Simple Question (Direct)
Simple Question
Q23483239
P681
Q15989253
USER
Which is the cell component of UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768 ?
(Q23483239,P681,c(Q15989253))
action filter_type
action find
entity Q23483239
relation P681
type Q15989253
['Q23483239', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?g WHERE { resource:Q23483239 property:P681 ?g . ?g rdf:type ontology:Q15989253 }
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
action filter_type
action find
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation cell component
type part
['UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?g WHERE { resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 property:cell_component ?g . ?g rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23483239,P681,c(Q15989253))
action filter_type
action find
entity Q23483239
relation P681
type Q15989253
The [ANSWER] is the cell component of UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase DR_0768
['Q23483239', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?g WHERE { resource:Q23483239 property:P681 ?g . ?g rdf:type ontology:Q15989253 }
cytoplasm
The cytoplasm is the cell component of UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase DR_0768
cytoplasm
action filter_type
action find
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation cell component
type part
['UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?g WHERE { resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 property:cell_component ?g . ?g rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23483239
P682
Q2996394
USER
What is the biological process that UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768 is involved in ?
(Q23483239,P682,c(Q2996394))
action filter_type
action find
entity Q23483239
relation P682
type Q2996394
['Q23483239', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?q WHERE { resource:Q23483239 property:P682 ?q . ?q rdf:type ontology:Q2996394 }
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
action filter_type
action find
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation biological process
type biological process
['UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?q WHERE { resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 property:biological_process ?q . ?q rdf:type ontology:biological_process }
[]
biological process
Q14914008
SYSTEM
biosynthetic process
Q14914008
(Q23483239,P682,c(Q2996394))
action filter_type
action find
entity Q23483239
relation P682
type Q2996394
The biological process that UDP-N-acetylmuramoylalanyl -D -glutamyl-2,6-diaminopimelate--D -alanyl-D-alanyl ligase DR_0768 is involved in is a [ANSWER]
['Q23483239', 'P682', {'concept': 'Q2996394'}]
SELECT DISTINCT ?q WHERE { resource:Q23483239 property:P682 ?q . ?q rdf:type ontology:Q2996394 }
biosynthetic process
The biological process that UDP-N-acetylmuramoylalanyl -D -glutamyl-2,6-diaminopimelate--D -alanyl-D-alanyl ligase DR_0768 is involved in is a biosynthetic process
biosynthetic process
action filter_type
action find
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation biological process
type biological process
['UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768', 'biological process', {'concept': 'biological process'}]
SELECT DISTINCT ?q WHERE { resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 property:biological_process ?q . ?q rdf:type ontology:biological_process }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23483239 Q183011
P688
Q863908
USER
How many nucleic acid sequences encodes UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768 or vasopressin ?
(c(Q863908),P688,Q23483239) (c(Q863908),P688,Q183011)
action count
action union
action filter_type
action find_reverse
entity Q23483239
relation P688
type Q863908
action filter_type
action find_reverse
entity Q183011
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23483239'] [{'concept': 'Q863908'}, 'P688', 'Q183011']
SELECT DISTINCT ( COUNT ( ?h ) AS ?k ) WHERE { ?h property:P688 ?a . VALUES ( ?a ) { ( resource:Q23483239 ) ( resource:Q183011 ) } }
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768 vasopressin
action count
action union
action filter_type
action find_reverse
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity vasopressin
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'vasopressin']
SELECT DISTINCT ( COUNT ( ?h ) AS ?k ) WHERE { ?h property:encodes ?a . VALUES ( ?a ) { ( resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 ) ( resource:vasopressin ) } }
[]
nucleic acid sequence
SYSTEM
2
Q14820686 Q23183119
(c(Q863908),P688,Q23483239) (c(Q863908),P688,Q183011)
action count
action union
action filter_type
action find_reverse
entity Q23483239
relation P688
type Q863908
action filter_type
action find_reverse
entity Q183011
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q23483239'] [{'concept': 'Q863908'}, 'P688', 'Q183011']
SELECT DISTINCT ( COUNT ( ?h ) AS ?k ) WHERE { ?h property:P688 ?a . VALUES ( ?a ) { ( resource:Q23483239 ) ( resource:Q183011 ) } }
AVP UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
2
action count
action union
action filter_type
action find_reverse
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity vasopressin
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'vasopressin']
SELECT DISTINCT ( COUNT ( ?h ) AS ?k ) WHERE { ?h property:encodes ?a . VALUES ( ?a ) { ( resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 ) ( resource:vasopressin ) } }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P180
Q15989253 Q3516658 Q17335294
USER
How many parts are expressed in atmost 18 heraldic symbols and coats of arms ?
(c(Q3516658)|c(Q17335294),P180,c(Q15989253))
action count
action atmost
action union
action find_reverse_tuple_counts
relation P180
type Q15989253
type Q3516658
action find_reverse_tuple_counts
relation P180
type Q15989253
type Q17335294
value 18
[[{'concept': 'Q3516658'}, {'concept': 'Q17335294'}], 'P180', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?r ) WHERE { { SELECT DISTINCT ( COUNT ( ?n ) AS ?w ) ?f WHERE { VALUES ( ?b ) { ( ontology:Q17335294 ) ( ontology:Q3516658 ) } . ?n rdf:type ?b } GROUP BY ?f } . FILTER ( ?w <= 18 ) }
action count
action atmost
action union
action find_reverse_tuple_counts
relation depicts
type part
type heraldic symbol
action find_reverse_tuple_counts
relation depicts
type part
type flag or coat of arms
value 18
[[{'concept': 'heraldic symbol'}, {'concept': 'flag or coat of arms'}], 'depicts', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?r ) WHERE { { SELECT DISTINCT ( COUNT ( ?n ) AS ?w ) ?f WHERE { VALUES ( ?b ) { ( ontology:flag_or_coat_of_arms ) ( ontology:heraldic_symbol ) } . ?n rdf:type ?b } GROUP BY ?f } . FILTER ( ?w <= 18 ) }
[]
part heraldic symbol flag or coat of arms
SYSTEM
31
Q129757 Q168002 Q392573 Q852590 Q168432 Q37017 Q172563 Q201851 Q25999 Q209760 Q15807 Q221712 Q276572 Q910873 Q18646082 Q301897 Q251238 Q1510738 Q331357 Q2192288 Q204948 Q42586 Q901207 Q42165 Q217605 Q492663 Q942890 Q712378 Q4814120 Q305026 Q668732
(c(Q3516658)|c(Q17335294),P180,c(Q15989253))
action count
action atmost
action union
action find_reverse_tuple_counts
relation P180
type Q15989253
type Q3516658
action find_reverse_tuple_counts
relation P180
type Q15989253
type Q17335294
value 18
[ANSWER]
[[{'concept': 'Q3516658'}, {'concept': 'Q17335294'}], 'P180', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?r ) WHERE { { SELECT DISTINCT ( COUNT ( ?n ) AS ?w ) ?f WHERE { VALUES ( ?b ) { ( ontology:Q17335294 ) ( ontology:Q3516658 ) } . ?n rdf:type ?b } GROUP BY ?f } . FILTER ( ?w <= 18 ) }
thigh ankle Organ console spire anchor face umbilical cord spine sail rudder foot sound hole Insect wing helmet thought bubble bow compartment organ pipe escutcheon vulva bow elbow musical keyboard buttocks claw Jesus and the woman taken in adultery rigging organ prow bicycle pedal crest
31
action count
action atmost
action union
action find_reverse_tuple_counts
relation depicts
type part
type heraldic symbol
action find_reverse_tuple_counts
relation depicts
type part
type flag or coat of arms
value 18
[[{'concept': 'heraldic symbol'}, {'concept': 'flag or coat of arms'}], 'depicts', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?f ) AS ?r ) WHERE { { SELECT DISTINCT ( COUNT ( ?n ) AS ?w ) ?f WHERE { VALUES ( ?b ) { ( ontology:flag_or_coat_of_arms ) ( ontology:heraldic_symbol ) } . ?n rdf:type ?b } GROUP BY ?f } . FILTER ( ?w <= 18 ) }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23483239
P702
Q863908
USER
What is the gene that encodes UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768 ?
(Q23483239,P702,c(Q863908))
action filter_type
action find
entity Q23483239
relation P702
type Q863908
['Q23483239', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?o WHERE { resource:Q23483239 property:P702 ?o . ?o rdf:type ontology:Q863908 }
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
action filter_type
action find
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation encoded by
type nucleic acid sequence
['UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?o WHERE { resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 property:encoded_by ?o . ?o rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23183119
SYSTEM
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
Q23183119
(Q23483239,P702,c(Q863908))
action filter_type
action find
entity Q23483239
relation P702
type Q863908
The gene that encodes UDP-N-acetylmuramoylalanyl -D -glutamyl-2,6-diaminopimelate--D -alanyl-D-alanyl ligase DR_0768 is also UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase DR 0768
['Q23483239', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?o WHERE { resource:Q23483239 property:P702 ?o . ?o rdf:type ontology:Q863908 }
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
The gene that encodes UDP-N-acetylmuramoylalanyl -D -glutamyl-2,6-diaminopimelate--D -alanyl-D-alanyl ligase DR_0768 is also UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase DR 0768
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
action filter_type
action find
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation encoded by
type nucleic acid sequence
['UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?o WHERE { resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 property:encoded_by ?o . ?o rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23483239
P703
Q631147
USER
What is the taxon to which UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768 belongs to ?
(Q23483239,P703,c(Q631147))
action filter_type
action find
entity Q23483239
relation P703
type Q631147
['Q23483239', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q631147 . resource:Q23483239 property:P703 ?q }
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
action filter_type
action find
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation found in taxon
type infraspecific name
['UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:infraspecific_name . resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 property:found_in_taxon ?q }
[]
infraspecific name
Q21102959
SYSTEM
Deinococcus radiodurans R1
Q21102959
(Q23483239,P703,c(Q631147))
action filter_type
action find
entity Q23483239
relation P703
type Q631147
[ANSWER]
['Q23483239', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:Q631147 . resource:Q23483239 property:P703 ?q }
Deinococcus radiodurans R1
Deinococcus radiodurans R1
Deinococcus radiodurans R1
action filter_type
action find
entity UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768
relation found in taxon
type infraspecific name
['UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase    DR_0768', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?q WHERE { ?q rdf:type ontology:infraspecific_name . resource:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl_ligase____DR_0768 property:found_in_taxon ?q }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23437923
Q631147
USER
And also tell me about cyclopropane fatty acyl phospholipid synthase    VF_A0760?
(Q23437923,P703,c(Q631147))
action filter_type
action find
entity Q23437923
relation P703
type Q631147
['Q23437923', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?f WHERE { resource:Q23437923 property:P703 ?f . ?f rdf:type ontology:Q631147 }
cyclopropane fatty acyl phospholipid synthase    VF_A0760
action filter_type
action find
entity cyclopropane fatty acyl phospholipid synthase    VF_A0760
relation found in taxon
type infraspecific name
['cyclopropane fatty acyl phospholipid synthase    VF_A0760', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?f WHERE { resource:cyclopropane_fatty_acyl_phospholipid_synthase____VF_A0760 property:found_in_taxon ?f . ?f rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102946
SYSTEM
Vibrio fischeri ES114
Q21102946
(Q23437923,P703,c(Q631147))
action filter_type
action find
entity Q23437923
relation P703
type Q631147
[ANSWER]
['Q23437923', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?f WHERE { resource:Q23437923 property:P703 ?f . ?f rdf:type ontology:Q631147 }
Vibrio fischeri ES114
Vibrio fischeri ES114
action filter_type
action find
entity cyclopropane fatty acyl phospholipid synthase    VF_A0760
relation found in taxon
type infraspecific name
['cyclopropane fatty acyl phospholipid synthase    VF_A0760', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?f WHERE { resource:cyclopropane_fatty_acyl_phospholipid_synthase____VF_A0760 property:found_in_taxon ?f . ?f rdf:type ontology:infraspecific_name }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q21102946 Q22990596
P703
Q181394
USER
Is hypothetical protein    PA3270 found in the taxon that infraspecific name ?
(Q22990596,P703,Q21102946)
action is_in
entity Q22990596
action find
entity Q21102946
relation P703
['Q22990596', 'P703', 'Q21102946']
ASK WHERE { resource:Q21102946 property:P703 resource:Q22990596 }
Vibrio fischeri ES114 hypothetical protein    PA3270
action is_in
entity hypothetical protein    PA3270
action find
entity Vibrio fischeri ES114
relation found in taxon
['hypothetical protein    PA3270', 'found in taxon', 'Vibrio fischeri ES114']
ASK WHERE { resource:Vibrio_fischeri_ES114 property:found_in_taxon resource:hypothetical_protein____PA3270 }
[]
nutrient
SYSTEM
NO
(Q22990596,P703,Q21102946)
action is_in
entity Q22990596
action find
entity Q21102946
relation P703
[ANSWER]
['Q22990596', 'P703', 'Q21102946']
ASK WHERE { resource:Q21102946 property:P703 resource:Q22990596 }
No
action is_in
entity hypothetical protein    PA3270
action find
entity Vibrio fischeri ES114
relation found in taxon
['hypothetical protein    PA3270', 'found in taxon', 'Vibrio fischeri ES114']
ASK WHERE { resource:Vibrio_fischeri_ES114 property:found_in_taxon resource:hypothetical_protein____PA3270 }
[]