Simple Question (Direct)
Simple Question
Q409114
P703
Q16521
USER
Where is Sex-determining region Y protein found ?
(Q409114,P703,c(Q16521))
action filter_type
action find
entity Q409114
relation P703
type Q16521
['Q409114', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?d WHERE { resource:Q409114 property:P703 ?d . ?d rdf:type ontology:Q16521 }
Sex-determining region Y protein
action filter_type
action find
entity Sex-determining region Y protein
relation found in taxon
type taxon
['Sex-determining region Y protein', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?d WHERE { resource:Sex-determining_region_Y_protein property:found_in_taxon ?d . ?d rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q409114,P703,c(Q16521))
action filter_type
action find
entity Q409114
relation P703
type Q16521
Sex- determining region Y protein is found in [ANSWER]
['Q409114', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?d WHERE { resource:Q409114 property:P703 ?d . ?d rdf:type ontology:Q16521 }
Homo sapiens
Sex- determining region Y protein is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Sex-determining region Y protein
relation found in taxon
type taxon
['Sex-determining region Y protein', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?d WHERE { resource:Sex-determining_region_Y_protein property:found_in_taxon ?d . ?d rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q409114
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q15978631)
action filter_type
action find_reverse
entity Q409114
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q15978631']
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q863908 . ?x property:P688 resource:Q409114 }
Sex-determining region Y protein
action filter_type
action find_reverse
entity Sex-determining region Y protein
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Homo sapiens']
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:nucleic_acid_sequence . ?x property:encodes resource:Sex-determining_region_Y_protein }
[]
nucleic acid sequence
Q14819281
SYSTEM
SRY
Q14819281
(c(Q863908),P688,Q15978631)
action filter_type
action find_reverse
entity Q409114
relation P688
type Q863908
[ANSWER] encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q15978631']
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:Q863908 . ?x property:P688 resource:Q409114 }
SRY
SRY encodes that nutrient
SRY
action filter_type
action find_reverse
entity Sex-determining region Y protein
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Homo sapiens']
SELECT DISTINCT ?x WHERE { ?x rdf:type ontology:nucleic_acid_sequence . ?x property:encodes resource:Sex-determining_region_Y_protein }
[]
Verification (Boolean) (All)
Verification|3 entities, 2 direct, 2(direct) are query entities, subject is indirect
Q14819281 Q409114 Q24124503
P688
Q181394
USER
Does that nucleic acid sequence encodes Sex-determining region Y protein and hypothetical protein    BP2387 ?
(Q14819281,P688,Q409114) (Q14819281,P688,Q24124503)
action is_in
entity Q14819281
action intersection
action find_reverse
entity Q409114
relation P688
action find_reverse
entity Q24124503
relation P688
['Q14819281', 'P688', 'Q409114'] ['Q14819281', 'P688', 'Q24124503']
ASK WHERE { resource:Q14819281 property:P688 resource:Q409114 . resource:Q14819281 property:P688 resource:Q24124503 }
SRY Sex-determining region Y protein hypothetical protein    BP2387
action is_in
entity SRY
action intersection
action find_reverse
entity Sex-determining region Y protein
relation encodes
action find_reverse
entity hypothetical protein    BP2387
relation encodes
['SRY', 'encodes', 'Sex-determining region Y protein'] ['SRY', 'encodes', 'hypothetical protein    BP2387']
ASK WHERE { resource:SRY property:encodes resource:Sex-determining_region_Y_protein . resource:SRY property:encodes resource:hypothetical_protein____BP2387 }
[]
nutrient
SYSTEM
YES and NO respectively
(Q14819281,P688,Q409114) (Q14819281,P688,Q24124503)
action is_in
entity Q14819281
action intersection
action find_reverse
entity Q409114
relation P688
action find_reverse
entity Q24124503
relation P688
[ANSWER]
['Q14819281', 'P688', 'Q409114'] ['Q14819281', 'P688', 'Q24124503']
ASK WHERE { resource:Q14819281 property:P688 resource:Q409114 . resource:Q14819281 property:P688 resource:Q24124503 }
YES and NO respectively
action is_in
entity SRY
action intersection
action find_reverse
entity Sex-determining region Y protein
relation encodes
action find_reverse
entity hypothetical protein    BP2387
relation encodes
['SRY', 'encodes', 'Sex-determining region Y protein'] ['SRY', 'encodes', 'hypothetical protein    BP2387']
ASK WHERE { resource:SRY property:encodes resource:Sex-determining_region_Y_protein . resource:SRY property:encodes resource:hypothetical_protein____BP2387 }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q409114 Q23104617
P702
Q863908
USER
Is maltose/maltodextrin transporter ATP-binding protein    NRG857_20170 the gene that encodes Sex-determining region Y protein ?
(Q409114,P702,Q23104617)
action is_in
entity Q23104617
action find
entity Q409114
relation P702
['Q409114', 'P702', 'Q23104617']
ASK WHERE { resource:Q409114 property:P702 resource:Q23104617 }
Sex-determining region Y protein maltose/maltodextrin transporter ATP-binding protein    NRG857_20170
action is_in
entity maltose/maltodextrin transporter ATP-binding protein    NRG857_20170
action find
entity Sex-determining region Y protein
relation encoded by
['Sex-determining region Y protein', 'encoded by', 'maltose/maltodextrin transporter ATP-binding protein    NRG857_20170']
ASK WHERE { resource:Sex-determining_region_Y_protein property:encoded_by resource:maltose/maltodextrin_transporter_ATP-binding_protein____NRG857_20170 }
[]
nucleic acid sequence
SYSTEM
NO
(Q409114,P702,Q23104617)
action is_in
entity Q23104617
action find
entity Q409114
relation P702
[ANSWER]
['Q409114', 'P702', 'Q23104617']
ASK WHERE { resource:Q409114 property:P702 resource:Q23104617 }
No
action is_in
entity maltose/maltodextrin transporter ATP-binding protein    NRG857_20170
action find
entity Sex-determining region Y protein
relation encoded by
['Sex-determining region Y protein', 'encoded by', 'maltose/maltodextrin transporter ATP-binding protein    NRG857_20170']
ASK WHERE { resource:Sex-determining_region_Y_protein property:encoded_by resource:maltose/maltodextrin_transporter_ATP-binding_protein____NRG857_20170 }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q409114
P681
Q15989253
USER
Which are the parts that are a component of that nutrient ?
action filter_type
action find
entity Q409114
relation P681
type Q15989253
SELECT DISTINCT ?y WHERE { resource:Q409114 property:P681 ?y . ?y rdf:type ontology:Q15989253 }
Sex-determining region Y protein
action filter_type
action find
entity Sex-determining region Y protein
relation cell component
type part
SELECT DISTINCT ?y WHERE { resource:Sex-determining_region_Y_protein property:cell_component ?y . ?y rdf:type ontology:part }
[]
part
Q79899 Q40260
SYSTEM
cytoplasm, nucleus
Q79899 Q40260
action filter_type
action find
entity Q409114
relation P681
type Q15989253
The parts that are a component of that nutrient are the [ANSWERS]
SELECT DISTINCT ?y WHERE { resource:Q409114 property:P681 ?y . ?y rdf:type ontology:Q15989253 }
cytoplasm nucleus
The parts that are a component of that nutrient are the cytoplasm and nucleus
cytoplasm nucleus
action filter_type
action find
entity Sex-determining region Y protein
relation cell component
type part
SELECT DISTINCT ?y WHERE { resource:Sex-determining_region_Y_protein property:cell_component ?y . ?y rdf:type ontology:part }
[]
Verification (Boolean) (All)
Verification|one entity, multiple entities (as object) referred indirectly
Q23050938
P681
Q181394
USER
Are those parts a cell component of putative chemotaxis MotB protein    RSP_1302 ?
(Q23050938,P681,Q79899) (Q23050938,P681,Q40260)
action is_in
entity prev_answer
action find
entity Q23050938
relation P681
['Q23050938', 'P681', 'Q79899'] ['Q23050938', 'P681', 'Q40260']
ASK WHERE { resource:Q23050938 property:P681 ?g . VALUES ( ?g ) { ( resource:Q79899 ) ( resource:Q40260 ) } }
putative chemotaxis MotB protein    RSP_1302
action is_in
entity prev_answer
action find
entity putative chemotaxis MotB protein    RSP_1302
relation cell component
['putative chemotaxis MotB protein    RSP_1302', 'cell component', 'cytoplasm'] ['putative chemotaxis MotB protein    RSP_1302', 'cell component', 'nucleus']
ASK WHERE { resource:putative_chemotaxis_MotB_protein____RSP_1302 property:cell_component ?g . VALUES ( ?g ) { ( resource:cytoplasm ) ( resource:nucleus ) } }
[]
nutrient
SYSTEM
NO
(Q23050938,P681,Q79899) (Q23050938,P681,Q40260)
action is_in
entity prev_answer
action find
entity Q23050938
relation P681
[ANSWER]
['Q23050938', 'P681', 'Q79899'] ['Q23050938', 'P681', 'Q40260']
ASK WHERE { resource:Q23050938 property:P681 ?g . VALUES ( ?g ) { ( resource:Q79899 ) ( resource:Q40260 ) } }
No
action is_in
entity prev_answer
action find
entity putative chemotaxis MotB protein    RSP_1302
relation cell component
['putative chemotaxis MotB protein    RSP_1302', 'cell component', 'cytoplasm'] ['putative chemotaxis MotB protein    RSP_1302', 'cell component', 'nucleus']
ASK WHERE { resource:putative_chemotaxis_MotB_protein____RSP_1302 property:cell_component ?g . VALUES ( ?g ) { ( resource:cytoplasm ) ( resource:nucleus ) } }
[]