Simple Question (Direct)
Simple Question
Q23437905
P680
Q44424
USER
What represents the molecular function of trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299 ?
(Q23437905,P680,c(Q44424))
action filter_type
action find
entity Q23437905
relation P680
type Q44424
['Q23437905', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?z WHERE { resource:Q23437905 property:P680 ?z . ?z rdf:type ontology:Q44424 }
trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
action filter_type
action find
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
relation molecular function
type chemical bond
['trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?z WHERE { resource:trimethylamine_N-oxide_(TMAO)_reductase_I,_catalytic_subunit____VF_A0299 property:molecular_function ?z . ?z rdf:type ontology:chemical_bond }
[]
chemical bond
Q14916240 Q13667380
SYSTEM
molybdenum ion binding, metal ion binding
Q14916240 Q13667380
(Q23437905,P680,c(Q44424))
action filter_type
action find
entity Q23437905
relation P680
type Q44424
[ANSWERS] represent the molecular function of trimethylamine N-oxide (TMAO) reductase I, catalytic subunit VF_A0299
['Q23437905', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?z WHERE { resource:Q23437905 property:P680 ?z . ?z rdf:type ontology:Q44424 }
molybdenum ion binding metal ion binding
Molybdenum ion binding and metal ion binding represent the molecular function of trimethylamine N-oxide (TMAO) reductase I, catalytic subunit VF_A0299
molybdenum ion binding metal ion binding
action filter_type
action find
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
relation molecular function
type chemical bond
['trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?z WHERE { resource:trimethylamine_N-oxide_(TMAO)_reductase_I,_catalytic_subunit____VF_A0299 property:molecular_function ?z . ?z rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23437905
P688
Q863908
USER
What is the nucleic acid sequence that is encoded by trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299 ?
(c(Q863908),P688,Q23437905)
action filter_type
action find_reverse
entity Q23437905
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23437905']
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q863908 . ?i property:P688 resource:Q23437905 }
trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
action filter_type
action find_reverse
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299']
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:nucleic_acid_sequence . ?i property:encodes resource:trimethylamine_N-oxide_(TMAO)_reductase_I,_catalytic_subunit____VF_A0299 }
[]
nucleic acid sequence
Q23152148
SYSTEM
trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
Q23152148
(c(Q863908),P688,Q23437905)
action filter_type
action find_reverse
entity Q23437905
relation P688
type Q863908
The nucleic acid sequence that is encoded by trimethylamine N-oxide ( TMAO ) reductase I , catalytic subunit VF_A0299 is named trimethylamine N-oxide (TMAO) reductase I, catalytic subunit VF A0299
[{'concept': 'Q863908'}, 'P688', 'Q23437905']
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:Q863908 . ?i property:P688 resource:Q23437905 }
trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
The nucleic acid sequence that is encoded by trimethylamine N-oxide ( TMAO ) reductase I , catalytic subunit VF_A0299 is named trimethylamine N-oxide (TMAO) reductase I, catalytic subunit VF A0299
trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
action filter_type
action find_reverse
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299']
SELECT DISTINCT ?i WHERE { ?i rdf:type ontology:nucleic_acid_sequence . ?i property:encodes resource:trimethylamine_N-oxide_(TMAO)_reductase_I,_catalytic_subunit____VF_A0299 }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23152148
P703
Q631147
USER
What is the taxon to which that nucleic acid sequence belongs to ?
(Q23152148,P703,c(Q631147))
action filter_type
action find
entity Q23152148
relation P703
type Q631147
['Q23152148', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?x WHERE { resource:Q23152148 property:P703 ?x . ?x rdf:type ontology:Q631147 }
trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
action filter_type
action find
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
relation found in taxon
type infraspecific name
['trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?x WHERE { resource:trimethylamine_N-oxide_(TMAO)_reductase_I,_catalytic_subunit____VF_A0299 property:found_in_taxon ?x . ?x rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102946
SYSTEM
Vibrio fischeri ES114
Q21102946
(Q23152148,P703,c(Q631147))
action filter_type
action find
entity Q23152148
relation P703
type Q631147
[ANSWER]
['Q23152148', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?x WHERE { resource:Q23152148 property:P703 ?x . ?x rdf:type ontology:Q631147 }
Vibrio fischeri ES114
Vibrio fischeri ES114
Vibrio fischeri ES114
action filter_type
action find
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
relation found in taxon
type infraspecific name
['trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?x WHERE { resource:trimethylamine_N-oxide_(TMAO)_reductase_I,_catalytic_subunit____VF_A0299 property:found_in_taxon ?x . ?x rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Intersection|Single_Relation|Incomplete
Q23149932 Q23152148
P703
Q631147
USER
And also CAAX amino protease    VF_A0131
AND((Q23152148,P703,c(Q631147)), (Q23149932,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23152148
relation P703
action find
entity Q23149932
relation P703
type Q631147
{'AND': [['Q23152148', 'P703', {'concept': 'Q631147'}], ['Q23149932', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?i WHERE { resource:Q23152148 property:P703 ?i . resource:Q23149932 property:P703 ?i . ?i rdf:type ontology:Q631147 }
CAAX amino protease    VF_A0131 trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
action filter_type
action intersection
action find
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
relation found in taxon
action find
entity CAAX amino protease    VF_A0131
relation found in taxon
type infraspecific name
{'AND': [['trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299', 'found in taxon', {'concept': 'infraspecific name'}], ['CAAX amino protease    VF_A0131', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?i WHERE { resource:trimethylamine_N-oxide_(TMAO)_reductase_I,_catalytic_subunit____VF_A0299 property:found_in_taxon ?i . resource:CAAX_amino_protease____VF_A0131 property:found_in_taxon ?i . ?i rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102946
SYSTEM
Vibrio fischeri ES114
Q21102946
AND((Q23152148,P703,c(Q631147)), (Q23149932,P703,c(Q631147)))
action filter_type
action intersection
action find
entity Q23152148
relation P703
action find
entity Q23149932
relation P703
type Q631147
[ANSWER]
{'AND': [['Q23152148', 'P703', {'concept': 'Q631147'}], ['Q23149932', 'P703', {'concept': 'Q631147'}]]}
SELECT DISTINCT ?i WHERE { resource:Q23152148 property:P703 ?i . resource:Q23149932 property:P703 ?i . ?i rdf:type ontology:Q631147 }
Vibrio fischeri ES114
Vibrio fischeri ES114
action filter_type
action intersection
action find
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299
relation found in taxon
action find
entity CAAX amino protease    VF_A0131
relation found in taxon
type infraspecific name
{'AND': [['trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    VF_A0299', 'found in taxon', {'concept': 'infraspecific name'}], ['CAAX amino protease    VF_A0131', 'found in taxon', {'concept': 'infraspecific name'}]]}
SELECT DISTINCT ?i WHERE { resource:trimethylamine_N-oxide_(TMAO)_reductase_I,_catalytic_subunit____VF_A0299 property:found_in_taxon ?i . resource:CAAX_amino_protease____VF_A0131 property:found_in_taxon ?i . ?i rdf:type ontology:infraspecific_name }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q23149932
P702
Q181394
USER
Which nutrient is encoded by CAAX amino protease    VF_A0131 ?
(c(Q181394),P702,Q21102946)
action filter_type
action find_reverse
entity Q23149932
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q21102946']
SELECT DISTINCT ?s WHERE { ?s property:P702 resource:Q23149932 . ?s rdf:type ontology:Q181394 }
CAAX amino protease    VF_A0131
action filter_type
action find_reverse
entity CAAX amino protease    VF_A0131
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Vibrio fischeri ES114']
SELECT DISTINCT ?s WHERE { ?s property:encoded_by resource:CAAX_amino_protease____VF_A0131 . ?s rdf:type ontology:nutrient }
[]
nutrient
Q23437213
SYSTEM
CAAX amino protease    VF_A0131
Q23437213
(c(Q181394),P702,Q21102946)
action filter_type
action find_reverse
entity Q23149932
relation P702
type Q181394
Is CAAX amino protease VF A0131 is encoded by CAAX amino protease VF_A0131
[{'concept': 'Q181394'}, 'P702', 'Q21102946']
SELECT DISTINCT ?s WHERE { ?s property:P702 resource:Q23149932 . ?s rdf:type ontology:Q181394 }
CAAX amino protease    VF_A0131
Is CAAX amino protease VF A0131 is encoded by CAAX amino protease VF_A0131
CAAX amino protease    VF_A0131
action filter_type
action find_reverse
entity CAAX amino protease    VF_A0131
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'Vibrio fischeri ES114']
SELECT DISTINCT ?s WHERE { ?s property:encoded_by resource:CAAX_amino_protease____VF_A0131 . ?s rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q23437213 Q27544817
P702
Q863908
USER
Is putative glucokinase YDR516C the gene that encodes CAAX amino protease    VF_A0131 ?
(Q23437213,P702,Q27544817)
action is_in
entity Q27544817
action find
entity Q23437213
relation P702
['Q23437213', 'P702', 'Q27544817']
ASK WHERE { resource:Q23437213 property:P702 resource:Q27544817 }
CAAX amino protease    VF_A0131 putative glucokinase YDR516C
action is_in
entity putative glucokinase YDR516C
action find
entity CAAX amino protease    VF_A0131
relation encoded by
['CAAX amino protease    VF_A0131', 'encoded by', 'putative glucokinase YDR516C']
ASK WHERE { resource:CAAX_amino_protease____VF_A0131 property:encoded_by resource:putative_glucokinase_YDR516C }
[]
nucleic acid sequence
SYSTEM
NO
(Q23437213,P702,Q27544817)
action is_in
entity Q27544817
action find
entity Q23437213
relation P702
[ANSWER]
['Q23437213', 'P702', 'Q27544817']
ASK WHERE { resource:Q23437213 property:P702 resource:Q27544817 }
No
action is_in
entity putative glucokinase YDR516C
action find
entity CAAX amino protease    VF_A0131
relation encoded by
['CAAX amino protease    VF_A0131', 'encoded by', 'putative glucokinase YDR516C']
ASK WHERE { resource:CAAX_amino_protease____VF_A0131 property:encoded_by resource:putative_glucokinase_YDR516C }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q21102931 Q14916240
P703 P680
Q181394
USER
Which nutrients are the gene that have molybdenum ion binding as the molecular function and are a part of the taxon Escherichia coli UMN026 ?
AND((c(Q181394),P680,Q14916240), (c(Q181394),P703,Q21102931))
action filter_type
action intersection
action find_reverse
entity Q14916240
relation P680
action find_reverse
entity Q21102931
relation P703
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P680', 'Q14916240'], [{'concept': 'Q181394'}, 'P703', 'Q21102931']]}
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q181394 . ?p property:P680 resource:Q14916240 . ?p property:P703 resource:Q21102931 }
Escherichia coli UMN026 molybdenum ion binding
action filter_type
action intersection
action find_reverse
entity molybdenum ion binding
relation molecular function
action find_reverse
entity Escherichia coli UMN026
relation found in taxon
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'molecular function', 'molybdenum ion binding'], [{'concept': 'nutrient'}, 'found in taxon', 'Escherichia coli UMN026']]}
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:nutrient . ?p property:molecular_function resource:molybdenum_ion_binding . ?p property:found_in_taxon resource:Escherichia_coli_UMN026 }
[]
nutrient
Q24146559 Q24147580 Q24147894 Q24147398 Q24150400 Q24148230 Q24148108 Q24146449 Q24148652
SYSTEM
NADH dehydrogenase subunit G    ECUMN_2622, nitrate reductase 1 subunit alpha    ECUMN_1523, nitrate reductase catalytic subunit    ECUMN_2541, trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179, putative oxidoreductase    ECUMN_1755, formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727, putative molybdenum-pterin-binding-protein    ECUMN_3055, nitrate reductase 2 subunit alpha    ECUMN_1721, putative 2Fe-2S cluster-containing protein    ECUMN_1136
Q24146559 Q24147580 Q24147894 Q24147398 Q24150400 Q24148230 Q24148108 Q24146449 Q24148652
AND((c(Q181394),P680,Q14916240), (c(Q181394),P703,Q21102931))
action filter_type
action intersection
action find_reverse
entity Q14916240
relation P680
action find_reverse
entity Q21102931
relation P703
type Q181394
[ANSWERS]
{'AND': [[{'concept': 'Q181394'}, 'P680', 'Q14916240'], [{'concept': 'Q181394'}, 'P703', 'Q21102931']]}
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:Q181394 . ?p property:P680 resource:Q14916240 . ?p property:P703 resource:Q21102931 }
NADH dehydrogenase subunit G    ECUMN_2622 nitrate reductase 1 subunit alpha    ECUMN_1523 nitrate reductase catalytic subunit    ECUMN_2541 trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179 putative oxidoreductase    ECUMN_1755 formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727 putative molybdenum-pterin-binding-protein    ECUMN_3055 nitrate reductase 2 subunit alpha    ECUMN_1721 putative 2Fe-2S cluster-containing protein    ECUMN_1136
Putative molybdenum-pterin-binding-protein ECUMN 3055, nitrate reductase 2 subunit alpha ECUMN 1721 and putative 2Fe-2S cluster-containing protein ECUMN 1136 are the gene that have molybdenum ion binding as the molecular function and are a part of the taxon Escherichia coli UMN026
NADH dehydrogenase subunit G    ECUMN_2622 nitrate reductase 1 subunit alpha    ECUMN_1523 nitrate reductase catalytic subunit    ECUMN_2541 trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179 putative oxidoreductase    ECUMN_1755 formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727 putative molybdenum-pterin-binding-protein    ECUMN_3055 nitrate reductase 2 subunit alpha    ECUMN_1721 putative 2Fe-2S cluster-containing protein    ECUMN_1136
action filter_type
action intersection
action find_reverse
entity molybdenum ion binding
relation molecular function
action find_reverse
entity Escherichia coli UMN026
relation found in taxon
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'molecular function', 'molybdenum ion binding'], [{'concept': 'nutrient'}, 'found in taxon', 'Escherichia coli UMN026']]}
SELECT DISTINCT ?p WHERE { ?p rdf:type ontology:nutrient . ?p property:molecular_function resource:molybdenum_ion_binding . ?p property:found_in_taxon resource:Escherichia_coli_UMN026 }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q24146559 Q24147580 Q24147894 Q24147398 Q24150400 Q24148230 Q24148108 Q24146449 Q24148652
P688
Q863908
USER
Which nucleic acid sequences encodes NADH dehydrogenase subunit G    ECUMN_2622, nitrate reductase 1 subunit alpha    ECUMN_1523, nitrate reductase catalytic subunit    ECUMN_2541, trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179, putative oxidoreductase    ECUMN_1755, formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727, putative molybdenum-pterin-binding-protein    ECUMN_3055, nitrate reductase 2 subunit alpha    ECUMN_1721 and putative 2Fe-2S cluster-containing protein    ECUMN_1136 ?
(c(Q863908),P688,Q24146559) (c(Q863908),P688,Q24147580) (c(Q863908),P688,Q24147894) (c(Q863908),P688,Q24147398) (c(Q863908),P688,Q24150400) (c(Q863908),P688,Q24148230) (c(Q863908),P688,Q24148108) (c(Q863908),P688,Q24146449) (c(Q863908),P688,Q24148652)
action union
action filter_type
action find_reverse
entity Q24146559
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24147580
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24147894
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24147398
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24150400
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24148230
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24148108
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24146449
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24148652
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q24146559'] [{'concept': 'Q863908'}, 'P688', 'Q24147580'] [{'concept': 'Q863908'}, 'P688', 'Q24147894'] [{'concept': 'Q863908'}, 'P688', 'Q24147398'] [{'concept': 'Q863908'}, 'P688', 'Q24150400'] [{'concept': 'Q863908'}, 'P688', 'Q24148230'] [{'concept': 'Q863908'}, 'P688', 'Q24148108'] [{'concept': 'Q863908'}, 'P688', 'Q24146449'] [{'concept': 'Q863908'}, 'P688', 'Q24148652']
SELECT DISTINCT ?a WHERE { { ?a rdf:type ontology:Q863908 . ?a property:P688 resource:Q24146559 } UNION { ?a rdf:type ontology:Q863908 . ?a property:P688 resource:Q24147580 } }
NADH dehydrogenase subunit G    ECUMN_2622 nitrate reductase 1 subunit alpha    ECUMN_1523 nitrate reductase catalytic subunit    ECUMN_2541 trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179 putative oxidoreductase    ECUMN_1755 formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727 putative molybdenum-pterin-binding-protein    ECUMN_3055 nitrate reductase 2 subunit alpha    ECUMN_1721 putative 2Fe-2S cluster-containing protein    ECUMN_1136
action union
action filter_type
action find_reverse
entity NADH dehydrogenase subunit G    ECUMN_2622
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity nitrate reductase 1 subunit alpha    ECUMN_1523
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity nitrate reductase catalytic subunit    ECUMN_2541
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity putative oxidoreductase    ECUMN_1755
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity putative molybdenum-pterin-binding-protein    ECUMN_3055
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity nitrate reductase 2 subunit alpha    ECUMN_1721
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity putative 2Fe-2S cluster-containing protein    ECUMN_1136
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'NADH dehydrogenase subunit G    ECUMN_2622'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'nitrate reductase 1 subunit alpha    ECUMN_1523'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'nitrate reductase catalytic subunit    ECUMN_2541'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative oxidoreductase    ECUMN_1755'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative molybdenum-pterin-binding-protein    ECUMN_3055'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'nitrate reductase 2 subunit alpha    ECUMN_1721'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative 2Fe-2S cluster-containing protein    ECUMN_1136']
SELECT DISTINCT ?a WHERE { { ?a rdf:type ontology:nucleic_acid_sequence . ?a property:encodes resource:NADH_dehydrogenase_subunit_G____ECUMN_2622 } UNION { ?a rdf:type ontology:nucleic_acid_sequence . ?a property:encodes resource:nitrate_reductase_1_subunit_alpha____ECUMN_1523 } }
[]
nucleic acid sequence
Q23140637 Q23143259 Q23144321
SYSTEM
NADH dehydrogenase subunit G    ECUMN_2622, nitrate reductase 1 subunit alpha    ECUMN_1523, nitrate reductase catalytic subunit    ECUMN_2541
Q23140637 Q23143259 Q23144321 Q23142572 Q23152143 Q23145209 Q23144915 Q23140374 Q23146157
(c(Q863908),P688,Q24146559) (c(Q863908),P688,Q24147580) (c(Q863908),P688,Q24147894) (c(Q863908),P688,Q24147398) (c(Q863908),P688,Q24150400) (c(Q863908),P688,Q24148230) (c(Q863908),P688,Q24148108) (c(Q863908),P688,Q24146449) (c(Q863908),P688,Q24148652)
action union
action filter_type
action find_reverse
entity Q24146559
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24147580
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24147894
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24147398
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24150400
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24148230
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24148108
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24146449
relation P688
type Q863908
action filter_type
action find_reverse
entity Q24148652
relation P688
type Q863908
[ANSWERS]
[{'concept': 'Q863908'}, 'P688', 'Q24146559'] [{'concept': 'Q863908'}, 'P688', 'Q24147580'] [{'concept': 'Q863908'}, 'P688', 'Q24147894'] [{'concept': 'Q863908'}, 'P688', 'Q24147398'] [{'concept': 'Q863908'}, 'P688', 'Q24150400'] [{'concept': 'Q863908'}, 'P688', 'Q24148230'] [{'concept': 'Q863908'}, 'P688', 'Q24148108'] [{'concept': 'Q863908'}, 'P688', 'Q24146449'] [{'concept': 'Q863908'}, 'P688', 'Q24148652']
SELECT DISTINCT ?a WHERE { { ?a rdf:type ontology:Q863908 . ?a property:P688 resource:Q24146559 } UNION { ?a rdf:type ontology:Q863908 . ?a property:P688 resource:Q24147580 } }
NADH dehydrogenase subunit G    ECUMN_2622 nitrate reductase 1 subunit alpha    ECUMN_1523 nitrate reductase catalytic subunit    ECUMN_2541 trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179 putative oxidoreductase    ECUMN_1755 formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727 putative molybdenum-pterin-binding-protein    ECUMN_3055 nitrate reductase 2 subunit alpha    ECUMN_1721 putative 2Fe-2S cluster-containing protein    ECUMN_1136
NADH dehydrogenase subunit G    ECUMN_2622 nitrate reductase 1 subunit alpha    ECUMN_1523 nitrate reductase catalytic subunit    ECUMN_2541
action union
action filter_type
action find_reverse
entity NADH dehydrogenase subunit G    ECUMN_2622
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity nitrate reductase 1 subunit alpha    ECUMN_1523
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity nitrate reductase catalytic subunit    ECUMN_2541
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity putative oxidoreductase    ECUMN_1755
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity putative molybdenum-pterin-binding-protein    ECUMN_3055
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity nitrate reductase 2 subunit alpha    ECUMN_1721
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity putative 2Fe-2S cluster-containing protein    ECUMN_1136
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'NADH dehydrogenase subunit G    ECUMN_2622'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'nitrate reductase 1 subunit alpha    ECUMN_1523'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'nitrate reductase catalytic subunit    ECUMN_2541'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'trimethylamine N-oxide (TMAO) reductase I, catalytic subunit    ECUMN_1179'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative oxidoreductase    ECUMN_1755'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'formate dehydrogenase-N subunit alpha, nitrate-inducible    ECUMN_1727'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative molybdenum-pterin-binding-protein    ECUMN_3055'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'nitrate reductase 2 subunit alpha    ECUMN_1721'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'putative 2Fe-2S cluster-containing protein    ECUMN_1136']
SELECT DISTINCT ?a WHERE { { ?a rdf:type ontology:nucleic_acid_sequence . ?a property:encodes resource:NADH_dehydrogenase_subunit_G____ECUMN_2622 } UNION { ?a rdf:type ontology:nucleic_acid_sequence . ?a property:encodes resource:nitrate_reductase_1_subunit_alpha____ECUMN_1523 } }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q24146559
P681
Q15989253
USER
What is a component of NADH dehydrogenase subunit G    ECUMN_2622 ?
(Q24146559,P681,c(Q15989253))
action filter_type
action find
entity Q24146559
relation P681
type Q15989253
['Q24146559', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q15989253 . resource:Q24146559 property:P681 ?c }
NADH dehydrogenase subunit G    ECUMN_2622
action filter_type
action find
entity NADH dehydrogenase subunit G    ECUMN_2622
relation cell component
type part
['NADH dehydrogenase subunit G    ECUMN_2622', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:part . resource:NADH_dehydrogenase_subunit_G____ECUMN_2622 property:cell_component ?c }
[]
part
Q14349455
SYSTEM
membrane
Q14349455
(Q24146559,P681,c(Q15989253))
action filter_type
action find
entity Q24146559
relation P681
type Q15989253
A component of NADH dehydrogenase subunit G ECUMN_2622 is a [ANSWER]
['Q24146559', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:Q15989253 . resource:Q24146559 property:P681 ?c }
membrane
A component of NADH dehydrogenase subunit G ECUMN_2622 is a membrane
membrane
action filter_type
action find
entity NADH dehydrogenase subunit G    ECUMN_2622
relation cell component
type part
['NADH dehydrogenase subunit G    ECUMN_2622', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?c WHERE { ?c rdf:type ontology:part . resource:NADH_dehydrogenase_subunit_G____ECUMN_2622 property:cell_component ?c }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Single entity type
Q23140637
P688
Q181394
USER
How many nutrients are encoded by NADH dehydrogenase subunit G    ECUMN_2622 ?
(Q23140637,P688,c(Q181394))
action count
action filter_type
action find
entity Q23140637
relation P688
type Q181394
['Q23140637', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?k ) WHERE { resource:Q23140637 property:P688 ?y . ?y rdf:type ontology:Q181394 }
NADH dehydrogenase subunit G    ECUMN_2622
action count
action filter_type
action find
entity NADH dehydrogenase subunit G    ECUMN_2622
relation encodes
type nutrient
['NADH dehydrogenase subunit G    ECUMN_2622', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?k ) WHERE { resource:NADH_dehydrogenase_subunit_G____ECUMN_2622 property:encodes ?y . ?y rdf:type ontology:nutrient }
[]
nutrient
SYSTEM
1
Q24146559
(Q23140637,P688,c(Q181394))
action count
action filter_type
action find
entity Q23140637
relation P688
type Q181394
[ANSWER]
['Q23140637', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?k ) WHERE { resource:Q23140637 property:P688 ?y . ?y rdf:type ontology:Q181394 }
NADH dehydrogenase subunit G    ECUMN_2622
1
action count
action filter_type
action find
entity NADH dehydrogenase subunit G    ECUMN_2622
relation encodes
type nutrient
['NADH dehydrogenase subunit G    ECUMN_2622', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?y ) AS ?k ) WHERE { resource:NADH_dehydrogenase_subunit_G____ECUMN_2622 property:encodes ?y . ?y rdf:type ontology:nutrient }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23175245
Q181394
USER
And how about malate:quinone oxidoreductase    SAOUHSC_02927?
(Q23175245,P688,c(Q181394))
action filter_type
action find
entity Q23175245
relation P688
type Q181394
['Q23175245', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?h WHERE { resource:Q23175245 property:P688 ?h . ?h rdf:type ontology:Q181394 }
malate:quinone oxidoreductase    SAOUHSC_02927
action filter_type
action find
entity malate:quinone oxidoreductase    SAOUHSC_02927
relation encodes
type nutrient
['malate:quinone oxidoreductase    SAOUHSC_02927', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?h WHERE { resource:malate:quinone_oxidoreductase____SAOUHSC_02927 property:encodes ?h . ?h rdf:type ontology:nutrient }
[]
nutrient
Q23479400
SYSTEM
malate:quinone oxidoreductase    SAOUHSC_02927
Q23479400
(Q23175245,P688,c(Q181394))
action filter_type
action find
entity Q23175245
relation P688
type Q181394
[ANSWER]
['Q23175245', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?h WHERE { resource:Q23175245 property:P688 ?h . ?h rdf:type ontology:Q181394 }
malate:quinone oxidoreductase    SAOUHSC_02927
malate:quinone oxidoreductase    SAOUHSC_02927
action filter_type
action find
entity malate:quinone oxidoreductase    SAOUHSC_02927
relation encodes
type nutrient
['malate:quinone oxidoreductase    SAOUHSC_02927', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?h WHERE { resource:malate:quinone_oxidoreductase____SAOUHSC_02927 property:encodes ?h . ?h rdf:type ontology:nutrient }
[]