Simple Question (Direct)
Simple Question
Q23051621
P703
Q631147
USER
Which taxon is ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699 a part of ?
(Q23051621,P703,c(Q631147))
action filter_type
action find
entity Q23051621
relation P703
type Q631147
['Q23051621', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?b WHERE { resource:Q23051621 property:P703 ?b . ?b rdf:type ontology:Q631147 }
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
action filter_type
action find
entity ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
relation found in taxon
type infraspecific name
['ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?b WHERE { resource:ABC_sulfate/thiosulfate_transporter,_inner_membrane_subunit_CysW____RSP_3699 property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102953
SYSTEM
Rhodobacter sphaeroides 2.4.1
Q21102953
(Q23051621,P703,c(Q631147))
action filter_type
action find
entity Q23051621
relation P703
type Q631147
[ANSWER] is ABC sulfate/thiosulfate transporter, inner membrane subunit CysW RSP_3699 a part of
['Q23051621', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?b WHERE { resource:Q23051621 property:P703 ?b . ?b rdf:type ontology:Q631147 }
Rhodobacter sphaeroides 2.4.1
Rhodobacter sphaeroides 2.4.1 is ABC sulfate/thiosulfate transporter, inner membrane subunit CysW RSP_3699 a part of
Rhodobacter sphaeroides 2.4.1
action filter_type
action find
entity ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
relation found in taxon
type infraspecific name
['ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?b WHERE { resource:ABC_sulfate/thiosulfate_transporter,_inner_membrane_subunit_CysW____RSP_3699 property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23051621
P688
Q863908
USER
Which nucleic acid sequence encodes ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699 ?
(c(Q863908),P688,Q23051621)
action filter_type
action find_reverse
entity Q23051621
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23051621']
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:Q863908 . ?r property:P688 resource:Q23051621 }
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
action filter_type
action find_reverse
entity ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699']
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:nucleic_acid_sequence . ?r property:encodes resource:ABC_sulfate/thiosulfate_transporter,_inner_membrane_subunit_CysW____RSP_3699 }
[]
nucleic acid sequence
Q23029321
SYSTEM
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
Q23029321
(c(Q863908),P688,Q23051621)
action filter_type
action find_reverse
entity Q23051621
relation P688
type Q863908
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW RSP 3699 encodes ABC sulfate/thiosulfate transporter, inner membrane subunit CysW RSP_3699
[{'concept': 'Q863908'}, 'P688', 'Q23051621']
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:Q863908 . ?r property:P688 resource:Q23051621 }
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW RSP 3699 encodes ABC sulfate/thiosulfate transporter, inner membrane subunit CysW RSP_3699
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
action filter_type
action find_reverse
entity ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699']
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:nucleic_acid_sequence . ?r property:encodes resource:ABC_sulfate/thiosulfate_transporter,_inner_membrane_subunit_CysW____RSP_3699 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23051621
P681
Q15989253
USER
Which is the part that is a component of ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699 ?
(Q23051621,P681,c(Q15989253))
action filter_type
action find
entity Q23051621
relation P681
type Q15989253
['Q23051621', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?q WHERE { resource:Q23051621 property:P681 ?q . ?q rdf:type ontology:Q15989253 }
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
action filter_type
action find
entity ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
relation cell component
type part
['ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?q WHERE { resource:ABC_sulfate/thiosulfate_transporter,_inner_membrane_subunit_CysW____RSP_3699 property:cell_component ?q . ?q rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q23051621,P681,c(Q15989253))
action filter_type
action find
entity Q23051621
relation P681
type Q15989253
[ANSWER] is the part that is a component of ABC sulfate/thiosulfate transporter, inner [ANSWER] subunit CysW RSP_3699
['Q23051621', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?q WHERE { resource:Q23051621 property:P681 ?q . ?q rdf:type ontology:Q15989253 }
membrane
Membrane is the part that is a component of ABC sulfate/thiosulfate transporter, inner membrane subunit CysW RSP_3699
membrane
action filter_type
action find
entity ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
relation cell component
type part
['ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?q WHERE { resource:ABC_sulfate/thiosulfate_transporter,_inner_membrane_subunit_CysW____RSP_3699 property:cell_component ?q . ?q rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23471156
Q15989253
USER
And how about succinate dehydrogenase, cytochrome subunit    CT2268?
(Q23471156,P681,c(Q15989253))
action filter_type
action find
entity Q23471156
relation P681
type Q15989253
['Q23471156', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?k WHERE { resource:Q23471156 property:P681 ?k . ?k rdf:type ontology:Q15989253 }
succinate dehydrogenase, cytochrome subunit    CT2268
action filter_type
action find
entity succinate dehydrogenase, cytochrome subunit    CT2268
relation cell component
type part
['succinate dehydrogenase, cytochrome subunit    CT2268', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?k WHERE { resource:succinate_dehydrogenase,_cytochrome_subunit____CT2268 property:cell_component ?k . ?k rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q23471156,P681,c(Q15989253))
action filter_type
action find
entity Q23471156
relation P681
type Q15989253
[ANSWER]
['Q23471156', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?k WHERE { resource:Q23471156 property:P681 ?k . ?k rdf:type ontology:Q15989253 }
membrane
membrane
action filter_type
action find
entity succinate dehydrogenase, cytochrome subunit    CT2268
relation cell component
type part
['succinate dehydrogenase, cytochrome subunit    CT2268', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?k WHERE { resource:succinate_dehydrogenase,_cytochrome_subunit____CT2268 property:cell_component ?k . ?k rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q14877492
Q5058355
USER
And also tell me about lateral loop?
(Q14877492,P361,c(Q5058355))
action filter_type
action find
entity Q14877492
relation P361
type Q5058355
['Q14877492', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?b WHERE { resource:Q14877492 property:P361 ?b . ?b rdf:type ontology:Q5058355 }
lateral loop
action filter_type
action find
entity lateral loop
relation part of
type cellular component
['lateral loop', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?b WHERE { resource:lateral_loop property:part_of ?b . ?b rdf:type ontology:cellular_component }
[]
cellular component
Q14863372
SYSTEM
myelin sheath
Q14863372
(Q14877492,P361,c(Q5058355))
action filter_type
action find
entity Q14877492
relation P361
type Q5058355
[ANSWER]
['Q14877492', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?b WHERE { resource:Q14877492 property:P361 ?b . ?b rdf:type ontology:Q5058355 }
myelin sheath
myelin sheath
action filter_type
action find
entity lateral loop
relation part of
type cellular component
['lateral loop', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?b WHERE { resource:lateral_loop property:part_of ?b . ?b rdf:type ontology:cellular_component }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type|Indirect
P361
Q5058355 Q5058355 Q15989253
USER
How many cellular components are less number of cellular components or parts a component of than that cellular component ?
(c(Q5058355)|c(Q15989253),P361,c(Q5058355))
action count
action less
action union
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q15989253
action count
action filter_multi_types
action find_reverse
entity Q14863372
relation P361
type Q5058355
type Q15989253
[[{'concept': 'Q5058355'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?l ) WHERE { { SELECT DISTINCT ( COUNT ( ?r ) AS ?q ) ?h WHERE { VALUES ( ?p ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } . ?r rdf:type ?p } GROUP BY ?h } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?i ) WHERE { ?k property:P361 resource:Q14863372 . { ?k rdf:type ?a . VALUES ( ?a ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } } } } . FILTER ( ?q < ?i ) }
action count
action less
action union
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
action find_reverse_tuple_counts
relation part of
type cellular component
type part
action count
action filter_multi_types
action find_reverse
entity myelin sheath
relation part of
type cellular component
type part
[[{'concept': 'cellular component'}, {'concept': 'part'}], 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?l ) WHERE { { SELECT DISTINCT ( COUNT ( ?r ) AS ?q ) ?h WHERE { VALUES ( ?p ) { ( ontology:cellular_component ) ( ontology:part ) } . ?r rdf:type ?p } GROUP BY ?h } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?i ) WHERE { ?k property:part_of resource:myelin_sheath . { ?k rdf:type ?a . VALUES ( ?a ) { ( ontology:cellular_component ) ( ontology:part ) } } } } . FILTER ( ?q < ?i ) }
[]
cellular component cellular component part
SYSTEM
83
Q22329450 Q15320191 Q14912978 Q14864171 Q14876131 Q14878067 Q1604780 Q22327994 Q22327622 Q14860843 Q22327686 Q22327683 Q22330482 Q671136 Q22326188 Q22330431 Q189094 Q24576572 Q3824358 Q22329021 Q14864391 Q14864390 Q22328085 Q21095183 Q14905221 Q21199358 Q22327411 Q22327418 Q22329159 Q22329397 Q14864382 Q14353100 Q22327884 Q21423046 Q47263 Q22327652 Q22329848 Q180436 Q22329846 Q22329160 Q24570682 Q22330051 Q22327498 Q14911512 Q14819352 Q22327494 Q22327889 Q14762605 Q14864266 Q21750262 Q21198990 Q776995 Q22329401 Q24570673 Q14349538 Q22328884 Q22329076 Q22330231 Q5419646 Q21126899 Q22325459 Q22327714 Q22327805 Q21107481 Q22327505 Q21102478 Q22327502 Q22327500 Q138639 Q22329104 Q21095308 Q14864857 Q1065756 Q79927 Q180951 Q14864520 Q29548 Q22328105 Q14860546 Q14860540 Q14864866 Q6414172 Q193825
(c(Q5058355)|c(Q15989253),P361,c(Q5058355))
action count
action less
action union
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q5058355
action find_reverse_tuple_counts
relation P361
type Q5058355
type Q15989253
action count
action filter_multi_types
action find_reverse
entity Q14863372
relation P361
type Q5058355
type Q15989253
[ANSWER]
[[{'concept': 'Q5058355'}, {'concept': 'Q15989253'}], 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?l ) WHERE { { SELECT DISTINCT ( COUNT ( ?r ) AS ?q ) ?h WHERE { VALUES ( ?p ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } . ?r rdf:type ?p } GROUP BY ?h } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?i ) WHERE { ?k property:P361 resource:Q14863372 . { ?k rdf:type ?a . VALUES ( ?a ) { ( ontology:Q5058355 ) ( ontology:Q15989253 ) } } } } . FILTER ( ?q < ?i ) }
lateral part of cell synaptic cleft mitochondrial nucleoid cell periphery compact myelin organelle membrane hemidesmosome rhoptry side of membrane nuclear outer membrane prospore membrane eisosome ventral disc supernumerary microtubule array synaptic vesicle aster unencapsulated part of cell cell surface presynaptic endosome membrane intracellular apical complex intracellular organelle synaptic vesicle membrane external encapsulating structure dendritic spine head symbiont-containing vacuole membrane bacterial nucleoid extracellular space of host host ventral disc microtubule array cluster of actin-based cell projections presynaptic active zone cell projection cellular bud membrane-bounded organelle chloroplast whole membrane icosahedral viral capsid, collar cilium icosahedral viral capsid, neck ventral disc overlap zone spine apparatus membrane dinoflagellate hypocone postsynaptic endocytic zone stereocilium respiratory chain postsynaptic endosome cell trailing edge midbody cell-substrate junction cell division site periplasmic space neuromuscular junction pellicle postsynaptic endosome membrane apical part of cell organellar ribosome plastid nucleoid dinoflagellate epicone excitatory synapse cell tip sperm individualization complex coated membrane photosynthetic membrane site of polarized growth presynaptic endosome other organism cell presynaptic active zone cytoplasmic component presynaptic endocytic zone peroxisome germ tube retromer complex cell leading edge melanosome endoplasmic reticulum chromatin extrinsic component of membrane plasma membrane cell septum basal part of cell clathrin-coated pit cell body kinocilium extracellular matrix
83
action count
action less
action union
action find_reverse_tuple_counts
relation part of
type cellular component
type cellular component
action find_reverse_tuple_counts
relation part of
type cellular component
type part
action count
action filter_multi_types
action find_reverse
entity myelin sheath
relation part of
type cellular component
type part
[[{'concept': 'cellular component'}, {'concept': 'part'}], 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ( COUNT ( ?h ) AS ?l ) WHERE { { SELECT DISTINCT ( COUNT ( ?r ) AS ?q ) ?h WHERE { VALUES ( ?p ) { ( ontology:cellular_component ) ( ontology:part ) } . ?r rdf:type ?p } GROUP BY ?h } . { SELECT DISTINCT ( COUNT ( ?k ) AS ?i ) WHERE { ?k property:part_of resource:myelin_sheath . { ?k rdf:type ?a . VALUES ( ?a ) { ( ontology:cellular_component ) ( ontology:part ) } } } } . FILTER ( ?q < ?i ) }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23029321 Q18034724
P702
Q181394
USER
How many nutrients are encoded by ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699 or HEPH ?
(c(Q181394),P702,Q23029321) (c(Q181394),P702,Q18034724)
action count
action union
action filter_type
action find_reverse
entity Q23029321
relation P702
type Q181394
action filter_type
action find_reverse
entity Q18034724
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23029321'] [{'concept': 'Q181394'}, 'P702', 'Q18034724']
SELECT DISTINCT ( COUNT ( ?k ) AS ?n ) WHERE { { ?k property:P702 resource:Q23029321 . ?k rdf:type ontology:Q181394 } UNION { ?k rdf:type ontology:Q181394 . ?k property:P702 resource:Q18034724 } }
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699 HEPH
action count
action union
action filter_type
action find_reverse
entity ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
relation encoded by
type nutrient
action filter_type
action find_reverse
entity HEPH
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699'] [{'concept': 'nutrient'}, 'encoded by', 'HEPH']
SELECT DISTINCT ( COUNT ( ?k ) AS ?n ) WHERE { { ?k property:encoded_by resource:ABC_sulfate/thiosulfate_transporter,_inner_membrane_subunit_CysW____RSP_3699 . ?k rdf:type ontology:nutrient } UNION { ?k rdf:type ontology:nutrient . ?k property:encoded_by resource:HEPH } }
[]
nutrient
SYSTEM
2
Q23051621 Q22676503
(c(Q181394),P702,Q23029321) (c(Q181394),P702,Q18034724)
action count
action union
action filter_type
action find_reverse
entity Q23029321
relation P702
type Q181394
action filter_type
action find_reverse
entity Q18034724
relation P702
type Q181394
[ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q23029321'] [{'concept': 'Q181394'}, 'P702', 'Q18034724']
SELECT DISTINCT ( COUNT ( ?k ) AS ?n ) WHERE { { ?k property:P702 resource:Q23029321 . ?k rdf:type ontology:Q181394 } UNION { ?k rdf:type ontology:Q181394 . ?k property:P702 resource:Q18034724 } }
ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699 Hephaestin
2
action count
action union
action filter_type
action find_reverse
entity ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699
relation encoded by
type nutrient
action filter_type
action find_reverse
entity HEPH
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'ABC sulfate/thiosulfate transporter, inner membrane subunit CysW    RSP_3699'] [{'concept': 'nutrient'}, 'encoded by', 'HEPH']
SELECT DISTINCT ( COUNT ( ?k ) AS ?n ) WHERE { { ?k property:encoded_by resource:ABC_sulfate/thiosulfate_transporter,_inner_membrane_subunit_CysW____RSP_3699 . ?k rdf:type ontology:nutrient } UNION { ?k rdf:type ontology:nutrient . ?k property:encoded_by resource:HEPH } }
[]