As an alternative to ChIP, DNA adenine methyltransferase identification by sequencing (DamID-seq) was recently shown to be able to characterize binding sites in single mammalian cells.  In this report, we present a user-friendly pipeline to analyse DamID-seq data in C. elegans. 
DamID-seq
Chromatin immunoprecipitation has proven valuable but it requires considerable amounts of starting material. 
Chromatin immunoprecipitation
As an alternative to ChIP, DNA adenine methyltransferase identification by sequencing (DamID-seq) was recently shown to be able to characterize binding sites in single mammalian cells.  In this report, we present a user-friendly pipeline to analyse DamID-seq data in C. elegans. 
DamID-seq