Simple Question (Direct)
Simple Question
Q24133556
P681
Q15989253
USER
What is a component of acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988 ?
(Q24133556,P681,c(Q15989253))
action filter_type
action find
entity Q24133556
relation P681
type Q15989253
['Q24133556', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?z WHERE { resource:Q24133556 property:P681 ?z . ?z rdf:type ontology:Q15989253 }
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
action filter_type
action find
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation cell component
type part
['acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?z WHERE { resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 property:cell_component ?z . ?z rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q24133556,P681,c(Q15989253))
action filter_type
action find
entity Q24133556
relation P681
type Q15989253
A component of acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL_00988 is a [ANSWER]
['Q24133556', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?z WHERE { resource:Q24133556 property:P681 ?z . ?z rdf:type ontology:Q15989253 }
cytoplasm
A component of acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL_00988 is a cytoplasm
cytoplasm
action filter_type
action find
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation cell component
type part
['acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?z WHERE { resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 property:cell_component ?z . ?z rdf:type ontology:part }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24133556
P703
Q631147
USER
Where is that nutrient found ?
(Q79899,P703,c(Q631147))
action filter_type
action find
entity Q24133556
relation P703
type Q631147
['Q79899', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?b WHERE { resource:Q24133556 property:P703 ?b . ?b rdf:type ontology:Q631147 }
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
action filter_type
action find
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation found in taxon
type infraspecific name
['cytoplasm', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?b WHERE { resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102928
SYSTEM
Enterobacter cloacae subsp. cloacae ATCC 13047
Q21102928
(Q79899,P703,c(Q631147))
action filter_type
action find
entity Q24133556
relation P703
type Q631147
That nutrient is found in [ANSWER]
['Q79899', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?b WHERE { resource:Q24133556 property:P703 ?b . ?b rdf:type ontology:Q631147 }
Enterobacter cloacae subsp. cloacae ATCC 13047
That nutrient is found in Enterobacter cloacae subsp. cloacae ATCC 13047
Enterobacter cloacae subsp. cloacae ATCC 13047
action filter_type
action find
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation found in taxon
type infraspecific name
['cytoplasm', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?b WHERE { resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24133556
P702
Q863908
USER
Which nucleic acid sequence encodes acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988 ?
(Q24133556,P702,c(Q863908))
action filter_type
action find
entity Q24133556
relation P702
type Q863908
['Q24133556', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q24133556 property:P702 ?c . ?c rdf:type ontology:Q863908 }
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
action filter_type
action find
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation encoded by
type nucleic acid sequence
['acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23081526
SYSTEM
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
Q23081526
(Q24133556,P702,c(Q863908))
action filter_type
action find
entity Q24133556
relation P702
type Q863908
Acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL 00988 encodes acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL_00988
['Q24133556', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q24133556 property:P702 ?c . ?c rdf:type ontology:Q863908 }
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
Acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL 00988 encodes acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL_00988
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
action filter_type
action find
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation encoded by
type nucleic acid sequence
['acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24133556
P688
Q863908
USER
Which nucleic acid sequence encodes acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988 ?
(c(Q863908),P688,Q24133556)
action filter_type
action find_reverse
entity Q24133556
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24133556']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q24133556 . ?t rdf:type ontology:Q863908 }
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
action filter_type
action find_reverse
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 . ?t rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23081526
SYSTEM
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
Q23081526
(c(Q863908),P688,Q24133556)
action filter_type
action find_reverse
entity Q24133556
relation P688
type Q863908
Acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL 00988 encodes acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL_00988
[{'concept': 'Q863908'}, 'P688', 'Q24133556']
SELECT DISTINCT ?t WHERE { ?t property:P688 resource:Q24133556 . ?t rdf:type ontology:Q863908 }
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
Acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL 00988 encodes acetyl-CoA carboxylase carboxyltransferase subunit alpha ECL_00988
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
action filter_type
action find_reverse
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988']
SELECT DISTINCT ?t WHERE { ?t property:encodes resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 . ?t rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q24133556
P682
Q1057
USER
Which metabolic process is that nutrient involved in ?
(Q23081526,P682,c(Q1057))
action filter_type
action find
entity Q24133556
relation P682
type Q1057
['Q23081526', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?m WHERE { resource:Q24133556 property:P682 ?m . ?m rdf:type ontology:Q1057 }
acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
action filter_type
action find
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation biological process
type metabolic process
['acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?m WHERE { resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 property:biological_process ?m . ?m rdf:type ontology:metabolic_process }
[]
metabolic process
Q14349667
SYSTEM
lipid metabolic process
Q14349667
(Q23081526,P682,c(Q1057))
action filter_type
action find
entity Q24133556
relation P682
type Q1057
That nutrient is the [ANSWER]
['Q23081526', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?m WHERE { resource:Q24133556 property:P682 ?m . ?m rdf:type ontology:Q1057 }
lipid metabolic process
That nutrient is the lipid metabolic process
lipid metabolic process
action filter_type
action find
entity acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988
relation biological process
type metabolic process
['acetyl-CoA carboxylase carboxyltransferase subunit alpha    ECL_00988', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?m WHERE { resource:acetyl-CoA_carboxylase_carboxyltransferase_subunit_alpha____ECL_00988 property:biological_process ?m . ?m rdf:type ontology:metabolic_process }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q14349667 Q22300352
P682
Q181394
USER
Is flagellar biosynthesis protein FlhB    Cj0335 involved in the biologicail process that one ?
(Q22300352,P682,Q14349667)
action is_in
entity Q22300352
action find
entity Q14349667
relation P682
['Q22300352', 'P682', 'Q14349667']
ASK WHERE { resource:Q14349667 property:P682 resource:Q22300352 }
lipid metabolic process flagellar biosynthesis protein FlhB    Cj0335
action is_in
entity flagellar biosynthesis protein FlhB    Cj0335
action find
entity lipid metabolic process
relation biological process
['flagellar biosynthesis protein FlhB    Cj0335', 'biological process', 'lipid metabolic process']
ASK WHERE { resource:lipid_metabolic_process property:biological_process resource:flagellar_biosynthesis_protein_FlhB____Cj0335 }
[]
nutrient
SYSTEM
NO
(Q22300352,P682,Q14349667)
action is_in
entity Q22300352
action find
entity Q14349667
relation P682
[ANSWER]
['Q22300352', 'P682', 'Q14349667']
ASK WHERE { resource:Q14349667 property:P682 resource:Q22300352 }
No
action is_in
entity flagellar biosynthesis protein FlhB    Cj0335
action find
entity lipid metabolic process
relation biological process
['flagellar biosynthesis protein FlhB    Cj0335', 'biological process', 'lipid metabolic process']
ASK WHERE { resource:lipid_metabolic_process property:biological_process resource:flagellar_biosynthesis_protein_FlhB____Cj0335 }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23064506 Q22300352
P688
Q863908
USER
Which nucleic acid sequences encodes flagellar biosynthesis protein FlhB    Cj0335 or antimicrobial peptide ABC transporter ATP-binding protein    LA_3713 ?
OR((c(Q863908),P688,Q22300352), (c(Q863908),P688,Q23064506))
action filter_type
action union
action find_reverse
entity Q22300352
relation P688
action find_reverse
entity Q23064506
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q22300352'], [{'concept': 'Q863908'}, 'P688', 'Q23064506']]}
SELECT DISTINCT ?y WHERE { { { ?y property:P688 resource:Q23064506 } UNION { ?y property:P688 resource:Q22300352 } } . ?y rdf:type ontology:Q863908 }
antimicrobial peptide ABC transporter ATP-binding protein    LA_3713 flagellar biosynthesis protein FlhB    Cj0335
action filter_type
action union
action find_reverse
entity flagellar biosynthesis protein FlhB    Cj0335
relation encodes
action find_reverse
entity antimicrobial peptide ABC transporter ATP-binding protein    LA_3713
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'flagellar biosynthesis protein FlhB    Cj0335'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'antimicrobial peptide ABC transporter ATP-binding protein    LA_3713']]}
SELECT DISTINCT ?y WHERE { { { ?y property:encodes resource:antimicrobial_peptide_ABC_transporter_ATP-binding_protein____LA_3713 } UNION { ?y property:encodes resource:flagellar_biosynthesis_protein_FlhB____Cj0335 } } . ?y rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q22296329 Q23025270
SYSTEM
flagellar biosynthesis protein FlhB    Cj0335, antimicrobial peptide ABC transporter ATP-binding protein    LA_3713
Q22296329 Q23025270
OR((c(Q863908),P688,Q22300352), (c(Q863908),P688,Q23064506))
action filter_type
action union
action find_reverse
entity Q22300352
relation P688
action find_reverse
entity Q23064506
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q22300352'], [{'concept': 'Q863908'}, 'P688', 'Q23064506']]}
SELECT DISTINCT ?y WHERE { { { ?y property:P688 resource:Q23064506 } UNION { ?y property:P688 resource:Q22300352 } } . ?y rdf:type ontology:Q863908 }
flagellar biosynthesis protein FlhB    Cj0335 antimicrobial peptide ABC transporter ATP-binding protein    LA_3713
Flagellar biosynthesis protein FlhB Cj0335 and antimicrobial peptide ABC transporter ATP-binding protein LA 3713 encode flagellar biosynthesis protein FlhB Cj0335 or antimicrobial peptide ABC transporter ATP-binding protein LA_3713
flagellar biosynthesis protein FlhB    Cj0335 antimicrobial peptide ABC transporter ATP-binding protein    LA_3713
action filter_type
action union
action find_reverse
entity flagellar biosynthesis protein FlhB    Cj0335
relation encodes
action find_reverse
entity antimicrobial peptide ABC transporter ATP-binding protein    LA_3713
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'flagellar biosynthesis protein FlhB    Cj0335'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'antimicrobial peptide ABC transporter ATP-binding protein    LA_3713']]}
SELECT DISTINCT ?y WHERE { { { ?y property:encodes resource:antimicrobial_peptide_ABC_transporter_ATP-binding_protein____LA_3713 } UNION { ?y property:encodes resource:flagellar_biosynthesis_protein_FlhB____Cj0335 } } . ?y rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q22296329 Q18030474
P688
Q181394
USER
How many nutrients do flagellar biosynthesis protein FlhB    Cj0335 or CFP encode ?
(Q22296329,P688,c(Q181394)) (Q18030474,P688,c(Q181394))
action count
action union
action filter_type
action find
entity Q22296329
relation P688
type Q181394
action filter_type
action find
entity Q18030474
relation P688
type Q181394
['Q22296329', 'P688', {'concept': 'Q181394'}] ['Q18030474', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?z ) WHERE { { resource:Q22296329 property:P688 ?b . ?b rdf:type ontology:Q181394 } UNION { resource:Q18030474 property:P688 ?b . ?b rdf:type ontology:Q181394 } }
flagellar biosynthesis protein FlhB    Cj0335 CFP
action count
action union
action filter_type
action find
entity flagellar biosynthesis protein FlhB    Cj0335
relation encodes
type nutrient
action filter_type
action find
entity CFP
relation encodes
type nutrient
['flagellar biosynthesis protein FlhB    Cj0335', 'encodes', {'concept': 'nutrient'}] ['CFP', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?z ) WHERE { { resource:flagellar_biosynthesis_protein_FlhB____Cj0335 property:encodes ?b . ?b rdf:type ontology:nutrient } UNION { resource:CFP property:encodes ?b . ?b rdf:type ontology:nutrient } }
[]
nutrient
SYSTEM
2
Q22677535 Q22300352
(Q22296329,P688,c(Q181394)) (Q18030474,P688,c(Q181394))
action count
action union
action filter_type
action find
entity Q22296329
relation P688
type Q181394
action filter_type
action find
entity Q18030474
relation P688
type Q181394
[ANSWER]
['Q22296329', 'P688', {'concept': 'Q181394'}] ['Q18030474', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?z ) WHERE { { resource:Q22296329 property:P688 ?b . ?b rdf:type ontology:Q181394 } UNION { resource:Q18030474 property:P688 ?b . ?b rdf:type ontology:Q181394 } }
Properdin flagellar biosynthesis protein FlhB    Cj0335
2
action count
action union
action filter_type
action find
entity flagellar biosynthesis protein FlhB    Cj0335
relation encodes
type nutrient
action filter_type
action find
entity CFP
relation encodes
type nutrient
['flagellar biosynthesis protein FlhB    Cj0335', 'encodes', {'concept': 'nutrient'}] ['CFP', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?z ) WHERE { { resource:flagellar_biosynthesis_protein_FlhB____Cj0335 property:encodes ?b . ?b rdf:type ontology:nutrient } UNION { resource:CFP property:encodes ?b . ?b rdf:type ontology:nutrient } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23025270 Q23214826
P703
Q631147
USER
How many infraspecific names are the taxon to which antimicrobial peptide ABC transporter ATP-binding protein    LA_3713 or hypothetical protein    SSUBM407_0638 belongs to ?
(Q23025270,P703,c(Q631147)) (Q23214826,P703,c(Q631147))
action count
action union
action filter_type
action find
entity Q23025270
relation P703
type Q631147
action filter_type
action find
entity Q23214826
relation P703
type Q631147
['Q23025270', 'P703', {'concept': 'Q631147'}] ['Q23214826', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?q ) WHERE { { resource:Q23025270 property:P703 ?g . ?g rdf:type ontology:Q631147 } UNION { resource:Q23214826 property:P703 ?g . ?g rdf:type ontology:Q631147 } }
antimicrobial peptide ABC transporter ATP-binding protein    LA_3713 hypothetical protein    SSUBM407_0638
action count
action union
action filter_type
action find
entity antimicrobial peptide ABC transporter ATP-binding protein    LA_3713
relation found in taxon
type infraspecific name
action filter_type
action find
entity hypothetical protein    SSUBM407_0638
relation found in taxon
type infraspecific name
['antimicrobial peptide ABC transporter ATP-binding protein    LA_3713', 'found in taxon', {'concept': 'infraspecific name'}] ['hypothetical protein    SSUBM407_0638', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?q ) WHERE { { resource:antimicrobial_peptide_ABC_transporter_ATP-binding_protein____LA_3713 property:found_in_taxon ?g . ?g rdf:type ontology:infraspecific_name } UNION { resource:hypothetical_protein____SSUBM407_0638 property:found_in_taxon ?g . ?g rdf:type ontology:infraspecific_name } }
[]
infraspecific name
SYSTEM
2
Q21065229 Q21102960
(Q23025270,P703,c(Q631147)) (Q23214826,P703,c(Q631147))
action count
action union
action filter_type
action find
entity Q23025270
relation P703
type Q631147
action filter_type
action find
entity Q23214826
relation P703
type Q631147
[ANSWER]
['Q23025270', 'P703', {'concept': 'Q631147'}] ['Q23214826', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?q ) WHERE { { resource:Q23025270 property:P703 ?g . ?g rdf:type ontology:Q631147 } UNION { resource:Q23214826 property:P703 ?g . ?g rdf:type ontology:Q631147 } }
Leptospira interrogans serovar Lai str. 56601 Streptococcus suis BM407
2
action count
action union
action filter_type
action find
entity antimicrobial peptide ABC transporter ATP-binding protein    LA_3713
relation found in taxon
type infraspecific name
action filter_type
action find
entity hypothetical protein    SSUBM407_0638
relation found in taxon
type infraspecific name
['antimicrobial peptide ABC transporter ATP-binding protein    LA_3713', 'found in taxon', {'concept': 'infraspecific name'}] ['hypothetical protein    SSUBM407_0638', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?g ) AS ?q ) WHERE { { resource:antimicrobial_peptide_ABC_transporter_ATP-binding_protein____LA_3713 property:found_in_taxon ?g . ?g rdf:type ontology:infraspecific_name } UNION { resource:hypothetical_protein____SSUBM407_0638 property:found_in_taxon ?g . ?g rdf:type ontology:infraspecific_name } }
[]