Simple Question (Direct)
Simple Question
Q22923519
P680
Q44424
USER
What represents the molecular function of molybdopterin biosynthesis protein MoeY    Rv1355c ?
(Q22923519,P680,c(Q44424))
action filter_type
action find
entity Q22923519
relation P680
type Q44424
['Q22923519', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?h WHERE { resource:Q22923519 property:P680 ?h . ?h rdf:type ontology:Q44424 }
molybdopterin biosynthesis protein MoeY    Rv1355c
action filter_type
action find
entity molybdopterin biosynthesis protein MoeY    Rv1355c
relation molecular function
type chemical bond
['molybdopterin biosynthesis protein MoeY    Rv1355c', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?h WHERE { resource:molybdopterin_biosynthesis_protein_MoeY____Rv1355c property:molecular_function ?h . ?h rdf:type ontology:chemical_bond }
[]
chemical bond
Q14633865 Q14860850
SYSTEM
zinc ion binding, magnesium ion binding
Q14633865 Q14860850
(Q22923519,P680,c(Q44424))
action filter_type
action find
entity Q22923519
relation P680
type Q44424
The [ANSWERS] represent the molecular function of molybdopterin biosynthesis protein MoeY Rv1355c
['Q22923519', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?h WHERE { resource:Q22923519 property:P680 ?h . ?h rdf:type ontology:Q44424 }
zinc ion binding magnesium ion binding
The zinc ion binding and magnesium ion binding represent the molecular function of molybdopterin biosynthesis protein MoeY Rv1355c
zinc ion binding magnesium ion binding
action filter_type
action find
entity molybdopterin biosynthesis protein MoeY    Rv1355c
relation molecular function
type chemical bond
['molybdopterin biosynthesis protein MoeY    Rv1355c', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?h WHERE { resource:molybdopterin_biosynthesis_protein_MoeY____Rv1355c property:molecular_function ?h . ?h rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22923519
P681
Q5058355
USER
Which is the cell component of molybdopterin biosynthesis protein MoeY    Rv1355c ?
(Q22923519,P681,c(Q5058355))
action filter_type
action find
entity Q22923519
relation P681
type Q5058355
['Q22923519', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?u WHERE { resource:Q22923519 property:P681 ?u . ?u rdf:type ontology:Q5058355 }
molybdopterin biosynthesis protein MoeY    Rv1355c
action filter_type
action find
entity molybdopterin biosynthesis protein MoeY    Rv1355c
relation cell component
type cellular component
['molybdopterin biosynthesis protein MoeY    Rv1355c', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?u WHERE { resource:molybdopterin_biosynthesis_protein_MoeY____Rv1355c property:cell_component ?u . ?u rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q22923519,P681,c(Q5058355))
action filter_type
action find
entity Q22923519
relation P681
type Q5058355
The [ANSWER] is the cell component of molybdopterin biosynthesis protein MoeY Rv1355c
['Q22923519', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?u WHERE { resource:Q22923519 property:P681 ?u . ?u rdf:type ontology:Q5058355 }
plasma membrane
The plasma membrane is the cell component of molybdopterin biosynthesis protein MoeY Rv1355c
plasma membrane
action filter_type
action find
entity molybdopterin biosynthesis protein MoeY    Rv1355c
relation cell component
type cellular component
['molybdopterin biosynthesis protein MoeY    Rv1355c', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?u WHERE { resource:molybdopterin_biosynthesis_protein_MoeY____Rv1355c property:cell_component ?u . ?u rdf:type ontology:cellular_component }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21499394
Q5058355
USER
And what about C-terminal-binding protein 1?
(Q21499394,P681,c(Q5058355))
action filter_type
action find
entity Q21499394
relation P681
type Q5058355
['Q21499394', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q5058355 . resource:Q21499394 property:P681 ?c }
C-terminal-binding protein 1
action filter_type
action find
entity C-terminal-binding protein 1
relation cell component
type cellular component
['C-terminal-binding protein 1', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:cellular_component . resource:C-terminal-binding_protein_1 property:cell_component ?c }
[]
cellular component
Q14864663
SYSTEM
transcriptional repressor complex
Q14864663
(Q21499394,P681,c(Q5058355))
action filter_type
action find
entity Q21499394
relation P681
type Q5058355
[ANSWER]
['Q21499394', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q5058355 . resource:Q21499394 property:P681 ?c }
transcriptional repressor complex
transcriptional repressor complex
action filter_type
action find
entity C-terminal-binding protein 1
relation cell component
type cellular component
['C-terminal-binding protein 1', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:cellular_component . resource:C-terminal-binding_protein_1 property:cell_component ?c }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q21499394
P703
Q16521
USER
Which taxon is that nutrient found in ?
(Q14864663,P703,c(Q16521))
action filter_type
action find
entity Q21499394
relation P703
type Q16521
['Q14864663', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { resource:Q21499394 property:P703 ?i . ?i rdf:type ontology:Q16521 }
C-terminal-binding protein 1
action filter_type
action find
entity C-terminal-binding protein 1
relation found in taxon
type taxon
['transcriptional repressor complex', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { resource:C-terminal-binding_protein_1 property:found_in_taxon ?i . ?i rdf:type ontology:taxon }
[]
taxon
Q83310
SYSTEM
Mus musculus
Q83310
(Q14864663,P703,c(Q16521))
action filter_type
action find
entity Q21499394
relation P703
type Q16521
That nutrient is found in [ANSWER]
['Q14864663', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?i WHERE { resource:Q21499394 property:P703 ?i . ?i rdf:type ontology:Q16521 }
Mus musculus
That nutrient is found in Mus musculus
Mus musculus
action filter_type
action find
entity C-terminal-binding protein 1
relation found in taxon
type taxon
['transcriptional repressor complex', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?i WHERE { resource:C-terminal-binding_protein_1 property:found_in_taxon ?i . ?i rdf:type ontology:taxon }
[]
Verification (Boolean) (All)
Verification|2 entities, one direct and one indirect, object is indirect
Q83310 Q23595953
P703
Q181394
USER
Is hypothetical protein    aq_aa31 found in the taxon that one ?
(Q23595953,P703,Q83310)
action is_in
entity Q23595953
action find
entity Q83310
relation P703
['Q23595953', 'P703', 'Q83310']
ASK WHERE { resource:Q83310 property:P703 resource:Q23595953 }
Mus musculus hypothetical protein    aq_aa31
action is_in
entity hypothetical protein    aq_aa31
action find
entity Mus musculus
relation found in taxon
['hypothetical protein    aq_aa31', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Mus_musculus property:found_in_taxon resource:hypothetical_protein____aq_aa31 }
[]
nutrient
SYSTEM
NO
(Q23595953,P703,Q83310)
action is_in
entity Q23595953
action find
entity Q83310
relation P703
[ANSWER]
['Q23595953', 'P703', 'Q83310']
ASK WHERE { resource:Q83310 property:P703 resource:Q23595953 }
No
action is_in
entity hypothetical protein    aq_aa31
action find
entity Mus musculus
relation found in taxon
['hypothetical protein    aq_aa31', 'found in taxon', 'Mus musculus']
ASK WHERE { resource:Mus_musculus property:found_in_taxon resource:hypothetical_protein____aq_aa31 }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q22923519
P702
Q863908
USER
What encodes molybdopterin biosynthesis protein MoeY    Rv1355c ?
(Q22923519,P702,c(Q863908))
action filter_type
action find
entity Q22923519
relation P702
type Q863908
['Q22923519', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?s WHERE { resource:Q22923519 property:P702 ?s . ?s rdf:type ontology:Q863908 }
molybdopterin biosynthesis protein MoeY    Rv1355c
action filter_type
action find
entity molybdopterin biosynthesis protein MoeY    Rv1355c
relation encoded by
type nucleic acid sequence
['molybdopterin biosynthesis protein MoeY    Rv1355c', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?s WHERE { resource:molybdopterin_biosynthesis_protein_MoeY____Rv1355c property:encoded_by ?s . ?s rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q22921915
SYSTEM
molybdopterin biosynthesis protein MoeY    Rv1355c
Q22921915
(Q22923519,P702,c(Q863908))
action filter_type
action find
entity Q22923519
relation P702
type Q863908
Molybdopterin biosynthesis protein MoeY Rv1355c encodes molybdopterin biosynthesis protein MoeY Rv1355c
['Q22923519', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?s WHERE { resource:Q22923519 property:P702 ?s . ?s rdf:type ontology:Q863908 }
molybdopterin biosynthesis protein MoeY    Rv1355c
Molybdopterin biosynthesis protein MoeY Rv1355c encodes molybdopterin biosynthesis protein MoeY Rv1355c
molybdopterin biosynthesis protein MoeY    Rv1355c
action filter_type
action find
entity molybdopterin biosynthesis protein MoeY    Rv1355c
relation encoded by
type nucleic acid sequence
['molybdopterin biosynthesis protein MoeY    Rv1355c', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?s WHERE { resource:molybdopterin_biosynthesis_protein_MoeY____Rv1355c property:encoded_by ?s . ?s rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23466129
Q863908
USER
And also tell me about CreA    Rru_A2083?
(Q23466129,P702,c(Q863908))
action filter_type
action find
entity Q23466129
relation P702
type Q863908
['Q23466129', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q23466129 property:P702 ?a . ?a rdf:type ontology:Q863908 }
CreA    Rru_A2083
action filter_type
action find
entity CreA    Rru_A2083
relation encoded by
type nucleic acid sequence
['CreA    Rru_A2083', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:CreA____Rru_A2083 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23373843
SYSTEM
CreA    Rru_A2083
Q23373843
(Q23466129,P702,c(Q863908))
action filter_type
action find
entity Q23466129
relation P702
type Q863908
[ANSWER]
['Q23466129', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?a WHERE { resource:Q23466129 property:P702 ?a . ?a rdf:type ontology:Q863908 }
CreA    Rru_A2083
CreA    Rru_A2083
action filter_type
action find
entity CreA    Rru_A2083
relation encoded by
type nucleic acid sequence
['CreA    Rru_A2083', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?a WHERE { resource:CreA____Rru_A2083 property:encoded_by ?a . ?a rdf:type ontology:nucleic_acid_sequence }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type|Indirect
P703
Q631147
USER
How many infraspecific names are that nucleic acid sequence found in ?
(Q23373843,P703,c(Q631147))
action count
action filter_type
action find
entity Q23373843
relation P703
type Q631147
['Q23373843', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?y ) WHERE { resource:Q23373843 property:P703 ?l . ?l rdf:type ontology:Q631147 }
action count
action filter_type
action find
entity CreA    Rru_A2083
relation found in taxon
type infraspecific name
['CreA    Rru_A2083', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?y ) WHERE { resource:CreA____Rru_A2083 property:found_in_taxon ?l . ?l rdf:type ontology:infraspecific_name }
[]
infraspecific name
SYSTEM
1
Q21102954
(Q23373843,P703,c(Q631147))
action count
action filter_type
action find
entity Q23373843
relation P703
type Q631147
[ANSWER]
['Q23373843', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?y ) WHERE { resource:Q23373843 property:P703 ?l . ?l rdf:type ontology:Q631147 }
Rhodospirillum rubrum ATCC 11170
1
action count
action filter_type
action find
entity CreA    Rru_A2083
relation found in taxon
type infraspecific name
['CreA    Rru_A2083', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ( COUNT ( ?l ) AS ?y ) WHERE { resource:CreA____Rru_A2083 property:found_in_taxon ?l . ?l rdf:type ontology:infraspecific_name }
[]