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InstaDeepAI
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genomics-long-range-benchmark

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etrop commited on Mar 19, 2024

Commit

e02e759

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verified ·

1 Parent(s): a2e188f

Update genomics-long-range-benchmark.py

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genomics-long-range-benchmark.py +1 -1

genomics-long-range-benchmark.py CHANGED Viewed

@@ -478,7 +478,7 @@ class VariantEffectPredictionHandler(GenomicLRATaskHandler):
         self.reference_genome = Fasta(reference_genome_file, one_based_attributes=False)
         self.coordinates_labels_csv_file = dl_manager.download_and_extract(
-            f"variant_effect_prediction/All_Tissues.csv"
         )
         return super().split_generators(dl_manager, cache_dir_root)

         self.reference_genome = Fasta(reference_genome_file, one_based_attributes=False)
         self.coordinates_labels_csv_file = dl_manager.download_and_extract(
+            f"variant_effect_gene_expression/All_Tissues.csv"
         )
         return super().split_generators(dl_manager, cache_dir_root)