Simple Question (Direct)
Simple Question
Q23494978
P682
Q1057
USER
Which metabolic process is maltodextrin phosphorylase    spr1916 involved in ?
(Q23494978,P682,c(Q1057))
action filter_type
action find
entity Q23494978
relation P682
type Q1057
['Q23494978', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?k WHERE { resource:Q23494978 property:P682 ?k . ?k rdf:type ontology:Q1057 }
maltodextrin phosphorylase    spr1916
action filter_type
action find
entity maltodextrin phosphorylase    spr1916
relation biological process
type metabolic process
['maltodextrin phosphorylase    spr1916', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?k WHERE { resource:maltodextrin_phosphorylase____spr1916 property:biological_process ?k . ?k rdf:type ontology:metabolic_process }
[]
metabolic process
Q14762260
SYSTEM
carbohydrate metabolic process
Q14762260
(Q23494978,P682,c(Q1057))
action filter_type
action find
entity Q23494978
relation P682
type Q1057
[ANSWER] is maltodextrin phosphorylase spr1916 involved in
['Q23494978', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ?k WHERE { resource:Q23494978 property:P682 ?k . ?k rdf:type ontology:Q1057 }
carbohydrate metabolic process
Carbohydrate metabolic process is maltodextrin phosphorylase spr1916 involved in
carbohydrate metabolic process
action filter_type
action find
entity maltodextrin phosphorylase    spr1916
relation biological process
type metabolic process
['maltodextrin phosphorylase    spr1916', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ?k WHERE { resource:maltodextrin_phosphorylase____spr1916 property:biological_process ?k . ?k rdf:type ontology:metabolic_process }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23494978
P681
Q15989253
USER
Which part is a component of maltodextrin phosphorylase    spr1916 ?
(Q23494978,P681,c(Q15989253))
action filter_type
action find
entity Q23494978
relation P681
type Q15989253
['Q23494978', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?v WHERE { resource:Q23494978 property:P681 ?v . ?v rdf:type ontology:Q15989253 }
maltodextrin phosphorylase    spr1916
action filter_type
action find
entity maltodextrin phosphorylase    spr1916
relation cell component
type part
['maltodextrin phosphorylase    spr1916', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?v WHERE { resource:maltodextrin_phosphorylase____spr1916 property:cell_component ?v . ?v rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23494978,P681,c(Q15989253))
action filter_type
action find
entity Q23494978
relation P681
type Q15989253
[ANSWER] is a component of maltodextrin phosphorylase spr1916
['Q23494978', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?v WHERE { resource:Q23494978 property:P681 ?v . ?v rdf:type ontology:Q15989253 }
cytoplasm
Cytoplasm is a component of maltodextrin phosphorylase spr1916
cytoplasm
action filter_type
action find
entity maltodextrin phosphorylase    spr1916
relation cell component
type part
['maltodextrin phosphorylase    spr1916', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?v WHERE { resource:maltodextrin_phosphorylase____spr1916 property:cell_component ?v . ?v rdf:type ontology:part }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23493272
Q15989253
USER
And what about ribosomal biogenesis GTPase    SAG1013?
(Q23493272,P681,c(Q15989253))
action filter_type
action find
entity Q23493272
relation P681
type Q15989253
['Q23493272', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?j WHERE { resource:Q23493272 property:P681 ?j . ?j rdf:type ontology:Q15989253 }
ribosomal biogenesis GTPase    SAG1013
action filter_type
action find
entity ribosomal biogenesis GTPase    SAG1013
relation cell component
type part
['ribosomal biogenesis GTPase    SAG1013', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?j WHERE { resource:ribosomal_biogenesis_GTPase____SAG1013 property:cell_component ?j . ?j rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q23493272,P681,c(Q15989253))
action filter_type
action find
entity Q23493272
relation P681
type Q15989253
[ANSWER]
['Q23493272', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?j WHERE { resource:Q23493272 property:P681 ?j . ?j rdf:type ontology:Q15989253 }
cytoplasm
cytoplasm
action filter_type
action find
entity ribosomal biogenesis GTPase    SAG1013
relation cell component
type part
['ribosomal biogenesis GTPase    SAG1013', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?j WHERE { resource:ribosomal_biogenesis_GTPase____SAG1013 property:cell_component ?j . ?j rdf:type ontology:part }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q79899 Q21207927
P681
Q181394
USER
Does Gamma-taxilin have that part as cell component ?
(Q21207927,P681,Q79899)
action is_in
entity Q79899
action find
entity Q21207927
relation P681
['Q21207927', 'P681', 'Q79899']
ASK WHERE { resource:Q21207927 property:P681 resource:Q79899 }
cytoplasm Gamma-taxilin
action is_in
entity cytoplasm
action find
entity Gamma-taxilin
relation cell component
['Gamma-taxilin', 'cell component', 'cytoplasm']
ASK WHERE { resource:Gamma-taxilin property:cell_component resource:cytoplasm }
[]
nutrient
SYSTEM
YES
(Q21207927,P681,Q79899)
action is_in
entity Q79899
action find
entity Q21207927
relation P681
[ANSWER]
['Q21207927', 'P681', 'Q79899']
ASK WHERE { resource:Q21207927 property:P681 resource:Q79899 }
Yes
action is_in
entity cytoplasm
action find
entity Gamma-taxilin
relation cell component
['Gamma-taxilin', 'cell component', 'cytoplasm']
ASK WHERE { resource:Gamma-taxilin property:cell_component resource:cytoplasm }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q23494978 Q24606052 Q23229101
P702
Q863908
USER
Is maltodextrin phosphorylase    spr1916 encoded by GRIP1 and maltodextrin phosphorylase    spr1916 ?
(Q23494978,P702,Q24606052) (Q23494978,P702,Q23229101)
action is_in
entity Q23494978
action intersection
action find_reverse
entity Q24606052
relation P702
action find_reverse
entity Q23229101
relation P702
['Q23494978', 'P702', 'Q24606052'] ['Q23494978', 'P702', 'Q23229101']
ASK WHERE { resource:Q23494978 property:P702 resource:Q24606052 . resource:Q23494978 property:P702 resource:Q23229101 }
maltodextrin phosphorylase    spr1916 GRIP1 maltodextrin phosphorylase    spr1916
action is_in
entity maltodextrin phosphorylase    spr1916
action intersection
action find_reverse
entity GRIP1
relation encoded by
action find_reverse
entity maltodextrin phosphorylase    spr1916
relation encoded by
['maltodextrin phosphorylase    spr1916', 'encoded by', 'GRIP1'] ['maltodextrin phosphorylase    spr1916', 'encoded by', 'maltodextrin phosphorylase    spr1916']
ASK WHERE { resource:maltodextrin_phosphorylase____spr1916 property:encoded_by resource:GRIP1 . resource:maltodextrin_phosphorylase____spr1916 property:encoded_by resource:maltodextrin_phosphorylase____spr1916 }
[]
nucleic acid sequence
SYSTEM
NO and YES respectively
(Q23494978,P702,Q24606052) (Q23494978,P702,Q23229101)
action is_in
entity Q23494978
action intersection
action find_reverse
entity Q24606052
relation P702
action find_reverse
entity Q23229101
relation P702
[ANSWER]
['Q23494978', 'P702', 'Q24606052'] ['Q23494978', 'P702', 'Q23229101']
ASK WHERE { resource:Q23494978 property:P702 resource:Q24606052 . resource:Q23494978 property:P702 resource:Q23229101 }
NO and YES respectively
action is_in
entity maltodextrin phosphorylase    spr1916
action intersection
action find_reverse
entity GRIP1
relation encoded by
action find_reverse
entity maltodextrin phosphorylase    spr1916
relation encoded by
['maltodextrin phosphorylase    spr1916', 'encoded by', 'GRIP1'] ['maltodextrin phosphorylase    spr1916', 'encoded by', 'maltodextrin phosphorylase    spr1916']
ASK WHERE { resource:maltodextrin_phosphorylase____spr1916 property:encoded_by resource:GRIP1 . resource:maltodextrin_phosphorylase____spr1916 property:encoded_by resource:maltodextrin_phosphorylase____spr1916 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23494978
P688
Q863908
USER
Which nucleic acid sequence encodes maltodextrin phosphorylase    spr1916 ?
(c(Q863908),P688,Q23494978)
action filter_type
action find_reverse
entity Q23494978
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23494978']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q23494978 . ?p rdf:type ontology:Q863908 }
maltodextrin phosphorylase    spr1916
action filter_type
action find_reverse
entity maltodextrin phosphorylase    spr1916
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'maltodextrin phosphorylase    spr1916']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:maltodextrin_phosphorylase____spr1916 . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23229101
SYSTEM
maltodextrin phosphorylase    spr1916
Q23229101
(c(Q863908),P688,Q23494978)
action filter_type
action find_reverse
entity Q23494978
relation P688
type Q863908
Maltodextrin phosphorylase spr1916 encodes maltodextrin phosphorylase spr1916
[{'concept': 'Q863908'}, 'P688', 'Q23494978']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q23494978 . ?p rdf:type ontology:Q863908 }
maltodextrin phosphorylase    spr1916
Maltodextrin phosphorylase spr1916 encodes maltodextrin phosphorylase spr1916
maltodextrin phosphorylase    spr1916
action filter_type
action find_reverse
entity maltodextrin phosphorylase    spr1916
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'maltodextrin phosphorylase    spr1916']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:maltodextrin_phosphorylase____spr1916 . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23494978
P703
Q631147
USER
Which taxon does maltodextrin phosphorylase    spr1916 belong to ?
(Q23494978,P703,c(Q631147))
action filter_type
action find
entity Q23494978
relation P703
type Q631147
['Q23494978', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?h WHERE { resource:Q23494978 property:P703 ?h . ?h rdf:type ontology:Q631147 }
maltodextrin phosphorylase    spr1916
action filter_type
action find
entity maltodextrin phosphorylase    spr1916
relation found in taxon
type infraspecific name
['maltodextrin phosphorylase    spr1916', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?h WHERE { resource:maltodextrin_phosphorylase____spr1916 property:found_in_taxon ?h . ?h rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102963
SYSTEM
Streptococcus pneumoniae R6
Q21102963
(Q23494978,P703,c(Q631147))
action filter_type
action find
entity Q23494978
relation P703
type Q631147
Maltodextrin phosphorylase spr1916 belongs to [ANSWER]
['Q23494978', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?h WHERE { resource:Q23494978 property:P703 ?h . ?h rdf:type ontology:Q631147 }
Streptococcus pneumoniae R6
Maltodextrin phosphorylase spr1916 belongs to Streptococcus pneumoniae R6
Streptococcus pneumoniae R6
action filter_type
action find
entity maltodextrin phosphorylase    spr1916
relation found in taxon
type infraspecific name
['maltodextrin phosphorylase    spr1916', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?h WHERE { resource:maltodextrin_phosphorylase____spr1916 property:found_in_taxon ?h . ?h rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P361
Q15989253 Q234460 Q5058355
USER
How many parts are around 4 texts and cellular components a component of ?
(c(Q234460)|c(Q5058355),P361,c(Q15989253))
action count
action approx
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q234460
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
value 4
[[{'concept': 'Q234460'}, {'concept': 'Q5058355'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?v ) WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?p ) ?q WHERE { VALUES ( ?w ) { ( ontology:Q234460 ) ( ontology:Q5058355 ) } . ?a rdf:type ?w } GROUP BY ?q } . FILTER ( ?p = 4 ) }
action count
action approx
action union
action find_reverse_tuple_counts
relation part of
type part
type text
action find_reverse_tuple_counts
relation part of
type part
type cellular component
value 4
[[{'concept': 'text'}, {'concept': 'cellular component'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?v ) WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?p ) ?q WHERE { VALUES ( ?w ) { ( ontology:text ) ( ontology:cellular_component ) } . ?a rdf:type ?w } GROUP BY ?q } . FILTER ( ?p = 4 ) }
[]
part text cellular component
SYSTEM
2
Q187181 Q14645596
(c(Q234460)|c(Q5058355),P361,c(Q15989253))
action count
action approx
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q234460
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
value 4
[ANSWER]
[[{'concept': 'Q234460'}, {'concept': 'Q5058355'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?v ) WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?p ) ?q WHERE { VALUES ( ?w ) { ( ontology:Q234460 ) ( ontology:Q5058355 ) } . ?a rdf:type ?w } GROUP BY ?q } . FILTER ( ?p = 4 ) }
synapse extracellular region
2
action count
action approx
action union
action find_reverse_tuple_counts
relation part of
type part
type text
action find_reverse_tuple_counts
relation part of
type part
type cellular component
value 4
[[{'concept': 'text'}, {'concept': 'cellular component'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?q ) AS ?v ) WHERE { { SELECT DISTINCT ( COUNT ( ?a ) AS ?p ) ?q WHERE { VALUES ( ?w ) { ( ontology:text ) ( ontology:cellular_component ) } . ?a rdf:type ?w } GROUP BY ?q } . FILTER ( ?p = 4 ) }
[]