Simple Question (Direct)
Simple Question
Q22258353
P680
Q44424
USER
What represents the molecular function of glycerol-3-phosphate cytidyltransferase    LBA0518 ?
(Q22258353,P680,c(Q44424))
action filter_type
action find
entity Q22258353
relation P680
type Q44424
['Q22258353', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?n WHERE { resource:Q22258353 property:P680 ?n . ?n rdf:type ontology:Q44424 }
glycerol-3-phosphate cytidyltransferase    LBA0518
action filter_type
action find
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation molecular function
type chemical bond
['glycerol-3-phosphate cytidyltransferase    LBA0518', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?n WHERE { resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 property:molecular_function ?n . ?n rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380
SYSTEM
metal ion binding
Q13667380
(Q22258353,P680,c(Q44424))
action filter_type
action find
entity Q22258353
relation P680
type Q44424
The [ANSWER] represents the molecular function of glycerol-3-phosphate cytidyltransferase LBA0518
['Q22258353', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?n WHERE { resource:Q22258353 property:P680 ?n . ?n rdf:type ontology:Q44424 }
metal ion binding
The metal ion binding represents the molecular function of glycerol-3-phosphate cytidyltransferase LBA0518
metal ion binding
action filter_type
action find
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation molecular function
type chemical bond
['glycerol-3-phosphate cytidyltransferase    LBA0518', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?n WHERE { resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 property:molecular_function ?n . ?n rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22258353
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by glycerol-3-phosphate cytidyltransferase    LBA0518 ?
(c(Q863908),P688,Q22258353)
action filter_type
action find_reverse
entity Q22258353
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q22258353']
SELECT DISTINCT ?y WHERE { ?y property:P688 resource:Q22258353 . ?y rdf:type ontology:Q863908 }
glycerol-3-phosphate cytidyltransferase    LBA0518
action filter_type
action find_reverse
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'glycerol-3-phosphate cytidyltransferase    LBA0518']
SELECT DISTINCT ?y WHERE { ?y property:encodes resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 . ?y rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q22239300
SYSTEM
glycerol-3-phosphate cytidyltransferase    LBA0518
Q22239300
(c(Q863908),P688,Q22258353)
action filter_type
action find_reverse
entity Q22258353
relation P688
type Q863908
The nucleic acid sequence that is encoded by glycerol-3-phosphate cytidyltransferase LBA0518 is by glycerol-3-phosphate cytidyltransferase LBA0518
[{'concept': 'Q863908'}, 'P688', 'Q22258353']
SELECT DISTINCT ?y WHERE { ?y property:P688 resource:Q22258353 . ?y rdf:type ontology:Q863908 }
glycerol-3-phosphate cytidyltransferase    LBA0518
The nucleic acid sequence that is encoded by glycerol-3-phosphate cytidyltransferase LBA0518 is by glycerol-3-phosphate cytidyltransferase LBA0518
glycerol-3-phosphate cytidyltransferase    LBA0518
action filter_type
action find_reverse
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'glycerol-3-phosphate cytidyltransferase    LBA0518']
SELECT DISTINCT ?y WHERE { ?y property:encodes resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 . ?y rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q22239300
P702
Q181394
USER
Which nutrient is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q22239300)
action filter_type
action find_reverse
entity Q22239300
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q22239300']
SELECT DISTINCT ?u WHERE { ?u property:P702 resource:Q22239300 . ?u rdf:type ontology:Q181394 }
glycerol-3-phosphate cytidyltransferase    LBA0518
action filter_type
action find_reverse
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'glycerol-3-phosphate cytidyltransferase    LBA0518']
SELECT DISTINCT ?u WHERE { ?u property:encoded_by resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 . ?u rdf:type ontology:nutrient }
[]
nutrient
Q22258353
SYSTEM
glycerol-3-phosphate cytidyltransferase    LBA0518
Q22258353
(c(Q181394),P702,Q22239300)
action filter_type
action find_reverse
entity Q22239300
relation P702
type Q181394
The glycerol-3-phosphate cytidyltransferase LBA0518 is encoded by that nucleic acid sequence
[{'concept': 'Q181394'}, 'P702', 'Q22239300']
SELECT DISTINCT ?u WHERE { ?u property:P702 resource:Q22239300 . ?u rdf:type ontology:Q181394 }
glycerol-3-phosphate cytidyltransferase    LBA0518
The glycerol-3-phosphate cytidyltransferase LBA0518 is encoded by that nucleic acid sequence
glycerol-3-phosphate cytidyltransferase    LBA0518
action filter_type
action find_reverse
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'glycerol-3-phosphate cytidyltransferase    LBA0518']
SELECT DISTINCT ?u WHERE { ?u property:encoded_by resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 . ?u rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22239300
P703
Q631147
USER
Which taxon does glycerol-3-phosphate cytidyltransferase    LBA0518 belong to ?
(Q22239300,P703,c(Q631147))
action filter_type
action find
entity Q22239300
relation P703
type Q631147
['Q22239300', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?y WHERE { resource:Q22239300 property:P703 ?y . ?y rdf:type ontology:Q631147 }
glycerol-3-phosphate cytidyltransferase    LBA0518
action filter_type
action find
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation found in taxon
type infraspecific name
['glycerol-3-phosphate cytidyltransferase    LBA0518', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?y WHERE { resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 property:found_in_taxon ?y . ?y rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102977
SYSTEM
Lactobacillus acidophilus NCFM
Q21102977
(Q22239300,P703,c(Q631147))
action filter_type
action find
entity Q22239300
relation P703
type Q631147
Glycerol-3-phosphate cytidyltransferase LBA0518 belongs to the [ANSWER]
['Q22239300', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?y WHERE { resource:Q22239300 property:P703 ?y . ?y rdf:type ontology:Q631147 }
Lactobacillus acidophilus NCFM
Glycerol-3-phosphate cytidyltransferase LBA0518 belongs to the Lactobacillus acidophilus NCFM
Lactobacillus acidophilus NCFM
action filter_type
action find
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation found in taxon
type infraspecific name
['glycerol-3-phosphate cytidyltransferase    LBA0518', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?y WHERE { resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 property:found_in_taxon ?y . ?y rdf:type ontology:infraspecific_name }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23429481
Q631147
USER
And also tell me about ATP-dependent RNA helicase RhlB    AHA_0097?
(Q23429481,P703,c(Q631147))
action filter_type
action find
entity Q23429481
relation P703
type Q631147
['Q23429481', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?r WHERE { resource:Q23429481 property:P703 ?r . ?r rdf:type ontology:Q631147 }
ATP-dependent RNA helicase RhlB    AHA_0097
action filter_type
action find
entity ATP-dependent RNA helicase RhlB    AHA_0097
relation found in taxon
type infraspecific name
['ATP-dependent RNA helicase RhlB    AHA_0097', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?r WHERE { resource:ATP-dependent_RNA_helicase_RhlB____AHA_0097 property:found_in_taxon ?r . ?r rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102944
SYSTEM
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Q21102944
(Q23429481,P703,c(Q631147))
action filter_type
action find
entity Q23429481
relation P703
type Q631147
[ANSWER]
['Q23429481', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?r WHERE { resource:Q23429481 property:P703 ?r . ?r rdf:type ontology:Q631147 }
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Aeromonas hydrophila subsp. hydrophila ATCC 7966
action filter_type
action find
entity ATP-dependent RNA helicase RhlB    AHA_0097
relation found in taxon
type infraspecific name
['ATP-dependent RNA helicase RhlB    AHA_0097', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?r WHERE { resource:ATP-dependent_RNA_helicase_RhlB____AHA_0097 property:found_in_taxon ?r . ?r rdf:type ontology:infraspecific_name }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q21102944 Q24139112
P703
Q181394
USER
Is cytochrome o ubiquinol oxidase subunit I    b0431 found in that infraspecific name ?
(Q24139112,P703,Q21102944)
action is_in
entity Q24139112
action find
entity Q21102944
relation P703
['Q24139112', 'P703', 'Q21102944']
ASK WHERE { resource:Q21102944 property:P703 resource:Q24139112 }
Aeromonas hydrophila subsp. hydrophila ATCC 7966 cytochrome o ubiquinol oxidase subunit I    b0431
action is_in
entity cytochrome o ubiquinol oxidase subunit I    b0431
action find
entity Aeromonas hydrophila subsp. hydrophila ATCC 7966
relation found in taxon
['cytochrome o ubiquinol oxidase subunit I    b0431', 'found in taxon', 'Aeromonas hydrophila subsp. hydrophila ATCC 7966']
ASK WHERE { resource:Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 property:found_in_taxon resource:cytochrome_o_ubiquinol_oxidase_subunit_I____b0431 }
[]
nutrient
SYSTEM
NO
(Q24139112,P703,Q21102944)
action is_in
entity Q24139112
action find
entity Q21102944
relation P703
[ANSWER]
['Q24139112', 'P703', 'Q21102944']
ASK WHERE { resource:Q21102944 property:P703 resource:Q24139112 }
No
action is_in
entity cytochrome o ubiquinol oxidase subunit I    b0431
action find
entity Aeromonas hydrophila subsp. hydrophila ATCC 7966
relation found in taxon
['cytochrome o ubiquinol oxidase subunit I    b0431', 'found in taxon', 'Aeromonas hydrophila subsp. hydrophila ATCC 7966']
ASK WHERE { resource:Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 property:found_in_taxon resource:cytochrome_o_ubiquinol_oxidase_subunit_I____b0431 }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q22239300 Q22258353
P688
Q181394
USER
Is that nucleic acid sequence an encoding of glycerol-3-phosphate cytidyltransferase    LBA0518 ?
(Q22239300,P688,Q22258353)
action is_in
entity Q22258353
action find
entity Q22239300
relation P688
['Q22239300', 'P688', 'Q22258353']
ASK WHERE { resource:Q22239300 property:P688 resource:Q22258353 }
glycerol-3-phosphate cytidyltransferase    LBA0518 glycerol-3-phosphate cytidyltransferase    LBA0518
action is_in
entity glycerol-3-phosphate cytidyltransferase    LBA0518
action find
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation encodes
['glycerol-3-phosphate cytidyltransferase    LBA0518', 'encodes', 'glycerol-3-phosphate cytidyltransferase    LBA0518']
ASK WHERE { resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 property:encodes resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 }
[]
nutrient
SYSTEM
YES
(Q22239300,P688,Q22258353)
action is_in
entity Q22258353
action find
entity Q22239300
relation P688
[ANSWER]
['Q22239300', 'P688', 'Q22258353']
ASK WHERE { resource:Q22239300 property:P688 resource:Q22258353 }
Yes
action is_in
entity glycerol-3-phosphate cytidyltransferase    LBA0518
action find
entity glycerol-3-phosphate cytidyltransferase    LBA0518
relation encodes
['glycerol-3-phosphate cytidyltransferase    LBA0518', 'encodes', 'glycerol-3-phosphate cytidyltransferase    LBA0518']
ASK WHERE { resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 property:encodes resource:glycerol-3-phosphate_cytidyltransferase____LBA0518 }
[]