Simple Question (Direct)
Simple Question
Q21984762
P702
Q863908
USER
What encodes Cyclin-dependent kinase 11B ?
(Q21984762,P702,c(Q863908))
action filter_type
action find
entity Q21984762
relation P702
type Q863908
['Q21984762', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:Q863908 . resource:Q21984762 property:P702 ?r }
Cyclin-dependent kinase 11B
action filter_type
action find
entity Cyclin-dependent kinase 11B
relation encoded by
type nucleic acid sequence
['Cyclin-dependent kinase 11B', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:nucleic_acid_sequence . resource:Cyclin-dependent_kinase_11B property:encoded_by ?r }
[]
nucleic acid sequence
Q18248240
SYSTEM
Cdk11b
Q18248240
(Q21984762,P702,c(Q863908))
action filter_type
action find
entity Q21984762
relation P702
type Q863908
[ANSWER] encodes Cyclin-dependent kinase 11B
['Q21984762', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:Q863908 . resource:Q21984762 property:P702 ?r }
Cdk11b
Cdk11b encodes Cyclin-dependent kinase 11B
Cdk11b
action filter_type
action find
entity Cyclin-dependent kinase 11B
relation encoded by
type nucleic acid sequence
['Cyclin-dependent kinase 11B', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?r WHERE { ?r rdf:type ontology:nucleic_acid_sequence . resource:Cyclin-dependent_kinase_11B property:encoded_by ?r }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21984762
P681
Q15989253
USER
Which parts are the components of Cyclin-dependent kinase 11B ?
(Q21984762,P681,c(Q15989253))
action filter_type
action find
entity Q21984762
relation P681
type Q15989253
['Q21984762', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q21984762 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
Cyclin-dependent kinase 11B
action filter_type
action find
entity Cyclin-dependent kinase 11B
relation cell component
type part
['Cyclin-dependent kinase 11B', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:Cyclin-dependent_kinase_11B property:cell_component ?s . ?s rdf:type ontology:part }
[]
part
Q79899 Q40260
SYSTEM
cytoplasm, nucleus
Q79899 Q40260
(Q21984762,P681,c(Q15989253))
action filter_type
action find
entity Q21984762
relation P681
type Q15989253
[ANSWERS] are the components of Cyclin-dependent kinase 11B
['Q21984762', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?s WHERE { resource:Q21984762 property:P681 ?s . ?s rdf:type ontology:Q15989253 }
cytoplasm nucleus
Cytoplasm and nucleus are the components of Cyclin-dependent kinase 11B
cytoplasm nucleus
action filter_type
action find
entity Cyclin-dependent kinase 11B
relation cell component
type part
['Cyclin-dependent kinase 11B', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?s WHERE { resource:Cyclin-dependent_kinase_11B property:cell_component ?s . ?s rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18248240
P684
Q863908
USER
What is the name of the species that has Cdk11b as its orthologous gene ?
(c(Q863908),P684,Q18248240)
action filter_type
action find
entity Q18248240
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18248240']
SELECT DISTINCT ?q WHERE { resource:Q18248240 property:P684 ?q . ?q rdf:type ontology:Q863908 }
Cdk11b
action filter_type
action find
entity Cdk11b
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Cdk11b']
SELECT DISTINCT ?q WHERE { resource:Cdk11b property:ortholog ?q . ?q rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18061508
SYSTEM
CDK11A
Q18061508
(c(Q863908),P684,Q18248240)
action filter_type
action find
entity Q18248240
relation P684
type Q863908
The name of the species that has Cdk 11b as its orthologous gene is [ANSWER]
[{'concept': 'Q863908'}, 'P684', 'Q18248240']
SELECT DISTINCT ?q WHERE { resource:Q18248240 property:P684 ?q . ?q rdf:type ontology:Q863908 }
CDK11A
The name of the species that has Cdk 11b as its orthologous gene is CDK11A
CDK11A
action filter_type
action find
entity Cdk11b
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Cdk11b']
SELECT DISTINCT ?q WHERE { resource:Cdk11b property:ortholog ?q . ?q rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18061508
P688
Q181394
USER
Which nutrient is encoded by that nucleic acid sequence ?
(Q18061508,P688,c(Q181394))
action filter_type
action find
entity Q18061508
relation P688
type Q181394
['Q18061508', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?b WHERE { resource:Q18061508 property:P688 ?b . ?b rdf:type ontology:Q181394 }
CDK11A
action filter_type
action find
entity CDK11A
relation encodes
type nutrient
['CDK11A', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?b WHERE { resource:CDK11A property:encodes ?b . ?b rdf:type ontology:nutrient }
[]
nutrient
Q21173388
SYSTEM
Cyclin-dependent kinase 11A
Q21173388
(Q18061508,P688,c(Q181394))
action filter_type
action find
entity Q18061508
relation P688
type Q181394
The [ANSWER] is encoded by that nucleic acid sequence
['Q18061508', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?b WHERE { resource:Q18061508 property:P688 ?b . ?b rdf:type ontology:Q181394 }
Cyclin-dependent kinase 11A
The Cyclin-dependent kinase 11A is encoded by that nucleic acid sequence
Cyclin-dependent kinase 11A
action filter_type
action find
entity CDK11A
relation encodes
type nutrient
['CDK11A', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?b WHERE { resource:CDK11A property:encodes ?b . ?b rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18061508
P703
Q16521
USER
Which taxon is that nucleic acid sequence found in ?
(Q21173388,P703,c(Q16521))
action filter_type
action find
entity Q18061508
relation P703
type Q16521
['Q21173388', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?x WHERE { resource:Q18061508 property:P703 ?x . ?x rdf:type ontology:Q16521 }
CDK11A
action filter_type
action find
entity CDK11A
relation found in taxon
type taxon
['Cyclin-dependent kinase 11A', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?x WHERE { resource:CDK11A property:found_in_taxon ?x . ?x rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21173388,P703,c(Q16521))
action filter_type
action find
entity Q18061508
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
['Q21173388', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?x WHERE { resource:Q18061508 property:P703 ?x . ?x rdf:type ontology:Q16521 }
Homo sapiens
That nucleic acid sequence is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity CDK11A
relation found in taxon
type taxon
['Cyclin-dependent kinase 11A', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?x WHERE { resource:CDK11A property:found_in_taxon ?x . ?x rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q15978631 Q21136867
P703
Q181394
USER
Is Zinc finger protein 319 found in that taxon ?
(Q21136867,P703,Q15978631)
action is_in
entity Q15978631
action find
entity Q21136867
relation P703
['Q21136867', 'P703', 'Q15978631']
ASK WHERE { resource:Q21136867 property:P703 resource:Q15978631 }
Homo sapiens Zinc finger protein 319
action is_in
entity Homo sapiens
action find
entity Zinc finger protein 319
relation found in taxon
['Zinc finger protein 319', 'found in taxon', 'Homo sapiens']
ASK WHERE { resource:Zinc_finger_protein_319 property:found_in_taxon resource:Homo_sapiens }
[]
nutrient
SYSTEM
YES
(Q21136867,P703,Q15978631)
action is_in
entity Q15978631
action find
entity Q21136867
relation P703
[ANSWER]
['Q21136867', 'P703', 'Q15978631']
ASK WHERE { resource:Q21136867 property:P703 resource:Q15978631 }
Yes
action is_in
entity Homo sapiens
action find
entity Zinc finger protein 319
relation found in taxon
['Zinc finger protein 319', 'found in taxon', 'Homo sapiens']
ASK WHERE { resource:Zinc_finger_protein_319 property:found_in_taxon resource:Homo_sapiens }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type
Q15226539
P566
Q82799 Q16521
USER
Which names are a basionyms of more number of taxons than Atriplex verrucifera ?
(c(Q16521),P566,c(Q82799))
action greater
action find_reverse_tuple_counts
relation P566
type Q82799
type Q16521
action count
action filter_type
action find
entity Q15226539
relation P566
type Q82799
[{'concept': 'Q16521'}, 'P566', {'concept': 'Q82799'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?a ) WHERE { ?x property:P566 ?b . ?b rdf:type ontology:Q82799 . ?x rdf:type ontology:Q16521 } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?g ) AS ?s ) WHERE { resource:Q15226539 property:P566 ?g . ?g rdf:type ontology:Q82799 } } . FILTER ( ?a > ?s ) }
Atriplex verrucifera
action greater
action find_reverse_tuple_counts
relation basionym
type name
type taxon
action count
action filter_type
action find
entity Atriplex verrucifera
relation basionym
type name
[{'concept': 'taxon'}, 'basionym', {'concept': 'name'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?a ) WHERE { ?x property:basionym ?b . ?b rdf:type ontology:name . ?x rdf:type ontology:taxon } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?g ) AS ?s ) WHERE { resource:Atriplex_verrucifera property:basionym ?g . ?g rdf:type ontology:name } } . FILTER ( ?a > ?s ) }
[]
name taxon
Q11079289 Q17244388
SYSTEM
Salsola brachiata, Atriplex portulacoides
Q11079289 Q17244388
(c(Q16521),P566,c(Q82799))
action greater
action find_reverse_tuple_counts
relation P566
type Q82799
type Q16521
action count
action filter_type
action find
entity Q15226539
relation P566
type Q82799
[ANSWERS] are a basionyms of more number of taxons than Atriplex verrucifera
[{'concept': 'Q16521'}, 'P566', {'concept': 'Q82799'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?a ) WHERE { ?x property:P566 ?b . ?b rdf:type ontology:Q82799 . ?x rdf:type ontology:Q16521 } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?g ) AS ?s ) WHERE { resource:Q15226539 property:P566 ?g . ?g rdf:type ontology:Q82799 } } . FILTER ( ?a > ?s ) }
Salsola brachiata Atriplex portulacoides
Salsola brachiata and Atriplex portulacoides are a basionyms of more number of taxons than Atriplex verrucifera
Salsola brachiata Atriplex portulacoides
action greater
action find_reverse_tuple_counts
relation basionym
type name
type taxon
action count
action filter_type
action find
entity Atriplex verrucifera
relation basionym
type name
[{'concept': 'taxon'}, 'basionym', {'concept': 'name'}]
SELECT DISTINCT ?b WHERE { { SELECT DISTINCT ?b ( COUNT ( ?x ) AS ?a ) WHERE { ?x property:basionym ?b . ?b rdf:type ontology:name . ?x rdf:type ontology:taxon } GROUP BY ?b } . { SELECT DISTINCT ( COUNT ( ?g ) AS ?s ) WHERE { resource:Atriplex_verrucifera property:basionym ?g . ?g rdf:type ontology:name } } . FILTER ( ?a > ?s ) }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Incomplete
Q7116174
P566
Q82799 Q16521
USER
And also tell me about Oxytheca parishii?
(c(Q16521),P566,c(Q82799))
action greater
action find_reverse_tuple_counts
relation P566
type Q82799
type Q16521
action count
action filter_type
action find
entity Q7116174
relation P566
type Q82799
[{'concept': 'Q16521'}, 'P566', {'concept': 'Q82799'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?e ) WHERE { resource:Q7116174 property:P566 ?m . ?m rdf:type ontology:Q82799 } } . FILTER ( ?a > ?e ) . { SELECT DISTINCT ?p ( COUNT ( ?j ) AS ?a ) WHERE { ?j property:P566 ?p . ?p rdf:type ontology:Q82799 . ?j rdf:type ontology:Q16521 } GROUP BY ?p } }
Oxytheca parishii
action greater
action find_reverse_tuple_counts
relation basionym
type name
type taxon
action count
action filter_type
action find
entity Oxytheca parishii
relation basionym
type name
[{'concept': 'taxon'}, 'basionym', {'concept': 'name'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?e ) WHERE { resource:Oxytheca_parishii property:basionym ?m . ?m rdf:type ontology:name } } . FILTER ( ?a > ?e ) . { SELECT DISTINCT ?p ( COUNT ( ?j ) AS ?a ) WHERE { ?j property:basionym ?p . ?p rdf:type ontology:name . ?j rdf:type ontology:taxon } GROUP BY ?p } }
[]
name taxon
Q11079289 Q17244388
SYSTEM
Salsola brachiata, Atriplex portulacoides
Q11079289 Q17244388
(c(Q16521),P566,c(Q82799))
action greater
action find_reverse_tuple_counts
relation P566
type Q82799
type Q16521
action count
action filter_type
action find
entity Q7116174
relation P566
type Q82799
[ANSWERS]
[{'concept': 'Q16521'}, 'P566', {'concept': 'Q82799'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?e ) WHERE { resource:Q7116174 property:P566 ?m . ?m rdf:type ontology:Q82799 } } . FILTER ( ?a > ?e ) . { SELECT DISTINCT ?p ( COUNT ( ?j ) AS ?a ) WHERE { ?j property:P566 ?p . ?p rdf:type ontology:Q82799 . ?j rdf:type ontology:Q16521 } GROUP BY ?p } }
Salsola brachiata Atriplex portulacoides
Salsola brachiata Atriplex portulacoides
action greater
action find_reverse_tuple_counts
relation basionym
type name
type taxon
action count
action filter_type
action find
entity Oxytheca parishii
relation basionym
type name
[{'concept': 'taxon'}, 'basionym', {'concept': 'name'}]
SELECT DISTINCT ?p WHERE { { SELECT DISTINCT ( COUNT ( ?m ) AS ?e ) WHERE { resource:Oxytheca_parishii property:basionym ?m . ?m rdf:type ontology:name } } . FILTER ( ?a > ?e ) . { SELECT DISTINCT ?p ( COUNT ( ?j ) AS ?a ) WHERE { ?j property:basionym ?p . ?p rdf:type ontology:name . ?j rdf:type ontology:taxon } GROUP BY ?p } }
[]