Simple Question (Direct)
Simple Question
Q27473959
P681
Q5058355
USER
Which is the cell component of propionate/acetate kinase    SDY_3307 ?
(Q27473959,P681,c(Q5058355))
action filter_type
action find
entity Q27473959
relation P681
type Q5058355
['Q27473959', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q5058355 . resource:Q27473959 property:P681 ?c }
propionate/acetate kinase    SDY_3307
action filter_type
action find
entity propionate/acetate kinase    SDY_3307
relation cell component
type cellular component
['propionate/acetate kinase    SDY_3307', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:cellular_component . resource:propionate/acetate_kinase____SDY_3307 property:cell_component ?c }
[]
cellular component
Q3824358
SYSTEM
intracellular
Q3824358
(Q27473959,P681,c(Q5058355))
action filter_type
action find
entity Q27473959
relation P681
type Q5058355
[ANSWER] is the cell component of propionate/acetate kinase SDY_3307
['Q27473959', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q5058355 . resource:Q27473959 property:P681 ?c }
intracellular
Intracellular is the cell component of propionate/acetate kinase SDY_3307
intracellular
action filter_type
action find
entity propionate/acetate kinase    SDY_3307
relation cell component
type cellular component
['propionate/acetate kinase    SDY_3307', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:cellular_component . resource:propionate/acetate_kinase____SDY_3307 property:cell_component ?c }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27473959
P688
Q863908
USER
Which nucleic acid sequence encodes propionate/acetate kinase    SDY_3307 ?
(c(Q863908),P688,Q27473959)
action filter_type
action find_reverse
entity Q27473959
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q27473959']
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q863908 . ?b property:P688 resource:Q27473959 }
propionate/acetate kinase    SDY_3307
action filter_type
action find_reverse
entity propionate/acetate kinase    SDY_3307
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'propionate/acetate kinase    SDY_3307']
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:nucleic_acid_sequence . ?b property:encodes resource:propionate/acetate_kinase____SDY_3307 }
[]
nucleic acid sequence
Q23136383
SYSTEM
propionate/acetate kinase    SDY_3307
Q23136383
(c(Q863908),P688,Q27473959)
action filter_type
action find_reverse
entity Q27473959
relation P688
type Q863908
Propionate/acetate kinase SDY 3307 encodes propionate/acetate kinase SDY_3307
[{'concept': 'Q863908'}, 'P688', 'Q27473959']
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:Q863908 . ?b property:P688 resource:Q27473959 }
propionate/acetate kinase    SDY_3307
Propionate/acetate kinase SDY 3307 encodes propionate/acetate kinase SDY_3307
propionate/acetate kinase    SDY_3307
action filter_type
action find_reverse
entity propionate/acetate kinase    SDY_3307
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'propionate/acetate kinase    SDY_3307']
SELECT DISTINCT ?b WHERE { ?b rdf:type ontology:nucleic_acid_sequence . ?b property:encodes resource:propionate/acetate_kinase____SDY_3307 }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23136383
P702
Q181394
USER
What is the gene that is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q23136383)
action filter_type
action find_reverse
entity Q23136383
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23136383']
SELECT DISTINCT ?c WHERE { ?c property:P702 resource:Q23136383 . ?c rdf:type ontology:Q181394 }
propionate/acetate kinase    SDY_3307
action filter_type
action find_reverse
entity propionate/acetate kinase    SDY_3307
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'propionate/acetate kinase    SDY_3307']
SELECT DISTINCT ?c WHERE { ?c property:encoded_by resource:propionate/acetate_kinase____SDY_3307 . ?c rdf:type ontology:nutrient }
[]
nutrient
Q27473959
SYSTEM
propionate/acetate kinase    SDY_3307
Q27473959
(c(Q181394),P702,Q23136383)
action filter_type
action find_reverse
entity Q23136383
relation P702
type Q181394
The gene that is encoded by that nucleic acid sequence is the propionate/acetate kinase SDY 3307
[{'concept': 'Q181394'}, 'P702', 'Q23136383']
SELECT DISTINCT ?c WHERE { ?c property:P702 resource:Q23136383 . ?c rdf:type ontology:Q181394 }
propionate/acetate kinase    SDY_3307
The gene that is encoded by that nucleic acid sequence is the propionate/acetate kinase SDY 3307
propionate/acetate kinase    SDY_3307
action filter_type
action find_reverse
entity propionate/acetate kinase    SDY_3307
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'propionate/acetate kinase    SDY_3307']
SELECT DISTINCT ?c WHERE { ?c property:encoded_by resource:propionate/acetate_kinase____SDY_3307 . ?c rdf:type ontology:nutrient }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23136383
P703
Q631147
USER
Which infraspecific name is propionate/acetate kinase    SDY_3307 found in ?
(Q23136383,P703,c(Q631147))
action filter_type
action find
entity Q23136383
relation P703
type Q631147
['Q23136383', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?k WHERE { resource:Q23136383 property:P703 ?k . ?k rdf:type ontology:Q631147 }
propionate/acetate kinase    SDY_3307
action filter_type
action find
entity propionate/acetate kinase    SDY_3307
relation found in taxon
type infraspecific name
['propionate/acetate kinase    SDY_3307', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?k WHERE { resource:propionate/acetate_kinase____SDY_3307 property:found_in_taxon ?k . ?k rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102940
SYSTEM
Shigella dysenteriae Sd197
Q21102940
(Q23136383,P703,c(Q631147))
action filter_type
action find
entity Q23136383
relation P703
type Q631147
[ANSWER] is propionate/acetate kinase SDY_3307 found in
['Q23136383', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?k WHERE { resource:Q23136383 property:P703 ?k . ?k rdf:type ontology:Q631147 }
Shigella dysenteriae Sd197
Shigella dysenteriae Sd197 is propionate/acetate kinase SDY_3307 found in
Shigella dysenteriae Sd197
action filter_type
action find
entity propionate/acetate kinase    SDY_3307
relation found in taxon
type infraspecific name
['propionate/acetate kinase    SDY_3307', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?k WHERE { resource:propionate/acetate_kinase____SDY_3307 property:found_in_taxon ?k . ?k rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation|Incomplete
Q23421564 Q23136383
P703
Q631147
USER
Or regulatory protein AmpE    SF0108?
OR((Q23136383,P703,c(Q631147)), (Q23421564,P703,c(Q631147)))
action filter_type
action union
action find
entity Q23136383
relation P703
action find
entity Q23421564
relation P703
type Q631147
{'OR': [['Q23136383', 'P703', {'concept': 'Q631147'}], ['Q23421564', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q23136383 property:P703 ?q } UNION { resource:Q23421564 property:P703 ?q } } . ?q rdf:type ontology:Q631147 }
regulatory protein AmpE    SF0108 propionate/acetate kinase    SDY_3307
action filter_type
action union
action find
entity propionate/acetate kinase    SDY_3307
relation found in taxon
action find
entity regulatory protein AmpE    SF0108
relation found in taxon
type infraspecific name
{'OR': [['propionate/acetate kinase    SDY_3307', 'found in taxon', {'concept': 'infraspecific name'}], ['regulatory protein AmpE    SF0108', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?q WHERE { { { resource:propionate/acetate_kinase____SDY_3307 property:found_in_taxon ?q } UNION { resource:regulatory_protein_AmpE____SF0108 property:found_in_taxon ?q } } . ?q rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102941 Q21102940
SYSTEM
Shigella flexneri 2a str. 301, Shigella dysenteriae Sd197
Q21102941 Q21102940
OR((Q23136383,P703,c(Q631147)), (Q23421564,P703,c(Q631147)))
action filter_type
action union
action find
entity Q23136383
relation P703
action find
entity Q23421564
relation P703
type Q631147
[ANSWERS]
{'OR': [['Q23136383', 'P703', {'concept': 'Q631147'}], ['Q23421564', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?q WHERE { { { resource:Q23136383 property:P703 ?q } UNION { resource:Q23421564 property:P703 ?q } } . ?q rdf:type ontology:Q631147 }
Shigella flexneri 2a str. 301 Shigella dysenteriae Sd197
Shigella flexneri 2a str. 301 Shigella dysenteriae Sd197
action filter_type
action union
action find
entity propionate/acetate kinase    SDY_3307
relation found in taxon
action find
entity regulatory protein AmpE    SF0108
relation found in taxon
type infraspecific name
{'OR': [['propionate/acetate kinase    SDY_3307', 'found in taxon', {'concept': 'infraspecific name'}], ['regulatory protein AmpE    SF0108', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?q WHERE { { { resource:propionate/acetate_kinase____SDY_3307 property:found_in_taxon ?q } UNION { resource:regulatory_protein_AmpE____SF0108 property:found_in_taxon ?q } } . ?q rdf:type ontology:infraspecific_name }
[]