Simple Question (Direct)
Simple Question
Q27551123
P703
Q631147
USER
Where is TFIIH complex subunit TFB5 YDR079C-A found ?
(Q27551123,P703,c(Q631147))
action filter_type
action find
entity Q27551123
relation P703
type Q631147
['Q27551123', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?b WHERE { resource:Q27551123 property:P703 ?b . ?b rdf:type ontology:Q631147 }
TFIIH complex subunit TFB5 YDR079C-A
action filter_type
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation found in taxon
type infraspecific name
['TFIIH complex subunit TFB5 YDR079C-A', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?b WHERE { resource:TFIIH_complex_subunit_TFB5_YDR079C-A property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27551123,P703,c(Q631147))
action filter_type
action find
entity Q27551123
relation P703
type Q631147
TFIIH complex subunit TFB5 YDR079 C-A is found in [ANSWER]
['Q27551123', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?b WHERE { resource:Q27551123 property:P703 ?b . ?b rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
TFIIH complex subunit TFB5 YDR079 C-A is found in Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
action filter_type
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation found in taxon
type infraspecific name
['TFIIH complex subunit TFB5 YDR079C-A', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?b WHERE { resource:TFIIH_complex_subunit_TFB5_YDR079C-A property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27551123
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q27510868)
action filter_type
action find_reverse
entity Q27551123
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27510868']
SELECT DISTINCT ?z WHERE { ?z property:P688 resource:Q27551123 . ?z rdf:type ontology:Q863908 }
TFIIH complex subunit TFB5 YDR079C-A
action filter_type
action find_reverse
entity TFIIH complex subunit TFB5 YDR079C-A
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Saccharomyces cerevisiae S288c']
SELECT DISTINCT ?z WHERE { ?z property:encodes resource:TFIIH_complex_subunit_TFB5_YDR079C-A . ?z rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27544060
SYSTEM
TFIIH complex subunit TFB5 YDR079C-A
Q27544060
(c(Q863908),P688,Q27510868)
action filter_type
action find_reverse
entity Q27551123
relation P688
type Q863908
B [ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q27510868']
SELECT DISTINCT ?z WHERE { ?z property:P688 resource:Q27551123 . ?z rdf:type ontology:Q863908 }
TFIIH complex subunit TFB5 YDR079C-A
B TFIIH complex subunit TFB5 YDR079C-A encodes that nutrient
TFIIH complex subunit TFB5 YDR079C-A
action filter_type
action find_reverse
entity TFIIH complex subunit TFB5 YDR079C-A
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Saccharomyces cerevisiae S288c']
SELECT DISTINCT ?z WHERE { ?z property:encodes resource:TFIIH_complex_subunit_TFB5_YDR079C-A . ?z rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Indirect
P688
Q181394
USER
How many nutrients do that nucleic acid sequence encode ?
(Q27544060,P688,c(Q181394))
action count
action filter_type
action find
entity Q27544060
relation P688
type Q181394
['Q27544060', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?c ) AS ?a ) WHERE { resource:Q27544060 property:P688 ?c . ?c rdf:type ontology:Q181394 }
action count
action filter_type
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation encodes
type nutrient
['TFIIH complex subunit TFB5 YDR079C-A', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?c ) AS ?a ) WHERE { resource:TFIIH_complex_subunit_TFB5_YDR079C-A property:encodes ?c . ?c rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q27551123
(Q27544060,P688,c(Q181394))
action count
action filter_type
action find
entity Q27544060
relation P688
type Q181394
[ANSWER]
['Q27544060', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?c ) AS ?a ) WHERE { resource:Q27544060 property:P688 ?c . ?c rdf:type ontology:Q181394 }
TFIIH complex subunit TFB5 YDR079C-A
1
action count
action filter_type
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation encodes
type nutrient
['TFIIH complex subunit TFB5 YDR079C-A', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?c ) AS ?a ) WHERE { resource:TFIIH_complex_subunit_TFB5_YDR079C-A property:encodes ?c . ?c rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q27544060 Q24254638
P703
Q631147
USER
How many infraspecific names are TFIIH complex subunit TFB5 YDR079C-A or operon 009 found in ?
(Q27544060,P703,c(Q631147)) (Q24254638,P703,c(Q631147))
action count
action union
action filter_type
action find
entity Q27544060
relation P703
type Q631147
action filter_type
action find
entity Q24254638
relation P703
type Q631147
['Q27544060', 'P703', {'concept': 'Q631147'}] ['Q24254638', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?h ) WHERE { ?j property:P703 ?e . VALUES ( ?j ) { ( resource:Q27544060 ) ( resource:Q24254638 ) } }
TFIIH complex subunit TFB5 YDR079C-A operon 009
action count
action union
action filter_type
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation found in taxon
type infraspecific name
action filter_type
action find
entity operon 009
relation found in taxon
type infraspecific name
['TFIIH complex subunit TFB5 YDR079C-A', 'found in taxon', {'concept': 'infraspecific name'}] ['operon 009', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?h ) WHERE { ?j property:found_in_taxon ?e . VALUES ( ?j ) { ( resource:TFIIH_complex_subunit_TFB5_YDR079C-A ) ( resource:operon_009 ) } }
[]
infraspecific name
SYSTEM
2
Q27510868 Q21102981
(Q27544060,P703,c(Q631147)) (Q24254638,P703,c(Q631147))
action count
action union
action filter_type
action find
entity Q27544060
relation P703
type Q631147
action filter_type
action find
entity Q24254638
relation P703
type Q631147
[ANSWER]
['Q27544060', 'P703', {'concept': 'Q631147'}] ['Q24254638', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?h ) WHERE { ?j property:P703 ?e . VALUES ( ?j ) { ( resource:Q27544060 ) ( resource:Q24254638 ) } }
Saccharomyces cerevisiae S288c Listeria monocytogenes EGD-e
2
action count
action union
action filter_type
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation found in taxon
type infraspecific name
action filter_type
action find
entity operon 009
relation found in taxon
type infraspecific name
['TFIIH complex subunit TFB5 YDR079C-A', 'found in taxon', {'concept': 'infraspecific name'}] ['operon 009', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?h ) WHERE { ?j property:found_in_taxon ?e . VALUES ( ?j ) { ( resource:TFIIH_complex_subunit_TFB5_YDR079C-A ) ( resource:operon_009 ) } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27551123
P702
Q863908
USER
What is the gene that encodes TFIIH complex subunit TFB5 YDR079C-A ?
(Q27551123,P702,c(Q863908))
action filter_type
action find
entity Q27551123
relation P702
type Q863908
['Q27551123', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q863908 . resource:Q27551123 property:P702 ?a }
TFIIH complex subunit TFB5 YDR079C-A
action filter_type
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation encoded by
type nucleic acid sequence
['TFIIH complex subunit TFB5 YDR079C-A', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:nucleic_acid_sequence . resource:TFIIH_complex_subunit_TFB5_YDR079C-A property:encoded_by ?a }
[]
nucleic acid sequence
Q27544060
SYSTEM
TFIIH complex subunit TFB5 YDR079C-A
Q27544060
(Q27551123,P702,c(Q863908))
action filter_type
action find
entity Q27551123
relation P702
type Q863908
The gene that encodes [ANSWER] is in [ANSWER]
['Q27551123', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:Q863908 . resource:Q27551123 property:P702 ?a }
TFIIH complex subunit TFB5 YDR079C-A
The gene that encodes TFIIH complex subunit TFB5 YDR079C-A is in TFIIH complex subunit TFB5 YDR079C-A
TFIIH complex subunit TFB5 YDR079C-A
action filter_type
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation encoded by
type nucleic acid sequence
['TFIIH complex subunit TFB5 YDR079C-A', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { ?a rdf:type ontology:nucleic_acid_sequence . resource:TFIIH_complex_subunit_TFB5_YDR079C-A property:encoded_by ?a }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q27544060 Q27551123
P702
Q181394
USER
Does that nucleic acid sequence encode TFIIH complex subunit TFB5 YDR079C-A ?
(Q27551123,P702,Q27544060)
action is_in
entity Q27544060
action find
entity Q27551123
relation P702
['Q27551123', 'P702', 'Q27544060']
ASK WHERE { resource:Q27551123 property:P702 resource:Q27544060 }
TFIIH complex subunit TFB5 YDR079C-A TFIIH complex subunit TFB5 YDR079C-A
action is_in
entity TFIIH complex subunit TFB5 YDR079C-A
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation encoded by
['TFIIH complex subunit TFB5 YDR079C-A', 'encoded by', 'TFIIH complex subunit TFB5 YDR079C-A']
ASK WHERE { resource:TFIIH_complex_subunit_TFB5_YDR079C-A property:encoded_by resource:TFIIH_complex_subunit_TFB5_YDR079C-A }
[]
nutrient
SYSTEM
YES
(Q27551123,P702,Q27544060)
action is_in
entity Q27544060
action find
entity Q27551123
relation P702
[ANSWER]
['Q27551123', 'P702', 'Q27544060']
ASK WHERE { resource:Q27551123 property:P702 resource:Q27544060 }
Yes
action is_in
entity TFIIH complex subunit TFB5 YDR079C-A
action find
entity TFIIH complex subunit TFB5 YDR079C-A
relation encoded by
['TFIIH complex subunit TFB5 YDR079C-A', 'encoded by', 'TFIIH complex subunit TFB5 YDR079C-A']
ASK WHERE { resource:TFIIH_complex_subunit_TFB5_YDR079C-A property:encoded_by resource:TFIIH_complex_subunit_TFB5_YDR079C-A }
[]