Simple Question (Direct)
Simple Question
Q23540317
P703
Q631147
USER
Which taxon is bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573 a part of ?
(Q23540317,P703,c(Q631147))
action filter_type
action find
entity Q23540317
relation P703
type Q631147
['Q23540317', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?w WHERE { resource:Q23540317 property:P703 ?w . ?w rdf:type ontology:Q631147 }
bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573
action filter_type
action find
entity bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573
relation found in taxon
type infraspecific name
['bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?w WHERE { resource:bifunctional_protein:_transcription_regulator;_sugar_kinase,_ROK_family____lp_1573 property:found_in_taxon ?w . ?w rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102979
SYSTEM
Lactobacillus plantarum WCFS1
Q21102979
(Q23540317,P703,c(Q631147))
action filter_type
action find
entity Q23540317
relation P703
type Q631147
[ANSWER] is bifunctional protein: transcription regulator; sugar kinase, ROK family lp_1573 a part of
['Q23540317', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?w WHERE { resource:Q23540317 property:P703 ?w . ?w rdf:type ontology:Q631147 }
Lactobacillus plantarum WCFS1
Lactobacillus plantarum WCFS1 is bifunctional protein: transcription regulator; sugar kinase, ROK family lp_1573 a part of
Lactobacillus plantarum WCFS1
action filter_type
action find
entity bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573
relation found in taxon
type infraspecific name
['bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?w WHERE { resource:bifunctional_protein:_transcription_regulator;_sugar_kinase,_ROK_family____lp_1573 property:found_in_taxon ?w . ?w rdf:type ontology:infraspecific_name }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23540317
P681
Q15989253
USER
Which is the cell component of that nutrient ?
(Q21102979,P681,c(Q15989253))
action filter_type
action find
entity Q23540317
relation P681
type Q15989253
['Q21102979', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:Q15989253 . resource:Q23540317 property:P681 ?v }
bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573
action filter_type
action find
entity bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573
relation cell component
type part
['Lactobacillus plantarum WCFS1', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:part . resource:bifunctional_protein:_transcription_regulator;_sugar_kinase,_ROK_family____lp_1573 property:cell_component ?v }
[]
part
Q79899
SYSTEM
cytoplasm
Q79899
(Q21102979,P681,c(Q15989253))
action filter_type
action find
entity Q23540317
relation P681
type Q15989253
[ANSWER] is the cell component of that nutrient
['Q21102979', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:Q15989253 . resource:Q23540317 property:P681 ?v }
cytoplasm
Cytoplasm is the cell component of that nutrient
cytoplasm
action filter_type
action find
entity bifunctional protein: transcription regulator; sugar kinase, ROK family    lp_1573
relation cell component
type part
['Lactobacillus plantarum WCFS1', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?v WHERE { ?v rdf:type ontology:part . resource:bifunctional_protein:_transcription_regulator;_sugar_kinase,_ROK_family____lp_1573 property:cell_component ?v }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23450496
Q15989253
USER
And what about ABC transporter permease protein    BF2155?
(Q23450496,P681,c(Q15989253))
action filter_type
action find
entity Q23450496
relation P681
type Q15989253
['Q23450496', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?o WHERE { resource:Q23450496 property:P681 ?o . ?o rdf:type ontology:Q15989253 }
ABC transporter permease protein    BF2155
action filter_type
action find
entity ABC transporter permease protein    BF2155
relation cell component
type part
['ABC transporter permease protein    BF2155', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?o WHERE { resource:ABC_transporter_permease_protein____BF2155 property:cell_component ?o . ?o rdf:type ontology:part }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q23450496,P681,c(Q15989253))
action filter_type
action find
entity Q23450496
relation P681
type Q15989253
[ANSWER]
['Q23450496', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?o WHERE { resource:Q23450496 property:P681 ?o . ?o rdf:type ontology:Q15989253 }
membrane
membrane
action filter_type
action find
entity ABC transporter permease protein    BF2155
relation cell component
type part
['ABC transporter permease protein    BF2155', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?o WHERE { resource:ABC_transporter_permease_protein____BF2155 property:cell_component ?o . ?o rdf:type ontology:part }
[]
Simple Question (Ellipsis)
Incomplete|object parent is changed, subject and predicate remain same
Q23450496
Q5058355
USER
And which cellular component?
(Q23450496,P681,c(Q5058355))
action filter_type
action find
entity Q23450496
relation P681
type Q5058355
['Q23450496', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q5058355 . resource:Q23450496 property:P681 ?w }
ABC transporter permease protein    BF2155
action filter_type
action find
entity ABC transporter permease protein    BF2155
relation cell component
type cellular component
['ABC transporter permease protein    BF2155', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:cellular_component . resource:ABC_transporter_permease_protein____BF2155 property:cell_component ?w }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q23450496,P681,c(Q5058355))
action filter_type
action find
entity Q23450496
relation P681
type Q5058355
[ANSWER]
['Q23450496', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:Q5058355 . resource:Q23450496 property:P681 ?w }
plasma membrane
plasma membrane
action filter_type
action find
entity ABC transporter permease protein    BF2155
relation cell component
type cellular component
['ABC transporter permease protein    BF2155', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?w WHERE { ?w rdf:type ontology:cellular_component . resource:ABC_transporter_permease_protein____BF2155 property:cell_component ?w }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P129
Q181394 Q79529 Q8386
USER
How many nutrients do atleast 78 chemical substances or drugs collaborate with ?
(c(Q79529)|c(Q8386),P129,c(Q181394))
action count
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 78
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?b ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?o ) AS ?e ) WHERE { { ?o property:P129 ?j . ?j rdf:type ontology:Q181394 . ?o rdf:type ontology:Q79529 } UNION { ?o property:P129 ?j . ?j rdf:type ontology:Q181394 . ?o rdf:type ontology:Q8386 } } GROUP BY ?j } . FILTER ( ?e >= 78 ) }
action count
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 78
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?b ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?o ) AS ?e ) WHERE { { ?o property:physically_interacts_with ?j . ?j rdf:type ontology:nutrient . ?o rdf:type ontology:chemical_substance } UNION { ?o property:physically_interacts_with ?j . ?j rdf:type ontology:nutrient . ?o rdf:type ontology:drug } } GROUP BY ?j } . FILTER ( ?e >= 78 ) }
[]
nutrient chemical substance drug
SYSTEM
2
Q21115043 Q1949517
(c(Q79529)|c(Q8386),P129,c(Q181394))
action count
action atleast
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
value 78
[ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?b ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?o ) AS ?e ) WHERE { { ?o property:P129 ?j . ?j rdf:type ontology:Q181394 . ?o rdf:type ontology:Q79529 } UNION { ?o property:P129 ?j . ?j rdf:type ontology:Q181394 . ?o rdf:type ontology:Q8386 } } GROUP BY ?j } . FILTER ( ?e >= 78 ) }
5-hydroxytryptamine receptor 1A 5-hydroxytryptamine receptor 2A
2
action count
action atleast
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
value 78
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?j ) AS ?b ) WHERE { { SELECT DISTINCT ?j ( COUNT ( ?o ) AS ?e ) WHERE { { ?o property:physically_interacts_with ?j . ?j rdf:type ontology:nutrient . ?o rdf:type ontology:chemical_substance } UNION { ?o property:physically_interacts_with ?j . ?j rdf:type ontology:nutrient . ?o rdf:type ontology:drug } } GROUP BY ?j } . FILTER ( ?e >= 78 ) }
[]