dbHT-Trans: An Efficient Tool for Filtering the Protein-Encoding Transcripts Assembled by RNA-Seq According to Search for Homologous Proteins.In RNA-Seq studies, there are still many challenges for reliably assembling transcripts.  Here, we present an automatic and efficient tool of dbHT-Trans for filtering the protein-encoding transcripts assembled by RNA-Seq.  Application of dbHT-Trans to the annotated transcriptome of mouse revealed that the sensitivity was almost 90% for recalling protein-encoding transcripts.  The source codes, example data, and manual of dbHT-Trans are freely available on the GitHub repository.
dbHT-Trans