Simple Question (Direct)
Simple Question
Q27761368
P703
Q16521
USER
Where is phosphopyruvate hydratase    Mfl468 found ?
(Q27761368,P703,c(Q16521))
action filter_type
action find
entity Q27761368
relation P703
type Q16521
['Q27761368', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?p WHERE { resource:Q27761368 property:P703 ?p . ?p rdf:type ontology:Q16521 }
phosphopyruvate hydratase    Mfl468
action filter_type
action find
entity phosphopyruvate hydratase    Mfl468
relation found in taxon
type taxon
['phosphopyruvate hydratase    Mfl468', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?p WHERE { resource:phosphopyruvate_hydratase____Mfl468 property:found_in_taxon ?p . ?p rdf:type ontology:taxon }
[]
taxon
Q21398170
SYSTEM
Mesoplasma florum L1
Q21398170
(Q27761368,P703,c(Q16521))
action filter_type
action find
entity Q27761368
relation P703
type Q16521
Phosphopyruvate hydratase Mfl468 is found in [ANSWER]
['Q27761368', 'P703', {'concept': 'Q16521'}]
SELECT DISTINCT ?p WHERE { resource:Q27761368 property:P703 ?p . ?p rdf:type ontology:Q16521 }
Mesoplasma florum L1
Phosphopyruvate hydratase Mfl468 is found in Mesoplasma florum L1
Mesoplasma florum L1
action filter_type
action find
entity phosphopyruvate hydratase    Mfl468
relation found in taxon
type taxon
['phosphopyruvate hydratase    Mfl468', 'found in taxon', {'concept': 'taxon'}]
SELECT DISTINCT ?p WHERE { resource:phosphopyruvate_hydratase____Mfl468 property:found_in_taxon ?p . ?p rdf:type ontology:taxon }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q27761368
P680
Q44424
USER
Which chemical bonds represent molecular function of that nutrient ?
(Q21398170,P680,c(Q44424))
action filter_type
action find
entity Q27761368
relation P680
type Q44424
['Q21398170', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?n WHERE { resource:Q27761368 property:P680 ?n . ?n rdf:type ontology:Q44424 }
phosphopyruvate hydratase    Mfl468
action filter_type
action find
entity phosphopyruvate hydratase    Mfl468
relation molecular function
type chemical bond
['Mesoplasma florum L1', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?n WHERE { resource:phosphopyruvate_hydratase____Mfl468 property:molecular_function ?n . ?n rdf:type ontology:chemical_bond }
[]
chemical bond
Q13667380 Q14860850
SYSTEM
metal ion binding, magnesium ion binding
Q13667380 Q14860850
(Q21398170,P680,c(Q44424))
action filter_type
action find
entity Q27761368
relation P680
type Q44424
[ANSWERS] represent molecular function of that nutrient
['Q21398170', 'P680', {'concept': 'Q44424'}]
SELECT DISTINCT ?n WHERE { resource:Q27761368 property:P680 ?n . ?n rdf:type ontology:Q44424 }
metal ion binding magnesium ion binding
Metal ion binding and magnesium ion binding represent molecular function of that nutrient
metal ion binding magnesium ion binding
action filter_type
action find
entity phosphopyruvate hydratase    Mfl468
relation molecular function
type chemical bond
['Mesoplasma florum L1', 'molecular function', {'concept': 'chemical bond'}]
SELECT DISTINCT ?n WHERE { resource:phosphopyruvate_hydratase____Mfl468 property:molecular_function ?n . ?n rdf:type ontology:chemical_bond }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27761368
P681
Q15989253
USER
Which parts are components of phosphopyruvate hydratase    Mfl468 ?
(Q27761368,P681,c(Q15989253))
action filter_type
action find
entity Q27761368
relation P681
type Q15989253
['Q27761368', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q15989253 . resource:Q27761368 property:P681 ?u }
phosphopyruvate hydratase    Mfl468
action filter_type
action find
entity phosphopyruvate hydratase    Mfl468
relation cell component
type part
['phosphopyruvate hydratase    Mfl468', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:part . resource:phosphopyruvate_hydratase____Mfl468 property:cell_component ?u }
[]
part
Q79899 Q14645596
SYSTEM
cytoplasm, extracellular region
Q79899 Q14645596
(Q27761368,P681,c(Q15989253))
action filter_type
action find
entity Q27761368
relation P681
type Q15989253
[ANSWERS] are components of phosphopyruvate hydratase Mfl468
['Q27761368', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:Q15989253 . resource:Q27761368 property:P681 ?u }
cytoplasm extracellular region
Cytoplasm and extracellular region are components of phosphopyruvate hydratase Mfl468
cytoplasm extracellular region
action filter_type
action find
entity phosphopyruvate hydratase    Mfl468
relation cell component
type part
['phosphopyruvate hydratase    Mfl468', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?u WHERE { ?u rdf:type ontology:part . resource:phosphopyruvate_hydratase____Mfl468 property:cell_component ?u }
[]
Simple Question (Ellipsis)
Incomplete|object parent is changed, subject and predicate remain same
Q27761368
Q5058355
USER
And which cellular component?
(Q27761368,P681,c(Q5058355))
action filter_type
action find
entity Q27761368
relation P681
type Q5058355
['Q27761368', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?q WHERE { resource:Q27761368 property:P681 ?q . ?q rdf:type ontology:Q5058355 }
phosphopyruvate hydratase    Mfl468
action filter_type
action find
entity phosphopyruvate hydratase    Mfl468
relation cell component
type cellular component
['phosphopyruvate hydratase    Mfl468', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?q WHERE { resource:phosphopyruvate_hydratase____Mfl468 property:cell_component ?q . ?q rdf:type ontology:cellular_component }
[]
cellular component
Q189094
SYSTEM
cell surface
Q189094
(Q27761368,P681,c(Q5058355))
action filter_type
action find
entity Q27761368
relation P681
type Q5058355
[ANSWER]
['Q27761368', 'P681', {'concept': 'Q5058355'}]
SELECT DISTINCT ?q WHERE { resource:Q27761368 property:P681 ?q . ?q rdf:type ontology:Q5058355 }
cell surface
cell surface
action filter_type
action find
entity phosphopyruvate hydratase    Mfl468
relation cell component
type cellular component
['phosphopyruvate hydratase    Mfl468', 'cell component', {'concept': 'cellular component'}]
SELECT DISTINCT ?q WHERE { resource:phosphopyruvate_hydratase____Mfl468 property:cell_component ?q . ?q rdf:type ontology:cellular_component }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count over Atleast/ Atmost/ Approx. the same/Equal|Mult. entity type
P361
Q15989253 Q15989253 Q5058355
USER
How many parts are around 4 parts or cellular components a part of ?
(c(Q15989253)|c(Q5058355),P361,c(Q15989253))
action count
action approx
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q15989253
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
value 4
[[{'concept': 'Q15989253'}, {'concept': 'Q5058355'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?h ) WHERE { { SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) ?a WHERE { ?b rdf:type ?v . VALUES ( ?v ) { ( ontology:Q15989253 ) ( ontology:Q5058355 ) } } GROUP BY ?a } . FILTER ( ?j = 4 ) }
action count
action approx
action union
action find_reverse_tuple_counts
relation part of
type part
type part
action find_reverse_tuple_counts
relation part of
type part
type cellular component
value 4
[[{'concept': 'part'}, {'concept': 'cellular component'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?h ) WHERE { { SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) ?a WHERE { ?b rdf:type ?v . VALUES ( ?v ) { ( ontology:part ) ( ontology:cellular_component ) } } GROUP BY ?a } . FILTER ( ?j = 4 ) }
[]
part part cellular component
SYSTEM
66
Q24787617 Q14349455 Q24724839 Q24719950 Q24773317 Q24781994 Q24773030 Q24781122 Q24724794 Q24784050 Q24722080 Q24725230 Q24776171 Q24727168 Q24738774 Q24773003 Q24769143 Q24784176 Q24775380 Q24788323 Q24741257 Q24785866 Q187181 Q24724841 Q24773738 Q24767877 Q24787484 Q24778236 Q24725166 Q24726113 Q24725133 Q24786351 Q24777173 Q24785163 Q24721427 Q24774984 Q24773139 Q24769639 Q24772708 Q24723641 Q24781925 Q24740393 Q24772015 Q24783329 Q24724527 Q24774689 Q24781248 Q24773027 Q24779606 Q24783253 Q45948 Q24777474 Q24724550 Q14645596 Q24723098 Q24739241 Q24787067 Q24772130 Q24775084 Q24769753 Q24778327 Q24788276 Q24777282 Q24722272 Q24773669 Q24776889
(c(Q15989253)|c(Q5058355),P361,c(Q15989253))
action count
action approx
action union
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q15989253
action find_reverse_tuple_counts
relation P361
type Q15989253
type Q5058355
value 4
[ANSWER]
[[{'concept': 'Q15989253'}, {'concept': 'Q5058355'}], 'P361', {'concept': 'Q15989253'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?h ) WHERE { { SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) ?a WHERE { ?b rdf:type ?v . VALUES ( ?v ) { ( ontology:Q15989253 ) ( ontology:Q5058355 ) } } GROUP BY ?a } . FILTER ( ?j = 4 ) }
Alkaline-phosphatase-like, core domain membrane DNA-directed DNA polymerase X Zinc finger, FYVE/PHD-type Polycystin cation channel Aminoacyl-tRNA synthetase, class II L-Aspartase-like Polyketide synthase, enoylreductase domain Cytidine deaminase-like Pyruvate-flavodoxin oxidoreductase, central domain FAD-linked oxidase-like, C-terminal Pseudouridine synthase, catalytic domain Ribosomal protein L19/L19e Ubiquinol-cytochrome c reductase, iron-sulphur subunit Copper amine oxidase, N-terminal Transcription initiation factor IIE subunit alpha, N-terminal TRAF-like SPOC-like, C-terminal domain Pullulanase, type I PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Alanyl-tRNA synthetase, class IIc, core domain Band 4.1 domain synapse DNA ligase D Cadherin-like Formiminotransferase catalytic domain Aspartic peptidase domain Nitrite reductase [NAD(P)H] large subunit, NirB Small GTP-binding protein domain Lipid transport protein, N-terminal Polyketide synthase, beta-ketoacyl synthase domain RuvA domain 2-like Transcription termination factor NusA Zinc finger C2H2-type/integrase DNA-binding domain Biotin carboxylation domain Methyl-coenzyme M reductase, ferredoxin-like fold Rossmann-like alpha/beta/alpha sandwich fold Homeodomain-like ABC transporter-like Saposin-like Alpha-1,6-glucosidases, pullulanase-type S-adenosylmethionine synthetase superfamily Cupredoxin DNA topoisomerase, type IA, central Tetratricopeptide-like helical domain Virus, major capsid protein, C-terminal Pyridoxal phosphate-dependent transferase Nucleic acid-binding, OB-fold NAD-dependent DNA ligase, N-terminal Immunoglobulin-like domain organelle RmlC-like jelly roll fold DNA breaking-rejoining enzyme, catalytic core extracellular region Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CheY-like superfamily Viral capsid/haemagglutinin protein MIF4G-like domain DNA primase, DnaG DNA topoisomerase I, eukaryotic-type RNA polymerase sigma factor, region 2 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RNA polymerase sigma factor RpoD, C-terminal Flavivirus  glycoprotein central and dimerisation domain Translation protein SH3-like domain Prismane-like
66
action count
action approx
action union
action find_reverse_tuple_counts
relation part of
type part
type part
action find_reverse_tuple_counts
relation part of
type part
type cellular component
value 4
[[{'concept': 'part'}, {'concept': 'cellular component'}], 'part of', {'concept': 'part'}]
SELECT DISTINCT ( COUNT ( ?a ) AS ?h ) WHERE { { SELECT DISTINCT ( COUNT ( ?b ) AS ?j ) ?a WHERE { ?b rdf:type ?v . VALUES ( ?v ) { ( ontology:part ) ( ontology:cellular_component ) } } GROUP BY ?a } . FILTER ( ?j = 4 ) }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q21158538
Q5058355
USER
And what about plasma membrane protein complex?
(Q21158538,P361,c(Q5058355))
action filter_type
action find
entity Q21158538
relation P361
type Q5058355
['Q21158538', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?r WHERE { resource:Q21158538 property:P361 ?r . ?r rdf:type ontology:Q5058355 }
plasma membrane protein complex
action filter_type
action find
entity plasma membrane protein complex
relation part of
type cellular component
['plasma membrane protein complex', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?r WHERE { resource:plasma_membrane_protein_complex property:part_of ?r . ?r rdf:type ontology:cellular_component }
[]
cellular component
Q29548
SYSTEM
plasma membrane
Q29548
(Q21158538,P361,c(Q5058355))
action filter_type
action find
entity Q21158538
relation P361
type Q5058355
[ANSWER]
['Q21158538', 'P361', {'concept': 'Q5058355'}]
SELECT DISTINCT ?r WHERE { resource:Q21158538 property:P361 ?r . ?r rdf:type ontology:Q5058355 }
plasma membrane
plasma membrane
action filter_type
action find
entity plasma membrane protein complex
relation part of
type cellular component
['plasma membrane protein complex', 'part of', {'concept': 'cellular component'}]
SELECT DISTINCT ?r WHERE { resource:plasma_membrane_protein_complex property:part_of ?r . ?r rdf:type ontology:cellular_component }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q79899 Q21398170
P703 P681
Q181394
USER
Which nutrients are found in the taxon Mesoplasma florum L1 and have cytoplasm as their cell component ?
AND((c(Q181394),P703,Q21398170), (c(Q181394),P681,Q79899))
action filter_type
action intersection
action find_reverse
entity Q21398170
relation P703
action find_reverse
entity Q79899
relation P681
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P703', 'Q21398170'], [{'concept': 'Q181394'}, 'P681', 'Q79899']]}
SELECT DISTINCT ?u WHERE { ?u property:P703 resource:Q21398170 . ?u property:P681 resource:Q79899 . ?u rdf:type ontology:Q181394 }
cytoplasm Mesoplasma florum L1
action filter_type
action intersection
action find_reverse
entity Mesoplasma florum L1
relation found in taxon
action find_reverse
entity cytoplasm
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'found in taxon', 'Mesoplasma florum L1'], [{'concept': 'nutrient'}, 'cell component', 'cytoplasm']]}
SELECT DISTINCT ?u WHERE { ?u property:found_in_taxon resource:Mesoplasma_florum_L1 . ?u property:cell_component resource:cytoplasm . ?u rdf:type ontology:nutrient }
[]
nutrient
Q27761238 Q27761015 Q27761551 Q27761524 Q27761177 Q27760945 Q27761021 Q27761316 Q27761149 Q27760870
SYSTEM
Some of them are tRNA modification GTPase TrmE    Mfl014, chromosome replication initiator DnaA    Mfl001, tRNA-specific 2-thiouridylase MnmA    Mfl412, isoleucyl-tRNA synthetase    Mfl389, leucyl-tRNA synthetase    Mfl490, threonyl-tRNA synthetase    Mfl177, hsp33 redox-regulated chaperone    Mfl018, adenylate kinase    Mfl144, preprotein translocase subunit SecA    Mfl057, class III heat shock DNA-binding ATP dependent Lon protease    Mfl404
Q27761179 Q27761070 Q27761172 Q27761177 Q27761583 Q27760852 Q27760854 Q27761267 Q27761189 Q27761109 Q27761457 Q27761455 Q27761450 Q27761103 Q27760888 Q27761274 Q27761509 Q27761375 Q27761466 Q27761016 Q27761400 Q27761014 Q27761015 Q27761391 Q27761159 Q27761156 Q27761153 Q27761018 Q27761150 Q27761513 Q27760875 Q27760873 Q27760871 Q27760870 Q27761368 Q27761244 Q27761361 Q27761248 Q27761081 Q27761365 Q27761476 Q27761579 Q27761578 Q27761575 Q27761571 Q27761479 Q27761572 Q27761141 Q27761410 Q27761144 Q27761145 Q27761381 Q27761149 Q27761419 Q27760945 Q27760864 Q27760866 Q27761492 Q27761497 Q27761495 Q27761319 Q27761252 Q27761099 Q27761095 Q27761092 Q27761313 Q27761059 Q27761131 Q27761130 Q27761523 Q27761139 Q27761403 Q27761402 Q27761309 Q27761221 Q27761551 Q27761228 Q27761021 Q27761026 Q27761124 Q27761125 Q27761040 Q27761285 Q27761281 Q27761046 Q27761332 Q27761233 Q27761237 Q27761542 Q27760894 Q27761238 Q27760892 Q27761291 Q27761316 Q27761526 Q27761524 Q27761258 Q27761051 Q27761533 Q27761054 Q27761417 Q27760935 Q27761439 Q27761204 Q27761201 Q27761430 Q27761435 Q27760880 Q27761437 Q27760983 Q27761510 Q27761061 Q27761598 Q27760906 Q27761595 Q27761590 Q27761198 Q27761603 Q27761441 Q27761442
AND((c(Q181394),P703,Q21398170), (c(Q181394),P681,Q79899))
action filter_type
action intersection
action find_reverse
entity Q21398170
relation P703
action find_reverse
entity Q79899
relation P681
type Q181394
[ANSWERS]
{'AND': [[{'concept': 'Q181394'}, 'P703', 'Q21398170'], [{'concept': 'Q181394'}, 'P681', 'Q79899']]}
SELECT DISTINCT ?u WHERE { ?u property:P703 resource:Q21398170 . ?u property:P681 resource:Q79899 . ?u rdf:type ontology:Q181394 }
nucleotidyltransferase, primase    Mfl004 elongation factor Tu    Mfl621 asparaginyl-tRNA synthetase    Mfl480 leucyl-tRNA synthetase    Mfl490 signal recognition particle, cell division protein GTPase    Mfl237 GTP-binding protein Era    Mfl266 ribonuclease III, dsRNA-specific ribonuclease    Mfl231 guanylate kinase    Mfl195 trigger factor, prolyl isomerase    Mfl405 metallo-beta lactamase hydrolase    Mfl570 cytosol aminopeptidase    Mfl072 S-adenosyl-methyltransferase MraW    Mfl394 Holliday junction resolvase    Mfl464 thymidine kinase    Mfl635 valyl-tRNA synthetase    Mfl355 6-phosphofructokinase    Mfl174 peptidyl-tRNA hydrolase    Mfl077 elongation factor G    Mfl622 translation elongation factor P    Mfl407 arginyl-tRNA synthetase    Mfl554 hypothetical protein    Mfl291 NAD-dependent glycerol-3-phosphate dehydrogenase    Mfl200 chromosome replication initiator DnaA    Mfl001 uridine monophosphate kinase    Mfl556 uracil-DNA glycosylase    Mfl243 virulence associated protein, ribonuclease R    Mfl209 transcription elongation factor NusA    Mfl292 rRNA methyltransferase    Mfl374 triosephosphate isomerase    Mfl504 phosphotransferase system phosphohistidine-containing protein    Mfl565 ribokinase    Mfl642 peptide chain release factor 1    Mfl634 16S rRNA processing protein    Mfl541 class III heat shock DNA-binding ATP dependent Lon protease    Mfl404 phosphopyruvate hydratase    Mfl468 tyrosyl-tRNA synthetase    Mfl587 metal-dependent hydrolase    Mfl265 L-lactate dehydrogenase    Mfl596 hsp70 cofactor    Mfl416 exodeoxyribonuclease VII large subunit    Mfl331 DNA polymerase III subunit beta    Mfl002 phosphate transport system transcriptional regulator    Mfl236 tryptophanyl-tRNA synthetase    Mfl192 2-deoxyribose-5-phosphate aldolase    Mfl639 glucose-6-phosphate isomerase    Mfl254 hypothetical protein    Mfl478 dimethyladenosine transferase    Mfl005 DNA polymerase III subunit alpha    Mfl288 NAD kinase    Mfl193 adenine phosphoribosyltransferase    Mfl276 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA    Mfl671 translation initiation factor IF-2    Mfl295 preprotein translocase subunit SecA    Mfl057 alanyl-tRNA synthetase    Mfl613 threonyl-tRNA synthetase    Mfl177 lysidine synthetase    Mfl673 excinuclease ABC subunit B    Mfl058 thioredoxin reductase    Mfl064 structural maintenance of chromosomes smc superfamily protein    Mfl232 translation initiation factor IF-3    Mfl188 molecular chaperone DnaJ    Mfl414 hypothetical protein    Mfl303 16S rRNA methyltransferase GidB    Mfl662 phenylalanyl-tRNA synthetase subunit alpha    Mfl399 phosphoglycerate kinase    Mfl577 SsrA-binding protein    Mfl210 translation initiation factor IF-1    Mfl146 thymidylate synthase    Mfl419 cytosol aminopeptidase    Mfl070 tRNA (uracil-5-)-methyltransferase Gid    Mfl242 chromosomal segregation/condensation protein    Mfl549 tetrapyrrole methylase    Mfl103 glycerol-3-phosphate acyltransferase PlsX    Mfl230 adenylosuccinate synthetase    Mfl074 aspartyl-tRNA synthetase    Mfl365 tRNA-specific 2-thiouridylase MnmA    Mfl412 tRNA (uracil-5-)-methyltransferase Gid    Mfl532 hsp33 redox-regulated chaperone    Mfl018 GTPase ObgE    Mfl522 repair endonuclease subunit C    Mfl101 cytidylate kinase    Mfl198 tRNA (guanine-N(1)-)-methyltransferase    Mfl540 elongation factor Ts    Mfl560 serine hydroxymethyltransferase    Mfl106 signal recognition particle protein    Mfl479 DNA-binding/iron metalloprotein/AP endonuclease    Mfl484 16S rRNA (cytosine(967)-C(5))-methyltransferase    Mfl196 cell division protein FtsZ    Mfl392 seryl-tRNA synthetase    Mfl017 2,3-bisphosphoglycerate-independent phosphoglycerate mutase    Mfl502 tRNA modification GTPase TrmE    Mfl014 2-deoxyribose-5-phosphate aldolase    Mfl121 lysyl-tRNA synthetase    Mfl030 adenylate kinase    Mfl144 thiamin biosynthesis protein    Mfl584 isoleucyl-tRNA synthetase    Mfl389 1-pyrroline-5-carboxylate reductase    Mfl045 methionine adenosyltransferase    Mfl240 recombination protein U    Mfl203 hypoxanthine-guanine phosphoribosyltransferase    Mfl463 uridine kinase    Mfl306 glycyl-tRNA synthetase    Mfl268 phenylalanyl-tRNA synthetase subunit beta    Mfl398 DNA gyrase subunit B    Mfl006 glutamyl-tRNA synthetase    Mfl651 phosphoenolpyruvate-protein phosphotransferase    Mfl519 recombinase A    Mfl206 prolyl-tRNA synthetase    Mfl476 repair endonuclease subunit A    Mfl059 histidyl-tRNA synthetase    Mfl366 inorganic pyrophosphatase    Mfl544 cysteinyl-tRNA synthetase    Mfl087 cell division protein MraZ    Mfl395 GTPase    Mfl538 hypothetical protein    Mfl330 hypothetical protein    Mfl546 methionyl-tRNA synthetase    Mfl036 acetate kinase    Mfl044 ribosome recycling factor    Mfl555 cytosol aminopeptidase    Mfl071
Adenylate kinase Mfl144, preprotein translocase subunit SecA Mfl057 and class III heat shock DNA-binding ATP dependent Lon protease Mfl404 are found in the taxon Mesoplasma florum L1 and have cytoplasm as their cell component
tRNA modification GTPase TrmE    Mfl014 chromosome replication initiator DnaA    Mfl001 tRNA-specific 2-thiouridylase MnmA    Mfl412 isoleucyl-tRNA synthetase    Mfl389 leucyl-tRNA synthetase    Mfl490 threonyl-tRNA synthetase    Mfl177 hsp33 redox-regulated chaperone    Mfl018 adenylate kinase    Mfl144 preprotein translocase subunit SecA    Mfl057 class III heat shock DNA-binding ATP dependent Lon protease    Mfl404
action filter_type
action intersection
action find_reverse
entity Mesoplasma florum L1
relation found in taxon
action find_reverse
entity cytoplasm
relation cell component
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'found in taxon', 'Mesoplasma florum L1'], [{'concept': 'nutrient'}, 'cell component', 'cytoplasm']]}
SELECT DISTINCT ?u WHERE { ?u property:found_in_taxon resource:Mesoplasma_florum_L1 . ?u property:cell_component resource:cytoplasm . ?u rdf:type ontology:nutrient }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type
Q14864472
P682
Q3249551 Q181394
USER
Which processes are a biological processes that less number of nutrients are involved in than rhythmic process ?
(c(Q181394),P682,c(Q3249551))
action less
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find_reverse
entity Q14864472
relation P682
type Q181394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ?d ( COUNT ( ?o ) AS ?x ) WHERE { ?o property:P682 ?d . ?o rdf:type ontology:Q181394 . ?d rdf:type ontology:Q3249551 } GROUP BY ?d } . { SELECT DISTINCT ( COUNT ( ?j ) AS ?p ) WHERE { ?j property:P682 resource:Q14864472 . ?j rdf:type ontology:Q181394 } } . FILTER ( ?x < ?p ) }
rhythmic process
action less
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find_reverse
entity rhythmic process
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ?d ( COUNT ( ?o ) AS ?x ) WHERE { ?o property:biological_process ?d . ?o rdf:type ontology:nutrient . ?d rdf:type ontology:process } GROUP BY ?d } . { SELECT DISTINCT ( COUNT ( ?j ) AS ?p ) WHERE { ?j property:biological_process resource:rhythmic_process . ?j rdf:type ontology:nutrient } } . FILTER ( ?x < ?p ) }
[]
process nutrient
Q306383 Q14885910 Q162925
SYSTEM
G1/S transition of mitotic cell cycle, reproductive process, meiotic nuclear division
Q22269718 Q306383 Q22284496 Q22271548 Q9332 Q22293230 Q14873025 Q14865172 Q14885910 Q162925
(c(Q181394),P682,c(Q3249551))
action less
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find_reverse
entity Q14864472
relation P682
type Q181394
[ANSWERS] are a biological processes that less number of nutrients are involved in than rhythmic process
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ?d ( COUNT ( ?o ) AS ?x ) WHERE { ?o property:P682 ?d . ?o rdf:type ontology:Q181394 . ?d rdf:type ontology:Q3249551 } GROUP BY ?d } . { SELECT DISTINCT ( COUNT ( ?j ) AS ?p ) WHERE { ?j property:P682 resource:Q14864472 . ?j rdf:type ontology:Q181394 } } . FILTER ( ?x < ?p ) }
locomotion G1/S transition of mitotic cell cycle biological regulation cell killing behavior developmental process cellular process signaling reproductive process meiotic nuclear division
G1/S transition of mitotic cell cycle, reproductive process and meiotic nuclear division are a biological processes that less number of nutrients are involved in than rhythmic process
G1/S transition of mitotic cell cycle reproductive process meiotic nuclear division
action less
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find_reverse
entity rhythmic process
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?d WHERE { { SELECT DISTINCT ?d ( COUNT ( ?o ) AS ?x ) WHERE { ?o property:biological_process ?d . ?o rdf:type ontology:nutrient . ?d rdf:type ontology:process } GROUP BY ?d } . { SELECT DISTINCT ( COUNT ( ?j ) AS ?p ) WHERE { ?j property:biological_process resource:rhythmic_process . ?j rdf:type ontology:nutrient } } . FILTER ( ?x < ?p ) }
[]
Comparative Reasoning (All)
Comparative|More/Less|Single entity type|Incomplete
Q14885910
P682
Q3249551 Q181394
USER
And how about reproductive process?
(c(Q181394),P682,c(Q3249551))
action less
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find_reverse
entity Q14885910
relation P682
type Q181394
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?m WHERE { { SELECT DISTINCT ?m ( COUNT ( ?w ) AS ?a ) WHERE { ?w property:P682 ?m . ?m rdf:type ontology:Q3249551 . ?w rdf:type ontology:Q181394 } GROUP BY ?m } . { SELECT DISTINCT ( COUNT ( ?u ) AS ?r ) WHERE { ?u property:P682 resource:Q14885910 . ?u rdf:type ontology:Q181394 } } . FILTER ( ?a < ?r ) }
reproductive process
action less
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find_reverse
entity reproductive process
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?m WHERE { { SELECT DISTINCT ?m ( COUNT ( ?w ) AS ?a ) WHERE { ?w property:biological_process ?m . ?m rdf:type ontology:process . ?w rdf:type ontology:nutrient } GROUP BY ?m } . { SELECT DISTINCT ( COUNT ( ?u ) AS ?r ) WHERE { ?u property:biological_process resource:reproductive_process . ?u rdf:type ontology:nutrient } } . FILTER ( ?a < ?r ) }
[]
process nutrient
Q22284496 Q22271548
SYSTEM
biological regulation, cell killing
Q22284496 Q22271548
(c(Q181394),P682,c(Q3249551))
action less
action find_reverse_tuple_counts
relation P682
type Q3249551
type Q181394
action count
action filter_type
action find_reverse
entity Q14885910
relation P682
type Q181394
[ANSWERS]
[{'concept': 'Q181394'}, 'P682', {'concept': 'Q3249551'}]
SELECT DISTINCT ?m WHERE { { SELECT DISTINCT ?m ( COUNT ( ?w ) AS ?a ) WHERE { ?w property:P682 ?m . ?m rdf:type ontology:Q3249551 . ?w rdf:type ontology:Q181394 } GROUP BY ?m } . { SELECT DISTINCT ( COUNT ( ?u ) AS ?r ) WHERE { ?u property:P682 resource:Q14885910 . ?u rdf:type ontology:Q181394 } } . FILTER ( ?a < ?r ) }
biological regulation cell killing
biological regulation cell killing
action less
action find_reverse_tuple_counts
relation biological process
type process
type nutrient
action count
action filter_type
action find_reverse
entity reproductive process
relation biological process
type nutrient
[{'concept': 'nutrient'}, 'biological process', {'concept': 'process'}]
SELECT DISTINCT ?m WHERE { { SELECT DISTINCT ?m ( COUNT ( ?w ) AS ?a ) WHERE { ?w property:biological_process ?m . ?m rdf:type ontology:process . ?w rdf:type ontology:nutrient } GROUP BY ?m } . { SELECT DISTINCT ( COUNT ( ?u ) AS ?r ) WHERE { ?u property:biological_process resource:reproductive_process . ?u rdf:type ontology:nutrient } } . FILTER ( ?a < ?r ) }
[]
Comparative Reasoning (Count) (All)
Comparative|Count over More/Less|Mult. entity type
Q15323770
P129
Q181394 Q79529 Q8386
USER
How many nutrients do greater number of chemical substances or drugs interact with than Transient receptor potential cation channel subfamily M member 4 ?
(c(Q79529)|c(Q8386),P129,c(Q181394))
action count
action greater
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find_reverse
entity Q15323770
relation P129
type Q79529
type Q8386
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?u ) WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?p ) ?t WHERE { { ?w property:P129 ?t . ?t rdf:type ontology:Q181394 . ?w rdf:type ontology:Q79529 } UNION { ?w property:P129 ?t . ?w rdf:type ontology:Q8386 . ?t rdf:type ontology:Q181394 } } GROUP BY ?t } . { SELECT DISTINCT ( COUNT ( ?b ) AS ?c ) WHERE { ?b property:P129 resource:Q15323770 . { { ?b rdf:type ontology:Q79529 } UNION { ?b rdf:type ontology:Q8386 } } } } . FILTER ( ?p > ?c ) }
Transient receptor potential cation channel subfamily M member 4
action count
action greater
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find_reverse
entity Transient receptor potential cation channel subfamily M member 4
relation physically interacts with
type chemical substance
type drug
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?u ) WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?p ) ?t WHERE { { ?w property:physically_interacts_with ?t . ?t rdf:type ontology:nutrient . ?w rdf:type ontology:chemical_substance } UNION { ?w property:physically_interacts_with ?t . ?w rdf:type ontology:drug . ?t rdf:type ontology:nutrient } } GROUP BY ?t } . { SELECT DISTINCT ( COUNT ( ?b ) AS ?c ) WHERE { ?b property:physically_interacts_with resource:Transient_receptor_potential_cation_channel_subfamily_M_member_4 . { { ?b rdf:type ontology:chemical_substance } UNION { ?b rdf:type ontology:drug } } } } . FILTER ( ?p > ?c ) }
[]
nutrient chemical substance drug
SYSTEM
257
Q21115605 Q21110942 Q7050954 Q21116154 Q14872770 Q309513 Q21173427 Q308856 Q21982207 Q12746346 Q21108695 Q4847910 Q21123087 Q2271947 Q7671480 Q413209 Q287961 Q2663095 Q905729 Q21497881 Q21173164 Q21120422 Q21120424 Q417057 Q21154358 Q6155969 Q5123372 Q21147674 Q21113310 Q21113313 Q1499998 Q21118071 Q7553281 Q21108624 Q410142 Q420470 Q288797 Q21172390 Q1486720 Q4789588 Q21107843 Q4789584 Q4789587 Q287958 Q5500227 Q1084878 Q21108402 Q21126810 Q21123083 Q14900999 Q415287 Q7671479 Q21136123 Q7169506 Q415607 Q21109365 Q21107439 Q15323278 Q21110867 Q21103155 Q5038044 Q21109218 Q21122995 Q415976 Q21496563 Q21123244 Q21107890 Q410798 Q21103207 Q254943 Q6414726 Q4847900 Q4847907 Q7671495 Q21121815 Q4639596 Q21116946 Q21114332 Q21982210 Q6901317 Q416601 Q5512777 Q5401858 Q5401857 Q21120458 Q4734884 Q4734887 Q4734886 Q21988386 Q22676679 Q21173381 Q21497941 Q21102511 Q21119575 Q21126779 Q21497890 Q21126777 Q21116162 Q21116164 Q417801 Q2844056 Q21120420 Q5773155 Q21173310 Q5500222 Q7390898 Q21112690 Q21120423 Q22679015 Q21125248 Q21115334 Q14905969 Q21118353 Q4822491 Q7799753 Q21175110 Q21173406 Q288382 Q21119818 Q4859538 Q21115051 Q21115052 Q909409 Q5513985 Q415364 Q21109298 Q21109355 Q21109354 Q21115954 Q409867 Q4734894 Q21110872 Q4734892 Q21103146 Q21114578 Q3454525 Q21108118 Q4734891 Q21114576 Q21108785 Q21118072 Q21131500 Q21498865 Q21123247 Q5500223 Q128861 Q21132004 Q21114845 Q21119156 Q2819188 Q21119157 Q21991520 Q6590408 Q21132652 Q6594119 Q21122493 Q7671468 Q21100975 Q4897175 Q21102111 Q412214 Q1085078 Q7673856 Q21118862 Q21126833 Q21110936 Q21132917 Q21132915 Q6592965 Q905000 Q21115961 Q21115962 Q21115965 Q21105176 Q14912057 Q418404 Q8083989 Q21498709 Q21102075 Q21497878 Q311568 Q21173485 Q5773160 Q6590443 Q21122997 Q3062781 Q21125253 Q12746120 Q11071075 Q6449561 Q7799751 Q21138907 Q5629167 Q21115815 Q21115816 Q21115819 Q288395 Q21110532 Q21108125 Q5446453 Q21115046 Q21115043 Q415271 Q7834290 Q21114585 Q21114582 Q408572 Q21497939 Q3454531 Q21497937 Q21497936 Q21982979 Q21109462 Q21122433 Q21122435 Q3162114 Q3415811 Q424401 Q5009781 Q21119822 Q21172800 Q21173206 Q21173207 Q285613 Q904241 Q21114850 Q21174141 Q21130911 Q21150595 Q587961 Q7119501 Q15324694 Q21096394 Q21201294 Q21496564 Q7671477 Q1949517 Q21110922 Q21113292 Q21498666 Q21109363 Q21109359 Q6592976 Q21157551 Q7120338 Q21983336 Q21102146 Q21103162 Q21121816 Q6589190 Q6155967 Q21100360 Q21984383 Q15324415 Q5520260 Q2034004 Q21134814
(c(Q79529)|c(Q8386),P129,c(Q181394))
action count
action greater
action union
action find_reverse_tuple_counts
relation P129
type Q181394
type Q79529
action find_reverse_tuple_counts
relation P129
type Q181394
type Q8386
action count
action filter_multi_types
action find_reverse
entity Q15323770
relation P129
type Q79529
type Q8386
[ANSWER]
[[{'concept': 'Q79529'}, {'concept': 'Q8386'}], 'P129', {'concept': 'Q181394'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?u ) WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?p ) ?t WHERE { { ?w property:P129 ?t . ?t rdf:type ontology:Q181394 . ?w rdf:type ontology:Q79529 } UNION { ?w property:P129 ?t . ?w rdf:type ontology:Q8386 . ?t rdf:type ontology:Q181394 } } GROUP BY ?t } . { SELECT DISTINCT ( COUNT ( ?b ) AS ?c ) WHERE { ?b property:P129 resource:Q15323770 . { { ?b rdf:type ontology:Q79529 } UNION { ?b rdf:type ontology:Q8386 } } } } . FILTER ( ?p > ?c ) }
Vascular endothelial growth factor receptor 1 G-protein coupled receptor 55 Sodium-dependent noradrenaline transporter Adenosine receptor A3 Histamine H4 receptor Histamine H1 receptor Histone deacetylase 9 D(4) dopamine receptor Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 Nociceptin receptor G-protein coupled receptor 84 Muscarinic acetylcholine receptor M2 Neuromedin-K receptor Sodium-dependent dopamine transporter Transient receptor potential cation channel subfamily M member 4 Transient receptor potential cation channel subfamily V member 1 Beta-2 adrenergic receptor Glucocorticoid receptor Prostaglandin D2 receptor G protein-activated inward rectifier potassium channel 4 Carbonic anhydrase 1 Prostaglandin E2 receptor EP4 subtype Prostaglandin E2 receptor EP2 subtype Vitamin D3 receptor Histone deacetylase 3 Tyrosine-protein kinase JAK3 Mu-type opioid receptor Estrogen-related receptor gamma Gamma-aminobutyric acid receptor subunit rho-1 Gamma-aminobutyric acid receptor subunit rho-2 Voltage-dependent L-type calcium channel subunit alpha-1C Steroid hormone receptor ERR2 Solute carrier family 12 member 3 Platelet-derived growth factor receptor beta Sodium-dependent serotonin transporter Cystic fibrosis transmembrane conductance regulator 5-hydroxytryptamine receptor 1B Vascular endothelial growth factor receptor 2 Glutamate receptor 3 Vasopressin V2 receptor Potassium voltage-gated channel subfamily A member 10 Vasopressin V1a receptor Vasopressin V1b receptor Beta-1 adrenergic receptor Free fatty acid receptor 3 Peroxisome proliferator-activated receptor gamma Chloride channel protein 2 Prostaglandin G/H synthase 1 Substance-K receptor Kappa-type opioid receptor Aromatase Transient receptor potential cation channel subfamily M member 3 Solute carrier organic anion transporter family member 2B1 Peroxisome proliferator-activated receptor alpha 3-hydroxy-3-methylglutaryl-coenzyme A reductase 5-hydroxytryptamine receptor 4 Farnesyl pyrophosphate synthase Transient receptor potential cation channel subfamily A member 1 D(1A) dopamine receptor Glycine receptor subunit alpha-1 Carbonic anhydrase 4 Serine/threonine-protein kinase B-raf Melatonin receptor type 1A Proto-oncogene tyrosine-protein kinase receptor Ret Potassium voltage-gated channel subfamily C member 1 cGMP-inhibited 3',5'-cyclic phosphodiesterase B Potassium voltage-gated channel subfamily A member 7 cGMP-specific 3',5'-cyclic phosphodiesterase G-protein coupled bile acid receptor 1 Retinoic acid receptor alpha ATP-sensitive inward rectifier potassium channel 11 Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M4 Transient receptor potential cation channel subfamily M member 8 P2Y purinoceptor 11 5-hydroxytryptamine receptor 2B Carbonic anhydrase 12 Tubulin beta chain Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 Amine oxidase [flavin-containing] A Androgen receptor Gamma-aminobutyric acid receptor subunit alpha-4 Estrogen receptor Estrogen receptor beta Proteasome subunit beta type-5 Alpha-1A adrenergic receptor Alpha-1D adrenergic receptor Alpha-1B adrenergic receptor Delta-type opioid receptor Acetylcholinesterase Histone deacetylase 6 5-hydroxytryptamine receptor 4 Platelet-derived growth factor receptor alpha P2Y purinoceptor 1 P2Y purinoceptor 4 ATP-sensitive inward rectifier potassium channel 8 P2Y purinoceptor 2 Adenosine receptor A2a Adenosine receptor A2b Extracellular calcium-sensing receptor Muscarinic acetylcholine receptor M3 Prostaglandin E2 receptor EP1 subtype Histone deacetylase 2 Endothelin B receptor Free fatty acid receptor 1 Sodium/glucose cotransporter 2 fMet-Leu-Phe receptor Prostaglandin E2 receptor EP3 subtype Cholinesterase Solute carrier organic anion transporter family member 1B3 Delta-type opioid receptor Potassium voltage-gated channel subfamily A member 1 Vascular endothelial growth factor receptor 3 Aurora kinase B Thyroid hormone receptor beta Vitamin K epoxide reductase complex subunit 1 Histone deacetylase 8 Histamine H4 receptor Intermediate conductance calcium-activated potassium channel protein 4 Metabotropic glutamate receptor 2 5-hydroxytryptamine receptor 1E 5-hydroxytryptamine receptor 1F Mast/stem cell growth factor receptor Kit Gonadotropin-releasing hormone receptor Prostaglandin G/H synthase 2 Protein kinase C epsilon type 5-hydroxytryptamine receptor 7 Proto-oncogene tyrosine-protein kinase Src Glycine receptor subunit alpha-2 Nuclear receptor subfamily 1 group I member 2 Alpha-2B adrenergic receptor D(3) dopamine receptor Alpha-2A adrenergic receptor Glycine receptor subunit alpha-3 Gamma-aminobutyric acid receptor subunit alpha-3 Progesterone receptor 5-hydroxytryptamine receptor 2C Alpha-2C adrenergic receptor Gamma-aminobutyric acid receptor subunit alpha-5 Potassium voltage-gated channel subfamily KQT member 4 Steroid hormone receptor ERR1 D(1B) dopamine receptor Beta-3 adrenergic receptor cGMP-inhibited 3',5'-cyclic phosphodiesterase A Free fatty acid receptor 2 Angiotensin-converting enzyme Endothelin-1 receptor Protein kinase C gamma type Inosine-5'-monophosphate dehydrogenase 2 Type-1 angiotensin II receptor Inosine-5'-monophosphate dehydrogenase 1 Trace amine-associated receptor 1 Metabotropic glutamate receptor 8 Glucose-dependent insulinotropic receptor Metabotropic glutamate receptor 3 Prostaglandin F2-alpha receptor Short transient receptor potential channel 5 Macrophage colony-stimulating factor 1 receptor Beta-3 adrenergic receptor Acid-sensing ion channel 3 Dipeptidyl peptidase 4 Bile acid receptor Substance-P receptor Glutamate receptor ionotropic, NMDA 1 Polycystic kidney disease 2-like 1 protein G-protein coupled receptor 35 Carbonic anhydrase 14 Carbonic anhydrase 7 Retinoic acid receptor gamma Potassium voltage-gated channel subfamily H member 2 Glutamate receptor 1 Glutamate receptor 2 Glutamate receptor 4 Anoctamin-1 ATP-sensitive inward rectifier potassium channel 11 C-C chemokine receptor type 5 Kappa-type opioid receptor Adenosine receptor A2b Acid-sensing ion channel 1 G protein-activated inward rectifier potassium channel 2 Histamine H2 receptor Hydroxycarboxylic acid receptor 2 Histone deacetylase 5 Oxytocin receptor Melatonin receptor type 1B Adenosine receptor A1 Solute carrier organic anion transporter family member 1B1 Muscarinic acetylcholine receptor M5 Trace amine-associated receptor 1 Potassium voltage-gated channel subfamily KQT member 2 Thyroid hormone receptor alpha Ryanodine receptor 1 Histone deacetylase 1 Glutamate receptor ionotropic, NMDA 2A Glutamate receptor ionotropic, NMDA 2B Glutamate receptor ionotropic, NMDA 2C Histamine H3 receptor Potassium voltage-gated channel subfamily H member 1 5-hydroxytryptamine receptor 3A Fibroblast growth factor receptor 1 5-hydroxytryptamine receptor 1D 5-hydroxytryptamine receptor 1A Receptor tyrosine-protein kinase erbB-2 Transient receptor potential cation channel subfamily A member 1 Gamma-aminobutyric acid receptor subunit alpha-6 Gamma-aminobutyric acid receptor subunit alpha-2 Sigma non-opioid intracellular receptor 1 5-hydroxytryptamine receptor 7 Mineralocorticoid receptor 5-hydroxytryptamine receptor 5A 5-hydroxytryptamine receptor 3A Alpha-1B adrenergic receptor Amine oxidase [flavin-containing] B Orexin receptor type 1 Orexin receptor type 2 Tyrosine-protein kinase JAK2 Ryanodine receptor 2 Epidermal growth factor receptor Receptor-type tyrosine-protein kinase FLT3 Inward rectifier potassium channel 4 Free fatty acid receptor 4 Histone deacetylase 4 Histone deacetylase 7 Serine/threonine-protein kinase mTOR Sodium/glucose cotransporter 1 Protein kinase C beta type Prostaglandin D2 receptor 2 Glutamate receptor ionotropic, NMDA 2D Cannabinoid receptor 2 Tyrosine-protein kinase ABL1 Protein kinase C alpha type Transient receptor potential cation channel subfamily V member 3 Potassium voltage-gated channel subfamily A member 5 Cannabinoid receptor 1 Potassium voltage-gated channel subfamily A member 7 Transient receptor potential cation channel subfamily M member 2 5-hydroxytryptamine receptor 2A N-arachidonyl glycine receptor Gamma-aminobutyric acid receptor subunit rho-3 5-hydroxytryptamine receptor 1B 5-hydroxytryptamine receptor 6 5-hydroxytryptamine receptor 5A Retinoic acid receptor beta Histone deacetylase 10 Protein kinase C delta type Histamine H3 receptor Voltage-dependent L-type calcium channel subunit alpha-1D Glycine receptor subunit beta P2Y purinoceptor 13 Metabotropic glutamate receptor 5 Tyrosine-protein kinase JAK1 Dual specificity mitogen-activated protein kinase kinase 1 Voltage-dependent L-type calcium channel subunit alpha-1F Transient receptor potential cation channel subfamily M member 8 Gamma-aminobutyric acid receptor subunit alpha-1 D(2) dopamine receptor Equilibrative nucleoside transporter 4
257
action count
action greater
action union
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type chemical substance
action find_reverse_tuple_counts
relation physically interacts with
type nutrient
type drug
action count
action filter_multi_types
action find_reverse
entity Transient receptor potential cation channel subfamily M member 4
relation physically interacts with
type chemical substance
type drug
[[{'concept': 'chemical substance'}, {'concept': 'drug'}], 'physically interacts with', {'concept': 'nutrient'}]
SELECT DISTINCT ( COUNT ( ?t ) AS ?u ) WHERE { { SELECT DISTINCT ( COUNT ( ?w ) AS ?p ) ?t WHERE { { ?w property:physically_interacts_with ?t . ?t rdf:type ontology:nutrient . ?w rdf:type ontology:chemical_substance } UNION { ?w property:physically_interacts_with ?t . ?w rdf:type ontology:drug . ?t rdf:type ontology:nutrient } } GROUP BY ?t } . { SELECT DISTINCT ( COUNT ( ?b ) AS ?c ) WHERE { ?b property:physically_interacts_with resource:Transient_receptor_potential_cation_channel_subfamily_M_member_4 . { { ?b rdf:type ontology:chemical_substance } UNION { ?b rdf:type ontology:drug } } } } . FILTER ( ?p > ?c ) }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q27476658 Q27761368
P702
Q863908
USER
Which nucleic acid sequences genes encode phosphopyruvate hydratase    Mfl468 or lipoprotein    SDY_1881 ?
OR((Q27761368,P702,c(Q863908)), (Q27476658,P702,c(Q863908)))
action filter_type
action union
action find
entity Q27761368
relation P702
action find
entity Q27476658
relation P702
type Q863908
{'OR': [['Q27761368', 'P702', {'concept': 'Q863908'}], ['Q27476658', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?d WHERE { { { resource:Q27761368 property:P702 ?d } UNION { resource:Q27476658 property:P702 ?d } } . ?d rdf:type ontology:Q863908 }
lipoprotein    SDY_1881 phosphopyruvate hydratase    Mfl468
action filter_type
action union
action find
entity phosphopyruvate hydratase    Mfl468
relation encoded by
action find
entity lipoprotein    SDY_1881
relation encoded by
type nucleic acid sequence
{'OR': [['phosphopyruvate hydratase    Mfl468', 'encoded by', {'concept': 'nucleic acid sequence'}], ['lipoprotein    SDY_1881', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?d WHERE { { { resource:phosphopyruvate_hydratase____Mfl468 property:encoded_by ?d } UNION { resource:lipoprotein____SDY_1881 property:encoded_by ?d } } . ?d rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23142857 Q23372792
SYSTEM
lipoprotein    SDY_1881, phosphopyruvate hydratase    Mfl468
Q23142857 Q23372792
OR((Q27761368,P702,c(Q863908)), (Q27476658,P702,c(Q863908)))
action filter_type
action union
action find
entity Q27761368
relation P702
action find
entity Q27476658
relation P702
type Q863908
[ANSWERS]
{'OR': [['Q27761368', 'P702', {'concept': 'Q863908'}], ['Q27476658', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?d WHERE { { { resource:Q27761368 property:P702 ?d } UNION { resource:Q27476658 property:P702 ?d } } . ?d rdf:type ontology:Q863908 }
lipoprotein    SDY_1881 phosphopyruvate hydratase    Mfl468
Lipoprotein SDY 1881 and phosphopyruvate hydratase Mfl468 encode phosphopyruvate hydratase Mfl468 or lipoprotein SDY_1881
lipoprotein    SDY_1881 phosphopyruvate hydratase    Mfl468
action filter_type
action union
action find
entity phosphopyruvate hydratase    Mfl468
relation encoded by
action find
entity lipoprotein    SDY_1881
relation encoded by
type nucleic acid sequence
{'OR': [['phosphopyruvate hydratase    Mfl468', 'encoded by', {'concept': 'nucleic acid sequence'}], ['lipoprotein    SDY_1881', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?d WHERE { { { resource:phosphopyruvate_hydratase____Mfl468 property:encoded_by ?d } UNION { resource:lipoprotein____SDY_1881 property:encoded_by ?d } } . ?d rdf:type ontology:nucleic_acid_sequence }
[]