Simple Question (Direct)
Simple Question
Q23064808
P703
Q631147
USER
Which taxon does glycosyltransferase    LA_3795 belong to ?
(Q23064808,P703,c(Q631147))
action filter_type
action find
entity Q23064808
relation P703
type Q631147
['Q23064808', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:Q631147 . resource:Q23064808 property:P703 ?d }
glycosyltransferase    LA_3795
action filter_type
action find
entity glycosyltransferase    LA_3795
relation found in taxon
type infraspecific name
['glycosyltransferase    LA_3795', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:infraspecific_name . resource:glycosyltransferase____LA_3795 property:found_in_taxon ?d }
[]
infraspecific name
Q21065229
SYSTEM
Leptospira interrogans serovar Lai str. 56601
Q21065229
(Q23064808,P703,c(Q631147))
action filter_type
action find
entity Q23064808
relation P703
type Q631147
Glycosyltransferase LA_3795 belongs to [ANSWER]
['Q23064808', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:Q631147 . resource:Q23064808 property:P703 ?d }
Leptospira interrogans serovar Lai str. 56601
Glycosyltransferase LA_3795 belongs to Leptospira interrogans serovar Lai str. 56601
Leptospira interrogans serovar Lai str. 56601
action filter_type
action find
entity glycosyltransferase    LA_3795
relation found in taxon
type infraspecific name
['glycosyltransferase    LA_3795', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?d WHERE { ?d rdf:type ontology:infraspecific_name . resource:glycosyltransferase____LA_3795 property:found_in_taxon ?d }
[]
Simple Question (Coreferenced)
Simple Question|Single Entity|Indirect
Q23064808
P688
Q863908
USER
Which nucleic acid sequence encodes that nutrient ?
(c(Q863908),P688,Q21065229)
action filter_type
action find_reverse
entity Q23064808
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q21065229']
SELECT DISTINCT ?q WHERE { ?q property:P688 resource:Q23064808 . ?q rdf:type ontology:Q863908 }
glycosyltransferase    LA_3795
action filter_type
action find_reverse
entity glycosyltransferase    LA_3795
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Leptospira interrogans serovar Lai str. 56601']
SELECT DISTINCT ?q WHERE { ?q property:encodes resource:glycosyltransferase____LA_3795 . ?q rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23025564
SYSTEM
glycosyltransferase    LA_3795
Q23025564
(c(Q863908),P688,Q21065229)
action filter_type
action find_reverse
entity Q23064808
relation P688
type Q863908
The glycosyltransferase LA 3795 encodes that nutrient
[{'concept': 'Q863908'}, 'P688', 'Q21065229']
SELECT DISTINCT ?q WHERE { ?q property:P688 resource:Q23064808 . ?q rdf:type ontology:Q863908 }
glycosyltransferase    LA_3795
The glycosyltransferase LA 3795 encodes that nutrient
glycosyltransferase    LA_3795
action filter_type
action find_reverse
entity glycosyltransferase    LA_3795
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'Leptospira interrogans serovar Lai str. 56601']
SELECT DISTINCT ?q WHERE { ?q property:encodes resource:glycosyltransferase____LA_3795 . ?q rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation|Incomplete
Q24152583 Q23064808
P688
Q863908
USER
Or imidazole glycerol phosphate synthase subunit HisH    NRG857_10315?
OR((c(Q863908),P688,Q23064808), (c(Q863908),P688,Q24152583))
action filter_type
action union
action find_reverse
entity Q23064808
relation P688
action find_reverse
entity Q24152583
relation P688
type Q863908
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q23064808'], [{'concept': 'Q863908'}, 'P688', 'Q24152583']]}
SELECT DISTINCT ?y WHERE { { { ?y property:P688 resource:Q23064808 } UNION { ?y property:P688 resource:Q24152583 } } . ?y rdf:type ontology:Q863908 }
imidazole glycerol phosphate synthase subunit HisH    NRG857_10315 glycosyltransferase    LA_3795
action filter_type
action union
action find_reverse
entity glycosyltransferase    LA_3795
relation encodes
action find_reverse
entity imidazole glycerol phosphate synthase subunit HisH    NRG857_10315
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'glycosyltransferase    LA_3795'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'imidazole glycerol phosphate synthase subunit HisH    NRG857_10315']]}
SELECT DISTINCT ?y WHERE { { { ?y property:encodes resource:glycosyltransferase____LA_3795 } UNION { ?y property:encodes resource:imidazole_glycerol_phosphate_synthase_subunit_HisH____NRG857_10315 } } . ?y rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23025564 Q23101530
SYSTEM
glycosyltransferase    LA_3795, imidazole glycerol phosphate synthase subunit HisH    NRG857_10315
Q23025564 Q23101530
OR((c(Q863908),P688,Q23064808), (c(Q863908),P688,Q24152583))
action filter_type
action union
action find_reverse
entity Q23064808
relation P688
action find_reverse
entity Q24152583
relation P688
type Q863908
[ANSWERS]
{'OR': [[{'concept': 'Q863908'}, 'P688', 'Q23064808'], [{'concept': 'Q863908'}, 'P688', 'Q24152583']]}
SELECT DISTINCT ?y WHERE { { { ?y property:P688 resource:Q23064808 } UNION { ?y property:P688 resource:Q24152583 } } . ?y rdf:type ontology:Q863908 }
glycosyltransferase    LA_3795 imidazole glycerol phosphate synthase subunit HisH    NRG857_10315
glycosyltransferase    LA_3795 imidazole glycerol phosphate synthase subunit HisH    NRG857_10315
action filter_type
action union
action find_reverse
entity glycosyltransferase    LA_3795
relation encodes
action find_reverse
entity imidazole glycerol phosphate synthase subunit HisH    NRG857_10315
relation encodes
type nucleic acid sequence
{'OR': [[{'concept': 'nucleic acid sequence'}, 'encodes', 'glycosyltransferase    LA_3795'], [{'concept': 'nucleic acid sequence'}, 'encodes', 'imidazole glycerol phosphate synthase subunit HisH    NRG857_10315']]}
SELECT DISTINCT ?y WHERE { { { ?y property:encodes resource:glycosyltransferase____LA_3795 } UNION { ?y property:encodes resource:imidazole_glycerol_phosphate_synthase_subunit_HisH____NRG857_10315 } } . ?y rdf:type ontology:nucleic_acid_sequence }
[]
Clarification
Simple Question|Single Entity|Indirect
Q23025564
P702
Q181394
USER
Which nutrient is encoded by that nucleic acid sequence ?
(c(Q181394),P702,Q23025564)
action filter_type
action find_reverse
entity Q23025564
relation P702
type Q181394
[{'concept': 'Q181394'}, 'P702', 'Q23025564']
SELECT DISTINCT ?e WHERE { ?e property:P702 resource:Q23025564 . ?e rdf:type ontology:Q181394 }
glycosyltransferase    LA_3795
action filter_type
action find_reverse
entity glycosyltransferase    LA_3795
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'glycosyltransferase    LA_3795']
SELECT DISTINCT ?e WHERE { ?e property:encoded_by resource:glycosyltransferase____LA_3795 . ?e rdf:type ontology:nutrient }
[]
nutrient
Clarification for simple ques.
Q23101530
SYSTEM
Did you mean imidazole glycerol phosphate synthase subunit HisH    NRG857_10315 ?
Q23025564 Q23101530
(c(Q181394),P702,Q23025564) (c(Q181394),P702,Q23101530)
[ANSWER]
[{'concept': 'Q181394'}, 'P702', 'Q23025564'] [{'concept': 'Q181394'}, 'P702', 'Q23101530']
SELECT DISTINCT ?e WHERE { ?e property:P702 resource:Q23025564 . ?e rdf:type ontology:Q181394 }
glycosyltransferase    LA_3795 imidazole glycerol phosphate synthase subunit HisH    NRG857_10315
Did you mean imidazole glycerol phosphate synthase subunit HisH    NRG857_10315 ?
imidazole glycerol phosphate synthase subunit HisH    NRG857_10315
[{'concept': 'nutrient'}, 'encoded by', 'glycosyltransferase    LA_3795'] [{'concept': 'nutrient'}, 'encoded by', 'imidazole glycerol phosphate synthase subunit HisH    NRG857_10315']
SELECT DISTINCT ?e WHERE { ?e property:encoded_by resource:glycosyltransferase____LA_3795 . ?e rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
USER
No, I meant glycosyltransferase    LA_3795. Could you tell me the answer for that?
(c(Q181394),P702,Q23025564)
Q23025564
[{'concept': 'Q181394'}, 'P702', 'Q23025564']
[{'concept': 'nutrient'}, 'encoded by', 'glycosyltransferase    LA_3795']
[]
Q23064808
SYSTEM
glycosyltransferase    LA_3795
Q23064808
(c(Q181394),P702,Q23025564)
action filter_type
action find_reverse
entity Q23025564
relation P702
type Q181394
The glycosyltransferase LA 3795 is encoded by that nucleic acid sequence
[{'concept': 'Q181394'}, 'P702', 'Q23025564']
SELECT DISTINCT ?e WHERE { ?e property:P702 resource:Q23025564 . ?e rdf:type ontology:Q181394 }
glycosyltransferase    LA_3795
The glycosyltransferase LA 3795 is encoded by that nucleic acid sequence
glycosyltransferase    LA_3795
action filter_type
action find_reverse
entity glycosyltransferase    LA_3795
relation encoded by
type nutrient
[{'concept': 'nutrient'}, 'encoded by', 'glycosyltransferase    LA_3795']
SELECT DISTINCT ?e WHERE { ?e property:encoded_by resource:glycosyltransferase____LA_3795 . ?e rdf:type ontology:nutrient }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23064808 Q414050
P682
Q1057
USER
How many metabolic processes are a biological processes that glycosyltransferase    LA_3795 or Klotho are involved in ?
(Q23064808,P682,c(Q1057)) (Q414050,P682,c(Q1057))
action count
action union
action filter_type
action find
entity Q23064808
relation P682
type Q1057
action filter_type
action find
entity Q414050
relation P682
type Q1057
['Q23064808', 'P682', {'concept': 'Q1057'}] ['Q414050', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?j ) WHERE { VALUES ( ?h ) { ( resource:Q414050 ) ( resource:Q23064808 ) } . ?h property:P682 ?s }
glycosyltransferase    LA_3795 Klotho
action count
action union
action filter_type
action find
entity glycosyltransferase    LA_3795
relation biological process
type metabolic process
action filter_type
action find
entity Klotho
relation biological process
type metabolic process
['glycosyltransferase    LA_3795', 'biological process', {'concept': 'metabolic process'}] ['Klotho', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?j ) WHERE { VALUES ( ?h ) { ( resource:Klotho ) ( resource:glycosyltransferase____LA_3795 ) } . ?h property:biological_process ?s }
[]
metabolic process
SYSTEM
2
Q14762260 Q22276072
(Q23064808,P682,c(Q1057)) (Q414050,P682,c(Q1057))
action count
action union
action filter_type
action find
entity Q23064808
relation P682
type Q1057
action filter_type
action find
entity Q414050
relation P682
type Q1057
[ANSWER]
['Q23064808', 'P682', {'concept': 'Q1057'}] ['Q414050', 'P682', {'concept': 'Q1057'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?j ) WHERE { VALUES ( ?h ) { ( resource:Q414050 ) ( resource:Q23064808 ) } . ?h property:P682 ?s }
carbohydrate metabolic process glycosyl compound metabolic process
2
action count
action union
action filter_type
action find
entity glycosyltransferase    LA_3795
relation biological process
type metabolic process
action filter_type
action find
entity Klotho
relation biological process
type metabolic process
['glycosyltransferase    LA_3795', 'biological process', {'concept': 'metabolic process'}] ['Klotho', 'biological process', {'concept': 'metabolic process'}]
SELECT DISTINCT ( COUNT ( ?s ) AS ?j ) WHERE { VALUES ( ?h ) { ( resource:Klotho ) ( resource:glycosyltransferase____LA_3795 ) } . ?h property:biological_process ?s }
[]
Quantitative Reasoning (Count) (All)
Quantitative|Count|Mult. entity type
Q23064808 Q8054
P688
Q863908
USER
How many nucleic acid sequences encodes glycosyltransferase    LA_3795 or protein ?
(c(Q863908),P688,Q23064808) (c(Q863908),P688,Q8054)
action count
action union
action filter_type
action find_reverse
entity Q23064808
relation P688
type Q863908
action filter_type
action find_reverse
entity Q8054
relation P688
type Q863908
[{'concept': 'Q863908'}, 'P688', 'Q23064808'] [{'concept': 'Q863908'}, 'P688', 'Q8054']
SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) WHERE { VALUES ( ?s ) { ( resource:Q23064808 ) ( resource:Q8054 ) } . ?q property:P688 ?s }
glycosyltransferase    LA_3795 protein
action count
action union
action filter_type
action find_reverse
entity glycosyltransferase    LA_3795
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity protein
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'glycosyltransferase    LA_3795'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'protein']
SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) WHERE { VALUES ( ?s ) { ( resource:glycosyltransferase____LA_3795 ) ( resource:protein ) } . ?q property:encodes ?s }
[]
nucleic acid sequence
SYSTEM
2
Q23025564 Q20747295
(c(Q863908),P688,Q23064808) (c(Q863908),P688,Q8054)
action count
action union
action filter_type
action find_reverse
entity Q23064808
relation P688
type Q863908
action filter_type
action find_reverse
entity Q8054
relation P688
type Q863908
[ANSWER]
[{'concept': 'Q863908'}, 'P688', 'Q23064808'] [{'concept': 'Q863908'}, 'P688', 'Q8054']
SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) WHERE { VALUES ( ?s ) { ( resource:Q23064808 ) ( resource:Q8054 ) } . ?q property:P688 ?s }
glycosyltransferase    LA_3795 protein-coding gene
2
action count
action union
action filter_type
action find_reverse
entity glycosyltransferase    LA_3795
relation encodes
type nucleic acid sequence
action filter_type
action find_reverse
entity protein
relation encodes
type nucleic acid sequence
[{'concept': 'nucleic acid sequence'}, 'encodes', 'glycosyltransferase    LA_3795'] [{'concept': 'nucleic acid sequence'}, 'encodes', 'protein']
SELECT DISTINCT ( COUNT ( ?q ) AS ?z ) WHERE { VALUES ( ?s ) { ( resource:glycosyltransferase____LA_3795 ) ( resource:protein ) } . ?q property:encodes ?s }
[]