Simple Question (Direct)
Simple Question
Q23441337
P681
Q15989253
USER
Which part is a component of erythrose 4-phosphate dehydrogenase    VP2601 ?
(Q23441337,P681,c(Q15989253))
action filter_type
action find
entity Q23441337
relation P681
type Q15989253
['Q23441337', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?z WHERE { resource:Q23441337 property:P681 ?z . ?z rdf:type ontology:Q15989253 }
erythrose 4-phosphate dehydrogenase    VP2601
action filter_type
action find
entity erythrose 4-phosphate dehydrogenase    VP2601
relation cell component
type part
['erythrose 4-phosphate dehydrogenase    VP2601', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?z WHERE { resource:erythrose_4-phosphate_dehydrogenase____VP2601 property:cell_component ?z . ?z rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23441337,P681,c(Q15989253))
action filter_type
action find
entity Q23441337
relation P681
type Q15989253
[ANSWER] is a component of erythrose 4-phosphate dehydrogenase VP2601
['Q23441337', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?z WHERE { resource:Q23441337 property:P681 ?z . ?z rdf:type ontology:Q15989253 }
cytoplasm
Cytoplasm is a component of erythrose 4-phosphate dehydrogenase VP2601
cytoplasm
action filter_type
action find
entity erythrose 4-phosphate dehydrogenase    VP2601
relation cell component
type part
['erythrose 4-phosphate dehydrogenase    VP2601', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?z WHERE { resource:erythrose_4-phosphate_dehydrogenase____VP2601 property:cell_component ?z . ?z rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23441337
P688
Q863908
USER
Which nucleic acid sequence encodes erythrose 4-phosphate dehydrogenase    VP2601 ?
(c(Q863908),P688,Q23441337)
action filter_type
action find_reverse
entity Q23441337
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23441337']
SELECT DISTINCT ?l WHERE { ?l property:P688 resource:Q23441337 . ?l rdf:type ontology:Q863908 }
erythrose 4-phosphate dehydrogenase    VP2601
action filter_type
action find_reverse
entity erythrose 4-phosphate dehydrogenase    VP2601
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'erythrose 4-phosphate dehydrogenase    VP2601']
SELECT DISTINCT ?l WHERE { ?l property:encodes resource:erythrose_4-phosphate_dehydrogenase____VP2601 . ?l rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23159262
SYSTEM
erythrose 4-phosphate dehydrogenase    VP2601
Q23159262
(c(Q863908),P688,Q23441337)
action filter_type
action find_reverse
entity Q23441337
relation P688
type Q863908
Erythrose 4-phosphate dehydrogenase VP2601 encodes erythrose 4-phosphate dehydrogenase VP2601
[{'concept': 'Q863908'}, 'P688', 'Q23441337']
SELECT DISTINCT ?l WHERE { ?l property:P688 resource:Q23441337 . ?l rdf:type ontology:Q863908 }
erythrose 4-phosphate dehydrogenase    VP2601
Erythrose 4-phosphate dehydrogenase VP2601 encodes erythrose 4-phosphate dehydrogenase VP2601
erythrose 4-phosphate dehydrogenase    VP2601
action filter_type
action find_reverse
entity erythrose 4-phosphate dehydrogenase    VP2601
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'erythrose 4-phosphate dehydrogenase    VP2601']
SELECT DISTINCT ?l WHERE { ?l property:encodes resource:erythrose_4-phosphate_dehydrogenase____VP2601 . ?l rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23441337
P703
Q631147
USER
Which infraspecific name is that nutrient found in ?
(Q23159262,P703,c(Q631147))
action filter_type
action find
entity Q23441337
relation P703
type Q631147
['Q23159262', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q23441337 property:P703 ?d . ?d rdf:type ontology:Q631147 }
erythrose 4-phosphate dehydrogenase    VP2601
action filter_type
action find
entity erythrose 4-phosphate dehydrogenase    VP2601
relation found in taxon
type infraspecific name
['erythrose 4-phosphate dehydrogenase    VP2601', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:erythrose_4-phosphate_dehydrogenase____VP2601 property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102947
SYSTEM
Vibrio parahaemolyticus RIMD 2210633
Q21102947
(Q23159262,P703,c(Q631147))
action filter_type
action find
entity Q23441337
relation P703
type Q631147
[ANSWER] is that nutrient found in
['Q23159262', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q23441337 property:P703 ?d . ?d rdf:type ontology:Q631147 }
Vibrio parahaemolyticus RIMD 2210633
Vibrio parahaemolyticus RIMD 2210633 is that nutrient found in
Vibrio parahaemolyticus RIMD 2210633
action filter_type
action find
entity erythrose 4-phosphate dehydrogenase    VP2601
relation found in taxon
type infraspecific name
['erythrose 4-phosphate dehydrogenase    VP2601', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:erythrose_4-phosphate_dehydrogenase____VP2601 property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P361
Q15989253 Q234460 Q15989253
USER
How many parts are approximately 4 texts and parts a part of ?
(c(Q234460)|c(Q15989253),P361,c(Q15989253))
action count
action approx
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q234460
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q15989253
value 4
[[{'concept': 'Q234460'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?s ) WHERE { { SELECT DISTINCT ?y ( COUNT ( ?o ) AS ?r ) WHERE { { ?o property:P361 ?y . ?y rdf:type ontology:Q15989253 . ?o rdf:type ontology:Q234460 } UNION { ?o property:P361 ?y . ?y rdf:type ontology:Q15989253 . ?o rdf:type ontology:Q15989253 } } GROUP BY ?y } . FILTER ( ?r = 4 ) }
action count
action approx
action union
action find_reverse_tuple_counts
relation part of
type part
type text
action find_reverse_tuple_counts
relation part of
type part
type part
value 4
[[{'concept': 'text'}, {'concept': 'part'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?s ) WHERE { { SELECT DISTINCT ?y ( COUNT ( ?o ) AS ?r ) WHERE { { ?o property:part_of ?y . ?y rdf:type ontology:part . ?o rdf:type ontology:text } UNION { ?o property:part_of ?y . ?y rdf:type ontology:part . ?o rdf:type ontology:part } } GROUP BY ?y } . FILTER ( ?r = 4 ) }
[]
part text part
SYSTEM
62
Q24787617 Q24724839 Q24719950 Q24773317 Q24781994 Q24773030 Q24781122 Q24724794 Q24784050 Q24722080 Q24725230 Q24776171 Q24727168 Q24738774 Q24773003 Q24769143 Q24784176 Q24775380 Q24788323 Q24741257 Q24785866 Q24724841 Q24773738 Q24767877 Q24787484 Q24778236 Q24725166 Q24726113 Q24725133 Q24786351 Q24777173 Q24785163 Q24721427 Q24774984 Q24773139 Q24769639 Q24772708 Q24723641 Q24781925 Q24740393 Q24772015 Q24783329 Q24724527 Q24774689 Q24781248 Q24773027 Q24779606 Q24783253 Q24777474 Q24724550 Q24723098 Q24739241 Q24787067 Q24772130 Q24775084 Q24769753 Q24778327 Q24788276 Q24777282 Q24722272 Q24773669 Q24776889
(c(Q234460)|c(Q15989253),P361,c(Q15989253))
action count
action approx
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q234460
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q15989253
value 4
[ANSWER]
[[{'concept': 'Q234460'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?s ) WHERE { { SELECT DISTINCT ?y ( COUNT ( ?o ) AS ?r ) WHERE { { ?o property:P361 ?y . ?y rdf:type ontology:Q15989253 . ?o rdf:type ontology:Q234460 } UNION { ?o property:P361 ?y . ?y rdf:type ontology:Q15989253 . ?o rdf:type ontology:Q15989253 } } GROUP BY ?y } . FILTER ( ?r = 4 ) }
Alkaline-phosphatase-like, core domain DNA-directed DNA polymerase X Zinc finger, FYVE/PHD-type Polycystin cation channel Aminoacyl-tRNA synthetase, class II L-Aspartase-like Polyketide synthase, enoylreductase domain Cytidine deaminase-like Pyruvate-flavodoxin oxidoreductase, central domain FAD-linked oxidase-like, C-terminal Pseudouridine synthase, catalytic domain Ribosomal protein L19/L19e Ubiquinol-cytochrome c reductase, iron-sulphur subunit Copper amine oxidase, N-terminal Transcription initiation factor IIE subunit alpha, N-terminal TRAF-like SPOC-like, C-terminal domain Pullulanase, type I PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Alanyl-tRNA synthetase, class IIc, core domain Band 4.1 domain DNA ligase D Cadherin-like Formiminotransferase catalytic domain Aspartic peptidase domain Nitrite reductase [NAD(P)H] large subunit, NirB Small GTP-binding protein domain Lipid transport protein, N-terminal Polyketide synthase, beta-ketoacyl synthase domain RuvA domain 2-like Transcription termination factor NusA Zinc finger C2H2-type/integrase DNA-binding domain Biotin carboxylation domain Methyl-coenzyme M reductase, ferredoxin-like fold Rossmann-like alpha/beta/alpha sandwich fold Homeodomain-like ABC transporter-like Saposin-like Alpha-1,6-glucosidases, pullulanase-type S-adenosylmethionine synthetase superfamily Cupredoxin DNA topoisomerase, type IA, central Tetratricopeptide-like helical domain Virus, major capsid protein, C-terminal Pyridoxal phosphate-dependent transferase Nucleic acid-binding, OB-fold NAD-dependent DNA ligase, N-terminal Immunoglobulin-like domain RmlC-like jelly roll fold DNA breaking-rejoining enzyme, catalytic core Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CheY-like superfamily Viral capsid/haemagglutinin protein MIF4G-like domain DNA primase, DnaG DNA topoisomerase I, eukaryotic-type RNA polymerase sigma factor, region 2 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RNA polymerase sigma factor RpoD, C-terminal Flavivirus  glycoprotein central and dimerisation domain Translation protein SH3-like domain Prismane-like
62
action count
action approx
action union
action find_reverse_tuple_counts
relation part of
type part
type text
action find_reverse_tuple_counts
relation part of
type part
type part
value 4
[[{'concept': 'text'}, {'concept': 'part'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?s ) WHERE { { SELECT DISTINCT ?y ( COUNT ( ?o ) AS ?r ) WHERE { { ?o property:part_of ?y . ?y rdf:type ontology:part . ?o rdf:type ontology:text } UNION { ?o property:part_of ?y . ?y rdf:type ontology:part . ?o rdf:type ontology:part } } GROUP BY ?y } . FILTER ( ?r = 4 ) }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q23441337
P702
Q863908
USER
How many nucleic acid sequences genes encode erythrose 4-phosphate dehydrogenase    VP2601 ?
(Q23441337,P702,c(Q863908))
action count
action filter_type
action find
entity Q23441337
relation P702
type Q863908
['Q23441337', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?u ) AS ?e ) WHERE { resource:Q23441337 property:P702 ?u . ?u rdf:type ontology:Q863908 }
erythrose 4-phosphate dehydrogenase    VP2601
action count
action filter_type
action find
entity erythrose 4-phosphate dehydrogenase    VP2601
relation encoded by
type nucleic acid sequence
['erythrose 4-phosphate dehydrogenase    VP2601', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?u ) AS ?e ) WHERE { resource:erythrose_4-phosphate_dehydrogenase____VP2601 property:encoded_by ?u . ?u rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q23159262
(Q23441337,P702,c(Q863908))
action count
action filter_type
action find
entity Q23441337
relation P702
type Q863908
[ANSWER]
['Q23441337', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?u ) AS ?e ) WHERE { resource:Q23441337 property:P702 ?u . ?u rdf:type ontology:Q863908 }
erythrose 4-phosphate dehydrogenase    VP2601
1
action count
action filter_type
action find
entity erythrose 4-phosphate dehydrogenase    VP2601
relation encoded by
type nucleic acid sequence
['erythrose 4-phosphate dehydrogenase    VP2601', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?u ) AS ?e ) WHERE { resource:erythrose_4-phosphate_dehydrogenase____VP2601 property:encoded_by ?u . ?u rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q23470322
Q863908
USER
And what about 5,10-methylenetetrahydrofolate reductase    CT1368?
(Q23470322,P702,c(Q863908))
action count
action filter_type
action find
entity Q23470322
relation P702
type Q863908
['Q23470322', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?o ) WHERE { resource:Q23470322 property:P702 ?w . ?w rdf:type ontology:Q863908 }
5,10-methylenetetrahydrofolate reductase    CT1368
action count
action filter_type
action find
entity 5,10-methylenetetrahydrofolate reductase    CT1368
relation encoded by
type nucleic acid sequence
['5,10-methylenetetrahydrofolate reductase    CT1368', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?o ) WHERE { resource:5,10-methylenetetrahydrofolate_reductase____CT1368 property:encoded_by ?w . ?w rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
(Q23470322,P702,c(Q863908))
action count
action filter_type
action find
entity Q23470322
relation P702
type Q863908
[ANSWER]
['Q23470322', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?o ) WHERE { resource:Q23470322 property:P702 ?w . ?w rdf:type ontology:Q863908 }
1
action count
action filter_type
action find
entity 5,10-methylenetetrahydrofolate reductase    CT1368
relation encoded by
type nucleic acid sequence
['5,10-methylenetetrahydrofolate reductase    CT1368', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?w ) AS ?o ) WHERE { resource:5,10-methylenetetrahydrofolate_reductase____CT1368 property:encoded_by ?w . ?w rdf:type ontology:nucleic_acid_sequence }
[]