Simple Question (Direct)
Simple Question
Q21992291
P681
Q5058355
USER
Which cellular components are the components of Vasohibin-1 ?
(Q21992291,P681,c(Q5058355))
action filter_type
action find
entity Q21992291
relation P681
type Q5058355
['Q21992291', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?d WHERE { resource:Q21992291 property:P681 ?d . ?d rdf:type ontology:Q5058355 }
Vasohibin-1
action filter_type
action find
entity Vasohibin-1
relation cell component
type cellular component
['Vasohibin-1', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?d WHERE { resource:Vasohibin-1 property:cell_component ?d . ?d rdf:type ontology:cellular_component }
[]
cellular component
Q2914458 Q79927 Q14349538
SYSTEM
extracellular space, endoplasmic reticulum, apical part of cell
Q2914458 Q79927 Q14349538
(Q21992291,P681,c(Q5058355))
action filter_type
action find
entity Q21992291
relation P681
type Q5058355
The components of Vasohibin-1 are in [ANSWERS]
['Q21992291', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?d WHERE { resource:Q21992291 property:P681 ?d . ?d rdf:type ontology:Q5058355 }
extracellular space endoplasmic reticulum apical part of cell
The components of Vasohibin-1 are in extracellular space, endoplasmic reticulum and apical part of cell
extracellular space endoplasmic reticulum apical part of cell
action filter_type
action find
entity Vasohibin-1
relation cell component
type cellular component
['Vasohibin-1', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?d WHERE { resource:Vasohibin-1 property:cell_component ?d . ?d rdf:type ontology:cellular_component }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q2914458 Q79927 Q14349538
P361
Q5058355
USER
Which cellular components are parts of extracellular space, endoplasmic reticulum and apical part of cell ?
(c(Q5058355),P361,Q2914458) (c(Q5058355),P361,Q79927) (c(Q5058355),P361,Q14349538)
action union
action filter_type
action find_reverse
entity Q2914458
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q79927
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q14349538
relation P361
type Q5058355
[{'concept': 'Q5058355'}, 'P361', 'Q2914458'] [{'concept': 'Q5058355'}, 'P361', 'Q79927'] [{'concept': 'Q5058355'}, 'P361', 'Q14349538']
SELECT DISTINCT ?s WHERE { VALUES ( ?n ) { ( resource:Q2914458 ) ( resource:Q79927 ) } . ?s property:P361 ?n }
extracellular space endoplasmic reticulum apical part of cell
action union
action filter_type
action find_reverse
entity extracellular space
relation part of
type cellular component
action filter_type
action find_reverse
entity endoplasmic reticulum
relation part of
type cellular component
action filter_type
action find_reverse
entity apical part of cell
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'extracellular space'] [{'concept': 'cellular component'}, 'part of', 'endoplasmic reticulum'] [{'concept': 'cellular component'}, 'part of', 'apical part of cell']
SELECT DISTINCT ?s WHERE { VALUES ( ?n ) { ( resource:extracellular_space ) ( resource:endoplasmic_reticulum ) } . ?s property:part_of ?n }
[]
cellular component
Q21107992 Q22327419 Q14906187
SYSTEM
ER ubiquitin ligase complex, inhibin complex, CRLF-CLCF1 complex
Q22327419 Q14906187 Q22327407 Q14863683 Q21136996 Q21095089 Q22327421 Q21120634 Q21120639 Q22325973 Q21971414 Q21108411 Q22325981 Q22327447 Q14819441 Q22327448 Q21116899 Q21107992 Q22329021 Q22328584
(c(Q5058355),P361,Q2914458) (c(Q5058355),P361,Q79927) (c(Q5058355),P361,Q14349538)
action union
action filter_type
action find_reverse
entity Q2914458
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q79927
relation P361
type Q5058355
action filter_type
action find_reverse
entity Q14349538
relation P361
type Q5058355
[ANSWERS] are parts of extracellular space, endoplasmic reticulum and apical part of cell
[{'concept': 'Q5058355'}, 'P361', 'Q2914458'] [{'concept': 'Q5058355'}, 'P361', 'Q79927'] [{'concept': 'Q5058355'}, 'P361', 'Q14349538']
SELECT DISTINCT ?s WHERE { VALUES ( ?n ) { ( resource:Q2914458 ) ( resource:Q79927 ) } . ?s property:P361 ?n }
inhibin complex CRLF-CLCF1 complex activin complex insulin-like growth factor binding protein complex immunoglobulin complex, circulating blood microparticle bursicon neuropeptide hormone complex interleukin-12 complex interleukin-23 complex larval serum protein complex plasma lipoprotein particle CNTFR-CLCF1 complex classical-complement-pathway C3/C5 convertase complex interleukin-27 complex fibrinogen complex interleukin-35 complex complement component C1 complex ER ubiquitin ligase complex apical complex Kibra-Ex-Mer complex
ER ubiquitin ligase complex, inhibin complex and CRLF-CLCF1 complex are parts of extracellular space, endoplasmic reticulum and apical part of cell
ER ubiquitin ligase complex inhibin complex CRLF-CLCF1 complex
action union
action filter_type
action find_reverse
entity extracellular space
relation part of
type cellular component
action filter_type
action find_reverse
entity endoplasmic reticulum
relation part of
type cellular component
action filter_type
action find_reverse
entity apical part of cell
relation part of
type cellular component
[{'concept': 'cellular component'}, 'part of', 'extracellular space'] [{'concept': 'cellular component'}, 'part of', 'endoplasmic reticulum'] [{'concept': 'cellular component'}, 'part of', 'apical part of cell']
SELECT DISTINCT ?s WHERE { VALUES ( ?n ) { ( resource:extracellular_space ) ( resource:endoplasmic_reticulum ) } . ?s property:part_of ?n }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21992291
P688
Q863908
USER
Which nucleic acid sequences encodes Vasohibin-1 ?
(c(Q863908),P688,Q21992291)
action filter_type
action find_reverse
entity Q21992291
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21992291']
SELECT DISTINCT ?g WHERE { ?g property:P688 resource:Q21992291 . ?g rdf:type ontology:Q863908 }
Vasohibin-1
action filter_type
action find_reverse
entity Vasohibin-1
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Vasohibin-1']
SELECT DISTINCT ?g WHERE { ?g property:encodes resource:Vasohibin-1 . ?g rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18298682 Q21838036
SYSTEM
Vash1, LOC105242496
Q18298682 Q21838036
(c(Q863908),P688,Q21992291)
action filter_type
action find_reverse
entity Q21992291
relation P688
type Q863908
[ANSWERS] encode Vasohibin-1
[{'concept': 'Q863908'}, 'P688', 'Q21992291']
SELECT DISTINCT ?g WHERE { ?g property:P688 resource:Q21992291 . ?g rdf:type ontology:Q863908 }
Vash1 LOC105242496
Vash1 and LOC105242496 encode Vasohibin-1
Vash1 LOC105242496
action filter_type
action find_reverse
entity Vasohibin-1
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Vasohibin-1']
SELECT DISTINCT ?g WHERE { ?g property:encodes resource:Vasohibin-1 . ?g rdf:type ontology:nucleic_acid_sequence }
[]
Clarification
Simple Question|Single Entity|Indirect
Q21838036
P703
Q16521
USER
Where is that nucleic acid sequence found ?
(Q21838036,P703,c(Q16521))
action filter_type
action find
entity Q21838036
relation P703
type Q16521
['Q21838036', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { resource:Q21838036 property:P703 ?i . ?i rdf:type ontology:Q16521 }
LOC105242496
action filter_type
action find
entity LOC105242496
relation found in taxon
type taxon
['LOC105242496', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { resource:LOC105242496 property:found_in_taxon ?i . ?i rdf:type ontology:taxon }
[]
taxon
Clarification for simple ques.
Q21838036
SYSTEM
Did you mean LOC105242496 ?
Q18298682 Q21838036
(Q18298682,P703,c(Q16521)) (Q21838036,P703,c(Q16521))
[ANSWER]
['Q18298682', 'P703', {'concept': 'Q16521'}] ['Q21838036', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { resource:Q21838036 property:P703 ?i . ?i rdf:type ontology:Q16521 }
Vash1 LOC105242496
Did you mean LOC105242496 ?
LOC105242496
['Vash1', 'found in taxon', {'concept': 'taxon'}] ['LOC105242496', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { resource:LOC105242496 property:found_in_taxon ?i . ?i rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
USER
Yes
(Q21838036,P703,c(Q16521))
['Q21838036', 'P703', {'concept': 'Q16521'}]
['LOC105242496', 'found in taxon', {'concept': 'taxon'}]
[]
Q83310
SYSTEM
Mus musculus
Q83310
(Q21838036,P703,c(Q16521))
action filter_type
action find
entity Q21838036
relation P703
type Q16521
That nucleic acid sequence is found in [ANSWER]
['Q21838036', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { resource:Q21838036 property:P703 ?i . ?i rdf:type ontology:Q16521 }
Mus musculus
That nucleic acid sequence is found in Mus musculus
Mus musculus
action filter_type
action find
entity LOC105242496
relation found in taxon
type taxon
['LOC105242496', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { resource:LOC105242496 property:found_in_taxon ?i . ?i rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q83310 Q21992068
P703
Q181394
USER
Does Zinc finger protein 276 specy belongs to the taxon that one ?
(Q21992068,P703,Q83310)
action is_in
entity Q83310
action find
entity Q21992068
relation P703
['Q21992068', 'P703', 'Q83310']
ASK WHERE { resource:Q21992068 property:P703 resource:Q83310 }
Mus musculus Zinc finger protein 276
action is_in
entity Mus musculus
action find
entity Zinc finger protein 276
relation found in taxon
['Zinc finger protein 276', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Zinc_finger_protein_276 property:found_in_taxon resource:Mus_musculus }
[]
nutrient
SYSTEM
YES
(Q21992068,P703,Q83310)
action is_in
entity Q83310
action find
entity Q21992068
relation P703
[ANSWER]
['Q21992068', 'P703', 'Q83310']
ASK WHERE { resource:Q21992068 property:P703 resource:Q83310 }
Yes
action is_in
entity Mus musculus
action find
entity Zinc finger protein 276
relation found in taxon
['Zinc finger protein 276', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Zinc_finger_protein_276 property:found_in_taxon resource:Mus_musculus }
[]