Simple Question (Direct)
Simple Question
Q21124957
P703
Q16521
USER
Which taxon is Protein phosphatase 1L found in ?
(Q21124957,P703,c(Q16521))
action filter_type
action find
entity Q21124957
relation P703
type Q16521
['Q21124957', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?z WHERE { resource:Q21124957 property:P703 ?z . ?z rdf:type ontology:Q16521 }
Protein phosphatase 1L
action filter_type
action find
entity Protein phosphatase 1L
relation found in taxon
type taxon
['Protein phosphatase 1L', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?z WHERE { resource:Protein_phosphatase_1L property:found_in_taxon ?z . ?z rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q21124957,P703,c(Q16521))
action filter_type
action find
entity Q21124957
relation P703
type Q16521
Which taxon is Protein phosphatase 1L found in
['Q21124957', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?z WHERE { resource:Q21124957 property:P703 ?z . ?z rdf:type ontology:Q16521 }
Homo sapiens
Which taxon is Protein phosphatase 1L found in
Homo sapiens
action filter_type
action find
entity Protein phosphatase 1L
relation found in taxon
type taxon
['Protein phosphatase 1L', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?z WHERE { resource:Protein_phosphatase_1L property:found_in_taxon ?z . ?z rdf:type ontology:taxon }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21124957
P688
Q863908
USER
Which nucleic acid sequence encodes Protein phosphatase 1L ?
(c(Q863908),P688,Q21124957)
action filter_type
action find_reverse
entity Q21124957
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21124957']
SELECT DISTINCT ?r WHERE { ?r property:P688 resource:Q21124957 . ?r rdf:type ontology:Q863908 }
Protein phosphatase 1L
action filter_type
action find_reverse
entity Protein phosphatase 1L
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Protein phosphatase 1L']
SELECT DISTINCT ?r WHERE { ?r property:encodes resource:Protein_phosphatase_1L . ?r rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18052047
SYSTEM
PPM1L
Q18052047
(c(Q863908),P688,Q21124957)
action filter_type
action find_reverse
entity Q21124957
relation P688
type Q863908
[ANSWER] encodes Protein phosphatase 1L
[{'concept': 'Q863908'}, 'P688', 'Q21124957']
SELECT DISTINCT ?r WHERE { ?r property:P688 resource:Q21124957 . ?r rdf:type ontology:Q863908 }
PPM1L
PPM1L encodes Protein phosphatase 1L
PPM1L
action filter_type
action find_reverse
entity Protein phosphatase 1L
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Protein phosphatase 1L']
SELECT DISTINCT ?r WHERE { ?r property:encodes resource:Protein_phosphatase_1L . ?r rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18052047
P2293
Q2057971
USER
Which health problem is genetically linked with that nucleic acid sequence ?
(c(Q2057971),P2293,Q18052047)
action filter_type
action find
entity Q18052047
relation P2293
type Q2057971
[{'concept': 'Q2057971'}, 'P2293', 'Q18052047']
SELECT DISTINCT ?u WHERE { resource:Q18052047 property:P2293 ?u . ?u rdf:type ontology:Q2057971 }
PPM1L
action filter_type
action find
entity PPM1L
relation genetic association
type health problem
[{'concept': 'health problem'}, 'genetic association', 'PPM1L']
SELECT DISTINCT ?u WHERE { resource:PPM1L property:genetic_association ?u . ?u rdf:type ontology:health_problem }
[]
health problem
Q265936
SYSTEM
Kawasaki disease
Q265936
(c(Q2057971),P2293,Q18052047)
action filter_type
action find
entity Q18052047
relation P2293
type Q2057971
In [ANSWER] is genetically linked with that nucleic acid sequence
[{'concept': 'Q2057971'}, 'P2293', 'Q18052047']
SELECT DISTINCT ?u WHERE { resource:Q18052047 property:P2293 ?u . ?u rdf:type ontology:Q2057971 }
Kawasaki disease
In Kawasaki disease is genetically linked with that nucleic acid sequence
Kawasaki disease
action filter_type
action find
entity PPM1L
relation genetic association
type health problem
[{'concept': 'health problem'}, 'genetic association', 'PPM1L']
SELECT DISTINCT ?u WHERE { resource:PPM1L property:genetic_association ?u . ?u rdf:type ontology:health_problem }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18052047
P702
Q181394
USER
What is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q265936)
action filter_type
action find_reverse
entity Q18052047
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q265936']
SELECT DISTINCT ?t WHERE { ?t property:P702 resource:Q18052047 . ?t rdf:type ontology:Q181394 }
PPM1L
action filter_type
action find_reverse
entity PPM1L
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Kawasaki disease']
SELECT DISTINCT ?t WHERE { ?t property:encoded_by resource:PPM1L . ?t rdf:type ontology:nutrient }
[]
nutrient
Q21124957
SYSTEM
Protein phosphatase 1L
Q21124957
(c(Q181394),P702,Q265936)
action filter_type
action find_reverse
entity Q18052047
relation P702
type Q181394
The [ANSWER] is encoded by that nucleic acid sequence
[{'concept': 'Q181394'}, 'P702', 'Q265936']
SELECT DISTINCT ?t WHERE { ?t property:P702 resource:Q18052047 . ?t rdf:type ontology:Q181394 }
Protein phosphatase 1L
The Protein phosphatase 1L is encoded by that nucleic acid sequence
Protein phosphatase 1L
action filter_type
action find_reverse
entity PPM1L
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Kawasaki disease']
SELECT DISTINCT ?t WHERE { ?t property:encoded_by resource:PPM1L . ?t rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18052047
P684
Q863908
USER
Which nucleic acid sequence has that one as its orthologous gene ?
(c(Q863908),P684,Q21124957)
action filter_type
action find
entity Q18052047
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q21124957']
SELECT DISTINCT ?h WHERE { resource:Q18052047 property:P684 ?h . ?h rdf:type ontology:Q863908 }
PPM1L
action filter_type
action find
entity PPM1L
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Protein phosphatase 1L']
SELECT DISTINCT ?h WHERE { resource:PPM1L property:ortholog ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18299007
SYSTEM
Ppm1l
Q18299007
(c(Q863908),P684,Q21124957)
action filter_type
action find
entity Q18052047
relation P684
type Q863908
[ANSWER] has that one as its orthologous gene
[{'concept': 'Q863908'}, 'P684', 'Q21124957']
SELECT DISTINCT ?h WHERE { resource:Q18052047 property:P684 ?h . ?h rdf:type ontology:Q863908 }
Ppm1l
Ppm1l has that one as its orthologous gene
Ppm1l
action filter_type
action find
entity PPM1L
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'Protein phosphatase 1L']
SELECT DISTINCT ?h WHERE { resource:PPM1L property:ortholog ?h . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q18299007 Q23501666
P688
Q181394
USER
Is hypothetical protein    EF3295 encoded by Ppm1l ?
(Q18299007,P688,Q23501666)
action is_in
entity Q23501666
action find
entity Q18299007
relation P688
['Q18299007', 'P688', 'Q23501666']
ASK WHERE { resource:Q18299007 property:P688 resource:Q23501666 }
Ppm1l hypothetical protein    EF3295
action is_in
entity hypothetical protein    EF3295
action find
entity Ppm1l
relation encodes
['Ppm1l', 'encodes', 'hypothetical protein    EF3295']
ASK WHERE { resource:Ppm1l property:encodes resource:hypothetical_protein____EF3295 }
[]
nutrient
SYSTEM
NO
(Q18299007,P688,Q23501666)
action is_in
entity Q23501666
action find
entity Q18299007
relation P688
[ANSWER]
['Q18299007', 'P688', 'Q23501666']
ASK WHERE { resource:Q18299007 property:P688 resource:Q23501666 }
No
action is_in
entity hypothetical protein    EF3295
action find
entity Ppm1l
relation encodes
['Ppm1l', 'encodes', 'hypothetical protein    EF3295']
ASK WHERE { resource:Ppm1l property:encodes resource:hypothetical_protein____EF3295 }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q15978631 Q864016 Q20819552
P427
Q3343211
USER
Is Homo sapiens of taxonomic type binomen and Gordon, Herb. Linn. No. 1292B.2 (LINN) ?
(Q15978631,P427,Q864016) (Q15978631,P427,Q20819552)
action is_in
entity Q15978631
action intersection
action find_reverse
entity Q864016
relation P427
action find_reverse
entity Q20819552
relation P427
['Q15978631', 'P427', 'Q864016'] ['Q15978631', 'P427', 'Q20819552']
ASK WHERE { resource:Q15978631 property:P427 resource:Q864016 . resource:Q15978631 property:P427 resource:Q20819552 }
Homo sapiens binomen Gordon, Herb. Linn. No. 1292B.2 (LINN)
action is_in
entity Homo sapiens
action intersection
action find_reverse
entity binomen
relation taxonomic type
action find_reverse
entity Gordon, Herb. Linn. No. 1292B.2 (LINN)
relation taxonomic type
['Homo sapiens', 'taxonomic type', 'binomen'] ['Homo sapiens', 'taxonomic type', 'Gordon, Herb. Linn. No. 1292B.2 (LINN)']
ASK WHERE { resource:Homo_sapiens property:taxonomic_type resource:binomen . resource:Homo_sapiens property:taxonomic_type resource:Gordon,_Herb._Linn._No._1292B.2_(LINN) }
[]
zoological nomenclature
SYSTEM
NO
(Q15978631,P427,Q864016) (Q15978631,P427,Q20819552)
action is_in
entity Q15978631
action intersection
action find_reverse
entity Q864016
relation P427
action find_reverse
entity Q20819552
relation P427
[ANSWER]
['Q15978631', 'P427', 'Q864016'] ['Q15978631', 'P427', 'Q20819552']
ASK WHERE { resource:Q15978631 property:P427 resource:Q864016 . resource:Q15978631 property:P427 resource:Q20819552 }
No
action is_in
entity Homo sapiens
action intersection
action find_reverse
entity binomen
relation taxonomic type
action find_reverse
entity Gordon, Herb. Linn. No. 1292B.2 (LINN)
relation taxonomic type
['Homo sapiens', 'taxonomic type', 'binomen'] ['Homo sapiens', 'taxonomic type', 'Gordon, Herb. Linn. No. 1292B.2 (LINN)']
ASK WHERE { resource:Homo_sapiens property:taxonomic_type resource:binomen . resource:Homo_sapiens property:taxonomic_type resource:Gordon,_Herb._Linn._No._1292B.2_(LINN) }
[]
Verification (Boolean) (All)
Verification|3 entities, all direct, 2 are query entities
Q18052047 Q24146738 Q21124957
P688
Q181394
USER
Does PPM1L encode 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase    ECUMN_0690 and Protein phosphatase 1L ?
(Q18052047,P688,Q24146738) (Q18052047,P688,Q21124957)
action is_in
entity Q18052047
action intersection
action find_reverse
entity Q24146738
relation P688
action find_reverse
entity Q21124957
relation P688
['Q18052047', 'P688', 'Q24146738'] ['Q18052047', 'P688', 'Q21124957']
ASK WHERE { resource:Q18052047 property:P688 resource:Q24146738 . resource:Q18052047 property:P688 resource:Q21124957 }
PPM1L 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase    ECUMN_0690 Protein phosphatase 1L
action is_in
entity PPM1L
action intersection
action find_reverse
entity 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase    ECUMN_0690
relation encodes
action find_reverse
entity Protein phosphatase 1L
relation encodes
['PPM1L', 'encodes', '2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase    ECUMN_0690'] ['PPM1L', 'encodes', 'Protein phosphatase 1L']
ASK WHERE { resource:PPM1L property:encodes resource:2,3-dihydro-2,3-dihydroxybenzoate_dehydrogenase____ECUMN_0690 . resource:PPM1L property:encodes resource:Protein_phosphatase_1L }
[]
nutrient
SYSTEM
NO and YES respectively
(Q18052047,P688,Q24146738) (Q18052047,P688,Q21124957)
action is_in
entity Q18052047
action intersection
action find_reverse
entity Q24146738
relation P688
action find_reverse
entity Q21124957
relation P688
[ANSWER]
['Q18052047', 'P688', 'Q24146738'] ['Q18052047', 'P688', 'Q21124957']
ASK WHERE { resource:Q18052047 property:P688 resource:Q24146738 . resource:Q18052047 property:P688 resource:Q21124957 }
NO and YES respectively
action is_in
entity PPM1L
action intersection
action find_reverse
entity 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase    ECUMN_0690
relation encodes
action find_reverse
entity Protein phosphatase 1L
relation encodes
['PPM1L', 'encodes', '2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase    ECUMN_0690'] ['PPM1L', 'encodes', 'Protein phosphatase 1L']
ASK WHERE { resource:PPM1L property:encodes resource:2,3-dihydro-2,3-dihydroxybenzoate_dehydrogenase____ECUMN_0690 . resource:PPM1L property:encodes resource:Protein_phosphatase_1L }
[]