Simple Question (Direct)
Simple Question
Q22683586
P681
Q15989253
USER
Which are the cell components of Fukutin-related protein ?
(Q22683586,P681,c(Q15989253))
action filter_type
action find
entity Q22683586
relation P681
type Q15989253
['Q22683586', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?l WHERE { resource:Q22683586 property:P681 ?l . ?l rdf:type ontology:Q15989253 }
Fukutin-related protein
action filter_type
action find
entity Fukutin-related protein
relation cell component
type part
['Fukutin-related protein', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?l WHERE { resource:Fukutin-related_protein property:cell_component ?l . ?l rdf:type ontology:part }
[]
part
Q14645596 Q14349455
SYSTEM
extracellular region, membrane
Q14645596 Q14349455
(Q22683586,P681,c(Q15989253))
action filter_type
action find
entity Q22683586
relation P681
type Q15989253
The cell components of Fukutin-related protein are the [ANSWERS]
['Q22683586', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?l WHERE { resource:Q22683586 property:P681 ?l . ?l rdf:type ontology:Q15989253 }
extracellular region membrane
The cell components of Fukutin-related protein are the extracellular region and membrane
extracellular region membrane
action filter_type
action find
entity Fukutin-related protein
relation cell component
type part
['Fukutin-related protein', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?l WHERE { resource:Fukutin-related_protein property:cell_component ?l . ?l rdf:type ontology:part }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q14645596 Q14349455
P361
Q15989253
USER
Which parts are a portion of those ones ?
(c(Q15989253),P361,Q14645596) (c(Q15989253),P361,Q14349455)
action filter_type
action find_reverse
entity prev_answer
relation P361
type Q15989253
[{'concept': 'Q15989253'}, 'P361', 'Q14645596'] [{'concept': 'Q15989253'}, 'P361', 'Q14349455']
SELECT DISTINCT ?c WHERE { VALUES ( ?u ) { ( resource:Q14645596 ) ( resource:Q14349455 ) } . ?c property:P361 ?u . ?c rdf:type ontology:Q15989253 }
extracellular region membrane
action filter_type
action find_reverse
entity prev_answer
relation part of
type part
[{'concept': 'part'}, 'part of', 'extracellular region'] [{'concept': 'part'}, 'part of', 'membrane']
SELECT DISTINCT ?c WHERE { VALUES ( ?u ) { ( resource:extracellular_region ) ( resource:membrane ) } . ?c property:part_of ?u . ?c rdf:type ontology:part }
[]
part
Q14865122 Q22327135
SYSTEM
extracellular region part, membrane part
Q14865122 Q22327135
(c(Q15989253),P361,Q14645596) (c(Q15989253),P361,Q14349455)
action filter_type
action find_reverse
entity prev_answer
relation P361
type Q15989253
[ANSWERS] are a portion of those ones
[{'concept': 'Q15989253'}, 'P361', 'Q14645596'] [{'concept': 'Q15989253'}, 'P361', 'Q14349455']
SELECT DISTINCT ?c WHERE { VALUES ( ?u ) { ( resource:Q14645596 ) ( resource:Q14349455 ) } . ?c property:P361 ?u . ?c rdf:type ontology:Q15989253 }
extracellular region part membrane part
Extracellular region part and membrane part are a portion of those ones
extracellular region part membrane part
action filter_type
action find_reverse
entity prev_answer
relation part of
type part
[{'concept': 'part'}, 'part of', 'extracellular region'] [{'concept': 'part'}, 'part of', 'membrane']
SELECT DISTINCT ?c WHERE { VALUES ( ?u ) { ( resource:extracellular_region ) ( resource:membrane ) } . ?c property:part_of ?u . ?c rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21130995
Q15989253
USER
And how about cytoplasmic cyclin-dependent protein kinase holoenzyme complex?
(Q21130995,P361,c(Q15989253))
action filter_type
action find
entity Q21130995
relation P361
type Q15989253
['Q21130995', 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?o WHERE { resource:Q21130995 property:P361 ?o . ?o rdf:type ontology:Q15989253 }
cytoplasmic cyclin-dependent protein kinase holoenzyme complex
action filter_type
action find
entity cytoplasmic cyclin-dependent protein kinase holoenzyme complex
relation part of
type part
['cytoplasmic cyclin-dependent protein kinase holoenzyme complex', 'part of', {'concept': 'part'}]
SELECT DISTINCT ?o WHERE { resource:cytoplasmic_cyclin-dependent_protein_kinase_holoenzyme_complex property:part_of ?o . ?o rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q21130995,P361,c(Q15989253))
action filter_type
action find
entity Q21130995
relation P361
type Q15989253
[ANSWER]
['Q21130995', 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?o WHERE { resource:Q21130995 property:P361 ?o . ?o rdf:type ontology:Q15989253 }
cytoplasm
cytoplasm
action filter_type
action find
entity cytoplasmic cyclin-dependent protein kinase holoenzyme complex
relation part of
type part
['cytoplasmic cyclin-dependent protein kinase holoenzyme complex', 'part of', {'concept': 'part'}]
SELECT DISTINCT ?o WHERE { resource:cytoplasmic_cyclin-dependent_protein_kinase_holoenzyme_complex property:part_of ?o . ?o rdf:type ontology:part }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q22683586 Q414050
P681
Q15989253
USER
How many parts are the components of Fukutin-related protein and Klotho ?
(Q22683586,P681,c(Q15989253)) (Q414050,P681,c(Q15989253))
action count
action intersection
action filter_type
action find
entity Q22683586
relation P681
type Q15989253
action filter_type
action find
entity Q414050
relation P681
type Q15989253
['Q22683586', 'P681', {'concept': 'Q15989253'}] ['Q414050', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?n ) WHERE { resource:Q22683586 property:P681 ?q . ?q rdf:type ontology:Q15989253 . resource:Q414050 property:P681 ?q . ?q rdf:type ontology:Q15989253 }
Fukutin-related protein Klotho
action count
action intersection
action filter_type
action find
entity Fukutin-related protein
relation cell component
type part
action filter_type
action find
entity Klotho
relation cell component
type part
['Fukutin-related protein', 'cell component', {'concept': 'part'}] ['Klotho', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?n ) WHERE { resource:Fukutin-related_protein property:cell_component ?q . ?q rdf:type ontology:part . resource:Klotho property:cell_component ?q . ?q rdf:type ontology:part }
[]
part
SYSTEM
2
Q14645596 Q14349455
(Q22683586,P681,c(Q15989253)) (Q414050,P681,c(Q15989253))
action count
action intersection
action filter_type
action find
entity Q22683586
relation P681
type Q15989253
action filter_type
action find
entity Q414050
relation P681
type Q15989253
[ANSWER]
['Q22683586', 'P681', {'concept': 'Q15989253'}] ['Q414050', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?n ) WHERE { resource:Q22683586 property:P681 ?q . ?q rdf:type ontology:Q15989253 . resource:Q414050 property:P681 ?q . ?q rdf:type ontology:Q15989253 }
extracellular region membrane
2
action count
action intersection
action filter_type
action find
entity Fukutin-related protein
relation cell component
type part
action filter_type
action find
entity Klotho
relation cell component
type part
['Fukutin-related protein', 'cell component', {'concept': 'part'}] ['Klotho', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?n ) WHERE { resource:Fukutin-related_protein property:cell_component ?q . ?q rdf:type ontology:part . resource:Klotho property:cell_component ?q . ?q rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q27551914 Q22683586
P688
Q863908
USER
Which nucleic acid sequences encode Fukutin-related protein or putative serine/threonine protein kinase RTK1 YDL025C ?
OR((c(Q863908),P688,Q22683586), (c(Q863908),P688,Q27551914))
action filter_type
action union
action find_reverse
entity Q22683586
relation P688
action find_reverse
entity Q27551914
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q22683586'], [{'concept': 'Q863908'}, 'P688', 'Q27551914']]}
SELECT DISTINCT ?v WHERE { { { ?v property:P688 resource:Q22683586 } UNION { ?v property:P688 resource:Q27551914 } } . ?v rdf:type ontology:Q863908 }
putative serine/threonine protein kinase RTK1 YDL025C Fukutin-related protein
action filter_type
action union
action find_reverse
entity Fukutin-related protein
relation encodes
action find_reverse
entity putative serine/threonine protein kinase RTK1 YDL025C
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Fukutin-related protein'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative serine/threonine protein kinase RTK1 YDL025C']]}
SELECT DISTINCT ?v WHERE { { { ?v property:encodes resource:Fukutin-related_protein } UNION { ?v property:encodes resource:putative_serine/threonine_protein_kinase_RTK1_YDL025C } } . ?v rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18046025 Q27544852
SYSTEM
FKRP, putative serine/threonine protein kinase RTK1 YDL025C
Q18046025 Q27544852
OR((c(Q863908),P688,Q22683586), (c(Q863908),P688,Q27551914))
action filter_type
action union
action find_reverse
entity Q22683586
relation P688
action find_reverse
entity Q27551914
relation P688
type Q863908
[ANSWERS] encode Fukutin-related protein or putative serine/threonine protein kinase RTK1 YDL025C
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q22683586'], [{'concept': 'Q863908'}, 'P688', 'Q27551914']]}
SELECT DISTINCT ?v WHERE { { { ?v property:P688 resource:Q22683586 } UNION { ?v property:P688 resource:Q27551914 } } . ?v rdf:type ontology:Q863908 }
FKRP putative serine/threonine protein kinase RTK1 YDL025C
FKRP and putative serine/threonine protein kinase RTK1 YDL025C encode Fukutin-related protein or putative serine/threonine protein kinase RTK1 YDL025C
FKRP putative serine/threonine protein kinase RTK1 YDL025C
action filter_type
action union
action find_reverse
entity Fukutin-related protein
relation encodes
action find_reverse
entity putative serine/threonine protein kinase RTK1 YDL025C
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Fukutin-related protein'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative serine/threonine protein kinase RTK1 YDL025C']]}
SELECT DISTINCT ?v WHERE { { { ?v property:encodes resource:Fukutin-related_protein } UNION { ?v property:encodes resource:putative_serine/threonine_protein_kinase_RTK1_YDL025C } } . ?v rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18046025
P702
Q181394
USER
Which nutrients are encoded by FKRP ?
(c(Q181394),P702,Q18046025)
action filter_type
action find_reverse
entity Q18046025
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q18046025']
SELECT DISTINCT ?b WHERE { ?b property:P702 resource:Q18046025 . ?b rdf:type ontology:Q181394 }
FKRP
action filter_type
action find_reverse
entity FKRP
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'FKRP']
SELECT DISTINCT ?b WHERE { ?b property:encoded_by resource:FKRP . ?b rdf:type ontology:nutrient }
[]
nutrient
Q22683586 Q21117917
SYSTEM
Fukutin-related protein, Fukutin-related protein
Q22683586 Q21117917
(c(Q181394),P702,Q18046025)
action filter_type
action find_reverse
entity Q18046025
relation P702
type Q181394
[ANSWERS] are encoded by FKRP
[{'concept': 'Q181394'}, 'P702', 'Q18046025']
SELECT DISTINCT ?b WHERE { ?b property:P702 resource:Q18046025 . ?b rdf:type ontology:Q181394 }
Fukutin-related protein Fukutin-related protein
Fukutin-related protein and Fukutin-related protein are encoded by FKRP
Fukutin-related protein Fukutin-related protein
action filter_type
action find_reverse
entity FKRP
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'FKRP']
SELECT DISTINCT ?b WHERE { ?b property:encoded_by resource:FKRP . ?b rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q22683586 Q21117917
P688
Q863908
USER
Which nucleic acid sequences encodes those nutrients ?
(c(Q863908),P688,Q22683586) (c(Q863908),P688,Q21117917)
action filter_type
action find_reverse
entity prev_answer
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q22683586'] [{'concept': 'Q863908'}, 'P688', 'Q21117917']
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:Q863908 . ?z property:P688 ?f . VALUES ( ?f ) { ( resource:Q22683586 ) ( resource:Q21117917 ) } }
Fukutin-related protein Fukutin-related protein
action filter_type
action find_reverse
entity prev_answer
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Fukutin-related protein'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Fukutin-related protein']
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:nucleic_acid_sequence . ?z property:encodes ?f . VALUES ( ?f ) { ( resource:Fukutin-related_protein ) ( resource:Fukutin-related_protein ) } }
[]
nucleic acid sequence
Q18046025
SYSTEM
FKRP
Q18046025
(c(Q863908),P688,Q22683586) (c(Q863908),P688,Q21117917)
action filter_type
action find_reverse
entity prev_answer
relation P688
type Q863908
[ANSWER] encodes those nutrients
[{'concept': 'Q863908'}, 'P688', 'Q22683586'] [{'concept': 'Q863908'}, 'P688', 'Q21117917']
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:Q863908 . ?z property:P688 ?f . VALUES ( ?f ) { ( resource:Q22683586 ) ( resource:Q21117917 ) } }
FKRP
FKRP encodes those nutrients
FKRP
action filter_type
action find_reverse
entity prev_answer
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Fukutin-related protein'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Fukutin-related protein']
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:nucleic_acid_sequence . ?z property:encodes ?f . VALUES ( ?f ) { ( resource:Fukutin-related_protein ) ( resource:Fukutin-related_protein ) } }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18046025
P684
Q863908
USER
Which nucleic acid sequence is an orthologous gene for that one ?
(Q18046025,P684,c(Q863908))
action filter_type
action find
entity Q18046025
relation P684
type Q863908
['Q18046025', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?x WHERE { resource:Q18046025 property:P684 ?x . ?x rdf:type ontology:Q863908 }
FKRP
action filter_type
action find
entity FKRP
relation ortholog
type nucleic acid sequence
['FKRP', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?x WHERE { resource:FKRP property:ortholog ?x . ?x rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18299181
SYSTEM
Fkrp
Q18299181
(Q18046025,P684,c(Q863908))
action filter_type
action find
entity Q18046025
relation P684
type Q863908
[ANSWER] is an orthologous gene for that one
['Q18046025', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ?x WHERE { resource:Q18046025 property:P684 ?x . ?x rdf:type ontology:Q863908 }
Fkrp
Fkrp is an orthologous gene for that one
Fkrp
action filter_type
action find
entity FKRP
relation ortholog
type nucleic acid sequence
['FKRP', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?x WHERE { resource:FKRP property:ortholog ?x . ?x rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|3 entities, 2 direct, 2(direct) are query entities, subject is indirect
Q18299181 Q23391896 Q21057197
P684
Q863908
USER
Does that nucleic acid sequence have laminin G    Caur_3771 and RNU6-210P as its orthologous gene ?
(Q18299181,P684,Q23391896) (Q18299181,P684,Q21057197)
action is_in
entity Q18299181
action intersection
action find_reverse
entity Q23391896
relation P684
action find_reverse
entity Q21057197
relation P684
['Q18299181', 'P684', 'Q23391896'] ['Q18299181', 'P684', 'Q21057197']
ASK WHERE { resource:Q18299181 property:P684 resource:Q23391896 . resource:Q18299181 property:P684 resource:Q21057197 }
Fkrp laminin G    Caur_3771 RNU6-210P
action is_in
entity Fkrp
action intersection
action find_reverse
entity laminin G    Caur_3771
relation ortholog
action find_reverse
entity RNU6-210P
relation ortholog
['Fkrp', 'ortholog', 'laminin G    Caur_3771'] ['Fkrp', 'ortholog', 'RNU6-210P']
ASK WHERE { resource:Fkrp property:ortholog resource:laminin_G____Caur_3771 . resource:Fkrp property:ortholog resource:RNU6-210P }
[]
nucleic acid sequence
SYSTEM
NO
(Q18299181,P684,Q23391896) (Q18299181,P684,Q21057197)
action is_in
entity Q18299181
action intersection
action find_reverse
entity Q23391896
relation P684
action find_reverse
entity Q21057197
relation P684
[ANSWER]
['Q18299181', 'P684', 'Q23391896'] ['Q18299181', 'P684', 'Q21057197']
ASK WHERE { resource:Q18299181 property:P684 resource:Q23391896 . resource:Q18299181 property:P684 resource:Q21057197 }
No
action is_in
entity Fkrp
action intersection
action find_reverse
entity laminin G    Caur_3771
relation ortholog
action find_reverse
entity RNU6-210P
relation ortholog
['Fkrp', 'ortholog', 'laminin G    Caur_3771'] ['Fkrp', 'ortholog', 'RNU6-210P']
ASK WHERE { resource:Fkrp property:ortholog resource:laminin_G____Caur_3771 . resource:Fkrp property:ortholog resource:RNU6-210P }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q21117917 Q23383017
P702
Q863908
USER
Does hypothetical protein    BT9727_2358 encode Fukutin-related protein ?
(Q21117917,P702,Q23383017)
action is_in
entity Q23383017
action find
entity Q21117917
relation P702
['Q21117917', 'P702', 'Q23383017']
ASK WHERE { resource:Q21117917 property:P702 resource:Q23383017 }
Fukutin-related protein hypothetical protein    BT9727_2358
action is_in
entity hypothetical protein    BT9727_2358
action find
entity Fukutin-related protein
relation encoded by
['Fukutin-related protein', 'encoded by', 'hypothetical protein    BT9727_2358']
ASK WHERE { resource:Fukutin-related_protein property:encoded_by resource:hypothetical_protein____BT9727_2358 }
[]
nucleic acid sequence
SYSTEM
NO
(Q21117917,P702,Q23383017)
action is_in
entity Q23383017
action find
entity Q21117917
relation P702
[ANSWER]
['Q21117917', 'P702', 'Q23383017']
ASK WHERE { resource:Q21117917 property:P702 resource:Q23383017 }
No
action is_in
entity hypothetical protein    BT9727_2358
action find
entity Fukutin-related protein
relation encoded by
['Fukutin-related protein', 'encoded by', 'hypothetical protein    BT9727_2358']
ASK WHERE { resource:Fukutin-related_protein property:encoded_by resource:hypothetical_protein____BT9727_2358 }
[]