Simple Question (Direct)
Simple Question
Q23480212
P702
Q863908
USER
What encodes UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147 ?
(Q23480212,P702,c(Q863908))
action filter_type
action find
entity Q23480212
relation P702
type Q863908
['Q23480212', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q863908 . resource:Q23480212 property:P702 ?q }
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
action filter_type
action find
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation encoded by
type nucleic acid sequence
['UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:nucleic_acid_sequence . resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 property:encoded_by ?q }
[]
nucleic acid sequence
Q23176860
SYSTEM
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
Q23176860
(Q23480212,P702,c(Q863908))
action filter_type
action find
entity Q23480212
relation P702
type Q863908
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC 01147 encodes UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC_01147
['Q23480212', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q863908 . resource:Q23480212 property:P702 ?q }
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC 01147 encodes UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC_01147
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
action filter_type
action find
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation encoded by
type nucleic acid sequence
['UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:nucleic_acid_sequence . resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 property:encoded_by ?q }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23480212
P681
Q15989253
USER
Which is the part that is a component of UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147 ?
(Q23480212,P681,c(Q15989253))
action filter_type
action find
entity Q23480212
relation P681
type Q15989253
['Q23480212', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:Q15989253 . resource:Q23480212 property:P681 ?n }
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
action filter_type
action find
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation cell component
type part
['UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:part . resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 property:cell_component ?n }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23480212,P681,c(Q15989253))
action filter_type
action find
entity Q23480212
relation P681
type Q15989253
[ANSWER] is the part that is a component of UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC_01147
['Q23480212', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:Q15989253 . resource:Q23480212 property:P681 ?n }
cytoplasm
Cytoplasm is the part that is a component of UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC_01147
cytoplasm
action filter_type
action find
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation cell component
type part
['UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { ?n rdf:type ontology:part . resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 property:cell_component ?n }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23480212
P688
Q863908
USER
Which nucleic acid sequence encodes UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147 ?
(c(Q863908),P688,Q23480212)
action filter_type
action find_reverse
entity Q23480212
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23480212']
SELECT DISTINCT ?x WHERE { ?x property:P688 resource:Q23480212 . ?x rdf:type ontology:Q863908 }
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
action filter_type
action find_reverse
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147']
SELECT DISTINCT ?x WHERE { ?x property:encodes resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 . ?x rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23176860
SYSTEM
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
Q23176860
(c(Q863908),P688,Q23480212)
action filter_type
action find_reverse
entity Q23480212
relation P688
type Q863908
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC 01147 encodes UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC_01147
[{'concept': 'Q863908'}, 'P688', 'Q23480212']
SELECT DISTINCT ?x WHERE { ?x property:P688 resource:Q23480212 . ?x rdf:type ontology:Q863908 }
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC 01147 encodes UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC_01147
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
action filter_type
action find_reverse
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147']
SELECT DISTINCT ?x WHERE { ?x property:encodes resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 . ?x rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23480212
P703
Q631147
USER
Where is that nutrient found ?
(Q23176860,P703,c(Q631147))
action filter_type
action find
entity Q23480212
relation P703
type Q631147
['Q23176860', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?s WHERE { resource:Q23480212 property:P703 ?s . ?s rdf:type ontology:Q631147 }
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
action filter_type
action find
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation found in taxon
type infraspecific name
['UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?s WHERE { resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 property:found_in_taxon ?s . ?s rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102956
SYSTEM
Staphylococcus aureus subsp. aureus NCTC 8325
Q21102956
(Q23176860,P703,c(Q631147))
action filter_type
action find
entity Q23480212
relation P703
type Q631147
That nutrient is found in [ANSWER]
['Q23176860', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?s WHERE { resource:Q23480212 property:P703 ?s . ?s rdf:type ontology:Q631147 }
Staphylococcus aureus subsp. aureus NCTC 8325
That nutrient is found in Staphylococcus aureus subsp. aureus NCTC 8325
Staphylococcus aureus subsp. aureus NCTC 8325
action filter_type
action find
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation found in taxon
type infraspecific name
['UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?s WHERE { resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 property:found_in_taxon ?s . ?s rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23213810 Q23176860
P703
Q631147
USER
Which infraspecific names are the taxon to which UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147 or RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily    lp_1928 belongs to ?
OR((Q23176860,P703,c(Q631147)), (Q23213810,P703,c(Q631147)))
action filter_type
action union
action find
entity Q23176860
relation P703
action find
entity Q23213810
relation P703
type Q631147
{'OR': [['Q23176860', 'P703', {'concept': 'Q631147'}], ['Q23213810', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?e WHERE { { ?o property:P703 ?e . VALUES ( ?o ) { ( resource:Q23176860 ) ( resource:Q23213810 ) } } . ?e rdf:type ontology:Q631147 }
RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily    lp_1928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
action filter_type
action union
action find
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation found in taxon
action find
entity RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily    lp_1928
relation found in taxon
type infraspecific name
{'OR': [['UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147', 'found in taxon', {'concept': 'infraspecific name'}], ['RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily    lp_1928', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?e WHERE { { ?o property:found_in_taxon ?e . VALUES ( ?o ) { ( resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 ) ( resource:RNA_polymerase_(RNAP)-binding_regulatory_protein,_arsenate_reductase_(ArsC)_family,_Spx_subfamily____lp_1928 ) } } . ?e rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102956 Q21102979
SYSTEM
Staphylococcus aureus subsp. aureus NCTC 8325, Lactobacillus plantarum WCFS1
Q21102956 Q21102979
OR((Q23176860,P703,c(Q631147)), (Q23213810,P703,c(Q631147)))
action filter_type
action union
action find
entity Q23176860
relation P703
action find
entity Q23213810
relation P703
type Q631147
[ANSWERS] are the taxon to which UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC_01147 or RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily lp_1928 belongs to
{'OR': [['Q23176860', 'P703', {'concept': 'Q631147'}], ['Q23213810', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?e WHERE { { ?o property:P703 ?e . VALUES ( ?o ) { ( resource:Q23176860 ) ( resource:Q23213810 ) } } . ?e rdf:type ontology:Q631147 }
Staphylococcus aureus subsp. aureus NCTC 8325 Lactobacillus plantarum WCFS1
Staphylococcus aureus subsp. aureus NCTC 8325 and Lactobacillus plantarum WCFS1 are the taxon to which UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase SAOUHSC_01147 or RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily lp_1928 belongs to
Staphylococcus aureus subsp. aureus NCTC 8325 Lactobacillus plantarum WCFS1
action filter_type
action union
action find
entity UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147
relation found in taxon
action find
entity RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily    lp_1928
relation found in taxon
type infraspecific name
{'OR': [['UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase    SAOUHSC_01147', 'found in taxon', {'concept': 'infraspecific name'}], ['RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily    lp_1928', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?e WHERE { { ?o property:found_in_taxon ?e . VALUES ( ?o ) { ( resource:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate_synthetase____SAOUHSC_01147 ) ( resource:RNA_polymerase_(RNAP)-binding_regulatory_protein,_arsenate_reductase_(ArsC)_family,_Spx_subfamily____lp_1928 ) } } . ?e rdf:type ontology:infraspecific_name }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23236766
Q631147
USER
And also tell me about putative orotate phosphoribosyltransferase    SPy_0901?
(Q23236766,P703,c(Q631147))
action filter_type
action find
entity Q23236766
relation P703
type Q631147
['Q23236766', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q631147 . resource:Q23236766 property:P703 ?m }
putative orotate phosphoribosyltransferase    SPy_0901
action filter_type
action find
entity putative orotate phosphoribosyltransferase    SPy_0901
relation found in taxon
type infraspecific name
['putative orotate phosphoribosyltransferase    SPy_0901', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:infraspecific_name . resource:putative_orotate_phosphoribosyltransferase____SPy_0901 property:found_in_taxon ?m }
[]
infraspecific name
Q21102964
SYSTEM
Streptococcus pyogenes M1 GAS
Q21102964
(Q23236766,P703,c(Q631147))
action filter_type
action find
entity Q23236766
relation P703
type Q631147
[ANSWER]
['Q23236766', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:Q631147 . resource:Q23236766 property:P703 ?m }
Streptococcus pyogenes M1 GAS
Streptococcus pyogenes M1 GAS
action filter_type
action find
entity putative orotate phosphoribosyltransferase    SPy_0901
relation found in taxon
type infraspecific name
['putative orotate phosphoribosyltransferase    SPy_0901', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?m WHERE { ?m rdf:type ontology:infraspecific_name . resource:putative_orotate_phosphoribosyltransferase____SPy_0901 property:found_in_taxon ?m }
[]
Simple Question (Ellipsis)
Incomplete|object parent is changed, subject and predicate remain same
Q23236766
Q631147
USER
And which infraspecific name?
(Q23236766,P703,c(Q631147))
action filter_type
action find
entity Q23236766
relation P703
type Q631147
['Q23236766', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q631147 . resource:Q23236766 property:P703 ?q }
putative orotate phosphoribosyltransferase    SPy_0901
action filter_type
action find
entity putative orotate phosphoribosyltransferase    SPy_0901
relation found in taxon
type infraspecific name
['putative orotate phosphoribosyltransferase    SPy_0901', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:infraspecific_name . resource:putative_orotate_phosphoribosyltransferase____SPy_0901 property:found_in_taxon ?q }
[]
infraspecific name
Q21102964
SYSTEM
Streptococcus pyogenes M1 GAS
Q21102964
(Q23236766,P703,c(Q631147))
action filter_type
action find
entity Q23236766
relation P703
type Q631147
[ANSWER]
['Q23236766', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q631147 . resource:Q23236766 property:P703 ?q }
Streptococcus pyogenes M1 GAS
Streptococcus pyogenes M1 GAS
action filter_type
action find
entity putative orotate phosphoribosyltransferase    SPy_0901
relation found in taxon
type infraspecific name
['putative orotate phosphoribosyltransferase    SPy_0901', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:infraspecific_name . resource:putative_orotate_phosphoribosyltransferase____SPy_0901 property:found_in_taxon ?q }
[]