Simple Question (Direct)
Simple Question
Q23460209
P703
Q631147
USER
Where is phosphatidate cytidylyltransferase    FN1308 found ?
(Q23460209,P703,c(Q631147))
action filter_type
action find
entity Q23460209
relation P703
type Q631147
['Q23460209', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q631147 . resource:Q23460209 property:P703 ?q }
phosphatidate cytidylyltransferase    FN1308
action filter_type
action find
entity phosphatidate cytidylyltransferase    FN1308
relation found in taxon
type infraspecific name
['phosphatidate cytidylyltransferase    FN1308', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:infraspecific_name . resource:phosphatidate_cytidylyltransferase____FN1308 property:found_in_taxon ?q }
[]
infraspecific name
Q21102951
SYSTEM
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Q21102951
(Q23460209,P703,c(Q631147))
action filter_type
action find
entity Q23460209
relation P703
type Q631147
Phosphatidate cytidylyltransferase FN1308 is found in [ANSWER]
['Q23460209', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q631147 . resource:Q23460209 property:P703 ?q }
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Phosphatidate cytidylyltransferase FN1308 is found in Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Fusobacterium nucleatum subsp. nucleatum ATCC 25586
action filter_type
action find
entity phosphatidate cytidylyltransferase    FN1308
relation found in taxon
type infraspecific name
['phosphatidate cytidylyltransferase    FN1308', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:infraspecific_name . resource:phosphatidate_cytidylyltransferase____FN1308 property:found_in_taxon ?q }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23460209
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q21102951)
action filter_type
action find_reverse
entity Q23460209
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21102951']
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q863908 . ?u property:P688 resource:Q23460209 }
phosphatidate cytidylyltransferase    FN1308
action filter_type
action find_reverse
entity phosphatidate cytidylyltransferase    FN1308
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Fusobacterium nucleatum subsp. nucleatum ATCC 25586']
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:nucleic_acid_sequence . ?u property:encodes resource:phosphatidate_cytidylyltransferase____FN1308 }
[]
nucleic acid sequence
Q23116118
SYSTEM
phosphatidate cytidylyltransferase    FN1308
Q23116118
(c(Q863908),P688,Q21102951)
action filter_type
action find_reverse
entity Q23460209
relation P688
type Q863908
Phosphatidate cytidylyltransferase FN1308 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q21102951']
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q863908 . ?u property:P688 resource:Q23460209 }
phosphatidate cytidylyltransferase    FN1308
Phosphatidate cytidylyltransferase FN1308 encodes that nutrient
phosphatidate cytidylyltransferase    FN1308
action filter_type
action find_reverse
entity phosphatidate cytidylyltransferase    FN1308
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Fusobacterium nucleatum subsp. nucleatum ATCC 25586']
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:nucleic_acid_sequence . ?u property:encodes resource:phosphatidate_cytidylyltransferase____FN1308 }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q23116118 Q23432205
P688
Q181394
USER
Is phosphatidate cytidylyltransferase    FN1308 an encoding of peroxiredoxin bcp    AHA_0894 ?
(Q23116118,P688,Q23432205)
action is_in
entity Q23432205
action find
entity Q23116118
relation P688
['Q23116118', 'P688', 'Q23432205']
ASK WHERE { resource:Q23116118 property:P688 resource:Q23432205 }
phosphatidate cytidylyltransferase    FN1308 peroxiredoxin bcp    AHA_0894
action is_in
entity peroxiredoxin bcp    AHA_0894
action find
entity phosphatidate cytidylyltransferase    FN1308
relation encodes
['phosphatidate cytidylyltransferase    FN1308', 'encodes', 'peroxiredoxin bcp    AHA_0894']
ASK WHERE { resource:phosphatidate_cytidylyltransferase____FN1308 property:encodes resource:peroxiredoxin_bcp____AHA_0894 }
[]
nutrient
SYSTEM
NO
(Q23116118,P688,Q23432205)
action is_in
entity Q23432205
action find
entity Q23116118
relation P688
[ANSWER]
['Q23116118', 'P688', 'Q23432205']
ASK WHERE { resource:Q23116118 property:P688 resource:Q23432205 }
No
action is_in
entity peroxiredoxin bcp    AHA_0894
action find
entity phosphatidate cytidylyltransferase    FN1308
relation encodes
['phosphatidate cytidylyltransferase    FN1308', 'encodes', 'peroxiredoxin bcp    AHA_0894']
ASK WHERE { resource:phosphatidate_cytidylyltransferase____FN1308 property:encodes resource:peroxiredoxin_bcp____AHA_0894 }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23116118
P702
Q181394
USER
What is encoded by that nucleic acid sequence ?
action filter_type
action find_reverse
entity Q23116118
relation P702
type Q181394
SELECT DISTINCT ?z WHERE { ?z property:P702 resource:Q23116118 . ?z rdf:type ontology:Q181394 }
phosphatidate cytidylyltransferase    FN1308
action filter_type
action find_reverse
entity phosphatidate cytidylyltransferase    FN1308
relation encoded by
type nutrient
SELECT DISTINCT ?z WHERE { ?z property:encoded_by resource:phosphatidate_cytidylyltransferase____FN1308 . ?z rdf:type ontology:nutrient }
[]
nutrient
Q23460209
SYSTEM
phosphatidate cytidylyltransferase    FN1308
Q23460209
action filter_type
action find_reverse
entity Q23116118
relation P702
type Q181394
The phosphatidate cytidylyltransferase FN1308 is encoded by that nucleic acid sequence
SELECT DISTINCT ?z WHERE { ?z property:P702 resource:Q23116118 . ?z rdf:type ontology:Q181394 }
phosphatidate cytidylyltransferase    FN1308
The phosphatidate cytidylyltransferase FN1308 is encoded by that nucleic acid sequence
phosphatidate cytidylyltransferase    FN1308
action filter_type
action find_reverse
entity phosphatidate cytidylyltransferase    FN1308
relation encoded by
type nutrient
SELECT DISTINCT ?z WHERE { ?z property:encoded_by resource:phosphatidate_cytidylyltransferase____FN1308 . ?z rdf:type ontology:nutrient }
[]
Quantitative Reasoning (All)
Quantitative|Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q79529 Q8386
USER
Which nutrients do approximately 66 chemical substances and drugs communicate with ?
(c(Q79529)|c(Q8386),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 66
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ( COUNT ( ?i ) AS ?s ) ?h WHERE { ?i rdf:type ?q . VALUES ( ?q ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } } GROUP BY ?h } . FILTER ( ?s = 66 ) }
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 66
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ( COUNT ( ?i ) AS ?s ) ?h WHERE { ?i rdf:type ?q . VALUES ( ?q ) { ( ontology:chemical_substance ) ( ontology:drug ) } } GROUP BY ?h } . FILTER ( ?s = 66 ) }
[]
nutrient chemical substance drug
Q4639596 Q21108118 Q21115046
SYSTEM
5-hydroxytryptamine receptor 2B, 5-hydroxytryptamine receptor 2C, 5-hydroxytryptamine receptor 1D
Q4639596 Q21108118 Q21115046
(c(Q79529)|c(Q8386),P129,c(Q181394))
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 66
[ANSWERS] approximately 66 chemical substances and drugs communicate with
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ( COUNT ( ?i ) AS ?s ) ?h WHERE { ?i rdf:type ?q . VALUES ( ?q ) { ( ontology:Q79529 ) ( ontology:Q8386 ) } } GROUP BY ?h } . FILTER ( ?s = 66 ) }
5-hydroxytryptamine receptor 2B 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1D
5-hydroxytryptamine receptor 2B, 5-hydroxytryptamine receptor 2C and 5-hydroxytryptamine receptor 1D approximately 66 chemical substances and drugs communicate with
5-hydroxytryptamine receptor 2B 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1D
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 66
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ?h WHERE { { SELECT DISTINCT ( COUNT ( ?i ) AS ?s ) ?h WHERE { ?i rdf:type ?q . VALUES ( ?q ) { ( ontology:chemical_substance ) ( ontology:drug ) } } GROUP BY ?h } . FILTER ( ?s = 66 ) }
[]
Clarification
Comparative|Count over More/Less|Mult. entity type|Indirect
P129
Q181394 Q181394 Q79529
USER
How many nutrients do approximately the same number of nutrients and chemical substances interact with as that nutrient ?
(c(Q181394)|c(Q79529),P129,c(Q181394))
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P129 ?z } UNION { ?y property:P129 ?z } } . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q79529 }
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:physically_interacts_with ?z } UNION { ?y property:physically_interacts_with ?z } } . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:chemical_substance }
[]
nutrient nutrient chemical substance
Comparative|Count over More/Less|Mult. entity type|Clarification
Q21108118
SYSTEM
Did you mean 5-hydroxytryptamine receptor 2C ?
(c(Q181394)|c(Q79529),P129,c(Q181394))
[ANSWER]
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P129 ?z } UNION { ?y property:P129 ?z } } . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q79529 }
Did you mean 5-hydroxytryptamine receptor 2C ?
5-hydroxytryptamine receptor 2C
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:physically_interacts_with ?z } UNION { ?y property:physically_interacts_with ?z } } . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:chemical_substance }
[]
Comparative Reasoning (Count) (All)
USER
Yes
(c(Q181394)|c(Q79529),P129,c(Q181394))
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
[]
SYSTEM
3
Q4639596 Q21108118 Q21115043
(c(Q181394)|c(Q79529),P129,c(Q181394))
[ANSWER]
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:P129 ?z } UNION { ?y property:P129 ?z } } . ?z rdf:type ontology:Q181394 . ?y rdf:type ontology:Q79529 }
5-hydroxytryptamine receptor 2B 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1A
3
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?z ) AS ?x ) WHERE { { { ?z property:physically_interacts_with ?z } UNION { ?y property:physically_interacts_with ?z } } . ?z rdf:type ontology:nutrient . ?y rdf:type ontology:chemical_substance }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23460209
P681
Q15989253
USER
What is a component of phosphatidate cytidylyltransferase    FN1308 ?
(Q23460209,P681,c(Q15989253))
action filter_type
action find
entity Q23460209
relation P681
type Q15989253
['Q23460209', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?g WHERE { resource:Q23460209 property:P681 ?g . ?g rdf:type ontology:Q15989253 }
phosphatidate cytidylyltransferase    FN1308
action filter_type
action find
entity phosphatidate cytidylyltransferase    FN1308
relation cell component
type part
['phosphatidate cytidylyltransferase    FN1308', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?g WHERE { resource:phosphatidate_cytidylyltransferase____FN1308 property:cell_component ?g . ?g rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q23460209,P681,c(Q15989253))
action filter_type
action find
entity Q23460209
relation P681
type Q15989253
A component of phosphatidate cytidylyltransferase FN1308 is a [ANSWER]
['Q23460209', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?g WHERE { resource:Q23460209 property:P681 ?g . ?g rdf:type ontology:Q15989253 }
membrane
A component of phosphatidate cytidylyltransferase FN1308 is a membrane
membrane
action filter_type
action find
entity phosphatidate cytidylyltransferase    FN1308
relation cell component
type part
['phosphatidate cytidylyltransferase    FN1308', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?g WHERE { resource:phosphatidate_cytidylyltransferase____FN1308 property:cell_component ?g . ?g rdf:type ontology:part }
[]