Simple Question (Direct)
Simple Question
Q27548995
P681
Q15989253
USER
Which parts are components of palmitoyltransferase YKT6 YKL196C ?
(Q27548995,P681,c(Q15989253))
action filter_type
action find
entity Q27548995
relation P681
type Q15989253
['Q27548995', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:Q15989253 . resource:Q27548995 property:P681 ?k }
palmitoyltransferase YKT6 YKL196C
action filter_type
action find
entity palmitoyltransferase YKT6 YKL196C
relation cell component
type part
['palmitoyltransferase YKT6 YKL196C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:part . resource:palmitoyltransferase_YKT6_YKL196C property:cell_component ?k }
[]
part
Q39572 Q14349455
SYSTEM
mitochondrion, membrane
Q39572 Q14349455
(Q27548995,P681,c(Q15989253))
action filter_type
action find
entity Q27548995
relation P681
type Q15989253
The [ANSWERS] are components of palmitoyltransferase YKT6 YKL196C
['Q27548995', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:Q15989253 . resource:Q27548995 property:P681 ?k }
mitochondrion membrane
The mitochondrion and membrane are components of palmitoyltransferase YKT6 YKL196C
mitochondrion membrane
action filter_type
action find
entity palmitoyltransferase YKT6 YKL196C
relation cell component
type part
['palmitoyltransferase YKT6 YKL196C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?k WHERE { ?k rdf:type ontology:part . resource:palmitoyltransferase_YKT6_YKL196C property:cell_component ?k }
[]
Clarification
Simple Question|Single Entity|Indirect
Q39572
P361
Q234460
USER
What is a component of that part ?
(c(Q234460),P361,Q39572)
action filter_type
action find_reverse
entity Q39572
relation P361
type Q234460
[{'concept': 'Q234460'}, 'P361', 'Q39572']
SELECT DISTINCT ?m WHERE { ?m property:P361 resource:Q39572 . ?m rdf:type ontology:Q234460 }
mitochondrion
action filter_type
action find_reverse
entity mitochondrion
relation part of
type text
[{'concept': 'text'}, 'part of', 'mitochondrion']
SELECT DISTINCT ?m WHERE { ?m property:part_of resource:mitochondrion . ?m rdf:type ontology:text }
[]
text
Clarification for simple ques.
Q39572
SYSTEM
Did you mean mitochondrion ?
Q39572 Q14349455
(c(Q234460),P361,Q39572) (c(Q234460),P361,Q14349455)
[ANSWER]
[{'concept': 'Q234460'}, 'P361', 'Q39572'] [{'concept': 'Q234460'}, 'P361', 'Q14349455']
SELECT DISTINCT ?m WHERE { ?m property:P361 resource:Q39572 . ?m rdf:type ontology:Q234460 }
mitochondrion membrane
Did you mean mitochondrion ?
mitochondrion
[{'concept': 'text'}, 'part of', 'mitochondrion'] [{'concept': 'text'}, 'part of', 'membrane']
SELECT DISTINCT ?m WHERE { ?m property:part_of resource:mitochondrion . ?m rdf:type ontology:text }
[]
Simple Question (Coreferenced)
USER
Yes
(c(Q234460),P361,Q39572)
[{'concept': 'Q234460'}, 'P361', 'Q39572']
[{'concept': 'text'}, 'part of', 'mitochondrion']
[]
Q7430
SYSTEM
DNA
Q7430
(c(Q234460),P361,Q39572)
action filter_type
action find_reverse
entity Q39572
relation P361
type Q234460
A component of that part is the [ANSWER]
[{'concept': 'Q234460'}, 'P361', 'Q39572']
SELECT DISTINCT ?m WHERE { ?m property:P361 resource:Q39572 . ?m rdf:type ontology:Q234460 }
DNA
A component of that part is the DNA
DNA
action filter_type
action find_reverse
entity mitochondrion
relation part of
type text
[{'concept': 'text'}, 'part of', 'mitochondrion']
SELECT DISTINCT ?m WHERE { ?m property:part_of resource:mitochondrion . ?m rdf:type ontology:text }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q7430
P921
Q2342494
USER
Which collectable is that text a main subject of ?
(c(Q2342494),P921,Q7430)
action filter_type
action find_reverse
entity Q7430
relation P921
type Q2342494
[{'concept': 'Q2342494'}, 'P921', 'Q7430']
SELECT DISTINCT ?d WHERE { ?d property:P921 resource:Q7430 . ?d rdf:type ontology:Q2342494 }
DNA
action filter_type
action find_reverse
entity DNA
relation main subject
type collectable
[{'concept': 'collectable'}, 'main subject', 'DNA']
SELECT DISTINCT ?d WHERE { ?d property:main_subject resource:DNA . ?d rdf:type ontology:collectable }
[]
collectable
Q24690566
SYSTEM
DNA repair and mutagenesis
Q24690566
(c(Q2342494),P921,Q7430)
action filter_type
action find_reverse
entity Q7430
relation P921
type Q2342494
[ANSWER] is that text a main subject of
[{'concept': 'Q2342494'}, 'P921', 'Q7430']
SELECT DISTINCT ?d WHERE { ?d property:P921 resource:Q7430 . ?d rdf:type ontology:Q2342494 }
DNA repair and mutagenesis
DNA repair and mutagenesis is that text a main subject of
DNA repair and mutagenesis
action filter_type
action find_reverse
entity DNA
relation main subject
type collectable
[{'concept': 'collectable'}, 'main subject', 'DNA']
SELECT DISTINCT ?d WHERE { ?d property:main_subject resource:DNA . ?d rdf:type ontology:collectable }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q7430
P138
Q17444909
USER
Which astronomical object type comes from that text ?
(c(Q17444909),P138,Q24690566)
action filter_type
action find_reverse
entity Q7430
relation P138
type Q17444909
[{'concept': 'Q17444909'}, 'P138', 'Q24690566']
SELECT DISTINCT ?b WHERE { ?b property:P138 resource:Q7430 . ?b rdf:type ontology:Q17444909 }
DNA
action filter_type
action find_reverse
entity DNA
relation named after
type astronomical object type
[{'concept': 'astronomical object type'}, 'named after', 'DNA repair and mutagenesis']
SELECT DISTINCT ?b WHERE { ?b property:named_after resource:DNA . ?b rdf:type ontology:astronomical_object_type }
[]
astronomical object type
Q3303800
SYSTEM
55555 DNA
Q3303800
(c(Q17444909),P138,Q24690566)
action filter_type
action find_reverse
entity Q7430
relation P138
type Q17444909
[ANSWER] comes from that text
[{'concept': 'Q17444909'}, 'P138', 'Q24690566']
SELECT DISTINCT ?b WHERE { ?b property:P138 resource:Q7430 . ?b rdf:type ontology:Q17444909 }
55555 DNA
55555 DNA comes from that text
55555 DNA
action filter_type
action find_reverse
entity DNA
relation named after
type astronomical object type
[{'concept': 'astronomical object type'}, 'named after', 'DNA repair and mutagenesis']
SELECT DISTINCT ?b WHERE { ?b property:named_after resource:DNA . ?b rdf:type ontology:astronomical_object_type }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q27547730 Q7430
P361 P681
Q15989253
USER
Which parts are DNA a part of and are the cell components of Aep2p YMR282C ?
AND((Q7430,P361,c(Q15989253)), (Q27547730,P681,c(Q15989253)))
action filter_type
action intersection
action find
entity Q7430
relation P361
action find
entity Q27547730
relation P681
type Q15989253
{'AND': [['Q7430', 'P361', {'concept': 'Q15989253'}], ['Q27547730', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?x WHERE { resource:Q27547730 property:P681 ?x . resource:Q7430 property:P361 ?x . ?x rdf:type ontology:Q15989253 }
Aep2p YMR282C DNA
action filter_type
action intersection
action find
entity DNA
relation part of
action find
entity Aep2p YMR282C
relation cell component
type part
{'AND': [['DNA', 'part of', {'concept': 'part'}], ['Aep2p YMR282C', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?x WHERE { resource:Aep2p_YMR282C property:cell_component ?x . resource:DNA property:part_of ?x . ?x rdf:type ontology:part }
[]
part
Q39572
SYSTEM
mitochondrion
Q39572
AND((Q7430,P361,c(Q15989253)), (Q27547730,P681,c(Q15989253)))
action filter_type
action intersection
action find
entity Q7430
relation P361
action find
entity Q27547730
relation P681
type Q15989253
The [ANSWER] is DNA a part of and is the cell components of Aep2p YMR282C
{'AND': [['Q7430', 'P361', {'concept': 'Q15989253'}], ['Q27547730', 'P681', {'concept': 'Q15989253'}]]}
SELECT DISTINCT ?x WHERE { resource:Q27547730 property:P681 ?x . resource:Q7430 property:P361 ?x . ?x rdf:type ontology:Q15989253 }
mitochondrion
The mitochondrion is DNA a part of and is the cell components of Aep2p YMR282C
mitochondrion
action filter_type
action intersection
action find
entity DNA
relation part of
action find
entity Aep2p YMR282C
relation cell component
type part
{'AND': [['DNA', 'part of', {'concept': 'part'}], ['Aep2p YMR282C', 'cell component', {'concept': 'part'}]]}
SELECT DISTINCT ?x WHERE { resource:Aep2p_YMR282C property:cell_component ?x . resource:DNA property:part_of ?x . ?x rdf:type ontology:part }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27547730
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q39572)
action filter_type
action find_reverse
entity Q27547730
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q39572']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q27547730 . ?p rdf:type ontology:Q863908 }
Aep2p YMR282C
action filter_type
action find_reverse
entity Aep2p YMR282C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'mitochondrion']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:Aep2p_YMR282C . ?p rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27540576
SYSTEM
Aep2p YMR282C
Q27540576
(c(Q863908),P688,Q39572)
action filter_type
action find_reverse
entity Q27547730
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q39572']
SELECT DISTINCT ?p WHERE { ?p property:P688 resource:Q27547730 . ?p rdf:type ontology:Q863908 }
Aep2p YMR282C
Aep2p YMR282C encodes that nutrient
Aep2p YMR282C
action filter_type
action find_reverse
entity Aep2p YMR282C
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'mitochondrion']
SELECT DISTINCT ?p WHERE { ?p property:encodes resource:Aep2p_YMR282C . ?p rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27547730
P703
Q631147
USER
Which taxon is Aep2p YMR282C a part of ?
(Q27547730,P703,c(Q631147))
action filter_type
action find
entity Q27547730
relation P703
type Q631147
['Q27547730', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?f WHERE { resource:Q27547730 property:P703 ?f . ?f rdf:type ontology:Q631147 }
Aep2p YMR282C
action filter_type
action find
entity Aep2p YMR282C
relation found in taxon
type infraspecific name
['Aep2p YMR282C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?f WHERE { resource:Aep2p_YMR282C property:found_in_taxon ?f . ?f rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27547730,P703,c(Q631147))
action filter_type
action find
entity Q27547730
relation P703
type Q631147
[ANSWER] is Aep2p YMR282C a part of
['Q27547730', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?f WHERE { resource:Q27547730 property:P703 ?f . ?f rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c is Aep2p YMR282C a part of
Saccharomyces cerevisiae S288c
action filter_type
action find
entity Aep2p YMR282C
relation found in taxon
type infraspecific name
['Aep2p YMR282C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?f WHERE { resource:Aep2p_YMR282C property:found_in_taxon ?f . ?f rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27547730
P702
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(Q27510868,P702,c(Q863908))
action filter_type
action find
entity Q27547730
relation P702
type Q863908
['Q27510868', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?s WHERE { resource:Q27547730 property:P702 ?s . ?s rdf:type ontology:Q863908 }
Aep2p YMR282C
action filter_type
action find
entity Aep2p YMR282C
relation encoded by
type nucleic acid sequence
['Saccharomyces cerevisiae S288c', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?s WHERE { resource:Aep2p_YMR282C property:encoded_by ?s . ?s rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q27540576
SYSTEM
Aep2p YMR282C
Q27540576
(Q27510868,P702,c(Q863908))
action filter_type
action find
entity Q27547730
relation P702
type Q863908
[ANSWER] encodes that nutrient
['Q27510868', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?s WHERE { resource:Q27547730 property:P702 ?s . ?s rdf:type ontology:Q863908 }
Aep2p YMR282C
Aep2p YMR282C encodes that nutrient
Aep2p YMR282C
action filter_type
action find
entity Aep2p YMR282C
relation encoded by
type nucleic acid sequence
['Saccharomyces cerevisiae S288c', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?s WHERE { resource:Aep2p_YMR282C property:encoded_by ?s . ?s rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q27540576 Q27510868
P703
Q631147
USER
Is Saccharomyces cerevisiae S288c Aep2p YMR282C found ?
(Q27540576,P703,Q27510868)
action is_in
entity Q27510868
action find
entity Q27540576
relation P703
['Q27540576', 'P703', 'Q27510868']
ASK WHERE { resource:Q27540576 property:P703 resource:Q27510868 }
Aep2p YMR282C Saccharomyces cerevisiae S288c
action is_in
entity Saccharomyces cerevisiae S288c
action find
entity Aep2p YMR282C
relation found in taxon
['Aep2p YMR282C', 'found in taxon', 'Saccharomyces cerevisiae S288c']
ASK WHERE { resource:Aep2p_YMR282C property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c }
[]
infraspecific name
SYSTEM
YES
(Q27540576,P703,Q27510868)
action is_in
entity Q27510868
action find
entity Q27540576
relation P703
[ANSWER]
['Q27540576', 'P703', 'Q27510868']
ASK WHERE { resource:Q27540576 property:P703 resource:Q27510868 }
Yes
action is_in
entity Saccharomyces cerevisiae S288c
action find
entity Aep2p YMR282C
relation found in taxon
['Aep2p YMR282C', 'found in taxon', 'Saccharomyces cerevisiae S288c']
ASK WHERE { resource:Aep2p_YMR282C property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c }
[]