Simple Question (Direct)
Simple Question
Q21121585
P703
Q16521
USER
Where is Serine/threonine-protein kinase LMTK3 found ?
(Q21121585,P703,c(Q16521))
action filter_type
action find
entity Q21121585
relation P703
type Q16521
['Q21121585', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?f WHERE { resource:Q21121585 property:P703 ?f . ?f rdf:type ontology:Q16521 }
Serine/threonine-protein kinase LMTK3
action filter_type
action find
entity Serine/threonine-protein kinase LMTK3
relation found in taxon
type taxon
['Serine/threonine-protein kinase LMTK3', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?f WHERE { resource:Serine/threonine-protein_kinase_LMTK3 property:found_in_taxon ?f . ?f rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21121585,P703,c(Q16521))
action filter_type
action find
entity Q21121585
relation P703
type Q16521
Serine / threonine-protein kinase LMTK3 is found in [ANSWER]
['Q21121585', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?f WHERE { resource:Q21121585 property:P703 ?f . ?f rdf:type ontology:Q16521 }
Homo sapiens
Serine / threonine-protein kinase LMTK3 is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Serine/threonine-protein kinase LMTK3
relation found in taxon
type taxon
['Serine/threonine-protein kinase LMTK3', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?f WHERE { resource:Serine/threonine-protein_kinase_LMTK3 property:found_in_taxon ?f . ?f rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21121585
P681
Q15989253
USER
What is a component of that nutrient ?
(Q15978631,P681,c(Q15989253))
action filter_type
action find
entity Q21121585
relation P681
type Q15989253
['Q15978631', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?x WHERE { resource:Q21121585 property:P681 ?x . ?x rdf:type ontology:Q15989253 }
Serine/threonine-protein kinase LMTK3
action filter_type
action find
entity Serine/threonine-protein kinase LMTK3
relation cell component
type part
['Homo sapiens', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?x WHERE { resource:Serine/threonine-protein_kinase_LMTK3 property:cell_component ?x . ?x rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q15978631,P681,c(Q15989253))
action filter_type
action find
entity Q21121585
relation P681
type Q15989253
A component of that nutrient is a [ANSWER]
['Q15978631', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?x WHERE { resource:Q21121585 property:P681 ?x . ?x rdf:type ontology:Q15989253 }
membrane
A component of that nutrient is a membrane
membrane
action filter_type
action find
entity Serine/threonine-protein kinase LMTK3
relation cell component
type part
['Homo sapiens', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?x WHERE { resource:Serine/threonine-protein_kinase_LMTK3 property:cell_component ?x . ?x rdf:type ontology:part }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Indirect
P361
Q15989253 Q5058355
USER
Which parts are greater number of cellular components a component of than that part ?
(c(Q5058355),P361,c(Q15989253))
action greater
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
action count
action filter_type
action find
entity Q14349455
relation P361
type Q15989253
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?r WHERE { { SELECT DISTINCT ?r ( COUNT ( ?l ) AS ?i ) WHERE { ?l property:P361 ?r . ?r rdf:type ontology:Q15989253 . ?l rdf:type ontology:Q5058355 } GROUP BY ?r } . { SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { resource:Q14349455 property:P361 ?z . ?z rdf:type ontology:Q15989253 } } . FILTER ( ?i > ?x ) }
action greater
action find_reverse_tuple_counts
relation part of
type part
type cellular component
action count
action filter_type
action find
entity membrane
relation part of
type part
[{'concept': 'cellular component'}, 'part of', {'concept': 'part'}]
SELECT DISTINCT ?r WHERE { { SELECT DISTINCT ?r ( COUNT ( ?l ) AS ?i ) WHERE { ?l property:part_of ?r . ?r rdf:type ontology:part . ?l rdf:type ontology:cellular_component } GROUP BY ?r } . { SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { resource:membrane property:part_of ?z . ?z rdf:type ontology:part } } . FILTER ( ?i > ?x ) }
[]
part cellular component
Q187181 Q14645596
SYSTEM
synapse, extracellular region
Q187181 Q14645596
(c(Q5058355),P361,c(Q15989253))
action greater
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
action count
action filter_type
action find
entity Q14349455
relation P361
type Q15989253
The [ANSWERS] are greater number of cellular components a component of than that part
[{'concept': 'Q5058355'}, 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ?r WHERE { { SELECT DISTINCT ?r ( COUNT ( ?l ) AS ?i ) WHERE { ?l property:P361 ?r . ?r rdf:type ontology:Q15989253 . ?l rdf:type ontology:Q5058355 } GROUP BY ?r } . { SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { resource:Q14349455 property:P361 ?z . ?z rdf:type ontology:Q15989253 } } . FILTER ( ?i > ?x ) }
synapse extracellular region
The synapse and extracellular region are greater number of cellular components a component of than that part
synapse extracellular region
action greater
action find_reverse_tuple_counts
relation part of
type part
type cellular component
action count
action filter_type
action find
entity membrane
relation part of
type part
[{'concept': 'cellular component'}, 'part of', {'concept': 'part'}]
SELECT DISTINCT ?r WHERE { { SELECT DISTINCT ?r ( COUNT ( ?l ) AS ?i ) WHERE { ?l property:part_of ?r . ?r rdf:type ontology:part . ?l rdf:type ontology:cellular_component } GROUP BY ?r } . { SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { resource:membrane property:part_of ?z . ?z rdf:type ontology:part } } . FILTER ( ?i > ?x ) }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q23425458
P681
Q181394
USER
Do acetolactate synthase 2 catalytic subunit    YE0148 have those parts as cell component ?
(Q23425458,P681,Q187181) (Q23425458,P681,Q14645596)
action is_in
entity prev_answer
action find
entity Q23425458
relation P681
['Q23425458', 'P681', 'Q187181'] ['Q23425458', 'P681', 'Q14645596']
ASK WHERE { resource:Q23425458 property:P681 ?x . VALUES ( ?x ) { ( resource:Q187181 ) ( resource:Q14645596 ) } }
acetolactate synthase 2 catalytic subunit    YE0148
action is_in
entity prev_answer
action find
entity acetolactate synthase 2 catalytic subunit    YE0148
relation cell component
['acetolactate synthase 2 catalytic subunit    YE0148', 'cell component', 'synapse'] ['acetolactate synthase 2 catalytic subunit    YE0148', 'cell component', 'extracellular region']
ASK WHERE { resource:acetolactate_synthase_2_catalytic_subunit____YE0148 property:cell_component ?x . VALUES ( ?x ) { ( resource:synapse ) ( resource:extracellular_region ) } }
[]
nutrient
SYSTEM
NO
(Q23425458,P681,Q187181) (Q23425458,P681,Q14645596)
action is_in
entity prev_answer
action find
entity Q23425458
relation P681
[ANSWER]
['Q23425458', 'P681', 'Q187181'] ['Q23425458', 'P681', 'Q14645596']
ASK WHERE { resource:Q23425458 property:P681 ?x . VALUES ( ?x ) { ( resource:Q187181 ) ( resource:Q14645596 ) } }
No
action is_in
entity prev_answer
action find
entity acetolactate synthase 2 catalytic subunit    YE0148
relation cell component
['acetolactate synthase 2 catalytic subunit    YE0148', 'cell component', 'synapse'] ['acetolactate synthase 2 catalytic subunit    YE0148', 'cell component', 'extracellular region']
ASK WHERE { resource:acetolactate_synthase_2_catalytic_subunit____YE0148 property:cell_component ?x . VALUES ( ?x ) { ( resource:synapse ) ( resource:extracellular_region ) } }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q15978631 Q19359611 Q1043
P427
Q3343211
USER
Does Homo sapiens have Rausch 572 and Carl Linnaeus as its taxonomic type ?
(Q15978631,P427,Q19359611) (Q15978631,P427,Q1043)
action is_in
entity Q15978631
action intersection
action find_reverse
entity Q19359611
relation P427
action find_reverse
entity Q1043
relation P427
['Q15978631', 'P427', 'Q19359611'] ['Q15978631', 'P427', 'Q1043']
ASK WHERE { resource:Q15978631 property:P427 resource:Q1043 . resource:Q15978631 property:P427 resource:Q19359611 }
Homo sapiens Rausch 572 Carl Linnaeus
action is_in
entity Homo sapiens
action intersection
action find_reverse
entity Rausch 572
relation taxonomic type
action find_reverse
entity Carl Linnaeus
relation taxonomic type
['Homo sapiens', 'taxonomic type', 'Rausch 572'] ['Homo sapiens', 'taxonomic type', 'Carl Linnaeus']
ASK WHERE { resource:Homo_sapiens property:taxonomic_type resource:Carl_Linnaeus . resource:Homo_sapiens property:taxonomic_type resource:Rausch_572 }
[]
zoological nomenclature
SYSTEM
NO and YES respectively
(Q15978631,P427,Q19359611) (Q15978631,P427,Q1043)
action is_in
entity Q15978631
action intersection
action find_reverse
entity Q19359611
relation P427
action find_reverse
entity Q1043
relation P427
[ANSWER]
['Q15978631', 'P427', 'Q19359611'] ['Q15978631', 'P427', 'Q1043']
ASK WHERE { resource:Q15978631 property:P427 resource:Q1043 . resource:Q15978631 property:P427 resource:Q19359611 }
NO and YES respectively
action is_in
entity Homo sapiens
action intersection
action find_reverse
entity Rausch 572
relation taxonomic type
action find_reverse
entity Carl Linnaeus
relation taxonomic type
['Homo sapiens', 'taxonomic type', 'Rausch 572'] ['Homo sapiens', 'taxonomic type', 'Carl Linnaeus']
ASK WHERE { resource:Homo_sapiens property:taxonomic_type resource:Carl_Linnaeus . resource:Homo_sapiens property:taxonomic_type resource:Rausch_572 }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q21121585 Q23212254 Q18049049
P702
Q863908
USER
Is Serine/threonine-protein kinase LMTK3 encoded by cell division protein    lp_2192 and LMTK3 ?
(Q21121585,P702,Q23212254) (Q21121585,P702,Q18049049)
action is_in
entity Q21121585
action intersection
action find_reverse
entity Q23212254
relation P702
action find_reverse
entity Q18049049
relation P702
['Q21121585', 'P702', 'Q23212254'] ['Q21121585', 'P702', 'Q18049049']
ASK WHERE { resource:Q21121585 property:P702 resource:Q23212254 . resource:Q21121585 property:P702 resource:Q18049049 }
Serine/threonine-protein kinase LMTK3 cell division protein    lp_2192 LMTK3
action is_in
entity Serine/threonine-protein kinase LMTK3
action intersection
action find_reverse
entity cell division protein    lp_2192
relation encoded by
action find_reverse
entity LMTK3
relation encoded by
['Serine/threonine-protein kinase LMTK3', 'encoded by', 'cell division protein    lp_2192'] ['Serine/threonine-protein kinase LMTK3', 'encoded by', 'LMTK3']
ASK WHERE { resource:Serine/threonine-protein_kinase_LMTK3 property:encoded_by resource:cell_division_protein____lp_2192 . resource:Serine/threonine-protein_kinase_LMTK3 property:encoded_by resource:LMTK3 }
[]
nucleic acid sequence
SYSTEM
NO and YES respectively
(Q21121585,P702,Q23212254) (Q21121585,P702,Q18049049)
action is_in
entity Q21121585
action intersection
action find_reverse
entity Q23212254
relation P702
action find_reverse
entity Q18049049
relation P702
[ANSWER]
['Q21121585', 'P702', 'Q23212254'] ['Q21121585', 'P702', 'Q18049049']
ASK WHERE { resource:Q21121585 property:P702 resource:Q23212254 . resource:Q21121585 property:P702 resource:Q18049049 }
NO and YES respectively
action is_in
entity Serine/threonine-protein kinase LMTK3
action intersection
action find_reverse
entity cell division protein    lp_2192
relation encoded by
action find_reverse
entity LMTK3
relation encoded by
['Serine/threonine-protein kinase LMTK3', 'encoded by', 'cell division protein    lp_2192'] ['Serine/threonine-protein kinase LMTK3', 'encoded by', 'LMTK3']
ASK WHERE { resource:Serine/threonine-protein_kinase_LMTK3 property:encoded_by resource:cell_division_protein____lp_2192 . resource:Serine/threonine-protein_kinase_LMTK3 property:encoded_by resource:LMTK3 }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23063629 Q23425458
P688
Q863908
USER
Which nucleic acid sequences encode acetolactate synthase 2 catalytic subunit    YE0148 or ATP phosphoribosyltransferase    LA_1111 ?
OR((c(Q863908),P688,Q23425458), (c(Q863908),P688,Q23063629))
action filter_type
action union
action find_reverse
entity Q23425458
relation P688
action find_reverse
entity Q23063629
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q23425458'], [{'concept': 'Q863908'}, 'P688', 'Q23063629']]}
SELECT DISTINCT ?t WHERE { { ?t property:P688 ?b . VALUES ( ?b ) { ( resource:Q23425458 ) ( resource:Q23063629 ) } } . ?t rdf:type ontology:Q863908 }
ATP phosphoribosyltransferase    LA_1111 acetolactate synthase 2 catalytic subunit    YE0148
action filter_type
action union
action find_reverse
entity acetolactate synthase 2 catalytic subunit    YE0148
relation encodes
action find_reverse
entity ATP phosphoribosyltransferase    LA_1111
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'acetolactate synthase 2 catalytic subunit    YE0148'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'ATP phosphoribosyltransferase    LA_1111']]}
SELECT DISTINCT ?t WHERE { { ?t property:encodes ?b . VALUES ( ?b ) { ( resource:acetolactate_synthase_2_catalytic_subunit____YE0148 ) ( resource:ATP_phosphoribosyltransferase____LA_1111 ) } } . ?t rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23099582 Q23024353
SYSTEM
acetolactate synthase 2 catalytic subunit    YE0148, ATP phosphoribosyltransferase    LA_1111
Q23099582 Q23024353
OR((c(Q863908),P688,Q23425458), (c(Q863908),P688,Q23063629))
action filter_type
action union
action find_reverse
entity Q23425458
relation P688
action find_reverse
entity Q23063629
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q23425458'], [{'concept': 'Q863908'}, 'P688', 'Q23063629']]}
SELECT DISTINCT ?t WHERE { { ?t property:P688 ?b . VALUES ( ?b ) { ( resource:Q23425458 ) ( resource:Q23063629 ) } } . ?t rdf:type ontology:Q863908 }
acetolactate synthase 2 catalytic subunit    YE0148 ATP phosphoribosyltransferase    LA_1111
Acetolactate synthase 2 catalytic subunit YE0148 and ATP phosphoribosyltransferase LA 1111 encode acetolactate synthase 2 catalytic subunit YE0148 or ATP phosphoribosyltransferase LA_1111
acetolactate synthase 2 catalytic subunit    YE0148 ATP phosphoribosyltransferase    LA_1111
action filter_type
action union
action find_reverse
entity acetolactate synthase 2 catalytic subunit    YE0148
relation encodes
action find_reverse
entity ATP phosphoribosyltransferase    LA_1111
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'acetolactate synthase 2 catalytic subunit    YE0148'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'ATP phosphoribosyltransferase    LA_1111']]}
SELECT DISTINCT ?t WHERE { { ?t property:encodes ?b . VALUES ( ?b ) { ( resource:acetolactate_synthase_2_catalytic_subunit____YE0148 ) ( resource:ATP_phosphoribosyltransferase____LA_1111 ) } } . ?t rdf:type ontology:nucleic_acid_sequence }
[]