Simple Question (Direct)
Simple Question
Q23535760
P680
Q44424
USER
Which the chemical bonds that represents the molecular function of NADH dehydrogenase subunit B    Moth_0978 ?
(Q23535760,P680,c(Q44424))
action filter_type
action find
entity Q23535760
relation P680
type Q44424
['Q23535760', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?z WHERE { resource:Q23535760 property:P680 ?z . ?z rdf:type ontology:Q44424 }
NADH dehydrogenase subunit B    Moth_0978
action filter_type
action find
entity NADH dehydrogenase subunit B    Moth_0978
relation molecular function
type chemical bond
['NADH dehydrogenase subunit B    Moth_0978', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?z WHERE { resource:NADH_dehydrogenase_subunit_B____Moth_0978 property:molecular_function ?z . ?z rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380 Q14358439
SYSTEM
metal ion binding, iron ion binding
Q13667380 Q14358439
(Q23535760,P680,c(Q44424))
action filter_type
action find
entity Q23535760
relation P680
type Q44424
Represents the [ANSWERS]
['Q23535760', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?z WHERE { resource:Q23535760 property:P680 ?z . ?z rdf:type ontology:Q44424 }
metal ion binding iron ion binding
Represents the metal ion binding and iron ion binding
metal ion binding iron ion binding
action filter_type
action find
entity NADH dehydrogenase subunit B    Moth_0978
relation molecular function
type chemical bond
['NADH dehydrogenase subunit B    Moth_0978', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?z WHERE { resource:NADH_dehydrogenase_subunit_B____Moth_0978 property:molecular_function ?z . ?z rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23535760
P681
Q5058355
USER
Which is the cell component of NADH dehydrogenase subunit B    Moth_0978 ?
(Q23535760,P681,c(Q5058355))
action filter_type
action find
entity Q23535760
relation P681
type Q5058355
['Q23535760', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { resource:Q23535760 property:P681 ?c . ?c rdf:type ontology:Q5058355 }
NADH dehydrogenase subunit B    Moth_0978
action filter_type
action find
entity NADH dehydrogenase subunit B    Moth_0978
relation cell component
type cellular component
['NADH dehydrogenase subunit B    Moth_0978', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { resource:NADH_dehydrogenase_subunit_B____Moth_0978 property:cell_component ?c . ?c rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q23535760,P681,c(Q5058355))
action filter_type
action find
entity Q23535760
relation P681
type Q5058355
The [ANSWER] is the cell component of NADH dehydrogenase subunit B Moth_0978
['Q23535760', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { resource:Q23535760 property:P681 ?c . ?c rdf:type ontology:Q5058355 }
plasma membrane
The plasma membrane is the cell component of NADH dehydrogenase subunit B Moth_0978
plasma membrane
action filter_type
action find
entity NADH dehydrogenase subunit B    Moth_0978
relation cell component
type cellular component
['NADH dehydrogenase subunit B    Moth_0978', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { resource:NADH_dehydrogenase_subunit_B____Moth_0978 property:cell_component ?c . ?c rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23535760
P703
Q16521
USER
Which taxon is NADH dehydrogenase subunit B    Moth_0978 found in ?
(Q23535760,P703,c(Q16521))
action filter_type
action find
entity Q23535760
relation P703
type Q16521
['Q23535760', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:Q16521 . resource:Q23535760 property:P703 ?k }
NADH dehydrogenase subunit B    Moth_0978
action filter_type
action find
entity NADH dehydrogenase subunit B    Moth_0978
relation found in taxon
type taxon
['NADH dehydrogenase subunit B    Moth_0978', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:taxon . resource:NADH_dehydrogenase_subunit_B____Moth_0978 property:found_in_taxon ?k }
[]
taxon
Q21398186
SYSTEM
Moorella thermoacetica ATCC 39073
Q21398186
(Q23535760,P703,c(Q16521))
action filter_type
action find
entity Q23535760
relation P703
type Q16521
[ANSWER] is NADH dehydrogenase subunit B Moth_0978 found in
['Q23535760', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:Q16521 . resource:Q23535760 property:P703 ?k }
Moorella thermoacetica ATCC 39073
Moorella thermoacetica ATCC 39073 is NADH dehydrogenase subunit B Moth_0978 found in
Moorella thermoacetica ATCC 39073
action filter_type
action find
entity NADH dehydrogenase subunit B    Moth_0978
relation found in taxon
type taxon
['NADH dehydrogenase subunit B    Moth_0978', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:taxon . resource:NADH_dehydrogenase_subunit_B____Moth_0978 property:found_in_taxon ?k }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23535760
P682
Q1057
USER
Which metabolic process is that nutrient involved in ?
(Q21398186,P682,c(Q1057))
action filter_type
action find
entity Q23535760
relation P682
type Q1057
['Q21398186', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?o WHERE { resource:Q23535760 property:P682 ?o . ?o rdf:type ontology:Q1057 }
NADH dehydrogenase subunit B    Moth_0978
action filter_type
action find
entity NADH dehydrogenase subunit B    Moth_0978
relation biological process
type metabolic process
['Moorella thermoacetica ATCC 39073', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?o WHERE { resource:NADH_dehydrogenase_subunit_B____Moth_0978 property:biological_process ?o . ?o rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349764
SYSTEM
oxidation-reduction process
Q14349764
(Q21398186,P682,c(Q1057))
action filter_type
action find
entity Q23535760
relation P682
type Q1057
That nutrient is an [ANSWER]
['Q21398186', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?o WHERE { resource:Q23535760 property:P682 ?o . ?o rdf:type ontology:Q1057 }
oxidation-reduction process
That nutrient is an oxidation-reduction process
oxidation-reduction process
action filter_type
action find
entity NADH dehydrogenase subunit B    Moth_0978
relation biological process
type metabolic process
['Moorella thermoacetica ATCC 39073', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?o WHERE { resource:NADH_dehydrogenase_subunit_B____Moth_0978 property:biological_process ?o . ?o rdf:type ontology:metabolic_process }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21120634
Q5058355
USER
And what about interleukin-12 complex?
(Q21120634,P361,c(Q5058355))
action filter_type
action find
entity Q21120634
relation P361
type Q5058355
['Q21120634', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?k WHERE { resource:Q21120634 property:P361 ?k . ?k rdf:type ontology:Q5058355 }
interleukin-12 complex
action filter_type
action find
entity interleukin-12 complex
relation part of
type cellular component
['interleukin-12 complex', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?k WHERE { resource:interleukin-12_complex property:part_of ?k . ?k rdf:type ontology:cellular_component }
[]
cellular component
Q2914458
SYSTEM
extracellular space
Q2914458
(Q21120634,P361,c(Q5058355))
action filter_type
action find
entity Q21120634
relation P361
type Q5058355
[ANSWER]
['Q21120634', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?k WHERE { resource:Q21120634 property:P361 ?k . ?k rdf:type ontology:Q5058355 }
extracellular space
extracellular space
action filter_type
action find
entity interleukin-12 complex
relation part of
type cellular component
['interleukin-12 complex', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?k WHERE { resource:interleukin-12_complex property:part_of ?k . ?k rdf:type ontology:cellular_component }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q2914458 Q14906145
P681
Q181394
USER
Is that one a cell component of Dystroglycan ?
(Q14906145,P681,Q2914458)
action is_in
entity Q2914458
action find
entity Q14906145
relation P681
['Q14906145', 'P681', 'Q2914458']
ASK WHERE { resource:Q14906145 property:P681 resource:Q2914458 }
extracellular space Dystroglycan
action is_in
entity extracellular space
action find
entity Dystroglycan
relation cell component
['Dystroglycan', 'cell component', 'extracellular space']
ASK WHERE { resource:Dystroglycan property:cell_component resource:extracellular_space }
[]
nutrient
SYSTEM
YES
(Q14906145,P681,Q2914458)
action is_in
entity Q2914458
action find
entity Q14906145
relation P681
[ANSWER]
['Q14906145', 'P681', 'Q2914458']
ASK WHERE { resource:Q14906145 property:P681 resource:Q2914458 }
Yes
action is_in
entity extracellular space
action find
entity Dystroglycan
relation cell component
['Dystroglycan', 'cell component', 'extracellular space']
ASK WHERE { resource:Dystroglycan property:cell_component resource:extracellular_space }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q14878067
Q5058355
USER
And what about organelle membrane?
(Q14878067,P361,c(Q5058355))
action filter_type
action find
entity Q14878067
relation P361
type Q5058355
['Q14878067', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?q WHERE { resource:Q14878067 property:P361 ?q . ?q rdf:type ontology:Q5058355 }
organelle membrane
action filter_type
action find
entity organelle membrane
relation part of
type cellular component
['organelle membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?q WHERE { resource:organelle_membrane property:part_of ?q . ?q rdf:type ontology:cellular_component }
[]
cellular component
Q21423046
SYSTEM
membrane-bounded organelle
Q21423046
(Q14878067,P361,c(Q5058355))
action filter_type
action find
entity Q14878067
relation P361
type Q5058355
[ANSWER]
['Q14878067', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?q WHERE { resource:Q14878067 property:P361 ?q . ?q rdf:type ontology:Q5058355 }
membrane-bounded organelle
membrane-bounded organelle
action filter_type
action find
entity organelle membrane
relation part of
type cellular component
['organelle membrane', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?q WHERE { resource:organelle_membrane property:part_of ?q . ?q rdf:type ontology:cellular_component }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21423046
P361
Q5058355
USER
What is a part of that one ?
(c(Q5058355),P361,Q21423046)
action filter_type
action find_reverse
entity Q21423046
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', 'Q21423046']
SELECT DISTINCT ?n WHERE { ?n property:P361 resource:Q21423046 . ?n rdf:type ontology:Q5058355 }
membrane-bounded organelle
action filter_type
action find_reverse
entity membrane-bounded organelle
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'membrane-bounded organelle']
SELECT DISTINCT ?n WHERE { ?n property:part_of resource:membrane-bounded_organelle . ?n rdf:type ontology:cellular_component }
[]
cellular component
Q14878067
SYSTEM
organelle membrane
Q14878067
(c(Q5058355),P361,Q21423046)
action filter_type
action find_reverse
entity Q21423046
relation P361
type Q5058355
A part of that one is the [ANSWER]
[{'concept': 'Q5058355'}, 'P361', 'Q21423046']
SELECT DISTINCT ?n WHERE { ?n property:P361 resource:Q21423046 . ?n rdf:type ontology:Q5058355 }
organelle membrane
A part of that one is the organelle membrane
organelle membrane
action filter_type
action find_reverse
entity membrane-bounded organelle
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'membrane-bounded organelle']
SELECT DISTINCT ?n WHERE { ?n property:part_of resource:membrane-bounded_organelle . ?n rdf:type ontology:cellular_component }
[]