On the one hand, we aim at providing a full, understandable Python/Jupyter-based code which can be used by both computer scientists and biologists with no advanced computational background. 
Python
On the one hand, we aim at providing a full, understandable Python/Jupyter-based code which can be used by both computer scientists and biologists with no advanced computational background. 
Jupyter
All files (codes and input data) can be found on a GitHub repository. 
GitHub
We have also embedded the files into a Binder package so that the full analysis can be run on any machine through Internet.
Binder