TransBorrow: genome-guided transcriptome assembly by borrowing assemblies from different assemblers.RNA-seq technology is widely used in various transcriptomic studies and provides great opportunities to reveal the complex structures of transcriptomes.  To effectively analyze RNA-seq data, we introduce a novel transcriptome assembler, TransBorrow, which borrows the assemblies from different assemblers to search for reliable subsequences by building a colored graph from those borrowed assemblies.  TransBorrow was tested on both simulated and real data sets and showed great superiority over all the compared leading assemblers.
TransBorrow
TransBorrow: genome-guided transcriptome assembly by borrowing assemblies from different assemblers.RNA-seq technology is widely used in various transcriptomic studies and provides great opportunities to reveal the complex structures of transcriptomes.  To effectively analyze RNA-seq data, we introduce a novel transcriptome assembler, TransBorrow, which borrows the assemblies from different assemblers to search for reliable subsequences by building a colored graph from those borrowed assemblies.  TransBorrow was tested on both simulated and real data sets and showed great superiority over all the compared leading assemblers.
TransBorrow