Further modules allow genomic visualization and the calculation of growth rates, as well as integration and subsequent plotting of pipeline results as heatmaps or heat trees. 
THERM
Wochenende - modular and flexible alignment-based shotgun metagenome analysis.BACKGROUND
 Our alignment-based pipeline, Wochenende, incorporates flexible quality control, trimming, mapping, various filters and normalization.  Wochenende has the ability to find and filter alignments to all kingdoms of life using both short and long reads, and requires only good quality reference genomes.  Wochenende automatically combines multiple available modules ranging from quality control and normalization to taxonomic visualization.  Wochenende is available at https://github.com/MHH-RCUG/nf_wochenende .
Wochenende