-coated pit cell body intracellular immature spore endomembrane system kinocilium cyclin-dependent protein kinase 5 holoenzyme complex chaperone-mediated autophagy translocation complex contractile ring aspartate carbamoyltransferase complex angiogenin-PRI complex Flemming body extracellular matrix extracellular organelle
144
[{'concept': 'nutrient'}, 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?x ) WHERE { ?z property:cell_component ?y . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:cellular_component }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q27551426 Q169960
P681
Q5058355
USER
How many cellular components are the components of mating pheromone a YNL145W or Oxytocin ?
(Q27551426,P681,c(Q5058355)) (Q169960,P681,c(Q5058355))
action count
action union
action filter_type
action find
entity Q27551426
relation P681
type Q5058355
action filter_type
action find
entity Q169960
relation P681
type Q5058355
['Q27551426', 'P681', {'concept': 'Q5058355'}] ['Q169960', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?k ) WHERE { { resource:Q27551426 property:P681 ?d . ?d rdf:type ontology:Q5058355 } UNION { ?d rdf:type ontology:Q5058355 . resource:Q169960 property:P681 ?d } }
mating pheromone a YNL145W Oxytocin
action count
action union
action filter_type
action find
entity mating pheromone a YNL145W
relation cell component
type cellular component
action filter_type
action find
entity Oxytocin
relation cell component
type cellular component
['mating pheromone a YNL145W', 'cell component', {'concept': 'cellular component'}] ['Oxytocin', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?k ) WHERE { { resource:mating_pheromone_a_YNL145W property:cell_component ?d . ?d rdf:type ontology:cellular_component } UNION { ?d rdf:type ontology:cellular_component . resource:Oxytocin property:cell_component ?d } }
[]
cellular component
SYSTEM
3
Q2914458 Q79927 Q29548
(Q27551426,P681,c(Q5058355)) (Q169960,P681,c(Q5058355))
action count
action union
action filter_type
action find
entity Q27551426
relation P681
type Q5058355
action filter_type
action find
entity Q169960
relation P681
type Q5058355
[ANSWER]
['Q27551426', 'P681', {'concept': 'Q5058355'}] ['Q169960', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?k ) WHERE { { resource:Q27551426 property:P681 ?d . ?d rdf:type ontology:Q5058355 } UNION { ?d rdf:type ontology:Q5058355 . resource:Q169960 property:P681 ?d } }
extracellular space endoplasmic reticulum plasma membrane
3
action count
action union
action filter_type
action find
entity mating pheromone a YNL145W
relation cell component
type cellular component
action filter_type
action find
entity Oxytocin
relation cell component
type cellular component
['mating pheromone a YNL145W', 'cell component', {'concept': 'cellular component'}] ['Oxytocin', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?d ) AS ?k ) WHERE { { resource:mating_pheromone_a_YNL145W property:cell_component ?d . ?d rdf:type ontology:cellular_component } UNION { ?d rdf:type ontology:cellular_component . resource:Oxytocin property:cell_component ?d } }
[]
Comparative Reasoning (All)
Comparative|More/Less|Mult. entity type
Q22327688
P361
Q5058355 Q15989253 Q5058355
USER
Which cellular components are parts of greater number of cellular components or parts than prospore membrane leading edge ?
(c(Q5058355),P361,c(Q5058355)|c(Q15989253))
action greater
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action count
action filter_multi_types
action find
entity Q22327688
relation P361
type Q5058355
type Q15989253
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q15989253'}]]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?f ) ?b WHERE { VALUES ( ?n ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } . ?s rdf:type ?n } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?v ) AS ?g ) WHERE { resource:Q22327688 property:P361 ?v . { VALUES ( ?o ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } . ?v rdf:type ?o } } } . FILTER ( ?f > ?g ) }
prospore membrane leading edge
action greater
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type part
action count
action filter_multi_types
action find
entity prospore membrane leading edge
relation part of
type cellular component
type part
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'part'}]]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?f ) ?b WHERE { VALUES ( ?n ) { ( ontology:cellular_component ) ( ontology:part ) } . ?s rdf:type ?n } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?v ) AS ?g ) WHERE { resource:prospore_membrane_leading_edge property:part_of ?v . { VALUES ( ?o ) { ( ontology:cellular_component ) ( ontology:part ) } . ?v rdf:type ?o } } } . FILTER ( ?f > ?g ) }
[]
cellular component part cellular component
Q29548 Q22329451 Q21107992
SYSTEM
plasma membrane, basolateral part of cell, ER ubiquitin ligase complex
Q22329451 Q21107992 Q22329159 Q22327531 Q22327518 Q29548
(c(Q5058355),P361,c(Q5058355)|c(Q15989253))
action greater
action union
action find_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_tuple_counts
relation P361
type Q5058355
type Q15989253
action count
action filter_multi_types
action find
entity Q22327688
relation P361
type Q5058355
type Q15989253
[ANSWERS] are parts of greater number of cellular components or parts than prospore membrane leading edge
[{'concept': 'Q5058355'}, 'P361', [{'concept': 'Q5058355'}, {'concept': 'Q15989253'}]]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?f ) ?b WHERE { VALUES ( ?n ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } . ?s rdf:type ?n } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?v ) AS ?g ) WHERE { resource:Q22327688 property:P361 ?v . { VALUES ( ?o ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } . ?v rdf:type ?o } } } . FILTER ( ?f > ?g ) }
basolateral part of cell ER ubiquitin ligase complex ventral disc microtubule array clathrin coat of synaptic vesicle plasma membrane region plasma membrane
Plasma membrane, basolateral part of cell and ER ubiquitin ligase complex are parts of greater number of cellular components or parts than prospore membrane leading edge
plasma membrane basolateral part of cell ER ubiquitin ligase complex
action greater
action union
action find_tuple_counts
relation part of
type cellular component
type cellular component
action find_tuple_counts
relation part of
type cellular component
type part
action count
action filter_multi_types
action find
entity prospore membrane leading edge
relation part of
type cellular component
type part
[{'concept': 'cellular component'}, 'part of', [{'concept': 'cellular component'}, {'concept': 'part'}]]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?f ) ?b WHERE { VALUES ( ?n ) { ( ontology:cellular_component ) ( ontology:part ) } . ?s rdf:type ?n } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?v ) AS ?g ) WHERE { resource:prospore_membrane_leading_edge property:part_of ?v . { VALUES ( ?o ) { ( ontology:cellular_component ) ( ontology:part ) } . ?v rdf:type ?o } } } . FILTER ( ?f > ?g ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27551426
P702
Q863908
USER
What is the gene that encodes mating pheromone a YNL145W ?
(Q27551426,P702,c(Q863908))
action filter_type
action find
entity Q27551426
relation P702
type Q863908
['Q27551426', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?j WHERE { resource:Q27551426 property:P702 ?j . ?j rdf:type ontology:Q863908 }
mating pheromone a YNL145W
action filter_type
action find
entity mating pheromone a YNL145W
relation encoded by
type nucleic acid sequence
['mating pheromone a YNL145W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?j WHERE { resource:mating_pheromone_a_YNL145W property:encoded_by ?j . ?j rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27544369
SYSTEM
mating pheromone a YNL145W
Q27544369
(Q27551426,P702,c(Q863908))
action filter_type
action find
entity Q27551426
relation P702
type Q863908
The gene that encodes [ANSWER] is codes [ANSWER]
['Q27551426', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?j WHERE { resource:Q27551426 property:P702 ?j . ?j rdf:type ontology:Q863908 }
mating pheromone a YNL145W
The gene that encodes mating pheromone a YNL145W is codes mating pheromone a YNL145W
mating pheromone a YNL145W
action filter_type
action find
entity mating pheromone a YNL145W
relation encoded by
type nucleic acid sequence
['mating pheromone a YNL145W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?j WHERE { resource:mating_pheromone_a_YNL145W property:encoded_by ?j . ?j rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27544369
P688
Q181394
USER
Which nutrient is encoded by that nucleic acid sequence ?
(Q27544369,P688,c(Q181394))
action filter_type
action find
entity Q27544369
relation P688
type Q181394
['Q27544369', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?j WHERE { resource:Q27544369 property:P688 ?j . ?j rdf:type ontology:Q181394 }
mating pheromone a YNL145W
action filter_type
action find
entity mating pheromone a YNL145W
relation encodes
type nutrient
['mating pheromone a YNL145W', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?j WHERE { resource:mating_pheromone_a_YNL145W property:encodes ?j . ?j rdf:type ontology:nutrient }
[]
nutrient
Q27551426
SYSTEM
mating pheromone a YNL145W
Q27551426
(Q27544369,P688,c(Q181394))
action filter_type
action find
entity Q27544369
relation P688
type Q181394
The [ANSWER] is encoded by that nucleic acid sequence
['Q27544369', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?j WHERE { resource:Q27544369 property:P688 ?j . ?j rdf:type ontology:Q181394 }
mating pheromone a YNL145W
The mating pheromone a YNL145W is encoded by that nucleic acid sequence
mating pheromone a YNL145W
action filter_type
action find
entity mating pheromone a YNL145W
relation encodes
type nutrient
['mating pheromone a YNL145W', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?j WHERE { resource:mating_pheromone_a_YNL145W property:encodes ?j . ?j rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27551426
P703
Q631147
USER
Where is that nutrient found ?
(Q27551426,P703,c(Q631147))
action filter_type
action find
entity Q27551426
relation P703
type Q631147
['Q27551426', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q631147 . resource:Q27551426 property:P703 ?m }
mating pheromone a YNL145W
action filter_type
action find
entity mating pheromone a YNL145W
relation found in taxon
type infraspecific name
['mating pheromone a YNL145W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:infraspecific_name . resource:mating_pheromone_a_YNL145W property:found_in_taxon ?m }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27551426,P703,c(Q631147))
action filter_type
action find
entity Q27551426
relation P703
type Q631147
That nutrient is found in [ANSWER]
['Q27551426', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q631147 . resource:Q27551426 property:P703 ?m }
Saccharomyces cerevisiae S288c
That nutrient is found in Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
action filter_type
action find
entity mating pheromone a YNL145W
relation found in taxon
type infraspecific name
['mating pheromone a YNL145W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:infraspecific_name . resource:mating_pheromone_a_YNL145W property:found_in_taxon ?m }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q27510868 Q24148556
P703
Q181394
USER
Is formate dehydrogenase-O, large subunit    ECUMN_4424 found in the taxon that infraspecific name ?
(Q24148556,P703,Q27510868)
action is_in
entity Q24148556
action find
entity Q27510868
relation P703
['Q24148556', 'P703', 'Q27510868']
ASK WHERE { resource:Q27510868 property:P703 resource:Q24148556 }
Saccharomyces cerevisiae S288c formate dehydrogenase-O, large subunit    ECUMN_4424
action is_in
entity formate dehydrogenase-O, large subunit    ECUMN_4424
action find
entity Saccharomyces cerevisiae S288c
relation found in taxon
['formate dehydrogenase-O, large subunit    ECUMN_4424', 'found in taxon', 'Saccharomyces cerevisiae S288c']
ASK WHERE { resource:Saccharomyces_cerevisiae_S288c property:found_in_taxon resource:formate_dehydrogenase-O,_large_subunit____ECUMN_4424 }
[]
nutrient
SYSTEM
NO
(Q24148556,P703,Q27510868)
action is_in
entity Q24148556
action find
entity Q27510868
relation P703
[ANSWER]
['Q24148556', 'P703', 'Q27510868']
ASK WHERE { resource:Q27510868 property:P703 resource:Q24148556 }
No
action is_in
entity formate dehydrogenase-O, large subunit    ECUMN_4424
action find
entity Saccharomyces cerevisiae S288c
relation found in taxon
['formate dehydrogenase-O, large subunit    ECUMN_4424', 'found in taxon', 'Saccharomyces cerevisiae S288c']
ASK WHERE { resource:Saccharomyces_cerevisiae_S288c property:found_in_taxon resource:formate_dehydrogenase-O,_large_subunit____ECUMN_4424 }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q21122413 Q22327518
P361 P681
Q5058355
USER
What are plasma membrane region a component of and are the cell components of Mas-related G-protein coupled receptor member X3 ?
AND((Q22327518,P361,c(Q5058355)), (Q21122413,P681,c(Q5058355)))
action filter_type
action intersection
action find
entity Q22327518
relation P361
action find
entity Q21122413
relation P681
type Q5058355
{'AND': [['Q22327518', 'P361', {'concept': 'Q5058355'}], ['Q21122413', 'P681', {'concept': 'Q5058355'}]]}
SELECT DISTINCT ?r WHERE { resource:Q21122413 property:P681 ?r . resource:Q22327518 property:P361 ?r . ?r rdf:type ontology:Q5058355 }
Mas-related G-protein coupled receptor member X3 plasma membrane region
action filter_type
action intersection
action find
entity plasma membrane region
relation part of
action find
entity Mas-related G-protein coupled receptor member X3
relation cell component
type cellular component
{'AND': [['plasma membrane region', 'part of', {'concept': 'cellular component'}], ['Mas-related G-protein coupled receptor member X3', 'cell component', {'concept': 'cellular component'}]]}
SELECT DISTINCT ?r WHERE { resource:Mas-related_G-protein_coupled_receptor_member_X3 property:cell_component ?r . resource:plasma_membrane_region property:part_of ?r . ?r rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
AND((Q22327518,P361,c(Q5058355)), (Q21122413,P681,c(Q5058355)))
action filter_type
action intersection
action find
entity Q22327518
relation P361
action find
entity Q21122413
relation P681
type Q5058355
[ANSWER] region are a component of the [ANSWER] and are the cell components of Mas-related G- protein coupled receptor member X3
{'AND': [['Q22327518', 'P361', {'concept': 'Q5058355'}], ['Q21122413', 'P681', {'concept': 'Q5058355'}]]}
SELECT DISTINCT ?r WHERE { resource:Q21122413 property:P681 ?r . resource:Q22327518 property:P361 ?r . ?r rdf:type ontology:Q5058355 }
plasma membrane
Plasma membrane region are a component of the plasma membrane and are the cell components of Mas-related G- protein coupled receptor member X3
plasma membrane
action filter_type
action intersection
action find
entity plasma membrane region
relation part of
action find
entity Mas-related G-protein coupled receptor member X3
relation cell component
type cellular component
{'AND': [['plasma membrane region', 'part of', {'concept': 'cellular component'}], ['Mas-related G-protein coupled receptor member X3', 'cell component', {'concept': 'cellular component'}]]}
SELECT DISTINCT ?r WHERE { resource:Mas-related_G-protein_coupled_receptor_member_X3 property:cell_component ?r . resource:plasma_membrane_region property:part_of ?r . ?r rdf:type ontology:cellular_component }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q14633883 Q29548
P682 P681
Q181394
USER
Which nutrients have plasma membrane as cell component and are involved in regulation of transcription, DNA-templated ?
AND((c(Q181394),P681,Q29548), (c(Q181394),P682,Q14633883))
action filter_type
action intersection
action find_reverse
entity Q29548
relation P681
action find_reverse
entity Q14633883
relation P682
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P681', 'Q29548'], [{'concept': 'Q181394'}, 'P682', 'Q14633883']]}
SELECT DISTINCT ?u WHERE { ?u property:P681 resource:Q29548 . ?u property:P682 resource:Q14633883 . ?u rdf:type ontology:Q181394 }
regulation of transcription, DNA-templated plasma membrane
action filter_type
action intersection
action find_reverse
entity plasma membrane
relation cell component
action find_reverse
entity regulation of transcription, DNA-templated
relation biological process
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'cell component', 'plasma membrane'], [{'concept': 'nutrient'}, 'biological process', 'regulation of transcription, DNA-templated']]}
SELECT DISTINCT ?u WHERE { ?u property:cell_component resource:plasma_membrane . ?u property:biological_process resource:regulation_of_transcription,_DNA-templated . ?u rdf:type ontology:nutrient }
[]
nutrient
Q21114719 Q422579 Q21495902 Q14864296 Q21495393 Q22232177 Q21123216 Q23446552 Q21116515 Q24225308
SYSTEM
Some of them are Inhibitor of growth protein 2, Insulin receptor, INO80 complex subunit B, Dystrophin, BCL-6 corepressor-like protein 1, transcriptional regulator    Rv0386, Serine/threonine-protein kinase N2, nicotinamide-nucleotide adenylyltransferase    HI0763, Histone-lysine N-methyltransferase SETDB1, RNA polymerase subunit    bll0302
Q23442176 Q24219040 Q21991016 Q21990303 Q21444166 Q14914466 Q21100970 Q14903978 Q22923537 Q5446453 Q21111425 Q23448384 Q4210010 Q23445367 Q21111121 Q21157667 Q21991662 Q21984938 Q21987887 Q21116252 Q21111348 Q21494259 Q21127120 Q2006984 Q21495831 Q415271 Q21984344 Q23515013 Q21108304 Q21498719 Q21495393 Q21130998 Q21983870 Q21981491 Q1500003 Q22235359 Q23434472 Q21121619 Q21115922 Q21171526 Q21980142 Q21171522 Q21980147 Q21104817 Q27549400 Q21991412 Q21115201 Q14907201 Q21498210 Q21115205 Q23424286 Q21109634 Q22235069 Q21124898 Q21130794 Q21987896 Q2058153 Q24109856 Q21119231 Q7670160 Q21982975 Q4650909 Q14860215 Q17487737 Q21119962 Q21110503 Q21981258 Q21172829 Q5048395 Q21125207 Q14905181 Q22923351 Q423572 Q21981887 Q21123806 Q24124370 Q22231827 Q21118597 Q21987628 Q14888957 Q21119904 Q24219288 Q21124234 Q23459332 Q21493911 Q21499474 Q21988272 Q21988380 Q21132784 Q21495268 Q21132834 Q21989641 Q21104649 Q21116465 Q21981150 Q6917578 Q21113948 Q21107297 Q24098696 Q14905110 Q22232691 Q21108363 Q21132089 Q14873035 Q21115717 Q21989249 Q21989248 Q21114999 Q21992740 Q14902317 Q21992742 Q14863366 Q21118585 Q21114850 Q21171542 Q21119871 Q21496625 Q23439305 Q416601 Q21124891 Q21493903 Q21989863 Q21985068 Q23517797 Q21120003 Q21112525 Q24149924 Q21987765 Q21096246 Q21134188 Q24128333 Q21131357 Q21982455 Q21984469 Q15333187 Q21122360 Q5401858 Q21118596 Q22678794 Q21123216 Q23511424 Q21131689 Q21495902 Q21108145 Q7062526 Q21166983 Q21114541 Q23631417 Q21494334 Q5023958 Q21116368 Q1634046 Q14877504 Q21116807 Q21114719 Q21985584 Q23435143 Q422579 Q21984932 Q23429770 Q21109259 Q21134664 Q21105140 Q22923601 Q21126170 Q21988675 Q21495558 Q21115711 Q21984939 Q21111153 Q21495419 Q21131683 Q4044985 Q21992520 Q21118568 Q22233942 Q21113886 Q21116515 Q21132095 Q21156484 Q22232099 Q21989302 Q23515579 Q21991170 Q22990698 Q21119402 Q21132753 Q14904377 Q27551431 Q21108711 Q22235166 Q21984523 Q23513100 Q21172662 Q21984366 Q21120114 Q7543599 Q21991022 Q21498171 Q21116582 Q21122179 Q22235355 Q23434224 Q21495781 Q22232177 Q21990371 Q21986193 Q21436532 Q21989564 Q21111414 Q22233818 Q21983438 Q21498708 Q24225308 Q21123518 Q22235487 Q21498240 Q3067052 Q21985570 Q21495962 Q21106717 Q14912604 Q21114501 Q21108146 Q4650908 Q21991583 Q21983392 Q21992089 Q21992494 Q22161620 Q14906044 Q21115971 Q24099433 Q21097444 Q5635988 Q14862232 Q14912021 Q21494317 Q2477760 Q6917575 Q24280009 Q21981666 Q21131022 Q21140676 Q21136837 Q21110969 Q21114062 Q21172237 Q21115863 Q22989291 Q21154358 Q22990900 Q11705457 Q22923425 Q21986532 Q22678923 Q21990886 Q21989362 Q21988473 Q21119188 Q22235397 Q21979978 Q21986567 Q21173406 Q14864296 Q21114955 Q22231819 Q21136884 Q21495150 Q23600680 Q21984811 Q14911575 Q21113069 Q23516722 Q14902827 Q22235357 Q21172639 Q21984818 Q24223516 Q22232111 Q21495424 Q21988662 Q21109331 Q21498139 Q21117768 Q21103453 Q21111022 Q21174154 Q21986192 Q23629663 Q21122177 Q14864264 Q21981651 Q21494806 Q21762403 Q21984461 Q27476370 Q2112279 Q21110443 Q21982909 Q21981230 Q24279552 Q21987044 Q23499150 Q21127035 Q21981726 Q21990772 Q23514658 Q23446552 Q22232333 Q21494084 Q21132100 Q21113668 Q21491072 Q21130862 Q22235363 Q14866122 Q21986074
AND((c(Q181394),P681,Q29548), (c(Q181394),P682,Q14633883))
action filter_type
action intersection
action find_reverse
entity Q29548
relation P681
action find_reverse
entity Q14633883
relation P682
type Q181394
[ANSWERS]
{'AND': [[{'concept': 'Q181394'}, 'P681', 'Q29548'], [{'concept': 'Q181394'}, 'P682', 'Q14633883']]}
SELECT DISTINCT ?u WHERE { ?u property:P681 resource:Q29548 . ?u property:P682 resource:Q14633883 . ?u rdf:type ontology:Q181394 }
ToxR protein    VP0820 RNA polymerase factor sigma-32    blr5231 40S ribosomal protein S3 Ubiquitin carboxyl-terminal hydrolase 21 Prostate tumor-overexpressed gene 1 protein homolog Serine/threonine-protein kinase receptor R3 Cold shock domain-containing protein E1 Mothers against decapentaplegic homolog 3 TetR family transcriptional regulator    Rv3295 Fibroblast growth factor receptor 1 Coordinator of PRMT5 and differentiation stimulator RNA polymerase factor sigma-32    CBU_1909 Signal transducer and activator of transcription 3 RNA polymerase factor sigma-32    HI0269 Proto-oncogene vav Mitogen-activated protein kinase kinase kinase 7 Vacuolar-sorting protein SNF8 Histone deacetylase 8 Serine/threonine-protein kinase N1 Thyroid receptor-interacting protein 6 Axin-2 Copine-1 Regulatory solute carrier protein family 1 member 1 Insulin-like growth factor II Histidine triad nucleotide-binding protein 1 Receptor tyrosine-protein kinase erbB-2 Protein kinase C theta type sensor histidine kinase    BSU31520 NAD-dependent protein deacetylase sirtuin-2 Amyloid beta A4 precursor protein-binding family B member 1 BCL-6 corepressor-like protein 1 Alpha-enolase Muscle, skeletal receptor tyrosine-protein kinase Cyclic AMP-dependent transcription factor ATF-4 Activin receptor type-1B transcriptional regulator    Rv1358 RNA polymerase factor sigma-32    VC0150 Nuclear factor of activated T-cells, cytoplasmic 2 Frizzled-7 40S ribosomal protein S3 Regulator of G-protein signaling 19 E3 ubiquitin-protein ligase CBL Regulator of G-protein signaling 20 Receptor tyrosine-protein kinase erbB-4 Std1p YOR047C Ribosomal RNA-processing protein 8 Zinc finger protein Aiolos Pro-interleukin-16 Catenin delta-1 Melanoma-associated antigen D1 hybrid sensory kinase in two-component regulatory system with RcsB and YojN    YE1396 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 TetR family transcriptional regulator    Rv3208 Neurogenic locus notch homolog protein 4 Leupaxin Serine/threonine-protein kinase N2 Pro-interleukin-16 FixL oxygen regulated histidine kinase    SMa1229 Tyrosine-protein kinase TXK TGF-beta receptor type-1 Actin-binding Rho-activating protein Serine/threonine-protein kinase receptor R3 Sonic hedgehog protein Breast cancer type 1 susceptibility protein Repressor of RNA polymerase III transcription MAF1 homolog Protein kinase C theta type Chromodomain-helicase-DNA-binding protein 9 Regulator of G-protein signaling 20 Casein kinase II subunit alpha Homeobox protein SIX2 Activin receptor type-2B transcriptional regulator    Rv0144 Tyrosine-protein kinase BTK Homeobox protein SIX2 Prostate tumor-overexpressed gene 1 protein virulence sensor protein BvgS    BP1877 hypothetical protein    Rv0825c Krueppel-like factor 5 Leupaxin Heat shock cognate 71 kDa protein Protein KIBRA two component regulator    bll1715 Olfactory receptor 7D2 RNA polymerase sigma factor    FN1317 Beta-arrestin-1 Axin-2 Malignant T-cell-amplified sequence 1 Nucleoporin NUP53 Chromodomain-helicase-DNA-binding protein 9 RNA polymerase II elongation factor ELL Steroid receptor RNA activator 1 G/T mismatch-specific thymine DNA glycosylase E3 ubiquitin-protein ligase TRAF7 Dynamin-2 Leucine-rich repeat flightless-interacting protein 1 Mothers against decapentaplegic homolog 7 Protein Jade-1 Transcription factor Sp3 RpfC protein    XCC1856 Activin receptor type-1B transcriptional regulator    Rv0078 Cadherin EGF LAG seven-pass G-type receptor 2 INO80 complex subunit B Androgen receptor CREB-regulated transcription coactivator 1 Teneurin-2 Teneurin-1 Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform Wilms tumor protein 1-interacting protein Estrogen receptor X-ray repair cross-complementing protein 5 Insulin receptor Nucleoporin NUP53 Protein kinase C beta type Melanoma-associated antigen 1 Nuclear factor erythroid 2-related factor 2 Transcriptional repressor NF-X1 aerobic respiration control sensor protein ArcB    VF_2122 Androgen receptor Neurogenic locus notch homolog protein 2 Nuclear factor erythroid 2-related factor 2 3-phosphoinositide-dependent protein kinase 1 Integrin beta-1-binding protein 1 anti-sigma-M factor YhdK    BSU09500 Malignant T-cell-amplified sequence 1 Serine/threonine-protein kinase N1 hybrid sensory kinase in two-component regulatory system with RcsB and YojN    ECUMN_2555 Nuclear factor of activated T-cells, cytoplasmic 2 Actin-like protein 6A Melanoma antigen preferentially expressed in tumors aerobic respiration control sensor protein ArcB    EAE_04480 M-phase phosphoprotein 8 Protein KIBRA ETS translocation variant 5 Small ubiquitin-related modifier 1 Leucine zipper putative tumor suppressor 1 Estrogen receptor Krueppel-like factor 9 Pinin Serine/threonine-protein kinase N2 membrane-bound transcriptional regulator LytR    BC5265 Protein arginine N-methyltransferase 8 INO80 complex subunit B G/T mismatch-specific thymine DNA glycosylase Neurogenic locus notch homolog protein 3 ABC transporter permease    CT_069 Leucine-rich repeat flightless-interacting protein 1 manganese ABC transporter permease    RB12436 Calsenilin Calsenilin Mortality factor 4-like protein 2 Catenin beta-1 Receptor tyrosine-protein kinase erbB-2 Cyclic AMP-dependent transcription factor ATF-4 Inhibitor of growth protein 2 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 cholera toxin transcriptional activator    VC0984 Insulin receptor Histone deacetylase 3 aerobic respiration control sensor protein ArcB    AHA_0905 Beta-arrestin-1 Transcription termination factor 1 Tubby-related protein 3 two component transcriptional regulator PrrA    Rv0903c Ribosomal RNA-processing protein 8 M-phase phosphoprotein 8 Histone-lysine N-methyltransferase SETDB1 Copine-1 Histone deacetylase 11 Actin-binding Rho-activating protein Protein kinase C beta type Tribbles homolog 3 Neurogenic locus notch homolog protein 1 Tyrosine-protein kinase TXK Ubiquitin carboxyl-terminal hydrolase 21 TetR family transcriptional regulator    Rv3058c BCL-6 corepressor-like protein 1 Histone-lysine N-methyltransferase SETDB1 Low-density lipoprotein receptor-related protein 6 Signal transducer and activator of transcription 2 transcriptional regulator WhiA    Rv1423 Lethal(3)malignant brain tumor-like protein 1 transcriptional activator protein med    BSU11300 Transcription factor Sp3 RNA polymerase sigma factor RpoH    PA0376 Methyl-CpG-binding domain protein 3-like 1 Lipopolysaccharide-induced tumor necrosis factor-alpha factor Mothers against decapentaplegic homolog 7 AMP-activated serine/threonine-protein kinase regulatory subunit SNF4 YGL115W Lethal(3)malignant brain tumor-like protein 1 hypothetical protein    Rv0775 Zinc finger protein Aiolos sporulation sigma factor SigE    BC3904 Amyloid beta A4 precursor protein-binding family B member 1 Complement component 1 Q subcomponent-binding protein, mitochondrial Transcriptional repressor NF-X1 Small ubiquitin-related modifier 1 Regulatory solute carrier protein family 1 member 1 CREB-regulated transcription coactivator 1 X-ray repair cross-complementing protein 5 Teneurin-1 TetR/Acr family transcriptional regulator    Rv3173c toxin co-regulated pilus biosynthesis protein P    VC0826 Grainyhead-like protein 2 homolog transcriptional regulator    Rv0386 Neurogenic locus notch homolog protein 4 Neurogenic locus notch homolog protein 1 Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog Steroid receptor RNA activator 1 Vacuolar-sorting protein SNF8 anti-sigma-K factor RskA    Rv0444c Krueppel-like factor 5 Adenosine receptor A2a RNA polymerase subunit    bll0302 Testis-specific Y-encoded-like protein 2 TetR family transcriptional regulator    Rv3055 Transcriptional regulator Kaiso Tumor necrosis factor ligand superfamily member 6 Mitogen-activated protein kinase kinase kinase 7 Repressor of RNA polymerase III transcription MAF1 homolog Zinc finger protein basonuclin-2 Neurogenic locus notch homolog protein 3 Integrin beta-1-binding protein 1 Bifunctional endoribonuclease and deubiquitinase ZC3H12A Activin receptor type-2B Zinc finger and BTB domain-containing protein 42 Krueppel-like factor 9 Signal transducer and activator of transcription 2 E3 ubiquitin-protein ligase TRAF7 hybrid sensory kinase in two-component regulatory system with RcsB and YojN    ECIAI39_2356 Tyrosine-protein kinase BTK Grainyhead-like protein 2 homolog RNA polymerase factor sigma-32    XCC3771 AT-rich interactive domain-containing protein 2 Heat shock cognate 71 kDa protein Breast cancer type 1 susceptibility protein homolog Signal transducer and activator of transcription 3 Cold shock domain-containing protein E1 Sonic hedgehog protein Mothers against decapentaplegic homolog 3 aerobic respiration control sensor protein ArcB    O3K_02890 Protein arginine N-methyltransferase 8 KN motif and ankyrin repeat domain-containing protein 1 Histone deacetylase 11 Zinc fingers and homeoboxes protein 2 PRKC apoptosis WT1 regulator protein Protein C-ets-2 RNA polymerase II elongation factor ELL ETS translocation variant 5 two-component sensor PhoR    PA5361 Histone deacetylase 3 transcriptional regulator ToxR    PA0707 Zinc finger and BTB domain-containing protein 16 transcriptional regulator    Rv0681 Methyl-CpG-binding domain protein 3-like 1 Chloride anion exchanger Thyroid receptor-interacting protein 6 Prohibitin Polymerase I and transcript release factor Transcriptional regulator Kaiso transcriptional regulator    Rv0238 Inhibitor of growth protein 2 Neogenin Histone deacetylase 8 Dystrophin 3-phosphoinositide-dependent protein kinase 1 transcriptional regulator    Rv0328 Zinc finger and BTB domain-containing protein 42 PRKC apoptosis WT1 regulator protein RNA polymerase sigma-32 factor RpoH    SO_4583 Receptor tyrosine-protein kinase erbB-4 TGF-beta receptor type-1 Catenin delta-1 AraC family transcriptional regulator    BSU07010 Catenin beta-1 LuxR family transcriptional regulator    Rv2488c ABC transporter permease    CTL0325 Protein C-ets-2 RNA polymerase factor sigma-32    blr7337 transcriptional regulator    Rv0135c Zinc finger protein basonuclin-2 Mortality factor 4-like protein 2 LIM domain-containing protein ajuba Coordinator of PRMT5 and differentiation stimulator RNA-binding protein EWS Histone-lysine N-methyltransferase 2E Histidine triad nucleotide-binding protein 1 Polymerase I and transcript release factor Neurogenic locus notch homolog protein 2 manganese ABC transporter permease    RB12437 Teneurin-2 E3 ubiquitin-protein ligase parkin Actin-like protein 6A LIM domain-containing protein ajuba transcriptional regulator OpdE    PA2219 RNA-binding protein EWS histidine protein kinase/phosphatase, sensor for arcA    SDY_3391 Prohibitin Complement component 1 Q subcomponent-binding protein, mitochondrial Frizzled-7 NAD-dependent protein deacetylase sirtuin-2 hybrid sensory kinase in two-component regulatory system with RcsB and YojN    O3K_08355 Testis-specific Y-encoded-like protein 2 transcriptional regulator    EF1212 Rho-related GTP-binding protein RhoH Zinc fingers and homeoboxes protein 2 Transcription termination factor 1 AraC family transcriptional regulator    BSU30150 nicotinamide-nucleotide adenylyltransferase    HI0763 transcriptional regulator    Rv1404 Cadherin EGF LAG seven-pass G-type receptor 2 Dynein light chain 1, cytoplasmic ATP-binding cassette sub-family G member 1 ATP-binding cassette sub-family G member 1 Neural Wiskott-Aldrich syndrome protein transcriptional regulator    Rv1776c Tumor necrosis factor ligand superfamily member 6 Protein Jade-1
Nicotinamide-nucleotide adenylyltransferase HI0763, Histone-lysine N-methyltransferase SETDB1 and RNA polymerase subunit bll0302 have plasma membrane as cell component and are involved in regulation of transcription, DNA-templated
Inhibitor of growth protein 2 Insulin receptor INO80 complex subunit B Dystrophin BCL-6 corepressor-like protein 1 transcriptional regulator    Rv0386 Serine/threonine-protein kinase N2 nicotinamide-nucleotide adenylyltransferase    HI0763 Histone-lysine N-methyltransferase SETDB1 RNA polymerase subunit    bll0302
action filter_type
action intersection
action find_reverse
entity plasma membrane
relation cell component
action find_reverse
entity regulation of transcription, DNA-templated
relation biological process
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'cell component', 'plasma membrane'], [{'concept': 'nutrient'}, 'biological process', 'regulation of transcription, DNA-templated']]}
SELECT DISTINCT ?u WHERE { ?u property:cell_component resource:plasma_membrane . ?u property:biological_process resource:regulation_of_transcription,_DNA-templated . ?u rdf:type ontology:nutrient }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation
Q4347890 Q169960
P2176
Q2057971
USER
Which health problems are treated with Oxytocin and sodium valproate ?
AND((c(Q2057971),P2176,Q169960), (c(Q2057971),P2176,Q4347890))
action filter_type
action intersection
action find_reverse
entity Q169960
relation P2176
action find_reverse
entity Q4347890
relation P2176
type Q2057971
{'AND': [[{'concept': 'Q2057971'}, 'P2176', 'Q169960'], [{'concept': 'Q2057971'}, 'P2176', 'Q4347890']]}
SELECT DISTINCT ?h WHERE { ?h property:P2176 resource:Q169960 . ?h property:P2176 resource:Q4347890 . ?h rdf:type ontology:Q2057971 }
sodium valproate Oxytocin
action filter_type
action intersection
action find_reverse
entity Oxytocin
relation drug used for treatment
action find_reverse
entity sodium valproate
relation drug used for treatment
type health problem
{'AND': [[{'concept': 'health problem'}, 'drug used for treatment', 'Oxytocin'], [{'concept': 'health problem'}, 'drug used for treatment', 'sodium valproate']]}
SELECT DISTINCT ?h WHERE { ?h property:drug_used_for_treatment resource:Oxytocin . ?h property:drug_used_for_treatment resource:sodium_valproate . ?h rdf:type ontology:health_problem }
[]
health problem
Q7331102 Q38404
SYSTEM
alcohol abuse, autism
Q7331102 Q38404
AND((c(Q2057971),P2176,Q169960), (c(Q2057971),P2176,Q4347890))
action filter_type
action intersection
action find_reverse
entity Q169960
relation P2176
action find_reverse
entity Q4347890
relation P2176
type Q2057971
And [ANSWERS] are treated with Oxytocin and sodium valproate
{'AND': [[{'concept': 'Q2057971'}, 'P2176', 'Q169960'], [{'concept': 'Q2057971'}, 'P2176', 'Q4347890']]}
SELECT DISTINCT ?h WHERE { ?h property:P2176 resource:Q169960 . ?h property:P2176 resource:Q4347890 . ?h rdf:type ontology:Q2057971 }
alcohol abuse autism
And alcohol abuse and autism are treated with Oxytocin and sodium valproate
alcohol abuse autism
action filter_type
action intersection
action find_reverse
entity Oxytocin
relation drug used for treatment
action find_reverse
entity sodium valproate
relation drug used for treatment
type health problem
{'AND': [[{'concept': 'health problem'}, 'drug used for treatment', 'Oxytocin'], [{'concept': 'health problem'}, 'drug used for treatment', 'sodium valproate']]}
SELECT DISTINCT ?h WHERE { ?h property:drug_used_for_treatment resource:Oxytocin . ?h property:drug_used_for_treatment resource:sodium_valproate . ?h rdf:type ontology:health_problem }
[]