Simple Question (Direct)
Simple Question
Q27739860
P680
Q44424
USER
Which chemical bonds represent molecular function of phosphoenolpyruvate carboxykinase    ML2624 ?
(Q27739860,P680,c(Q44424))
action filter_type
action find
entity Q27739860
relation P680
type Q44424
['Q27739860', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:Q44424 . resource:Q27739860 property:P680 ?z }
phosphoenolpyruvate carboxykinase    ML2624
action filter_type
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation molecular function
type chemical bond
['phosphoenolpyruvate carboxykinase    ML2624', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:chemical_bond . resource:phosphoenolpyruvate_carboxykinase____ML2624 property:molecular_function ?z }
[]
chemical bond
Q13667380 Q14873986
SYSTEM
metal ion binding, manganese ion binding
Q13667380 Q14873986
(Q27739860,P680,c(Q44424))
action filter_type
action find
entity Q27739860
relation P680
type Q44424
[ANSWERS] represent molecular function of phosphoenolpyruvate carboxykinase ML2624
['Q27739860', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:Q44424 . resource:Q27739860 property:P680 ?z }
metal ion binding manganese ion binding
Metal ion binding and manganese ion binding represent molecular function of phosphoenolpyruvate carboxykinase ML2624
metal ion binding manganese ion binding
action filter_type
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation molecular function
type chemical bond
['phosphoenolpyruvate carboxykinase    ML2624', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?z WHERE { ?z rdf:type ontology:chemical_bond . resource:phosphoenolpyruvate_carboxykinase____ML2624 property:molecular_function ?z }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27739860
P681
Q15989253
USER
What is a component of phosphoenolpyruvate carboxykinase    ML2624 ?
(Q27739860,P681,c(Q15989253))
action filter_type
action find
entity Q27739860
relation P681
type Q15989253
['Q27739860', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { resource:Q27739860 property:P681 ?n . ?n rdf:type ontology:Q15989253 }
phosphoenolpyruvate carboxykinase    ML2624
action filter_type
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation cell component
type part
['phosphoenolpyruvate carboxykinase    ML2624', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { resource:phosphoenolpyruvate_carboxykinase____ML2624 property:cell_component ?n . ?n rdf:type ontology:part }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q27739860,P681,c(Q15989253))
action filter_type
action find
entity Q27739860
relation P681
type Q15989253
A component of phosphoenolpyruvate carboxykinase ML2624 is a [ANSWER]
['Q27739860', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?n WHERE { resource:Q27739860 property:P681 ?n . ?n rdf:type ontology:Q15989253 }
cytoplasm
A component of phosphoenolpyruvate carboxykinase ML2624 is a cytoplasm
cytoplasm
action filter_type
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation cell component
type part
['phosphoenolpyruvate carboxykinase    ML2624', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?n WHERE { resource:phosphoenolpyruvate_carboxykinase____ML2624 property:cell_component ?n . ?n rdf:type ontology:part }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation|Incomplete
Q27761358 Q27739860
P681
Q15989253
USER
Or hypothetical protein    Mfl213?
OR((Q27739860,P681,c(Q15989253)), (Q27761358,P681,c(Q15989253)))
action filter_type
action union
action find
entity Q27739860
relation P681
action find
entity Q27761358
relation P681
type Q15989253
{'OR': [['Q27739860', 'P681', {'concept': 'Q15989253'}], ['Q27761358', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?r WHERE { { ?j property:P681 ?r . VALUES ( ?j ) { ( resource:Q27739860 ) ( resource:Q27761358 ) } } . ?r rdf:type ontology:Q15989253 }
hypothetical protein    Mfl213 phosphoenolpyruvate carboxykinase    ML2624
action filter_type
action union
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation cell component
action find
entity hypothetical protein    Mfl213
relation cell component
type part
{'OR': [['phosphoenolpyruvate carboxykinase    ML2624', 'cell component', {'concept': 'part'}], ['hypothetical protein    Mfl213', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?r WHERE { { ?j property:cell_component ?r . VALUES ( ?j ) { ( resource:phosphoenolpyruvate_carboxykinase____ML2624 ) ( resource:hypothetical_protein____Mfl213 ) } } . ?r rdf:type ontology:part }
[]
part
Q79899 Q14349455
SYSTEM
cytoplasm, membrane
Q79899 Q14349455
OR((Q27739860,P681,c(Q15989253)), (Q27761358,P681,c(Q15989253)))
action filter_type
action union
action find
entity Q27739860
relation P681
action find
entity Q27761358
relation P681
type Q15989253
[ANSWERS]
{'OR': [['Q27739860', 'P681', {'concept': 'Q15989253'}], ['Q27761358', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?r WHERE { { ?j property:P681 ?r . VALUES ( ?j ) { ( resource:Q27739860 ) ( resource:Q27761358 ) } } . ?r rdf:type ontology:Q15989253 }
cytoplasm membrane
cytoplasm membrane
action filter_type
action union
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation cell component
action find
entity hypothetical protein    Mfl213
relation cell component
type part
{'OR': [['phosphoenolpyruvate carboxykinase    ML2624', 'cell component', {'concept': 'part'}], ['hypothetical protein    Mfl213', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?r WHERE { { ?j property:cell_component ?r . VALUES ( ?j ) { ( resource:phosphoenolpyruvate_carboxykinase____ML2624 ) ( resource:hypothetical_protein____Mfl213 ) } } . ?r rdf:type ontology:part }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q27739860
P703
Q631147
USER
How many infraspecific names are phosphoenolpyruvate carboxykinase    ML2624 found ?
(Q27739860,P703,c(Q631147))
action count
action filter_type
action find
entity Q27739860
relation P703
type Q631147
['Q27739860', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?x ) WHERE { resource:Q27739860 property:P703 ?b . ?b rdf:type ontology:Q631147 }
phosphoenolpyruvate carboxykinase    ML2624
action count
action filter_type
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation found in taxon
type infraspecific name
['phosphoenolpyruvate carboxykinase    ML2624', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?x ) WHERE { resource:phosphoenolpyruvate_carboxykinase____ML2624 property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
infraspecific name
SYSTEM
1
Q21102985
(Q27739860,P703,c(Q631147))
action count
action filter_type
action find
entity Q27739860
relation P703
type Q631147
[ANSWER]
['Q27739860', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?x ) WHERE { resource:Q27739860 property:P703 ?b . ?b rdf:type ontology:Q631147 }
Mycobacterium leprae TN
1
action count
action filter_type
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation found in taxon
type infraspecific name
['phosphoenolpyruvate carboxykinase    ML2624', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?b ) AS ?x ) WHERE { resource:phosphoenolpyruvate_carboxykinase____ML2624 property:found_in_taxon ?b . ?b rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Incomplete count-based ques
Q27548093
Q631147
USER
And also tell me about Sgt2p YOR007C?
(Q27548093,P703,c(Q631147))
action count
action filter_type
action find
entity Q27548093
relation P703
type Q631147
['Q27548093', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?c ) AS ?v ) WHERE { resource:Q27548093 property:P703 ?c . ?c rdf:type ontology:Q631147 }
Sgt2p YOR007C
action count
action filter_type
action find
entity Sgt2p YOR007C
relation found in taxon
type infraspecific name
['Sgt2p YOR007C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?c ) AS ?v ) WHERE { resource:Sgt2p_YOR007C property:found_in_taxon ?c . ?c rdf:type ontology:infraspecific_name }
[]
infraspecific name
SYSTEM
1
(Q27548093,P703,c(Q631147))
action count
action filter_type
action find
entity Q27548093
relation P703
type Q631147
[ANSWER]
['Q27548093', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?c ) AS ?v ) WHERE { resource:Q27548093 property:P703 ?c . ?c rdf:type ontology:Q631147 }
1
action count
action filter_type
action find
entity Sgt2p YOR007C
relation found in taxon
type infraspecific name
['Sgt2p YOR007C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?c ) AS ?v ) WHERE { resource:Sgt2p_YOR007C property:found_in_taxon ?c . ?c rdf:type ontology:infraspecific_name }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q27548093 Q10899271
P688
Q863908
USER
How many nucleic acid sequences encodes Sgt2p YOR007C or Poly(ADP-ribose) glycohydrolase ?
(c(Q863908),P688,Q27548093) (c(Q863908),P688,Q10899271)
action count
action union
action filter_type
action find_reverse
entity Q27548093
relation P688
type Q863908
action filter_type
action find_reverse
entity Q10899271
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27548093'] [{'concept': 'Q863908'}, 'P688', 'Q10899271']
SELECT DISTINCT ( COUNT ( ?e ) AS ?g ) WHERE { { ?e property:P688 resource:Q27548093 . ?e rdf:type ontology:Q863908 } UNION { ?e property:P688 resource:Q10899271 . ?e rdf:type ontology:Q863908 } }
Sgt2p YOR007C Poly(ADP-ribose) glycohydrolase
action count
action union
action filter_type
action find_reverse
entity Sgt2p YOR007C
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity Poly(ADP-ribose) glycohydrolase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Sgt2p YOR007C'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Poly(ADP-ribose) glycohydrolase']
SELECT DISTINCT ( COUNT ( ?e ) AS ?g ) WHERE { { ?e property:encodes resource:Sgt2p_YOR007C . ?e rdf:type ontology:nucleic_acid_sequence } UNION { ?e property:encodes resource:Poly(ADP-ribose)_glycohydrolase . ?e rdf:type ontology:nucleic_acid_sequence } }
[]
nucleic acid sequence
SYSTEM
2
Q18255766 Q27540938
(c(Q863908),P688,Q27548093) (c(Q863908),P688,Q10899271)
action count
action union
action filter_type
action find_reverse
entity Q27548093
relation P688
type Q863908
action filter_type
action find_reverse
entity Q10899271
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q27548093'] [{'concept': 'Q863908'}, 'P688', 'Q10899271']
SELECT DISTINCT ( COUNT ( ?e ) AS ?g ) WHERE { { ?e property:P688 resource:Q27548093 . ?e rdf:type ontology:Q863908 } UNION { ?e property:P688 resource:Q10899271 . ?e rdf:type ontology:Q863908 } }
Parg Sgt2p YOR007C
2
action count
action union
action filter_type
action find_reverse
entity Sgt2p YOR007C
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity Poly(ADP-ribose) glycohydrolase
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Sgt2p YOR007C'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'Poly(ADP-ribose) glycohydrolase']
SELECT DISTINCT ( COUNT ( ?e ) AS ?g ) WHERE { { ?e property:encodes resource:Sgt2p_YOR007C . ?e rdf:type ontology:nucleic_acid_sequence } UNION { ?e property:encodes resource:Poly(ADP-ribose)_glycohydrolase . ?e rdf:type ontology:nucleic_acid_sequence } }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q23063819 Q27739860
P702
Q863908
USER
Which nucleic acid sequences encodes phosphoenolpyruvate carboxykinase    ML2624 or 30S ribosomal protein S6    LA_1675 ?
OR((Q27739860,P702,c(Q863908)), (Q23063819,P702,c(Q863908)))
action filter_type
action union
action find
entity Q27739860
relation P702
action find
entity Q23063819
relation P702
type Q863908
{'OR': [['Q27739860', 'P702', {'concept': 'Q863908'}], ['Q23063819', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?x WHERE { { { resource:Q27739860 property:P702 ?x } UNION { resource:Q23063819 property:P702 ?x } } . ?x rdf:type ontology:Q863908 }
30S ribosomal protein S6    LA_1675 phosphoenolpyruvate carboxykinase    ML2624
action filter_type
action union
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation encoded by
action find
entity 30S ribosomal protein S6    LA_1675
relation encoded by
type nucleic acid sequence
{'OR': [['phosphoenolpyruvate carboxykinase    ML2624', 'encoded by', {'concept': 'nucleic acid sequence'}], ['30S ribosomal protein S6    LA_1675', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?x WHERE { { { resource:phosphoenolpyruvate_carboxykinase____ML2624 property:encoded_by ?x } UNION { resource:30S_ribosomal_protein_S6____LA_1675 property:encoded_by ?x } } . ?x rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23262417 Q23024540
SYSTEM
phosphoenolpyruvate carboxykinase    ML2624, 30S ribosomal protein S6    LA_1675
Q23262417 Q23024540
OR((Q27739860,P702,c(Q863908)), (Q23063819,P702,c(Q863908)))
action filter_type
action union
action find
entity Q27739860
relation P702
action find
entity Q23063819
relation P702
type Q863908
[ANSWERS]
{'OR': [['Q27739860', 'P702', {'concept': 'Q863908'}], ['Q23063819', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?x WHERE { { { resource:Q27739860 property:P702 ?x } UNION { resource:Q23063819 property:P702 ?x } } . ?x rdf:type ontology:Q863908 }
phosphoenolpyruvate carboxykinase    ML2624 30S ribosomal protein S6    LA_1675
Phosphoenolpyruvate carboxykinase ML2624 and 30S ribosomal protein S6 LA 1675 encode phosphoenolpyruvate carboxykinase ML2624 or 30S ribosomal protein S6 LA_1675
phosphoenolpyruvate carboxykinase    ML2624 30S ribosomal protein S6    LA_1675
action filter_type
action union
action find
entity phosphoenolpyruvate carboxykinase    ML2624
relation encoded by
action find
entity 30S ribosomal protein S6    LA_1675
relation encoded by
type nucleic acid sequence
{'OR': [['phosphoenolpyruvate carboxykinase    ML2624', 'encoded by', {'concept': 'nucleic acid sequence'}], ['30S ribosomal protein S6    LA_1675', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?x WHERE { { { resource:phosphoenolpyruvate_carboxykinase____ML2624 property:encoded_by ?x } UNION { resource:30S_ribosomal_protein_S6____LA_1675 property:encoded_by ?x } } . ?x rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q79529 Q181394
USER
How many nutrients do around 42 chemical substances and nutrients interact with ?
(c(Q79529)|c(Q181394),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 42
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?j ) WHERE { { SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) ?o WHERE { { ?q property:P129 ?o . ?q rdf:type ontology:Q79529 . ?o rdf:type ontology:Q181394 } UNION { ?q property:P129 ?o . ?o rdf:type ontology:Q181394 . ?q rdf:type ontology:Q181394 } } GROUP BY ?o } . FILTER ( ?i = 42 ) }
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 42
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?j ) WHERE { { SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) ?o WHERE { { ?q property:physically_interacts_with ?o . ?q rdf:type ontology:chemical_substance . ?o rdf:type ontology:nutrient } UNION { ?q property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient . ?q rdf:type ontology:nutrient } } GROUP BY ?o } . FILTER ( ?i = 42 ) }
[]
nutrient chemical substance nutrient
SYSTEM
4
Q4639596 Q21108118 Q21115043 Q1949517
(c(Q79529)|c(Q181394),P129,c(Q181394))
action count
action approx
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 42
[ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?j ) WHERE { { SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) ?o WHERE { { ?q property:P129 ?o . ?q rdf:type ontology:Q79529 . ?o rdf:type ontology:Q181394 } UNION { ?q property:P129 ?o . ?o rdf:type ontology:Q181394 . ?q rdf:type ontology:Q181394 } } GROUP BY ?o } . FILTER ( ?i = 42 ) }
5-hydroxytryptamine receptor 2B 5-hydroxytryptamine receptor 2C 5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A
4
action count
action approx
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 42
[[{'concept': 'chemical substance'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?o ) AS ?j ) WHERE { { SELECT DISTINCT ( COUNT ( ?q ) AS ?i ) ?o WHERE { { ?q property:physically_interacts_with ?o . ?q rdf:type ontology:chemical_substance . ?o rdf:type ontology:nutrient } UNION { ?q property:physically_interacts_with ?o . ?o rdf:type ontology:nutrient . ?q rdf:type ontology:nutrient } } GROUP BY ?o } . FILTER ( ?i = 42 ) }
[]