system 100 is preferably configured to analyze the biochip 170 the samples 110 are contained within the biochip 170 and are labeled with a multiple fluorescent tags the biochip detection system 100 initiates operation by activating the light source 150 the light waves emitted from the light source 150 are represented with a light wave 180 in fig1 next the light wave 180 preferably passes through the light source filter 160 as the light wave 180 passes through the filter some wavelengths of the light wave 180 are blocked a resultant light wave after passage through the light source filter 160 is represented as a light wave 190 as shown in fig1 preferably the light wave 190 only substantially includes light waves with a predetermined excitation wavelength which correspondingly excites the samples 110 which are labeled with the particular fluorescent tag as the samples 110 are excited by the predetermined excitation wavelength in the light wave 190 the samples 110 produce light waves which are represented by a light wave 200 as shown in fig1 the light wave 200 preferably includes light waves with a predetermined emission wavelength which are produced by the samples 110 the light wave 200 then passes through the lens 120 some extraneous light waves with the predetermined excitation wavelength also pass through the lens 120 as shown by the light wave 190 next the sensor filter 130 preferably blocks out substantially all light waves with wavelengths other than the predetermined emission wavelength the sensor filter 130 substantially only allows light waves represented by the light wave 200 to reach the ccd sensor 140 by substantially allowing only light waves having the predetermined emission wavelength to reach the ccd.