Simple Question (Direct)
Simple Question
Q18030560
P688
Q181394
USER
What do PIP4K2A encode ?
(Q18030560,P688,c(Q181394))
action filter_type
action find
entity Q18030560
relation P688
type Q181394
['Q18030560', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?m WHERE { resource:Q18030560 property:P688 ?m . ?m rdf:type ontology:Q181394 }
PIP4K2A
action filter_type
action find
entity PIP4K2A
relation encodes
type nutrient
['PIP4K2A', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?m WHERE { resource:PIP4K2A property:encodes ?m . ?m rdf:type ontology:nutrient }
[]
nutrient
Q21119718 Q21145159
SYSTEM
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha, Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
Q21119718 Q21145159
(Q18030560,P688,c(Q181394))
action filter_type
action find
entity Q18030560
relation P688
type Q181394
PIP4K2A encode codes [ANSWERS]
['Q18030560', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?m WHERE { resource:Q18030560 property:P688 ?m . ?m rdf:type ontology:Q181394 }
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
PIP4K2A encode codes Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha and Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
action filter_type
action find
entity PIP4K2A
relation encodes
type nutrient
['PIP4K2A', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?m WHERE { resource:PIP4K2A property:encodes ?m . ?m rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18030560
P684
Q863908
USER
Which is the species that has that one as its orthologous gene ?
(c(Q863908),P684,Q21119718) (c(Q863908),P684,Q21145159)
action filter_type
action find
entity Q18030560
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q21119718'] [{'concept': 'Q863908'}, 'P684', 'Q21145159']
SELECT DISTINCT ?p WHERE { resource:Q18030560 property:P684 ?p . ?p rdf:type ontology:Q863908 }
PIP4K2A
action filter_type
action find
entity PIP4K2A
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha'] [{'concept': 'nucleic acid sequence'}, 'ortholog', 'Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha']
SELECT DISTINCT ?p WHERE { resource:PIP4K2A property:ortholog ?p . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18253031
SYSTEM
Pip4k2a
Q18253031
(c(Q863908),P684,Q21119718) (c(Q863908),P684,Q21145159)
action filter_type
action find
entity Q18030560
relation P684
type Q863908
[ANSWER] is the species that has that one as its orthologous gene
[{'concept': 'Q863908'}, 'P684', 'Q21119718'] [{'concept': 'Q863908'}, 'P684', 'Q21145159']
SELECT DISTINCT ?p WHERE { resource:Q18030560 property:P684 ?p . ?p rdf:type ontology:Q863908 }
Pip4k2a
Pip4k2a is the species that has that one as its orthologous gene
Pip4k2a
action filter_type
action find
entity PIP4K2A
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha'] [{'concept': 'nucleic acid sequence'}, 'ortholog', 'Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha']
SELECT DISTINCT ?p WHERE { resource:PIP4K2A property:ortholog ?p . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Indirect
P684
Q863908
USER
How many nucleic acid sequences are an otrhologus genes for that nucleic acid sequence ?
(Q18253031,P684,c(Q863908))
action count
action filter_type
action find
entity Q18253031
relation P684
type Q863908
['Q18253031', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?t ) WHERE { resource:Q18253031 property:P684 ?b . ?b rdf:type ontology:Q863908 }
action count
action filter_type
action find
entity Pip4k2a
relation ortholog
type nucleic acid sequence
['Pip4k2a', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?t ) WHERE { resource:Pip4k2a property:ortholog ?b . ?b rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q18030560
(Q18253031,P684,c(Q863908))
action count
action filter_type
action find
entity Q18253031
relation P684
type Q863908
[ANSWER]
['Q18253031', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?t ) WHERE { resource:Q18253031 property:P684 ?b . ?b rdf:type ontology:Q863908 }
PIP4K2A
1
action count
action filter_type
action find
entity Pip4k2a
relation ortholog
type nucleic acid sequence
['Pip4k2a', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?t ) WHERE { resource:Pip4k2a property:ortholog ?b . ?b rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23616055 Q21119718
P688
Q863908
USER
Which nucleic acid sequences encode Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha or hypothetical protein    SRU_2321 ?
OR((c(Q863908),P688,Q21119718), (c(Q863908),P688,Q23616055))
action filter_type
action union
action find_reverse
entity Q21119718
relation P688
action find_reverse
entity Q23616055
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q21119718'], [{'concept': 'Q863908'}, 'P688', 'Q23616055']]}
SELECT DISTINCT ?v WHERE { { ?v property:P688 ?h . VALUES ( ?h ) { ( resource:Q21119718 ) ( resource:Q23616055 ) } } . ?v rdf:type ontology:Q863908 }
hypothetical protein    SRU_2321 Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
action filter_type
action union
action find_reverse
entity Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
relation encodes
action find_reverse
entity hypothetical protein    SRU_2321
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    SRU_2321']]}
SELECT DISTINCT ?v WHERE { { ?v property:encodes ?h . VALUES ( ?h ) { ( resource:Phosphatidylinositol_5-phosphate_4-kinase_type-2_alpha ) ( resource:hypothetical_protein____SRU_2321 ) } } . ?v rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23391125 Q18030560
SYSTEM
hypothetical protein    SRU_2321, PIP4K2A
Q23391125 Q18030560
OR((c(Q863908),P688,Q21119718), (c(Q863908),P688,Q23616055))
action filter_type
action union
action find_reverse
entity Q21119718
relation P688
action find_reverse
entity Q23616055
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q21119718'], [{'concept': 'Q863908'}, 'P688', 'Q23616055']]}
SELECT DISTINCT ?v WHERE { { ?v property:P688 ?h . VALUES ( ?h ) { ( resource:Q21119718 ) ( resource:Q23616055 ) } } . ?v rdf:type ontology:Q863908 }
hypothetical protein    SRU_2321 PIP4K2A
Hypothetical protein SRU 2321 and PIP4K2A encode Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha or hypothetical protein SRU_2321
hypothetical protein    SRU_2321 PIP4K2A
action filter_type
action union
action find_reverse
entity Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha
relation encodes
action find_reverse
entity hypothetical protein    SRU_2321
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'hypothetical protein    SRU_2321']]}
SELECT DISTINCT ?v WHERE { { ?v property:encodes ?h . VALUES ( ?h ) { ( resource:Phosphatidylinositol_5-phosphate_4-kinase_type-2_alpha ) ( resource:hypothetical_protein____SRU_2321 ) } } . ?v rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q18253031 Q18298444
P684
Q863908
USER
How many nucleic acid sequences are an orthologous gene for Pip4k2a or Lctl ?
(Q18253031,P684,c(Q863908)) (Q18298444,P684,c(Q863908))
action count
action union
action filter_type
action find
entity Q18253031
relation P684
type Q863908
action filter_type
action find
entity Q18298444
relation P684
type Q863908
['Q18253031', 'P684', {'concept': 'Q863908'}] ['Q18298444', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?a ) WHERE { VALUES ( ?c ) { ( resource:Q18253031 ) ( resource:Q18298444 ) } . ?c property:P684 ?r }
Pip4k2a Lctl
action count
action union
action filter_type
action find
entity Pip4k2a
relation ortholog
type nucleic acid sequence
action filter_type
action find
entity Lctl
relation ortholog
type nucleic acid sequence
['Pip4k2a', 'ortholog', {'concept': 'nucleic acid sequence'}] ['Lctl', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?a ) WHERE { VALUES ( ?c ) { ( resource:Pip4k2a ) ( resource:Lctl ) } . ?c property:ortholog ?r }
[]
nucleic acid sequence
SYSTEM
2
Q18030560 Q18053094
(Q18253031,P684,c(Q863908)) (Q18298444,P684,c(Q863908))
action count
action union
action filter_type
action find
entity Q18253031
relation P684
type Q863908
action filter_type
action find
entity Q18298444
relation P684
type Q863908
[ANSWER]
['Q18253031', 'P684', {'concept': 'Q863908'}] ['Q18298444', 'P684', {'concept': 'Q863908'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?a ) WHERE { VALUES ( ?c ) { ( resource:Q18253031 ) ( resource:Q18298444 ) } . ?c property:P684 ?r }
PIP4K2A LCTL
2
action count
action union
action filter_type
action find
entity Pip4k2a
relation ortholog
type nucleic acid sequence
action filter_type
action find
entity Lctl
relation ortholog
type nucleic acid sequence
['Pip4k2a', 'ortholog', {'concept': 'nucleic acid sequence'}] ['Lctl', 'ortholog', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ( COUNT ( ?r ) AS ?a ) WHERE { VALUES ( ?c ) { ( resource:Pip4k2a ) ( resource:Lctl ) } . ?c property:ortholog ?r }
[]
Logical Reasoning (All)
Logical|Union|Multiple_Relation
Q24278062 Q18298444
P702 P684
Q863908
USER
Which nucleic acid sequences are an otrhologus genes for Lctl or are the gene that encodes ATP-dependent RNA helicase RhlB    O3K_24970 ?
OR((Q18298444,P684,c(Q863908)), (Q24278062,P702,c(Q863908)))
action filter_type
action union
action find
entity Q18298444
relation P684
action find
entity Q24278062
relation P702
type Q863908
{'OR': [['Q18298444', 'P684', {'concept': 'Q863908'}], ['Q24278062', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?i WHERE { { { resource:Q18298444 property:P684 ?i } UNION { resource:Q24278062 property:P702 ?i } } . ?i rdf:type ontology:Q863908 }
ATP-dependent RNA helicase RhlB    O3K_24970 Lctl
action filter_type
action union
action find
entity Lctl
relation ortholog
action find
entity ATP-dependent RNA helicase RhlB    O3K_24970
relation encoded by
type nucleic acid sequence
{'OR': [['Lctl', 'ortholog', {'concept': 'nucleic acid sequence'}], ['ATP-dependent RNA helicase RhlB    O3K_24970', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?i WHERE { { { resource:Lctl property:ortholog ?i } UNION { resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 property:encoded_by ?i } } . ?i rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23111084 Q18053094
SYSTEM
ATP-dependent RNA helicase RhlB    O3K_24970, LCTL
Q23111084 Q18053094
OR((Q18298444,P684,c(Q863908)), (Q24278062,P702,c(Q863908)))
action filter_type
action union
action find
entity Q18298444
relation P684
action find
entity Q24278062
relation P702
type Q863908
[ANSWERS]
{'OR': [['Q18298444', 'P684', {'concept': 'Q863908'}], ['Q24278062', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?i WHERE { { { resource:Q18298444 property:P684 ?i } UNION { resource:Q24278062 property:P702 ?i } } . ?i rdf:type ontology:Q863908 }
ATP-dependent RNA helicase RhlB    O3K_24970 LCTL
ATP-dependent RNA helicase RhlB O3K 24970 and LCTL are an otrhologus genes for Lctl or are the gene that encodes ATP-dependent RNA helicase RhlB O3K_24970
ATP-dependent RNA helicase RhlB    O3K_24970 LCTL
action filter_type
action union
action find
entity Lctl
relation ortholog
action find
entity ATP-dependent RNA helicase RhlB    O3K_24970
relation encoded by
type nucleic acid sequence
{'OR': [['Lctl', 'ortholog', {'concept': 'nucleic acid sequence'}], ['ATP-dependent RNA helicase RhlB    O3K_24970', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?i WHERE { { { resource:Lctl property:ortholog ?i } UNION { resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 property:encoded_by ?i } } . ?i rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q23111084 Q18053094
P702
Q181394
USER
Which nutrients do ATP-dependent RNA helicase RhlB    O3K_24970 and LCTL encode ?
(c(Q181394),P702,Q23111084) (c(Q181394),P702,Q18053094)
action union
action filter_type
action find_reverse
entity Q23111084
relation P702
type Q181394
action filter_type
action find_reverse
entity Q18053094
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23111084'] [{'concept': 'Q181394'}, 'P702', 'Q18053094']
SELECT DISTINCT ?q WHERE { VALUES ( ?d ) { ( resource:Q23111084 ) ( resource:Q18053094 ) } . ?q property:P702 ?d }
ATP-dependent RNA helicase RhlB    O3K_24970 LCTL
action union
action filter_type
action find_reverse
entity ATP-dependent RNA helicase RhlB    O3K_24970
relation encoded by
type nutrient
action filter_type
action find_reverse
entity LCTL
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'ATP-dependent RNA helicase RhlB    O3K_24970'] [{'concept': 'nutrient'}, 'encoded by', 'LCTL']
SELECT DISTINCT ?q WHERE { VALUES ( ?d ) { ( resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 ) ( resource:LCTL ) } . ?q property:encoded_by ?d }
[]
nutrient
Q24278062 Q21108861
SYSTEM
ATP-dependent RNA helicase RhlB    O3K_24970, Lactase-like protein
Q24278062 Q21108861
(c(Q181394),P702,Q23111084) (c(Q181394),P702,Q18053094)
action union
action filter_type
action find_reverse
entity Q23111084
relation P702
type Q181394
action filter_type
action find_reverse
entity Q18053094
relation P702
type Q181394
[ANSWERS]
[{'concept': 'Q181394'}, 'P702', 'Q23111084'] [{'concept': 'Q181394'}, 'P702', 'Q18053094']
SELECT DISTINCT ?q WHERE { VALUES ( ?d ) { ( resource:Q23111084 ) ( resource:Q18053094 ) } . ?q property:P702 ?d }
ATP-dependent RNA helicase RhlB    O3K_24970 Lactase-like protein
And ATP-dependent RNA helicase RhlB O3K 24970 and Lactase-like protein ATP-dependent RNA helicase RhlB O3K_24970 and LCTL encode
ATP-dependent RNA helicase RhlB    O3K_24970 Lactase-like protein
action union
action filter_type
action find_reverse
entity ATP-dependent RNA helicase RhlB    O3K_24970
relation encoded by
type nutrient
action filter_type
action find_reverse
entity LCTL
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'ATP-dependent RNA helicase RhlB    O3K_24970'] [{'concept': 'nutrient'}, 'encoded by', 'LCTL']
SELECT DISTINCT ?q WHERE { VALUES ( ?d ) { ( resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 ) ( resource:LCTL ) } . ?q property:encoded_by ?d }
[]
Clarification
Simple Question|Single Entity|Indirect
Q24278062
P703
Q631147
USER
Which taxon does that nutrient belong to ?
(Q24278062,P703,c(Q631147))
action filter_type
action find
entity Q24278062
relation P703
type Q631147
['Q24278062', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q24278062 property:P703 ?d . ?d rdf:type ontology:Q631147 }
ATP-dependent RNA helicase RhlB    O3K_24970
action filter_type
action find
entity ATP-dependent RNA helicase RhlB    O3K_24970
relation found in taxon
type infraspecific name
['ATP-dependent RNA helicase RhlB    O3K_24970', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
infraspecific name
Clarification for simple ques.
Q21108861
SYSTEM
Did you mean Lactase-like protein ?
Q24278062 Q21108861
(Q24278062,P703,c(Q631147)) (Q21108861,P703,c(Q631147))
[ANSWER]
['Q24278062', 'P703', {'concept': 'Q631147'}] ['Q21108861', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q24278062 property:P703 ?d . ?d rdf:type ontology:Q631147 }
ATP-dependent RNA helicase RhlB    O3K_24970 Lactase-like protein
Did you mean Lactase-like protein ?
Lactase-like protein
['ATP-dependent RNA helicase RhlB    O3K_24970', 'found in taxon', {'concept': 'infraspecific name'}] ['Lactase-like protein', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
USER
No, I meant ATP-dependent RNA helicase RhlB    O3K_24970. Could you tell me the answer for that?
(Q24278062,P703,c(Q631147))
Q24278062
['Q24278062', 'P703', {'concept': 'Q631147'}]
['ATP-dependent RNA helicase RhlB    O3K_24970', 'found in taxon', {'concept': 'infraspecific name'}]
[]
Q21102937
SYSTEM
Escherichia coli O104:H4 str. 2011C-3493
Q21102937
(Q24278062,P703,c(Q631147))
action filter_type
action find
entity Q24278062
relation P703
type Q631147
That nutrient belongs in [ANSWER]
['Q24278062', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q24278062 property:P703 ?d . ?d rdf:type ontology:Q631147 }
Escherichia coli O104:H4 str. 2011C-3493
That nutrient belongs in Escherichia coli O104:H4 str. 2011C-3493
Escherichia coli O104:H4 str. 2011C-3493
action filter_type
action find
entity ATP-dependent RNA helicase RhlB    O3K_24970
relation found in taxon
type infraspecific name
['ATP-dependent RNA helicase RhlB    O3K_24970', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q24278062
P688
Q863908
USER
How many nucleic acid sequences encode ATP-dependent RNA helicase RhlB    O3K_24970 ?
(c(Q863908),P688,Q24278062)
action count
action filter_type
action find_reverse
entity Q24278062
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24278062']
SELECT DISTINCT ( COUNT ( ?h ) AS ?z ) WHERE { ?h property:P688 resource:Q24278062 . ?h rdf:type ontology:Q863908 }
ATP-dependent RNA helicase RhlB    O3K_24970
action count
action filter_type
action find_reverse
entity ATP-dependent RNA helicase RhlB    O3K_24970
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ATP-dependent RNA helicase RhlB    O3K_24970']
SELECT DISTINCT ( COUNT ( ?h ) AS ?z ) WHERE { ?h property:encodes resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
SYSTEM
1
Q23111084
(c(Q863908),P688,Q24278062)
action count
action filter_type
action find_reverse
entity Q24278062
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q24278062']
SELECT DISTINCT ( COUNT ( ?h ) AS ?z ) WHERE { ?h property:P688 resource:Q24278062 . ?h rdf:type ontology:Q863908 }
ATP-dependent RNA helicase RhlB    O3K_24970
1
action count
action filter_type
action find_reverse
entity ATP-dependent RNA helicase RhlB    O3K_24970
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'ATP-dependent RNA helicase RhlB    O3K_24970']
SELECT DISTINCT ( COUNT ( ?h ) AS ?z ) WHERE { ?h property:encodes resource:ATP-dependent_RNA_helicase_RhlB____O3K_24970 . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q18053094
P703
Q16521
USER
Which taxon is LCTL found in ?
(Q18053094,P703,c(Q16521))
action filter_type
action find
entity Q18053094
relation P703
type Q16521
['Q18053094', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?r WHERE { resource:Q18053094 property:P703 ?r . ?r rdf:type ontology:Q16521 }
LCTL
action filter_type
action find
entity LCTL
relation found in taxon
type taxon
['LCTL', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?r WHERE { resource:LCTL property:found_in_taxon ?r . ?r rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q18053094,P703,c(Q16521))
action filter_type
action find
entity Q18053094
relation P703
type Q16521
LCTL is found in [ANSWER]
['Q18053094', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?r WHERE { resource:Q18053094 property:P703 ?r . ?r rdf:type ontology:Q16521 }
Homo sapiens
LCTL is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity LCTL
relation found in taxon
type taxon
['LCTL', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?r WHERE { resource:LCTL property:found_in_taxon ?r . ?r rdf:type ontology:taxon }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q15978631 Q18253031
P703 P684
Q863908
USER
Which nucleic acid sequences are the name of the species that have Pip4k2a as their orthologous gene and species belongs to the taxon Homo sapiens ?
AND((c(Q863908),P684,Q18253031), (c(Q863908),P703,Q15978631))
action filter_type
action intersection
action find_reverse
entity Q18253031
relation P684
action find_reverse
entity Q15978631
relation P703
type Q863908
{'AND': [[{'concept': 'Q863908'}, 'P684', 'Q18253031'], [{'concept': 'Q863908'}, 'P703', 'Q15978631']]}
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q863908 . ?g property:P684 resource:Q18253031 . ?g property:P703 resource:Q15978631 }
Homo sapiens Pip4k2a
action filter_type
action intersection
action find_reverse
entity Pip4k2a
relation ortholog
action find_reverse
entity Homo sapiens
relation found in taxon
type nucleic acid sequence
{'AND': [[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Pip4k2a'], [{'concept': 'nucleic acid sequence'}, 'found in taxon', 'Homo sapiens']]}
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:nucleic_acid_sequence . ?g property:ortholog resource:Pip4k2a . ?g property:found_in_taxon resource:Homo_sapiens }
[]
nucleic acid sequence
Q18030560
SYSTEM
PIP4K2A
Q18030560
AND((c(Q863908),P684,Q18253031), (c(Q863908),P703,Q15978631))
action filter_type
action intersection
action find_reverse
entity Q18253031
relation P684
action find_reverse
entity Q15978631
relation P703
type Q863908
[ANSWER] is the name of the species that have Pip4k2a as their orthologous gene and species belongs to the taxon Homo sapiens
{'AND': [[{'concept': 'Q863908'}, 'P684', 'Q18253031'], [{'concept': 'Q863908'}, 'P703', 'Q15978631']]}
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:Q863908 . ?g property:P684 resource:Q18253031 . ?g property:P703 resource:Q15978631 }
PIP4K2A
PIP4K2A is the name of the species that have Pip4k2a as their orthologous gene and species belongs to the taxon Homo sapiens
PIP4K2A
action filter_type
action intersection
action find_reverse
entity Pip4k2a
relation ortholog
action find_reverse
entity Homo sapiens
relation found in taxon
type nucleic acid sequence
{'AND': [[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Pip4k2a'], [{'concept': 'nucleic acid sequence'}, 'found in taxon', 'Homo sapiens']]}
SELECT DISTINCT ?g WHERE { ?g rdf:type ontology:nucleic_acid_sequence . ?g property:ortholog resource:Pip4k2a . ?g property:found_in_taxon resource:Homo_sapiens }
[]