Simple Question (Direct)
Simple Question
Q21133841
P681
Q5058355
USER
Which is the cell component of Shadow of prion protein ?
(Q21133841,P681,c(Q5058355))
action filter_type
action find
entity Q21133841
relation P681
type Q5058355
['Q21133841', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?y WHERE { resource:Q21133841 property:P681 ?y . ?y rdf:type ontology:Q5058355 }
Shadow of prion protein
action filter_type
action find
entity Shadow of prion protein
relation cell component
type cellular component
['Shadow of prion protein', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?y WHERE { resource:Shadow_of_prion_protein property:cell_component ?y . ?y rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q21133841,P681,c(Q5058355))
action filter_type
action find
entity Q21133841
relation P681
type Q5058355
The [ANSWER] is the cell component of Shadow of prion protein
['Q21133841', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?y WHERE { resource:Q21133841 property:P681 ?y . ?y rdf:type ontology:Q5058355 }
plasma membrane
The plasma membrane is the cell component of Shadow of prion protein
plasma membrane
action filter_type
action find
entity Shadow of prion protein
relation cell component
type cellular component
['Shadow of prion protein', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?y WHERE { resource:Shadow_of_prion_protein property:cell_component ?y . ?y rdf:type ontology:cellular_component }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21133841
P703
Q16521
USER
Which taxon is that nutrient found in ?
(Q29548,P703,c(Q16521))
action filter_type
action find
entity Q21133841
relation P703
type Q16521
['Q29548', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?w WHERE { resource:Q21133841 property:P703 ?w . ?w rdf:type ontology:Q16521 }
Shadow of prion protein
action filter_type
action find
entity Shadow of prion protein
relation found in taxon
type taxon
['plasma membrane', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?w WHERE { resource:Shadow_of_prion_protein property:found_in_taxon ?w . ?w rdf:type ontology:taxon }
[]
taxon
Q15978631
SYSTEM
Homo sapiens
Q15978631
(Q29548,P703,c(Q16521))
action filter_type
action find
entity Q21133841
relation P703
type Q16521
That nutrient is found in [ANSWER]
['Q29548', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?w WHERE { resource:Q21133841 property:P703 ?w . ?w rdf:type ontology:Q16521 }
Homo sapiens
That nutrient is found in Homo sapiens
Homo sapiens
action filter_type
action find
entity Shadow of prion protein
relation found in taxon
type taxon
['plasma membrane', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?w WHERE { resource:Shadow_of_prion_protein property:found_in_taxon ?w . ?w rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q15978631 Q21107317
P703
Q181394
USER
Is PAXIP1-associated glutamate-rich protein 1 found in the taxon that one ?
(Q21107317,P703,Q15978631)
action is_in
entity Q15978631
action find
entity Q21107317
relation P703
['Q21107317', 'P703', 'Q15978631']
ASK WHERE { resource:Q21107317 property:P703 resource:Q15978631 }
Homo sapiens PAXIP1-associated glutamate-rich protein 1
action is_in
entity Homo sapiens
action find
entity PAXIP1-associated glutamate-rich protein 1
relation found in taxon
['PAXIP1-associated glutamate-rich protein 1', 'found in taxon', 'Homo sapiens']
ASK WHERE { resource:PAXIP1-associated_glutamate-rich_protein_1 property:found_in_taxon resource:Homo_sapiens }
[]
nutrient
SYSTEM
YES
(Q21107317,P703,Q15978631)
action is_in
entity Q15978631
action find
entity Q21107317
relation P703
[ANSWER]
['Q21107317', 'P703', 'Q15978631']
ASK WHERE { resource:Q21107317 property:P703 resource:Q15978631 }
Yes
action is_in
entity Homo sapiens
action find
entity PAXIP1-associated glutamate-rich protein 1
relation found in taxon
['PAXIP1-associated glutamate-rich protein 1', 'found in taxon', 'Homo sapiens']
ASK WHERE { resource:PAXIP1-associated_glutamate-rich_protein_1 property:found_in_taxon resource:Homo_sapiens }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q21133841
P688
Q863908
USER
Which nucleic acid sequence encodes Shadow of prion protein ?
(c(Q863908),P688,Q21133841)
action filter_type
action find_reverse
entity Q21133841
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21133841']
SELECT DISTINCT ?h WHERE { ?h property:P688 resource:Q21133841 . ?h rdf:type ontology:Q863908 }
Shadow of prion protein
action filter_type
action find_reverse
entity Shadow of prion protein
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Shadow of prion protein']
SELECT DISTINCT ?h WHERE { ?h property:encodes resource:Shadow_of_prion_protein . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18058998
SYSTEM
SPRN
Q18058998
(c(Q863908),P688,Q21133841)
action filter_type
action find_reverse
entity Q21133841
relation P688
type Q863908
[ANSWER] encodes Shadow of prion protein
[{'concept': 'Q863908'}, 'P688', 'Q21133841']
SELECT DISTINCT ?h WHERE { ?h property:P688 resource:Q21133841 . ?h rdf:type ontology:Q863908 }
SPRN
SPRN encodes Shadow of prion protein
SPRN
action filter_type
action find_reverse
entity Shadow of prion protein
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Shadow of prion protein']
SELECT DISTINCT ?h WHERE { ?h property:encodes resource:Shadow_of_prion_protein . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21133841
P702
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(Q18058998,P702,c(Q863908))
action filter_type
action find
entity Q21133841
relation P702
type Q863908
['Q18058998', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q21133841 property:P702 ?c . ?c rdf:type ontology:Q863908 }
Shadow of prion protein
action filter_type
action find
entity Shadow of prion protein
relation encoded by
type nucleic acid sequence
['SPRN', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:Shadow_of_prion_protein property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18058998
SYSTEM
SPRN
Q18058998
(Q18058998,P702,c(Q863908))
action filter_type
action find
entity Q21133841
relation P702
type Q863908
[ANSWER] encodes that nutrient
['Q18058998', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?c WHERE { resource:Q21133841 property:P702 ?c . ?c rdf:type ontology:Q863908 }
SPRN
SPRN encodes that nutrient
SPRN
action filter_type
action find
entity Shadow of prion protein
relation encoded by
type nucleic acid sequence
['SPRN', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?c WHERE { resource:Shadow_of_prion_protein property:encoded_by ?c . ?c rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q18058998
P684
Q863908
USER
Which is the species that has that one as its orthologous gene ?
(c(Q863908),P684,Q18058998)
action filter_type
action find
entity Q18058998
relation P684
type Q863908
[{'concept': 'Q863908'}, 'P684', 'Q18058998']
SELECT DISTINCT ?d WHERE { resource:Q18058998 property:P684 ?d . ?d rdf:type ontology:Q863908 }
SPRN
action filter_type
action find
entity SPRN
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'SPRN']
SELECT DISTINCT ?d WHERE { resource:SPRN property:ortholog ?d . ?d rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q18296375
SYSTEM
Sprn
Q18296375
(c(Q863908),P684,Q18058998)
action filter_type
action find
entity Q18058998
relation P684
type Q863908
[ANSWER] is the species that has that one as its orthologous gene
[{'concept': 'Q863908'}, 'P684', 'Q18058998']
SELECT DISTINCT ?d WHERE { resource:Q18058998 property:P684 ?d . ?d rdf:type ontology:Q863908 }
Sprn
Sprn is the species that has that one as its orthologous gene
Sprn
action filter_type
action find
entity SPRN
relation ortholog
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'ortholog', 'SPRN']
SELECT DISTINCT ?d WHERE { resource:SPRN property:ortholog ?d . ?d rdf:type ontology:nucleic_acid_sequence }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, subject is indirect
Q18296375 Q24223308
P688
Q181394
USER
Is that nucleic acid sequence an encoding of bll6359    bll6359 ?
(Q18296375,P688,Q24223308)
action is_in
entity Q24223308
action find
entity Q18296375
relation P688
['Q18296375', 'P688', 'Q24223308']
ASK WHERE { resource:Q18296375 property:P688 resource:Q24223308 }
Sprn bll6359    bll6359
action is_in
entity bll6359    bll6359
action find
entity Sprn
relation encodes
['Sprn', 'encodes', 'bll6359    bll6359']
ASK WHERE { resource:Sprn property:encodes resource:bll6359____bll6359 }
[]
nutrient
SYSTEM
NO
(Q18296375,P688,Q24223308)
action is_in
entity Q24223308
action find
entity Q18296375
relation P688
[ANSWER]
['Q18296375', 'P688', 'Q24223308']
ASK WHERE { resource:Q18296375 property:P688 resource:Q24223308 }
No
action is_in
entity bll6359    bll6359
action find
entity Sprn
relation encodes
['Sprn', 'encodes', 'bll6359    bll6359']
ASK WHERE { resource:Sprn property:encodes resource:bll6359____bll6359 }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q8386 Q181394
USER
How many nutrients do exactly 20 drugs and nutrients communicate with ?
(c(Q8386)|c(Q181394),P129,c(Q181394))
action count
action equal
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 20
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?m ) WHERE { FILTER ( ?t = 20 ) . { SELECT DISTINCT ?e ( COUNT ( ?i ) AS ?t ) WHERE { VALUES ( ?w ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } . ?i rdf:type ?w } GROUP BY ?e } }
action count
action equal
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 20
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?m ) WHERE { FILTER ( ?t = 20 ) . { SELECT DISTINCT ?e ( COUNT ( ?i ) AS ?t ) WHERE { VALUES ( ?w ) { ( ontology:nutrient ) ( ontology:drug ) } . ?i rdf:type ?w } GROUP BY ?e } }
[]
nutrient drug nutrient
SYSTEM
3
Q287958 Q4734887 Q21115051
(c(Q8386)|c(Q181394),P129,c(Q181394))
action count
action equal
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action find_reverse_tuple_counts
relation P129
type Q181394
type Q181394
value 20
[ANSWER]
[[{'concept': 'Q8386'}, {'concept': 'Q181394'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?m ) WHERE { FILTER ( ?t = 20 ) . { SELECT DISTINCT ?e ( COUNT ( ?i ) AS ?t ) WHERE { VALUES ( ?w ) { ( ontology:Q181394 ) ( ontology:Q8386 ) } . ?i rdf:type ?w } GROUP BY ?e } }
Beta-1 adrenergic receptor Alpha-1D adrenergic receptor 5-hydroxytryptamine receptor 1E
3
action count
action equal
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type nutrient
value 20
[[{'concept': 'drug'}, {'concept': 'nutrient'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?e ) AS ?m ) WHERE { FILTER ( ?t = 20 ) . { SELECT DISTINCT ?e ( COUNT ( ?i ) AS ?t ) WHERE { VALUES ( ?w ) { ( ontology:nutrient ) ( ontology:drug ) } . ?i rdf:type ?w } GROUP BY ?e } }
[]