Simple Question (Direct)
Simple Question
Q27761623
P703
Q631147
USER
Which taxon is peptide ABC transporter ATP-binding protein    TM0074 a part of ?
(Q27761623,P703,c(Q631147))
action filter_type
action find
entity Q27761623
relation P703
type Q631147
['Q27761623', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?h WHERE { resource:Q27761623 property:P703 ?h . ?h rdf:type ontology:Q631147 }
peptide ABC transporter ATP-binding protein    TM0074
action filter_type
action find
entity peptide ABC transporter ATP-binding protein    TM0074
relation found in taxon
type infraspecific name
['peptide ABC transporter ATP-binding protein    TM0074', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?h WHERE { resource:peptide_ABC_transporter_ATP-binding_protein____TM0074 property:found_in_taxon ?h . ?h rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q21102991
SYSTEM
Thermotoga maritima MSB8
Q21102991
(Q27761623,P703,c(Q631147))
action filter_type
action find
entity Q27761623
relation P703
type Q631147
[ANSWER] is peptide ABC transporter ATP-binding protein TM0074 a part of
['Q27761623', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?h WHERE { resource:Q27761623 property:P703 ?h . ?h rdf:type ontology:Q631147 }
Thermotoga maritima MSB8
Thermotoga maritima MSB8 is peptide ABC transporter ATP-binding protein TM0074 a part of
Thermotoga maritima MSB8
action filter_type
action find
entity peptide ABC transporter ATP-binding protein    TM0074
relation found in taxon
type infraspecific name
['peptide ABC transporter ATP-binding protein    TM0074', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?h WHERE { resource:peptide_ABC_transporter_ATP-binding_protein____TM0074 property:found_in_taxon ?h . ?h rdf:type ontology:infraspecific_name }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q24128899 Q27761623
P702
Q863908
USER
Which nucleic acid sequences encode peptide ABC transporter ATP-binding protein    TM0074 or integral membrane protein TerC    EAE_08795 ?
OR((Q27761623,P702,c(Q863908)), (Q24128899,P702,c(Q863908)))
action filter_type
action union
action find
entity Q27761623
relation P702
action find
entity Q24128899
relation P702
type Q863908
{'OR': [['Q27761623', 'P702', {'concept': 'Q863908'}], ['Q24128899', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?h WHERE { { VALUES ( ?n ) { ( resource:Q24128899 ) ( resource:Q27761623 ) } . ?n property:P702 ?h } . ?h rdf:type ontology:Q863908 }
integral membrane protein TerC    EAE_08795 peptide ABC transporter ATP-binding protein    TM0074
action filter_type
action union
action find
entity peptide ABC transporter ATP-binding protein    TM0074
relation encoded by
action find
entity integral membrane protein TerC    EAE_08795
relation encoded by
type nucleic acid sequence
{'OR': [['peptide ABC transporter ATP-binding protein    TM0074', 'encoded by', {'concept': 'nucleic acid sequence'}], ['integral membrane protein TerC    EAE_08795', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?h WHERE { { VALUES ( ?n ) { ( resource:integral_membrane_protein_TerC____EAE_08795 ) ( resource:peptide_ABC_transporter_ATP-binding_protein____TM0074 ) } . ?n property:encoded_by ?h } . ?h rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23076719 Q23299515
SYSTEM
integral membrane protein TerC    EAE_08795, peptide ABC transporter ATP-binding protein    TM0074
Q23076719 Q23299515
OR((Q27761623,P702,c(Q863908)), (Q24128899,P702,c(Q863908)))
action filter_type
action union
action find
entity Q27761623
relation P702
action find
entity Q24128899
relation P702
type Q863908
[ANSWERS]
{'OR': [['Q27761623', 'P702', {'concept': 'Q863908'}], ['Q24128899', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?h WHERE { { VALUES ( ?n ) { ( resource:Q24128899 ) ( resource:Q27761623 ) } . ?n property:P702 ?h } . ?h rdf:type ontology:Q863908 }
integral membrane protein TerC    EAE_08795 peptide ABC transporter ATP-binding protein    TM0074
And integral membrane protein TerC EAE 08795 and peptide ABC transporter ATP-binding protein TM0074 encode peptide ABC transporter ATP-binding protein TM0074 or integral membrane protein TerC EAE_08795
integral membrane protein TerC    EAE_08795 peptide ABC transporter ATP-binding protein    TM0074
action filter_type
action union
action find
entity peptide ABC transporter ATP-binding protein    TM0074
relation encoded by
action find
entity integral membrane protein TerC    EAE_08795
relation encoded by
type nucleic acid sequence
{'OR': [['peptide ABC transporter ATP-binding protein    TM0074', 'encoded by', {'concept': 'nucleic acid sequence'}], ['integral membrane protein TerC    EAE_08795', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?h WHERE { { VALUES ( ?n ) { ( resource:integral_membrane_protein_TerC____EAE_08795 ) ( resource:peptide_ABC_transporter_ATP-binding_protein____TM0074 ) } . ?n property:encoded_by ?h } . ?h rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Direct)
Simple Question|Mult. Entity|Indirect
Q23076719 Q23299515
P703
Q631147
USER
Which taxon do integral membrane protein TerC    EAE_08795 and peptide ABC transporter ATP-binding protein    TM0074 belong to ?
(Q23076719,P703,c(Q631147)) (Q23299515,P703,c(Q631147))
action union
action filter_type
action find
entity Q23076719
relation P703
type Q631147
action filter_type
action find
entity Q23299515
relation P703
type Q631147
['Q23076719', 'P703', {'concept': 'Q631147'}] ['Q23299515', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?o WHERE { { ?o rdf:type ontology:Q631147 . resource:Q23299515 property:P703 ?o } UNION { resource:Q23076719 property:P703 ?o . ?o rdf:type ontology:Q631147 } }
integral membrane protein TerC    EAE_08795 peptide ABC transporter ATP-binding protein    TM0074
action union
action filter_type
action find
entity integral membrane protein TerC    EAE_08795
relation found in taxon
type infraspecific name
action filter_type
action find
entity peptide ABC transporter ATP-binding protein    TM0074
relation found in taxon
type infraspecific name
['integral membrane protein TerC    EAE_08795', 'found in taxon', {'concept': 'infraspecific name'}] ['peptide ABC transporter ATP-binding protein    TM0074', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?o WHERE { { ?o rdf:type ontology:infraspecific_name . resource:peptide_ABC_transporter_ATP-binding_protein____TM0074 property:found_in_taxon ?o } UNION { resource:integral_membrane_protein_TerC____EAE_08795 property:found_in_taxon ?o . ?o rdf:type ontology:infraspecific_name } }
[]
infraspecific name
Q21102927 Q21102991
SYSTEM
Enterobacter aerogenes KCTC 2190, Thermotoga maritima MSB8
Q21102927 Q21102991
(Q23076719,P703,c(Q631147)) (Q23299515,P703,c(Q631147))
action union
action filter_type
action find
entity Q23076719
relation P703
type Q631147
action filter_type
action find
entity Q23299515
relation P703
type Q631147
[ANSWERS] integral membrane protein TerC EAE_08795 and peptide ABC transporter ATP-binding protein TM0074 belong to
['Q23076719', 'P703', {'concept': 'Q631147'}] ['Q23299515', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?o WHERE { { ?o rdf:type ontology:Q631147 . resource:Q23299515 property:P703 ?o } UNION { resource:Q23076719 property:P703 ?o . ?o rdf:type ontology:Q631147 } }
Enterobacter aerogenes KCTC 2190 Thermotoga maritima MSB8
Enterobacter aerogenes KCTC 2190 and Thermotoga maritima MSB8 integral membrane protein TerC EAE_08795 and peptide ABC transporter ATP-binding protein TM0074 belong to
Enterobacter aerogenes KCTC 2190 Thermotoga maritima MSB8
action union
action filter_type
action find
entity integral membrane protein TerC    EAE_08795
relation found in taxon
type infraspecific name
action filter_type
action find
entity peptide ABC transporter ATP-binding protein    TM0074
relation found in taxon
type infraspecific name
['integral membrane protein TerC    EAE_08795', 'found in taxon', {'concept': 'infraspecific name'}] ['peptide ABC transporter ATP-binding protein    TM0074', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?o WHERE { { ?o rdf:type ontology:infraspecific_name . resource:peptide_ABC_transporter_ATP-binding_protein____TM0074 property:found_in_taxon ?o } UNION { resource:integral_membrane_protein_TerC____EAE_08795 property:found_in_taxon ?o . ?o rdf:type ontology:infraspecific_name } }
[]
Clarification
Simple Question|Single Entity|Indirect
Q23076719
P688
Q181394
USER
What does that nucleic acid sequence encode ?
(Q23076719,P688,c(Q181394))
action filter_type
action find
entity Q23076719
relation P688
type Q181394
['Q23076719', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?u WHERE { resource:Q23076719 property:P688 ?u . ?u rdf:type ontology:Q181394 }
integral membrane protein TerC    EAE_08795
action filter_type
action find
entity integral membrane protein TerC    EAE_08795
relation encodes
type nutrient
['integral membrane protein TerC    EAE_08795', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?u WHERE { resource:integral_membrane_protein_TerC____EAE_08795 property:encodes ?u . ?u rdf:type ontology:nutrient }
[]
nutrient
Clarification for simple ques.
Q23076719
SYSTEM
Did you mean integral membrane protein TerC    EAE_08795 ?
Q21102927 Q21102991
(Q21102927,P688,c(Q181394)) (Q21102991,P688,c(Q181394))
[ANSWER]
['Q21102927', 'P688', {'concept': 'Q181394'}] ['Q21102991', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?u WHERE { resource:Q23076719 property:P688 ?u . ?u rdf:type ontology:Q181394 }
Enterobacter aerogenes KCTC 2190 Thermotoga maritima MSB8
Did you mean integral membrane protein TerC    EAE_08795 ?
integral membrane protein TerC    EAE_08795
['Enterobacter aerogenes KCTC 2190', 'encodes', {'concept': 'nutrient'}] ['Thermotoga maritima MSB8', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?u WHERE { resource:integral_membrane_protein_TerC____EAE_08795 property:encodes ?u . ?u rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
USER
Yes
(Q23076719,P688,c(Q181394))
['Q23076719', 'P688', {'concept': 'Q181394'}]
['integral membrane protein TerC    EAE_08795', 'encodes', {'concept': 'nutrient'}]
[]
Q24128899
SYSTEM
integral membrane protein TerC    EAE_08795
Q24128899
(Q23076719,P688,c(Q181394))
action filter_type
action find
entity Q23076719
relation P688
type Q181394
That nucleic acid sequence encodes an integral membrane protein TerC EAE 08795
['Q23076719', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?u WHERE { resource:Q23076719 property:P688 ?u . ?u rdf:type ontology:Q181394 }
integral membrane protein TerC    EAE_08795
That nucleic acid sequence encodes an integral membrane protein TerC EAE 08795
integral membrane protein TerC    EAE_08795
action filter_type
action find
entity integral membrane protein TerC    EAE_08795
relation encodes
type nutrient
['integral membrane protein TerC    EAE_08795', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?u WHERE { resource:integral_membrane_protein_TerC____EAE_08795 property:encodes ?u . ?u rdf:type ontology:nutrient }
[]
Verification (Boolean) (All)
Verification|2 entities, both direct
Q24128899 Q21102927
P703
Q631147
USER
Does integral membrane protein TerC    EAE_08795 belong to Enterobacter aerogenes KCTC 2190 ?
(Q24128899,P703,Q21102927)
action is_in
entity Q21102927
action find
entity Q24128899
relation P703
['Q24128899', 'P703', 'Q21102927']
ASK WHERE { resource:Q24128899 property:P703 resource:Q21102927 }
integral membrane protein TerC    EAE_08795 Enterobacter aerogenes KCTC 2190
action is_in
entity Enterobacter aerogenes KCTC 2190
action find
entity integral membrane protein TerC    EAE_08795
relation found in taxon
['integral membrane protein TerC    EAE_08795', 'found in taxon', 'Enterobacter aerogenes KCTC 2190']
ASK WHERE { resource:integral_membrane_protein_TerC____EAE_08795 property:found_in_taxon resource:Enterobacter_aerogenes_KCTC_2190 }
[]
infraspecific name
SYSTEM
YES
(Q24128899,P703,Q21102927)
action is_in
entity Q21102927
action find
entity Q24128899
relation P703
[ANSWER]
['Q24128899', 'P703', 'Q21102927']
ASK WHERE { resource:Q24128899 property:P703 resource:Q21102927 }
Yes
action is_in
entity Enterobacter aerogenes KCTC 2190
action find
entity integral membrane protein TerC    EAE_08795
relation found in taxon
['integral membrane protein TerC    EAE_08795', 'found in taxon', 'Enterobacter aerogenes KCTC 2190']
ASK WHERE { resource:integral_membrane_protein_TerC____EAE_08795 property:found_in_taxon resource:Enterobacter_aerogenes_KCTC_2190 }
[]
Logical Reasoning (All)
Logical|Union|Single_Relation
Q24278537 Q27761623
P702
Q863908
USER
Which nucleic acid sequences encodes peptide ABC transporter ATP-binding protein    TM0074 or putative tail fiber chaperone, Qin prophage    O3K_14075 ?
OR((Q27761623,P702,c(Q863908)), (Q24278537,P702,c(Q863908)))
action filter_type
action union
action find
entity Q27761623
relation P702
action find
entity Q24278537
relation P702
type Q863908
{'OR': [['Q27761623', 'P702', {'concept': 'Q863908'}], ['Q24278537', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?s WHERE { { VALUES ( ?d ) { ( resource:Q27761623 ) ( resource:Q24278537 ) } . ?d property:P702 ?s } . ?s rdf:type ontology:Q863908 }
putative tail fiber chaperone, Qin prophage    O3K_14075 peptide ABC transporter ATP-binding protein    TM0074
action filter_type
action union
action find
entity peptide ABC transporter ATP-binding protein    TM0074
relation encoded by
action find
entity putative tail fiber chaperone, Qin prophage    O3K_14075
relation encoded by
type nucleic acid sequence
{'OR': [['peptide ABC transporter ATP-binding protein    TM0074', 'encoded by', {'concept': 'nucleic acid sequence'}], ['putative tail fiber chaperone, Qin prophage    O3K_14075', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?s WHERE { { VALUES ( ?d ) { ( resource:peptide_ABC_transporter_ATP-binding_protein____TM0074 ) ( resource:putative_tail_fiber_chaperone,_Qin_prophage____O3K_14075 ) } . ?d property:encoded_by ?s } . ?s rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Q23299515 Q23112057
SYSTEM
peptide ABC transporter ATP-binding protein    TM0074, putative tail fiber chaperone, Qin prophage    O3K_14075
Q23299515 Q23112057
OR((Q27761623,P702,c(Q863908)), (Q24278537,P702,c(Q863908)))
action filter_type
action union
action find
entity Q27761623
relation P702
action find
entity Q24278537
relation P702
type Q863908
[ANSWERS]
{'OR': [['Q27761623', 'P702', {'concept': 'Q863908'}], ['Q24278537', 'P702', {'concept': 'Q863908'}]]}
SELECT DISTINCT ?s WHERE { { VALUES ( ?d ) { ( resource:Q27761623 ) ( resource:Q24278537 ) } . ?d property:P702 ?s } . ?s rdf:type ontology:Q863908 }
peptide ABC transporter ATP-binding protein    TM0074 putative tail fiber chaperone, Qin prophage    O3K_14075
Peptide ABC transporter ATP-binding protein TM0074 and putative tail fiber chaperone, Qin prophage O3K 14075 encode peptide ABC transporter ATP-binding protein TM0074 or putative tail fiber chaperone, Qin prophage O3K_14075
peptide ABC transporter ATP-binding protein    TM0074 putative tail fiber chaperone, Qin prophage    O3K_14075
action filter_type
action union
action find
entity peptide ABC transporter ATP-binding protein    TM0074
relation encoded by
action find
entity putative tail fiber chaperone, Qin prophage    O3K_14075
relation encoded by
type nucleic acid sequence
{'OR': [['peptide ABC transporter ATP-binding protein    TM0074', 'encoded by', {'concept': 'nucleic acid sequence'}], ['putative tail fiber chaperone, Qin prophage    O3K_14075', 'encoded by', {'concept': 'nucleic acid sequence'}]]}
SELECT DISTINCT ?s WHERE { { VALUES ( ?d ) { ( resource:peptide_ABC_transporter_ATP-binding_protein____TM0074 ) ( resource:putative_tail_fiber_chaperone,_Qin_prophage____O3K_14075 ) } . ?d property:encoded_by ?s } . ?s rdf:type ontology:nucleic_acid_sequence }
[]
Clarification
Simple Question|Single Entity|Indirect
Q23112057
P688
Q181394
USER
What does that nucleic acid sequence encode ?
(Q23112057,P688,c(Q181394))
action filter_type
action find
entity Q23112057
relation P688
type Q181394
['Q23112057', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?n WHERE { resource:Q23112057 property:P688 ?n . ?n rdf:type ontology:Q181394 }
putative tail fiber chaperone, Qin prophage    O3K_14075
action filter_type
action find
entity putative tail fiber chaperone, Qin prophage    O3K_14075
relation encodes
type nutrient
['putative tail fiber chaperone, Qin prophage    O3K_14075', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?n WHERE { resource:putative_tail_fiber_chaperone,_Qin_prophage____O3K_14075 property:encodes ?n . ?n rdf:type ontology:nutrient }
[]
nutrient
Clarification for simple ques.
Q23112057
SYSTEM
Did you mean putative tail fiber chaperone, Qin prophage    O3K_14075 ?
Q23299515 Q23112057
(Q23299515,P688,c(Q181394)) (Q23112057,P688,c(Q181394))
[ANSWER]
['Q23299515', 'P688', {'concept': 'Q181394'}] ['Q23112057', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?n WHERE { resource:Q23112057 property:P688 ?n . ?n rdf:type ontology:Q181394 }
peptide ABC transporter ATP-binding protein    TM0074 putative tail fiber chaperone, Qin prophage    O3K_14075
Did you mean putative tail fiber chaperone, Qin prophage    O3K_14075 ?
putative tail fiber chaperone, Qin prophage    O3K_14075
['peptide ABC transporter ATP-binding protein    TM0074', 'encodes', {'concept': 'nutrient'}] ['putative tail fiber chaperone, Qin prophage    O3K_14075', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?n WHERE { resource:putative_tail_fiber_chaperone,_Qin_prophage____O3K_14075 property:encodes ?n . ?n rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
USER
Yes
(Q23112057,P688,c(Q181394))
['Q23112057', 'P688', {'concept': 'Q181394'}]
['putative tail fiber chaperone, Qin prophage    O3K_14075', 'encodes', {'concept': 'nutrient'}]
[]
Q24278537
SYSTEM
putative tail fiber chaperone, Qin prophage    O3K_14075
Q24278537
(Q23112057,P688,c(Q181394))
action filter_type
action find
entity Q23112057
relation P688
type Q181394
That nucleic acid sequence encodes a putative tail fiber chaperone, Qin prophage O3K 14075
['Q23112057', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?n WHERE { resource:Q23112057 property:P688 ?n . ?n rdf:type ontology:Q181394 }
putative tail fiber chaperone, Qin prophage    O3K_14075
That nucleic acid sequence encodes a putative tail fiber chaperone, Qin prophage O3K 14075
putative tail fiber chaperone, Qin prophage    O3K_14075
action filter_type
action find
entity putative tail fiber chaperone, Qin prophage    O3K_14075
relation encodes
type nutrient
['putative tail fiber chaperone, Qin prophage    O3K_14075', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?n WHERE { resource:putative_tail_fiber_chaperone,_Qin_prophage____O3K_14075 property:encodes ?n . ?n rdf:type ontology:nutrient }
[]