Simple Question (Direct)
Simple Question
Q27551224
P681
Q15989253
USER
Which parts are the components of prohibitin subunit PHB2 YGR231C ?
(Q27551224,P681,c(Q15989253))
action filter_type
action find
entity Q27551224
relation P681
type Q15989253
['Q27551224', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?u WHERE { resource:Q27551224 property:P681 ?u . ?u rdf:type ontology:Q15989253 }
prohibitin subunit PHB2 YGR231C
action filter_type
action find
entity prohibitin subunit PHB2 YGR231C
relation cell component
type part
['prohibitin subunit PHB2 YGR231C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?u WHERE { resource:prohibitin_subunit_PHB2_YGR231C property:cell_component ?u . ?u rdf:type ontology:part }
[]
part
Q39572 Q14349455
SYSTEM
mitochondrion, membrane
Q39572 Q14349455
(Q27551224,P681,c(Q15989253))
action filter_type
action find
entity Q27551224
relation P681
type Q15989253
The [ANSWERS] are the components of prohibitin subunit PHB2 YGR231C
['Q27551224', 'P681', {'concept': 'Q15989253'}]
SELECT DISTINCT ?u WHERE { resource:Q27551224 property:P681 ?u . ?u rdf:type ontology:Q15989253 }
mitochondrion membrane
The mitochondrion and membrane are the components of prohibitin subunit PHB2 YGR231C
mitochondrion membrane
action filter_type
action find
entity prohibitin subunit PHB2 YGR231C
relation cell component
type part
['prohibitin subunit PHB2 YGR231C', 'cell component', {'concept': 'part'}]
SELECT DISTINCT ?u WHERE { resource:prohibitin_subunit_PHB2_YGR231C property:cell_component ?u . ?u rdf:type ontology:part }
[]
Simple Question (Direct)
Simple Question|Single Entity
Q27551224
P703
Q631147
USER
Where is prohibitin subunit PHB2 YGR231C found ?
(Q27551224,P703,c(Q631147))
action filter_type
action find
entity Q27551224
relation P703
type Q631147
['Q27551224', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?z WHERE { resource:Q27551224 property:P703 ?z . ?z rdf:type ontology:Q631147 }
prohibitin subunit PHB2 YGR231C
action filter_type
action find
entity prohibitin subunit PHB2 YGR231C
relation found in taxon
type infraspecific name
['prohibitin subunit PHB2 YGR231C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?z WHERE { resource:prohibitin_subunit_PHB2_YGR231C property:found_in_taxon ?z . ?z rdf:type ontology:infraspecific_name }
[]
infraspecific name
Q27510868
SYSTEM
Saccharomyces cerevisiae S288c
Q27510868
(Q27551224,P703,c(Q631147))
action filter_type
action find
entity Q27551224
relation P703
type Q631147
Prohibitin subunit PHB2 YGR231C is found in [ANSWER]
['Q27551224', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?z WHERE { resource:Q27551224 property:P703 ?z . ?z rdf:type ontology:Q631147 }
Saccharomyces cerevisiae S288c
Prohibitin subunit PHB2 YGR231C is found in Saccharomyces cerevisiae S288c
Saccharomyces cerevisiae S288c
action filter_type
action find
entity prohibitin subunit PHB2 YGR231C
relation found in taxon
type infraspecific name
['prohibitin subunit PHB2 YGR231C', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?z WHERE { resource:prohibitin_subunit_PHB2_YGR231C property:found_in_taxon ?z . ?z rdf:type ontology:infraspecific_name }
[]
Simple Question (Ellipsis)
only subject is changed, parent and predicate remains same
Q23202637
Q631147
USER
And also tell me about hypothetical protein    CBO1140?
(Q23202637,P703,c(Q631147))
action filter_type
action find
entity Q23202637
relation P703
type Q631147
['Q23202637', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:Q631147 . resource:Q23202637 property:P703 ?l }
hypothetical protein    CBO1140
action filter_type
action find
entity hypothetical protein    CBO1140
relation found in taxon
type infraspecific name
['hypothetical protein    CBO1140', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:infraspecific_name . resource:hypothetical_protein____CBO1140 property:found_in_taxon ?l }
[]
infraspecific name
Q21102975
SYSTEM
Clostridium botulinum A str. ATCC 3502
Q21102975
(Q23202637,P703,c(Q631147))
action filter_type
action find
entity Q23202637
relation P703
type Q631147
[ANSWER]
['Q23202637', 'P703', {'concept': 'Q631147'}]
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:Q631147 . resource:Q23202637 property:P703 ?l }
Clostridium botulinum A str. ATCC 3502
Clostridium botulinum A str. ATCC 3502
action filter_type
action find
entity hypothetical protein    CBO1140
relation found in taxon
type infraspecific name
['hypothetical protein    CBO1140', 'found in taxon', {'concept': 'infraspecific name'}]
SELECT DISTINCT ?l WHERE { ?l rdf:type ontology:infraspecific_name . resource:hypothetical_protein____CBO1140 property:found_in_taxon ?l }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q14818018 Q27510868
P682 P703
Q181394
USER
Which nutrients species belongs to the taxon Saccharomyces cerevisiae S288c and are involved in cellular response to DNA damage stimulus ?
AND((c(Q181394),P703,Q27510868), (c(Q181394),P682,Q14818018))
action filter_type
action intersection
action find_reverse
entity Q27510868
relation P703
action find_reverse
entity Q14818018
relation P682
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P703', 'Q27510868'], [{'concept': 'Q181394'}, 'P682', 'Q14818018']]}
SELECT DISTINCT ?w WHERE { ?w property:P682 resource:Q14818018 . ?w property:P703 resource:Q27510868 . ?w rdf:type ontology:Q181394 }
cellular response to DNA damage stimulus Saccharomyces cerevisiae S288c
action filter_type
action intersection
action find_reverse
entity Saccharomyces cerevisiae S288c
relation found in taxon
action find_reverse
entity cellular response to DNA damage stimulus
relation biological process
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'found in taxon', 'Saccharomyces cerevisiae S288c'], [{'concept': 'nutrient'}, 'biological process', 'cellular response to DNA damage stimulus']]}
SELECT DISTINCT ?w WHERE { ?w property:biological_process resource:cellular_response_to_DNA_damage_stimulus . ?w property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c . ?w rdf:type ontology:nutrient }
[]
nutrient
Q27551884 Q27551894 Q27548653 Q27552529 Q27552056 Q27549918 Q27550610 Q27550675 Q27548640 Q27549330
SYSTEM
Some of them are Mkt1p YNL085W, H3 histone acetyltransferase RTT109 YLL002W, Ctk2p YJL006C, recombinase RAD52 YML032C, Tos4p YLR183C, Mig3p YER028C, casein kinase 2 catalytic subunit CKA2 YOR061W, DNA-directed RNA polymerase II core subunit RPB9 YGL070C, protein kinase MEC1 YBR136W, Smc5-Smc6 complex subunit NSE4 YDL105W
Q27548561 Q27548373 Q27549903 Q27552081 Q27552082 Q27552087 Q27548683 Q27552973 Q27548689 Q27552487 Q27551863 Q27550414 Q27550140 Q27550141 Q27552179 Q27552178 Q27550658 Q27552116 Q27552366 Q27551142 Q27549272 Q27551190 Q27553074 Q27550547 Q27550715 Q27553162 Q27547621 Q27549370 Q27551669 Q27547535 Q27550491 Q27549379 Q27551119 Q27550737 Q27549713 Q27552097 Q27547801 Q27551296 Q27552964 Q27552962 Q27549978 Q27552860 Q27549369 Q27550175 Q27551911 Q27547438 Q27549363 Q27551268 Q27551615 Q27552246 Q27552412 Q27551188 Q27549478 Q27547958 Q27547984 Q27549261 Q27547864 Q27552952 Q27551123 Q27547392 Q27547391 Q27551688 Q27551689 Q27549492 Q27550675 Q27549257 Q27552386 Q27548145 Q27551920 Q27548065 Q27547642 Q27547258 Q27548640 Q27547926 Q27549560 Q27551609 Q27548712 Q27549426 Q27549424 Q27551330 Q27548081 Q27551035 Q27548643 Q27547869 Q27551037 Q27548089 Q27549330 Q27552824 Q27549958 Q27553080 Q27553081 Q27550579 Q27547413 Q27547891 Q27551631 Q27550144 Q27548010 Q27549301 Q27549557 Q27549555 Q27548669 Q27548499 Q27551209 Q27553071 Q27551734 Q27551735 Q27548725 Q27553126 Q27548231 Q27548439 Q27547871 Q27549945 Q27547359 Q27551786 Q27550228 Q27553241 Q27548043 Q27548005 Q27550225 Q27548653 Q27550610 Q27547624 Q27549629 Q27548124 Q27550180 Q27551708 Q27547371 Q27547370 Q27548552 Q27553034 Q27552529 Q27549523 Q27548422 Q27549697 Q27551151 Q27547273 Q27547682 Q27552190 Q27552846 Q27547288 Q27548931 Q27547411 Q27552202 Q27547670 Q27549321 Q27547327 Q27552209 Q27549329 Q27548121 Q27549438 Q27552354 Q27552357 Q27548136 Q27549307 Q27551894 Q27547741 Q27548454 Q27547885 Q27548114 Q27547691 Q27551366 Q27551809 Q27551155 Q27552222 Q27549193 Q27553101 Q27549190 Q27552747 Q27552212 Q27552056 Q27551254 Q27549199 Q27551091 Q27550432 Q27550430 Q27550008 Q27550521 Q27547445 Q27551884 Q27548538 Q27547358 Q27549441 Q27547345 Q27548599 Q27552784 Q27549918 Q27548590 Q27547593 Q27548618 Q27552900 Q27550609 Q27551904 Q27548292 Q27550152 Q27550407 Q27550156 Q27547450 Q27550310 Q27547991 Q27550550 Q27550483 Q27552570 Q27548508 Q27550485 Q27549253
AND((c(Q181394),P703,Q27510868), (c(Q181394),P682,Q14818018))
action filter_type
action intersection
action find_reverse
entity Q27510868
relation P703
action find_reverse
entity Q14818018
relation P682
type Q181394
[ANSWERS] belong to the taxon Saccharomyces cerevisiae S288c and are involved in cellular response to DNA damage stimulus
{'AND': [[{'concept': 'Q181394'}, 'P703', 'Q27510868'], [{'concept': 'Q181394'}, 'P682', 'Q14818018']]}
SELECT DISTINCT ?w WHERE { ?w property:P682 resource:Q14818018 . ?w property:P703 resource:Q27510868 . ?w rdf:type ontology:Q181394 }
Eaf6p YJR082C SCF ubiquitin ligase complex subunit HRT1 YOL133W Cmr1p YDL156W DNA helicase SRS2 YJL092W deoxycytidyl transferase YOR346W Rad14p YMR201C RuvB family ATP-dependent DNA helicase pontin YDR190C formin-binding protein HOF1 YMR032W DNA helicase PIF1 YML061C Ies2p YNL215W serine/threonine protein kinase CHK1 YBR274W nucleoside diphosphate kinase YKL067W proliferating cell nuclear antigen YBR088C Rrm3p YHR031C Shu2p YDR078C Shu1p YHL006C cyclin-dependent serine/threonine-protein kinase PHO85 YPL031C Lcd1p YDR499W ribonucleotide reductase inhibiting protein SML1 YML058W Plm2p YDR501W chromatin-remodeling protein SPT16 YGL207W Eaf1p YDR359C DNA 5'-adenosine monophosphate hydrolase YOR258W histone H2A YBL003C Mus81p YDR386W mismatch repair protein MSH3 YCR092C mismatch repair protein MLH3 YPL164C Rad23p YEL037C methylated-DNA--protein-cysteine methyltransferase YDL200C TFIIH/NER complex subunit TFB1 YDR311W DNA-directed RNA polymerase II subunit RPB4 YJL140W high-mobility group nucleosome-binding protein YBR089C-A ATP-dependent 3'-5' DNA helicase YDR291W mismatch repair ATPase MSH2 YOL090W casein kinase 2 regulatory subunit CKB2 YOR039W Mms22p YLR320W Rad28p YDR030C transcriptional modulator YOR229W ssDNA endodeoxyribonuclease RAD2 YGR258C Swc4p YGR002C Eaf7p YNL136W DNA helicase RAD5 YLR032W DNA-binding protein SAW1 YAL027W RuvB family ATP-dependent DNA helicase reptin YPL235W crossover junction endodeoxyribonuclease YER041W Slx4p YLR135W putative DNA-dependent ATPase RAD55 YDR076W Blm10p YFL007W Rev7p YIL139C Psy2p YNL201C polynucleotide 3'-phosphatase YMR156C Sae3p YHR079C-A Tof1p YNL273W Mag1p YER142C E3 ubiquitin-protein ligase PRP19 YLL036C DNA ligase (ATP) DNL4 YOR005C Mhf1p YOL086W-A Smc5-Smc6 complex subunit NSE3 YDR288W TFIIH complex subunit TFB5 YDR079C-A chromatin-binding protein BDF1 YLR399C Xrs2p YDR369C protein kinase ALK2 YBL009W cullin RTT101 YJL047C SUMO-targeted ubiquitin ligase complex subunit SLX8 YER116C DNA-directed RNA polymerase II core subunit RPB9 YGL070C kleisin alpha YDL003W Nup84p YDL116W Ddc1p YPL194W ATP-dependent DNA helicase SGS1 YMR190C Mec3p YLR288C endonuclease YBR228W MutS family protein MSH5 YDL154W protein kinase MEC1 YBR136W Dcc1p YCL016C Rtt107p YHR154W E2 ubiquitin-conjugating protein MMS2 YGL087C DNA-(apurinic or apyrimidinic site) lyase APN2 YBL019W 3'-5' DNA helicase YIR002C ssDNA endodeoxyribonuclease RAD1 YPL022W SUMO ligase MMS21 YEL019C mismatch repair ATPase MSH1 YHR120W Rad17p YOR368W Ump1p YBR173C SUMO-targeted ubiquitin ligase complex subunit SLX5 YDL013W NAD-dependent histone deacetylase SIR2 YDL042C DNA-dependent ATPase RAD54 YGL163C Smc5-Smc6 complex subunit NSE4 YDL105W E3 ubiquitin-protein ligase RAD18 YCR066W Arp4p YJL081C MRX complex nuclease subunit YMR224C cyclin-dependent serine/threonine protein kinase CTK1 YKL139W SUMO ligase CST9 YLR394W high-mobility group nucleosome-binding protein YPR052C Mms4p YBR098W Rad34p YDR314C exodeoxyribonuclease DIN7 YDR263C 8-oxoguanine glycosylase OGG1 YML060W FACT complex subunit POB3 YML069W phosphatidylinositol kinase-related protein kinase TOR1 YJR066W Ddr2p YOL052C-A Rad2 family nuclease EXO1 YOR033C DNA ligase (ATP) CDC9 YDL164C Smc5-Smc6 complex subunit NSE5 YML023C MCM DNA helicase complex subunit MCM2 YBL023C putative DNA-dependent ATPase RAD57 YDR004W DNA damage-responsive RNA polymerase-degradation factor DEF1 YKL054C E1 ubiquitin-activating protein AOS1 YPR180W Bdf2p YDL070W DNA repair protein SMC6 YLR383W chromatin-binding protein RAD9 YDR217C Ctk3p YML112W Mms1p YPR164W DNA repair protein RAD16 YBR114W Csm2p YIL132C DNA-binding protein kinase TEL1 YBL088C Psy3p YLR376C histone H2A YDR225W Npl6p YMR091C Csm3p YMR048W Ctk2p YJL006C casein kinase 2 catalytic subunit CKA2 YOR061W DNA-binding protein ABF1 YKL112W serine/threonine protein kinase HRR25 YPL204W TFIIH/NER complex ATPase/helicase subunit SSL2 YIL143C Pso2p YMR137C protein kinase ALK1 YGL021W Hed1p YDR014W-A Rad33p YML011C DNA-(apurinic or apyrimidinic site) lyase APN1 YKL114C Hug1p YML058W-A recombinase RAD52 YML032C Yim1p YMR152W Rts2p YOR077W uracil-DNA glycosylase YML021C Yaf9p YNL107W Mgm101p YJR144W E2 ubiquitin-conjugating protein RAD6 YGL058W E1 ubiquitin-activating protein UBA1 YKL210W histone acetyltransferase YNG2 YHR090C Ies4p YOR189W metalloendopeptidase WSS1 YHR134W bifunctional N-glycosylase/AP lyase NTG2 YOL043C mismatch repair ATPase MLH1 YMR167W bifunctional ATP-dependent DNA helicase/ssDNA endodeoxyribonuclease DNA2 YHR164C Epl1p YFL024C Lif1p YGL090W DNA-dependent ATPase RAD26 YJR035W chromatin-remodeling ATPase INO80 YGL150C SCF ubiquitin ligase complex subunit GRR1 YJR090C mismatch repair protein MLH2 YLR035C ATP-dependent DNA helicase YKU70 YMR284W DNA repair ATPase SMC5 YOL034W ATP-binding mismatch repair protein YNL082W Met18p YIL128W H3 histone acetyltransferase RTT109 YLL002W Smc5-Smc6 complex subunit KRE29 YER038C DNA-dependent ATPase FUN30 YAL019W multifunctional nuclease RAD27 YKL113C Mlp1p YKR095W TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3 YER171W TFIIH/NER complex subunit TFB4 YPR056W ssDNA endodeoxyribonuclease SAE2 YGL175C Mhf2p YDL160C-A Him1p YDR317W TFIIH/NER complex subunit TFB2 YPL122C serine/threonine protein kinase DUN1 YDL101C Rev3p YPL167C ATP-dependent DNA helicase YKU80 YMR106C bifunctional N-glycosylase/AP lyase NTG1 YAL015C Tos4p YLR183C DNA-directed DNA polymerase eta YDR419W ATP-dependent 3'-5' DNA helicase YOL095C casein kinase 2 catalytic subunit CKA1 YIL035C Rad24p YER173W Hpr1p YDR138W SCF ubiquitin ligase complex subunit UFO1 YML088W Eaf5p YEL018W DNA-dependent ATPase RDH54 YBR073W Mkt1p YNL085W Nej1p YLR265C Eaf3p YPR023C serine/threonine/tyrosine protein kinase RAD53 YPL153C Arp8p YOR141C TFIIH/NER complex subunit SSL1 YLR005W Htl1p YCR020W-B Mig3p YER028C Mei5p YPL121C recombinase RAD51 YER095W Rad4p YER162C Hsm3p YBR272C casein kinase 2 regulatory subunit CKB1 YGL019W histone acetyltransferase catalytic subunit HAT1 YPL001W mismatch repair ATPase MSH6 YDR097C DNA-directed DNA polymerase IV YCR014C deoxyribodipyrimidine photo-lyase PHR1 YOR386W tyrosyl-DNA phosphodiesterase 1 YBR223C Smc5-Smc6 complex subunit NSE1 YLR007W Bud25p YER014C-A MRX complex DNA-binding subunit YNL250W Rmi1p YPL024W cohesin-loading factor complex subunit SCC2 YDR180W Hsp30p YCR021C Rad59p YDL059C Rad10p YML095C UV-damaged DNA-binding protein RAD7 YJR052W
Mkt1p YNL085W, H3 histone acetyltransferase RTT109 YLL002W, Ctk2p YJL006C, recombinase RAD52 YML032C, Tos4p YLR183C, Mig3p YER028C, casein kinase 2 catalytic subunit CKA2 YOR061W, DNA-directed RNA polymerase II core subunit RPB9 YGL070C, protein kinase MEC1 YBR136W and Smc5-Smc6 complex subunit NSE4 YDL105W belong to the taxon Saccharomyces cerevisiae S288c and are involved in cellular response to DNA damage stimulus
Mkt1p YNL085W H3 histone acetyltransferase RTT109 YLL002W Ctk2p YJL006C recombinase RAD52 YML032C Tos4p YLR183C Mig3p YER028C casein kinase 2 catalytic subunit CKA2 YOR061W DNA-directed RNA polymerase II core subunit RPB9 YGL070C protein kinase MEC1 YBR136W Smc5-Smc6 complex subunit NSE4 YDL105W
action filter_type
action intersection
action find_reverse
entity Saccharomyces cerevisiae S288c
relation found in taxon
action find_reverse
entity cellular response to DNA damage stimulus
relation biological process
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'found in taxon', 'Saccharomyces cerevisiae S288c'], [{'concept': 'nutrient'}, 'biological process', 'cellular response to DNA damage stimulus']]}
SELECT DISTINCT ?w WHERE { ?w property:biological_process resource:cellular_response_to_DNA_damage_stimulus . ?w property:found_in_taxon resource:Saccharomyces_cerevisiae_S288c . ?w rdf:type ontology:nutrient }
[]
Clarification
Simple Question|Single Entity|Indirect
Q27548653
P702
Q863908
USER
What encodes that nutrient ?
(Q27548653,P702,c(Q863908))
action filter_type
action find
entity Q27548653
relation P702
type Q863908
['Q27548653', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { resource:Q27548653 property:P702 ?e . ?e rdf:type ontology:Q863908 }
Ctk2p YJL006C
action filter_type
action find
entity Ctk2p YJL006C
relation encoded by
type nucleic acid sequence
['Ctk2p YJL006C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { resource:Ctk2p_YJL006C property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
nucleic acid sequence
Clarification for simple ques.
Q27552056
SYSTEM
Did you mean Tos4p YLR183C ?
Q27551884 Q27551894 Q27548653 Q27552529 Q27552056 Q27549918 Q27550610 Q27550675 Q27548640 Q27549330
(Q27551884,P702,c(Q863908)) (Q27551894,P702,c(Q863908)) (Q27548653,P702,c(Q863908)) (Q27552529,P702,c(Q863908)) (Q27552056,P702,c(Q863908)) (Q27549918,P702,c(Q863908)) (Q27550610,P702,c(Q863908)) (Q27550675,P702,c(Q863908)) (Q27548640,P702,c(Q863908)) (Q27549330,P702,c(Q863908))
[ANSWER]
['Q27551884', 'P702', {'concept': 'Q863908'}] ['Q27551894', 'P702', {'concept': 'Q863908'}] ['Q27548653', 'P702', {'concept': 'Q863908'}] ['Q27552529', 'P702', {'concept': 'Q863908'}] ['Q27552056', 'P702', {'concept': 'Q863908'}] ['Q27549918', 'P702', {'concept': 'Q863908'}] ['Q27550610', 'P702', {'concept': 'Q863908'}] ['Q27550675', 'P702', {'concept': 'Q863908'}] ['Q27548640', 'P702', {'concept': 'Q863908'}] ['Q27549330', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { resource:Q27548653 property:P702 ?e . ?e rdf:type ontology:Q863908 }
Mkt1p YNL085W H3 histone acetyltransferase RTT109 YLL002W Ctk2p YJL006C recombinase RAD52 YML032C Tos4p YLR183C Mig3p YER028C casein kinase 2 catalytic subunit CKA2 YOR061W DNA-directed RNA polymerase II core subunit RPB9 YGL070C protein kinase MEC1 YBR136W Smc5-Smc6 complex subunit NSE4 YDL105W
Did you mean Tos4p YLR183C ?
Tos4p YLR183C
['Mkt1p YNL085W', 'encoded by', {'concept': 'nucleic acid sequence'}] ['H3 histone acetyltransferase RTT109 YLL002W', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Ctk2p YJL006C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['recombinase RAD52 YML032C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Tos4p YLR183C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Mig3p YER028C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['casein kinase 2 catalytic subunit CKA2 YOR061W', 'encoded by', {'concept': 'nucleic acid sequence'}] ['DNA-directed RNA polymerase II core subunit RPB9 YGL070C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['protein kinase MEC1 YBR136W', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Smc5-Smc6 complex subunit NSE4 YDL105W', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { resource:Ctk2p_YJL006C property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
Simple Question (Coreferenced)
USER
No, I meant Ctk2p YJL006C. Could you tell me the answer for that?
(Q27548653,P702,c(Q863908))
Q27548653
['Q27548653', 'P702', {'concept': 'Q863908'}]
['Ctk2p YJL006C', 'encoded by', {'concept': 'nucleic acid sequence'}]
[]
Q27541638
SYSTEM
Ctk2p YJL006C
Q27541638
(Q27548653,P702,c(Q863908))
action filter_type
action find
entity Q27548653
relation P702
type Q863908
[ANSWER] encodes that nutrient
['Q27548653', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?e WHERE { resource:Q27548653 property:P702 ?e . ?e rdf:type ontology:Q863908 }
Ctk2p YJL006C
Ctk2p YJL006C encodes that nutrient
Ctk2p YJL006C
action filter_type
action find
entity Ctk2p YJL006C
relation encoded by
type nucleic acid sequence
['Ctk2p YJL006C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?e WHERE { resource:Ctk2p_YJL006C property:encoded_by ?e . ?e rdf:type ontology:nucleic_acid_sequence }
[]
Logical Reasoning (All)
Logical|Intersection|Multiple_Relation
Q14820680 Q39572
P682 P681
Q181394
USER
Which nutrients have mitochondrion as their cell component and are involved in transmembrane transport ?
AND((c(Q181394),P681,Q39572), (c(Q181394),P682,Q14820680))
action filter_type
action intersection
action find_reverse
entity Q39572
relation P681
action find_reverse
entity Q14820680
relation P682
type Q181394
{'AND': [[{'concept': 'Q181394'}, 'P681', 'Q39572'], [{'concept': 'Q181394'}, 'P682', 'Q14820680']]}
SELECT DISTINCT ?r WHERE { ?r property:P681 resource:Q39572 . ?r property:P682 resource:Q14820680 . ?r rdf:type ontology:Q181394 }
transmembrane transport mitochondrion
action filter_type
action intersection
action find_reverse
entity mitochondrion
relation cell component
action find_reverse
entity transmembrane transport
relation biological process
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'cell component', 'mitochondrion'], [{'concept': 'nutrient'}, 'biological process', 'transmembrane transport']]}
SELECT DISTINCT ?r WHERE { ?r property:cell_component resource:mitochondrion . ?r property:biological_process resource:transmembrane_transport . ?r rdf:type ontology:nutrient }
[]
nutrient
Q21113086 Q21121338 Q27553033 Q21498867 Q21986773 Q27548733 Q21106702 Q21115264 Q21991025 Q27549553
SYSTEM
Some of them are Choline transporter-like protein 1, Solute carrier family 25 member 36, Mmt2p YPL224C, ADP/ATP translocase 1, Sideroflexin-1, Oac1p YKL120W, Antigen peptide transporter 1, ATP-binding cassette sub-family B member 10, mitochondrial, Solute carrier family 25 member 47, Zn(2+) transporter ZRC1 YMR243C
Q21111583 Q21991780 Q27549003 Q21111224 Q21149713 Q21119538 Q21119536 Q27549827 Q21120718 Q21984951 Q21992681 Q21135095 Q21992682 Q27552414 Q14863583 Q27549375 Q27547331 Q27550499 Q21990615 Q27551981 Q21991610 Q27549507 Q27549642 Q27548302 Q27547973 Q21115206 Q14912816 Q21123415 Q21991023 Q27548873 Q21988722 Q21992385 Q21991097 Q21988728 Q21980015 Q21121332 Q22677323 Q21109032 Q425201 Q21121334 Q27547243 Q21121338 Q21496858 Q27552892 Q21983166 Q21107689 Q21494763 Q27551120 Q21984350 Q21110362 Q21110366 Q21118796 Q21988304 Q21984857 Q21984856 Q21991088 Q27551998 Q27549204 Q27551466 Q27552018 Q27551050 Q21121329 Q27553149 Q21121340 Q27548082 Q21121335 Q21115267 Q21115264 Q21115261 Q21991025 Q21111943 Q21988581 Q21113086 Q21991306 Q21494681 Q27547658 Q27547307 Q21433500 Q27550359 Q27552532 Q21991032 Q21991031 Q27549789 Q21990596 Q27550904 Q21990618 Q21990591 Q21986771 Q21121772 Q21990269 Q21133857 Q21119487 Q21137092 Q27548195 Q27551536 Q21121331 Q6414726 Q22683551 Q22683554 Q27547574 Q21104974 Q21133152 Q21991028 Q27550345 Q27547467 Q21100300 Q27549467 Q21991027 Q27553033 Q21991029 Q21491067 Q27549754 Q21209343 Q21421556 Q21984717 Q21986767 Q27549056 Q21106702 Q21135444 Q27550155 Q21991613 Q21986292 Q21135443 Q21113670 Q21498867 Q21992246 Q21118800 Q21497095 Q21125484 Q27547368 Q27547471 Q21113668 Q27553234 Q27549200 Q27548524 Q27551652 Q21113663 Q21986770 Q21498120 Q21986772 Q21986773 Q27550045 Q21498127 Q21118194 Q21108929 Q21141966 Q21121401 Q21121407 Q21123420 Q27548906 Q21123422 Q27549553 Q27550163 Q27553107 Q21130485 Q21115243 Q21984952 Q21984953 Q27549216 Q27550637 Q21136331 Q21990101 Q21130626 Q27549609 Q27548733 Q21985755 Q21988350 Q27552866 Q21121412 Q21491070 Q21121416 Q21990853 Q4650077 Q21121419 Q21115754 Q21142289 Q21495731 Q21135897 Q27552627 Q21496855 Q21174224 Q2356259 Q27550094 Q21135948 Q21113683 Q21121319 Q15330604 Q21141062 Q27551163 Q21491074 Q21101474
AND((c(Q181394),P681,Q39572), (c(Q181394),P682,Q14820680))
action filter_type
action intersection
action find_reverse
entity Q39572
relation P681
action find_reverse
entity Q14820680
relation P682
type Q181394
[ANSWERS] have mitochondrion as their cell component and are involved in transmembrane transport
{'AND': [[{'concept': 'Q181394'}, 'P681', 'Q39572'], [{'concept': 'Q181394'}, 'P682', 'Q14820680']]}
SELECT DISTINCT ?r WHERE { ?r property:P681 resource:Q39572 . ?r property:P682 resource:Q14820680 . ?r rdf:type ontology:Q181394 }
Calcium-binding mitochondrial carrier protein SCaMC-3 Antigen peptide transporter 1 hypothetical protein YMR221C ADP/ATP translocase 1 Voltage-dependent anion-selective channel protein 2 Sodium/calcium exchanger 3 Sodium/calcium exchanger 1 amino acid transporter BAP3 YDR046C Solute carrier family 25 member 48 ATP-binding cassette sub-family B member 7, mitochondrial Voltage-dependent anion-selective channel protein 3 Mitochondrial import receptor subunit TOM40 homolog Voltage-dependent anion-selective channel protein 1 porin POR1 YNL055C Apoptosis regulator Bcl-2 ATP-binding cassette Fe/S cluster precursor transporter ATM1 YMR301C NAD+ transporter YIL006W Ggc1p YDL198C Mitochondrial sodium/hydrogen exchanger 9B2 putative ammonium permease ATO3 YDR384C Calcium-binding mitochondrial carrier protein SCaMC-2 Fsf1p YOR271C hypothetical protein YFR045W hexose transporter HXT7 YDR342C mitochondrial 2-oxodicarboxylate carrier YPL134C ATP-binding cassette sub-family B member 7, mitochondrial ATP-binding cassette sub-family D member 1 Sodium/hydrogen exchanger 1 Solute carrier family 25 member 43 amino acid transporter AGC1 YPR021C Sodium/potassium/calcium exchanger 6, mitochondrial Mitochondrial import receptor subunit TOM40B S-adenosylmethionine mitochondrial carrier protein NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 Multidrug resistance-associated protein 9 Solute carrier family 25 member 41 ADP/ATP translocase 3 Sodium/potassium/calcium exchanger 6, mitochondrial Apoptosis regulator Bcl-2 Solute carrier family 25 member 40 putative flavin adenine dinucleotide transporter YGL139W Solute carrier family 25 member 36 ADP/ATP translocase 4 Mme1p YMR166C Mitochondrial dicarboxylate carrier 2-5A-dependent ribonuclease ATP-binding cassette sub-family A member 9 Rim2p YBR192W ATP-binding cassette sub-family B member 10, mitochondrial Mitochondrial glutamate carrier 2 Mitochondrial glutamate carrier 1 Multidrug resistance-associated protein 9 Monocarboxylate transporter 1 Mitochondrial glutamate carrier 2 Mitochondrial glutamate carrier 1 Adenosine 3'-phospho 5'-phosphosulfate transporter 2 Hol1p YNR055C putative porin POR2 YIL114C thiamine transporter TPC1 YGR096W Hxt14p YNL318C Mir1p YJR077C Mitochondrial coenzyme A transporter SLC25A42 metal cation transporter COT1 YOR316C Solute carrier family 25 member 44 Ady2p YCR010C Solute carrier family 25 member 43 ATP-binding cassette sub-family B member 8, mitochondrial ATP-binding cassette sub-family B member 10, mitochondrial ATP-binding cassette sub-family B member 6, mitochondrial Solute carrier family 25 member 47 Calcium-binding mitochondrial carrier protein Aralar2 Protein spinster homolog 1 Choline transporter-like protein 1 Mitochondrial thiamine pyrophosphate carrier Kidney mitochondrial carrier protein 1 putative ATP-binding cassette multidrug transporter VMR1 YHL035C ADP/ATP carrier protein AAC1 YMR056C Graves disease carrier protein homolog lysine permease YNL268W Jen1p YKL217W Mitochondrial coenzyme A transporter SLC25A42 Solute carrier family 25 member 45 hexose transporter HXT10 YFL011W Solute carrier family 22 member 4 hypothetical protein YPR011C Sodium/hydrogen exchanger 1 Solute carrier family 25 member 36 Sideroflexin-4 Mitochondrial 2-oxodicarboxylate carrier Mitochondrial import receptor subunit TOM40 homolog Tricarboxylate transport protein, mitochondrial Phosphate carrier protein, mitochondrial Translocase of outer mitochondrial membrane 40 homolog (Yeast), isoform CRA_c H(+)-exporting P2-type ATPase PMA1 YGL008C coenzyme A transporter YHR002W Solute carrier family 25 member 45 ATP-sensitive inward rectifier potassium channel 11 Peroxisomal membrane protein PMP34 Calcium-binding mitochondrial carrier protein Aralar1 Kha1p YJL094C ADP/ATP translocase 4 Voltage-dependent anion-selective channel protein 1 Solute carrier family 25 member 40 Sfc1p YJR095W hexose transporter HXT6 YDR343C Protein spinster homolog 1 organic acid transporter YBR104W Solute carrier family 25 member 44 Mmt2p YPL224C Solute carrier family 25 member 41 ATP-binding cassette sub-family D member 3 glutamine permease GNP1 YDR508C NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 Multidrug resistance protein 1B Phosphate carrier protein, mitochondrial Sideroflexin-3 Hem25p YDL119C Antigen peptide transporter 1 Calcium-binding mitochondrial carrier protein SCaMC-1 Na(+)-exporting P-type ATPase ENA2 YDR039C Calcium-binding mitochondrial carrier protein SCaMC-3 Peroxisomal membrane protein PMP34 Calcium-binding mitochondrial carrier protein SCaMC-2 ATP-binding cassette sub-family E member 1 ADP/ATP translocase 1 Tricarboxylate transport protein, mitochondrial Magnesium transporter MRS2 homolog, mitochondrial Voltage-dependent anion-selective channel protein 2 Mitochondrial thiamine pyrophosphate carrier Fe(2+) transporter YKR052C arginine permease CAN1 YEL063C ATP-binding cassette sub-family G member 1 flavin adenine dinucleotide transporter FLX1 YIL134W Mmt1p YMR177W Ca(2+)-binding ATP:ADP antiporter SAL1 YNL083W ADP/ATP carrier protein PET9 YBL030C ATP-binding cassette sub-family D member 3 Sideroflexin-5 Calcium-binding mitochondrial carrier protein Aralar1 Sideroflexin-2 Sideroflexin-1 Ctp1p YBR291C Calcium-binding mitochondrial carrier protein Aralar2 Graves disease carrier protein Mitochondrial basic amino acids transporter Voltage-dependent anion-selective channel protein 3 Sideroflexin-4 Sideroflexin-5 Mitochondrial sodium/hydrogen exchanger 9B2 putative sugar transporter YGL104C Sodium/hydrogen exchanger 6 Zn(2+) transporter ZRC1 YMR243C ATP-binding cassette permease MDL2 YPL270W Esbp6p YNL125C ADP/ATP translocase 2 ATP-binding cassette sub-family A member 9 ATP-binding cassette sub-family B member 8, mitochondrial ATP-binding cassette sub-family B member 6, mitochondrial ATP-binding cassette permease MDL1 YLR188W mitochondrial 2-oxodicarboxylate carrier YOR222W Mitochondrial import receptor subunit TOM40B Calcium-binding mitochondrial carrier protein SCaMC-1 Voltage-dependent anion-selective channel protein 2 ion-transporting P-type ATPase SPF1 YEL031W Oac1p YKL120W Mitochondrial basic amino acids transporter Sodium/calcium exchanger 3 ADP/ATP carrier protein AAC3 YBR085W Sideroflexin-2 ATP-binding cassette sub-family D member 2 Sideroflexin-3 Zinc transporter 6 ATP-binding cassette sub-family D member 1 Sideroflexin-1 Monocarboxylate transporter 1 Sideroflexin-1 Feline leukemia virus subgroup C receptor-related protein 1 Voltage-dependent anion-selective channel protein 3 Tna1p YGR260W ADP/ATP translocase 2 Tumor suppressor candidate 3 Gap junction alpha-1 protein NAD+ transporter YEL006W Solute carrier family 22 member 4 ATP-binding cassette sub-family G member 2 Solute carrier family 25 member 47 Gap junction alpha-1 protein ATP-binding cassette sub-family B member 7, mitochondrial Tom40p YMR203W ATP-binding cassette sub-family G member 2 Feline leukemia virus subgroup C receptor-related protein 1
Choline transporter-like protein 1, Solute carrier family 25 member 36, Mmt2p YPL224C, ADP/ATP translocase 1, Sideroflexin-1, Oac1p YKL120W, Antigen peptide transporter 1, ATP-binding cassette sub-family B member 10, mitochondrial, Solute carrier family 25 member 47 and Zn(2+) transporter ZRC1 YMR243C have mitochondrion as their cell component and are involved in transmembrane transport
Choline transporter-like protein 1 Solute carrier family 25 member 36 Mmt2p YPL224C ADP/ATP translocase 1 Sideroflexin-1 Oac1p YKL120W Antigen peptide transporter 1 ATP-binding cassette sub-family B member 10, mitochondrial Solute carrier family 25 member 47 Zn(2+) transporter ZRC1 YMR243C
action filter_type
action intersection
action find_reverse
entity mitochondrion
relation cell component
action find_reverse
entity transmembrane transport
relation biological process
type nutrient
{'AND': [[{'concept': 'nutrient'}, 'cell component', 'mitochondrion'], [{'concept': 'nutrient'}, 'biological process', 'transmembrane transport']]}
SELECT DISTINCT ?r WHERE { ?r property:cell_component resource:mitochondrion . ?r property:biological_process resource:transmembrane_transport . ?r rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
Simple Question|Mult. Entity
Q21113086 Q21121338 Q27553033 Q21498867 Q21986773 Q27548733 Q21106702 Q21115264 Q21991025 Q27549553
P702
Q863908
USER
What encodes those nutrients ?
(Q21113086,P702,c(Q863908)) (Q21121338,P702,c(Q863908)) (Q27553033,P702,c(Q863908)) (Q21498867,P702,c(Q863908)) (Q21986773,P702,c(Q863908)) (Q27548733,P702,c(Q863908)) (Q21106702,P702,c(Q863908)) (Q21115264,P702,c(Q863908)) (Q21991025,P702,c(Q863908)) (Q27549553,P702,c(Q863908))
action filter_type
action find
entity prev_answer
relation P702
type Q863908
['Q21113086', 'P702', {'concept': 'Q863908'}] ['Q21121338', 'P702', {'concept': 'Q863908'}] ['Q27553033', 'P702', {'concept': 'Q863908'}] ['Q21498867', 'P702', {'concept': 'Q863908'}] ['Q21986773', 'P702', {'concept': 'Q863908'}] ['Q27548733', 'P702', {'concept': 'Q863908'}] ['Q21106702', 'P702', {'concept': 'Q863908'}] ['Q21115264', 'P702', {'concept': 'Q863908'}] ['Q21991025', 'P702', {'concept': 'Q863908'}] ['Q27549553', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?r WHERE { ?s property:P702 ?r . ?r rdf:type ontology:Q863908 . VALUES ( ?s ) { ( resource:Q21111583 ) ( resource:Q21991780 ) ( resource:Q27549003 ) } }
Choline transporter-like protein 1 Solute carrier family 25 member 36 Mmt2p YPL224C ADP/ATP translocase 1 Sideroflexin-1 Oac1p YKL120W Antigen peptide transporter 1 ATP-binding cassette sub-family B member 10, mitochondrial Solute carrier family 25 member 47 Zn(2+) transporter ZRC1 YMR243C
action filter_type
action find
entity prev_answer
relation encoded by
type nucleic acid sequence
['Choline transporter-like protein 1', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Solute carrier family 25 member 36', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Mmt2p YPL224C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['ADP/ATP translocase 1', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Sideroflexin-1', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Oac1p YKL120W', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Antigen peptide transporter 1', 'encoded by', {'concept': 'nucleic acid sequence'}] ['ATP-binding cassette sub-family B member 10, mitochondrial', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Solute carrier family 25 member 47', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Zn(2+) transporter ZRC1 YMR243C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?r WHERE { ?s property:encoded_by ?r . ?r rdf:type ontology:nucleic_acid_sequence . VALUES ( ?s ) { ( resource:Calcium-binding_mitochondrial_carrier_protein_SCaMC-3 ) ( resource:Antigen_peptide_transporter_1 ) ( resource:hypothetical_protein_YMR221C ) } }
[]
nucleic acid sequence
Q18037186 Q18041631 Q18247722
SYSTEM
SLC44A1, SLC25A36, Slc25a4
Q18037186 Q18041631 Q27545956 Q18247722 Q18250490 Q27541716 Q18031838 Q18037190 Q18272126 Q27542456
(Q21113086,P702,c(Q863908)) (Q21121338,P702,c(Q863908)) (Q27553033,P702,c(Q863908)) (Q21498867,P702,c(Q863908)) (Q21986773,P702,c(Q863908)) (Q27548733,P702,c(Q863908)) (Q21106702,P702,c(Q863908)) (Q21115264,P702,c(Q863908)) (Q21991025,P702,c(Q863908)) (Q27549553,P702,c(Q863908))
action filter_type
action find
entity prev_answer
relation P702
type Q863908
[ANSWERS] encode those nutrients
['Q21113086', 'P702', {'concept': 'Q863908'}] ['Q21121338', 'P702', {'concept': 'Q863908'}] ['Q27553033', 'P702', {'concept': 'Q863908'}] ['Q21498867', 'P702', {'concept': 'Q863908'}] ['Q21986773', 'P702', {'concept': 'Q863908'}] ['Q27548733', 'P702', {'concept': 'Q863908'}] ['Q21106702', 'P702', {'concept': 'Q863908'}] ['Q21115264', 'P702', {'concept': 'Q863908'}] ['Q21991025', 'P702', {'concept': 'Q863908'}] ['Q27549553', 'P702', {'concept': 'Q863908'}]
SELECT DISTINCT ?r WHERE { ?s property:P702 ?r . ?r rdf:type ontology:Q863908 . VALUES ( ?s ) { ( resource:Q21111583 ) ( resource:Q21991780 ) ( resource:Q27549003 ) } }
SLC44A1 SLC25A36 Mmt2p YPL224C Slc25a4 Sfxn1 Oac1p YKL120W TAP1 ABCB10 Slc25a47 Zn(2+) transporter ZRC1 YMR243C
SLC44A1, SLC25A36 and Slc25a4 encode those nutrients
SLC44A1 SLC25A36 Slc25a4
action filter_type
action find
entity prev_answer
relation encoded by
type nucleic acid sequence
['Choline transporter-like protein 1', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Solute carrier family 25 member 36', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Mmt2p YPL224C', 'encoded by', {'concept': 'nucleic acid sequence'}] ['ADP/ATP translocase 1', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Sideroflexin-1', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Oac1p YKL120W', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Antigen peptide transporter 1', 'encoded by', {'concept': 'nucleic acid sequence'}] ['ATP-binding cassette sub-family B member 10, mitochondrial', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Solute carrier family 25 member 47', 'encoded by', {'concept': 'nucleic acid sequence'}] ['Zn(2+) transporter ZRC1 YMR243C', 'encoded by', {'concept': 'nucleic acid sequence'}]
SELECT DISTINCT ?r WHERE { ?s property:encoded_by ?r . ?r rdf:type ontology:nucleic_acid_sequence . VALUES ( ?s ) { ( resource:Calcium-binding_mitochondrial_carrier_protein_SCaMC-3 ) ( resource:Antigen_peptide_transporter_1 ) ( resource:hypothetical_protein_YMR221C ) } }
[]
Clarification
Simple Question|Single Entity|Indirect
Q18037186
P688
Q181394
USER
Which nutrient is encoded by that nucleic acid sequence ?
(Q18037186,P688,c(Q181394))
action filter_type
action find
entity Q18037186
relation P688
type Q181394
['Q18037186', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?k WHERE { resource:Q18037186 property:P688 ?k . ?k rdf:type ontology:Q181394 }
SLC44A1
action filter_type
action find
entity SLC44A1
relation encodes
type nutrient
['SLC44A1', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?k WHERE { resource:SLC44A1 property:encodes ?k . ?k rdf:type ontology:nutrient }
[]
nutrient
Clarification for simple ques.
Q18037186
SYSTEM
Did you mean SLC44A1 ?
Q18037186 Q18041631 Q18247722
(Q18037186,P688,c(Q181394)) (Q18041631,P688,c(Q181394)) (Q18247722,P688,c(Q181394))
[ANSWER]
['Q18037186', 'P688', {'concept': 'Q181394'}] ['Q18041631', 'P688', {'concept': 'Q181394'}] ['Q18247722', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?k WHERE { resource:Q18037186 property:P688 ?k . ?k rdf:type ontology:Q181394 }
SLC44A1 SLC25A36 Slc25a4
Did you mean SLC44A1 ?
SLC44A1
['SLC44A1', 'encodes', {'concept': 'nutrient'}] ['SLC25A36', 'encodes', {'concept': 'nutrient'}] ['Slc25a4', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?k WHERE { resource:SLC44A1 property:encodes ?k . ?k rdf:type ontology:nutrient }
[]
Simple Question (Coreferenced)
USER
Yes
(Q18037186,P688,c(Q181394))
['Q18037186', 'P688', {'concept': 'Q181394'}]
['SLC44A1', 'encodes', {'concept': 'nutrient'}]
[]
Q21113086
SYSTEM
Choline transporter-like protein 1
Q21113086
(Q18037186,P688,c(Q181394))
action filter_type
action find
entity Q18037186
relation P688
type Q181394
The [ANSWER] is encoded by that nucleic acid sequence
['Q18037186', 'P688', {'concept': 'Q181394'}]
SELECT DISTINCT ?k WHERE { resource:Q18037186 property:P688 ?k . ?k rdf:type ontology:Q181394 }
Choline transporter-like protein 1
The Choline transporter-like protein 1 is encoded by that nucleic acid sequence
Choline transporter-like protein 1
action filter_type
action find
entity SLC44A1
relation encodes
type nutrient
['SLC44A1', 'encodes', {'concept': 'nutrient'}]
SELECT DISTINCT ?k WHERE { resource:SLC44A1 property:encodes ?k . ?k rdf:type ontology:nutrient }
[]