Simple Question (Direct)
Simple Question
Q27551303
P702
Q863908
USER
Which nucleic acid sequence encodes Elongator subunit IKI1 YHR187W ?
(Q27551303,P702,c(Q863908))
action filter_type
action find
entity Q27551303
relation P702
type Q863908
['Q27551303', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q27551303 property:P702 ?n . ?n rdf:type ontology:Q863908 }
Elongator subunit IKI1 YHR187W
action filter_type
action find
entity Elongator subunit IKI1 YHR187W
relation encoded by
type nucleic acid sequence
['Elongator subunit IKI1 YHR187W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:Elongator_subunit_IKI1_YHR187W property:encoded_by ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27544237
SYSTEM
Elongator subunit IKI1 YHR187W
Q27544237
(Q27551303,P702,c(Q863908))
action filter_type
action find
entity Q27551303
relation P702
type Q863908
[ANSWER] encodes [ANSWER]
['Q27551303', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?n WHERE { resource:Q27551303 property:P702 ?n . ?n rdf:type ontology:Q863908 }
Elongator subunit IKI1 YHR187W
Elongator subunit IKI1 YHR187W encodes Elongator subunit IKI1 YHR187W
Elongator subunit IKI1 YHR187W
action filter_type
action find
entity Elongator subunit IKI1 YHR187W
relation encoded by
type nucleic acid sequence
['Elongator subunit IKI1 YHR187W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?n WHERE { resource:Elongator_subunit_IKI1_YHR187W property:encoded_by ?n . ?n rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27551303
P703
Q631147
USER
Which taxon does that nutrient belong to ?
(Q27544237,P703,c(Q631147))
action filter_type
action find
entity Q27551303
relation P703
type Q631147
['Q27544237', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q27551303 property:P703 ?d . ?d rdf:type ontology:Q631147 }
Elongator subunit IKI1 YHR187W
action filter_type
action find
entity Elongator subunit IKI1 YHR187W
relation found in taxon
type infraspecific name
['Elongator subunit IKI1 YHR187W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:Elongator_subunit_IKI1_YHR187W property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27544237,P703,c(Q631147))
action filter_type
action find
entity Q27551303
relation P703
type Q631147
That nutrient belongs to [ANSWER]
['Q27544237', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { resource:Q27551303 property:P703 ?d . ?d rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
That nutrient belongs to Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
action filter_type
action find
entity Elongator subunit IKI1 YHR187W
relation found in taxon
type infraspecific name
['Elongator subunit IKI1 YHR187W', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { resource:Elongator_subunit_IKI1_YHR187W property:found_in_taxon ?d . ?d rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q79899 Q27544237
P702 P681
Q181394
USER
Which nutrients are encoded by Elongator subunit IKI1 YHR187W and are cytoplasm a cell component of ?
AND((c(Q181394),P702,Q27544237), (c(Q181394),P681,Q79899))
action filter_type
action intersection
action find_reverse
entity Q27544237
relation P702
action find_reverse
entity Q79899
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q27544237'], [{'concept': 'Q181394'}, 'P681', 'Q79899']]}
SELECT DISTINCT ?u WHERE { ?u property:P702 resource:Q27544237 . ?u property:P681 resource:Q79899 . ?u rdf:type ontology:Q181394 }
cytoplasm Elongator subunit IKI1 YHR187W
action filter_type
action intersection
action find_reverse
entity Elongator subunit IKI1 YHR187W
relation encoded by
action find_reverse
entity cytoplasm
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'Elongator subunit IKI1 YHR187W'], [{'concept': 'nutrient'}, 'cell component', 'cytoplasm']]}
SELECT DISTINCT ?u WHERE { ?u property:encoded_by resource:Elongator_subunit_IKI1_YHR187W . ?u property:cell_component resource:cytoplasm . ?u rdf:type ontology:nutrient }
[]
nutrient
Q27551303
SYSTEM
Elongator subunit IKI1 YHR187W
Q27551303
AND((c(Q181394),P702,Q27544237), (c(Q181394),P681,Q79899))
action filter_type
action intersection
action find_reverse
entity Q27544237
relation P702
action find_reverse
entity Q79899
relation P681
type Q181394
[ANSWER] is encoded by [ANSWER] and is cytoplasm a cell component of
{'AND': [[{'concept': 'Q181394'}, 'P702', 'Q27544237'], [{'concept': 'Q181394'}, 'P681', 'Q79899']]}
SELECT DISTINCT ?u WHERE { ?u property:P702 resource:Q27544237 . ?u property:P681 resource:Q79899 . ?u rdf:type ontology:Q181394 }
Elongator subunit IKI1 YHR187W
Elongator subunit IKI1 YHR187W is encoded by Elongator subunit IKI1 YHR187W and is cytoplasm a cell component of
Elongator subunit IKI1 YHR187W
action filter_type
action intersection
action find_reverse
entity Elongator subunit IKI1 YHR187W
relation encoded by
action find_reverse
entity cytoplasm
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'encoded by', 'Elongator subunit IKI1 YHR187W'], [{'concept': 'nutrient'}, 'cell component', 'cytoplasm']]}
SELECT DISTINCT ?u WHERE { ?u property:encoded_by resource:Elongator_subunit_IKI1_YHR187W . ?u property:cell_component resource:cytoplasm . ?u rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27551303
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q27551303)
action filter_type
action find_reverse
entity Q27551303
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27551303']
SELECT DISTINCT ?o WHERE { ?o property:P688 resource:Q27551303 . ?o rdf:type ontology:Q863908 }
Elongator subunit IKI1 YHR187W
action filter_type
action find_reverse
entity Elongator subunit IKI1 YHR187W
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Elongator subunit IKI1 YHR187W']
SELECT DISTINCT ?o WHERE { ?o property:encodes resource:Elongator_subunit_IKI1_YHR187W . ?o rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27544237
SYSTEM
Elongator subunit IKI1 YHR187W
Q27544237
(c(Q863908),P688,Q27551303)
action filter_type
action find_reverse
entity Q27551303
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q27551303']
SELECT DISTINCT ?o WHERE { ?o property:P688 resource:Q27551303 . ?o rdf:type ontology:Q863908 }
Elongator subunit IKI1 YHR187W
Elongator subunit IKI1 YHR187W encodes that nutrient
Elongator subunit IKI1 YHR187W
action filter_type
action find_reverse
entity Elongator subunit IKI1 YHR187W
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Elongator subunit IKI1 YHR187W']
SELECT DISTINCT ?o WHERE { ?o property:encodes resource:Elongator_subunit_IKI1_YHR187W . ?o rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q181394 Q79529
USER
How many nutrients do around 10 nutrients or chemical substances interact with ?
(c(Q181394)|c(Q79529),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
value 10
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?o ) WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?m ) ?v WHERE { VALUES ( ?f ) { ( ontology:Q181394 ) ( ontology:Q79529 ) } . ?s rdf:type ?f } GROUP BY ?v } . FILTER ( ?m = 10 ) }
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 10
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?o ) WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?m ) ?v WHERE { VALUES ( ?f ) { ( ontology:nutrient ) ( ontology:chemical_substance ) } . ?s rdf:type ?f } GROUP BY ?v } . FILTER ( ?m = 10 ) }
[]
nutrient nutrient chemical substance
SYSTEM
62
Q21115605 Q21110942 Q21116154 Q309513 Q308856 Q12746346 Q4847910 Q413209 Q21154358 Q5123372 Q21108624 Q21172390 Q1486720 Q1084878 Q14900999 Q21109365 Q15323278 Q21110867 Q4847900 Q4847907 Q416601 Q5512777 Q4734884 Q21116164 Q2844056 Q5773155 Q21115334 Q21173406 Q4859538 Q4734894 Q21110872 Q4734892 Q4734891 Q21131500 Q21132652 Q7673856 Q21115961 Q21115962 Q21115965 Q311568 Q3062781 Q12746120 Q11071075 Q5629167 Q21115815 Q21115816 Q21115819 Q7834290 Q21114585 Q21497939 Q21497937 Q21122435 Q5009781 Q21130911 Q21150595 Q15324694 Q21201294 Q7671477 Q21109359 Q21983336 Q15324415 Q2034004
(c(Q181394)|c(Q79529),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
value 10
[ANSWER]
[[{'concept': 'Q181394'}, {'concept': 'Q79529'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?o ) WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?m ) ?v WHERE { VALUES ( ?f ) { ( ontology:Q181394 ) ( ontology:Q79529 ) } . ?s rdf:type ?f } GROUP BY ?v } . FILTER ( ?m = 10 ) }
Vascular endothelial growth factor receptor 1 G-protein coupled receptor 55 Adenosine receptor A3 Histamine H1 receptor D(4) dopamine receptor Nociceptin receptor Muscarinic acetylcholine receptor M2 Transient receptor potential cation channel subfamily V member 1 Histone deacetylase 3 Mu-type opioid receptor Platelet-derived growth factor receptor beta Vascular endothelial growth factor receptor 2 Glutamate receptor 3 Peroxisome proliferator-activated receptor gamma Kappa-type opioid receptor 5-hydroxytryptamine receptor 4 Transient receptor potential cation channel subfamily A member 1 D(1A) dopamine receptor Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 Androgen receptor Gamma-aminobutyric acid receptor subunit alpha-4 Alpha-1A adrenergic receptor Adenosine receptor A2b Muscarinic acetylcholine receptor M3 Histone deacetylase 2 Delta-type opioid receptor Histone deacetylase 8 Metabotropic glutamate receptor 2 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Alpha-2C adrenergic receptor D(1B) dopamine receptor Glucose-dependent insulinotropic receptor Substance-P receptor Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Histamine H2 receptor Adenosine receptor A1 Muscarinic acetylcholine receptor M5 Trace amine-associated receptor 1 Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-6 5-hydroxytryptamine receptor 7 5-hydroxytryptamine receptor 5A Orexin receptor type 2 Receptor-type tyrosine-protein kinase FLT3 Glutamate receptor ionotropic, NMDA 2D Cannabinoid receptor 2 Transient receptor potential cation channel subfamily V member 3 Cannabinoid receptor 1 Transient receptor potential cation channel subfamily M member 2 5-hydroxytryptamine receptor 5A Histamine H3 receptor Transient receptor potential cation channel subfamily M member 8 D(2) dopamine receptor
62
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
value 10
[[{'concept': 'nutrient'}, {'concept': 'chemical substance'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?v ) AS ?o ) WHERE { { SELECT DISTINCT ( COUNT ( ?s ) AS ?m ) ?v WHERE { VALUES ( ?f ) { ( ontology:nutrient ) ( ontology:chemical_substance ) } . ?s rdf:type ?f } GROUP BY ?v } . FILTER ( ?m = 10 ) }
[]