Upload 3 files
Browse files- .gitattributes +1 -0
- gene_coordinates.csv +0 -0
- label_mapping.csv +219 -0
- rna_expression_values.csv +3 -0
.gitattributes
CHANGED
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@@ -53,3 +53,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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*.jpg filter=lfs diff=lfs merge=lfs -text
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*.jpeg filter=lfs diff=lfs merge=lfs -text
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*.webp filter=lfs diff=lfs merge=lfs -text
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*.jpg filter=lfs diff=lfs merge=lfs -text
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*.jpeg filter=lfs diff=lfs merge=lfs -text
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*.webp filter=lfs diff=lfs merge=lfs -text
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+
rna_expression_values.csv filter=lfs diff=lfs merge=lfs -text
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gene_coordinates.csv
ADDED
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The diff for this file is too large to render.
See raw diff
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label_mapping.csv
ADDED
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@@ -0,0 +1,219 @@
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| 1 |
+
,Labels
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| 2 |
+
0,Adipose_Subcutaneous
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| 3 |
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1,Adipose_Visceral_Omentum
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| 4 |
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2,Adrenal_Gland
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| 5 |
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3,Artery_Aorta
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| 6 |
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4,Artery_Coronary
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| 7 |
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5,Artery_Tibial
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| 8 |
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6,Bladder
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| 9 |
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7,Brain_Amygdala
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| 10 |
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8,Brain_Anterior_cingulate_cortex_BA24
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| 11 |
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9,Brain_Caudate_basal_ganglia
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| 12 |
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10,Brain_Cerebellar_Hemisphere
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11,Brain_Cerebellum
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| 14 |
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12,Brain_Cortex
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| 15 |
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13,Brain_Frontal_Cortex_BA9
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| 16 |
+
14,Brain_Hippocampus
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| 17 |
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15,Brain_Hypothalamus
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| 18 |
+
16,Brain_Nucleus_accumbens_basal_ganglia
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| 19 |
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17,Brain_Putamen_basal_ganglia
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| 20 |
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18,Brain_Spinal_cord_cervical_c1
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| 21 |
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19,Brain_Substantia_nigra
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| 22 |
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20,Breast_Mammary_Tissue
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| 23 |
+
21,Cells_EBV-transformed_lymphocytes
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| 24 |
+
22,Cells_Transformed_fibroblasts
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23,Cervix_Ectocervix
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24,Cervix_Endocervix
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| 27 |
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25,Colon_Sigmoid
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26,Colon_Transverse
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| 29 |
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27,Esophagus_Gastroesophageal_Junction
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| 30 |
+
28,Esophagus_Mucosa
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| 31 |
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29,Esophagus_Muscularis
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30,Fallopian_Tube
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31,Heart_Atrial_Appendage
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32,Heart_Left_Ventricle
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33,Kidney_Cortex
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34,Liver
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35,Lung
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36,Minor_Salivary_Gland
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| 39 |
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37,Muscle_Skeletal
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38,Nerve_Tibial
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| 41 |
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39,Ovary
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| 42 |
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40,Pancreas
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| 43 |
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41,Pituitary
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| 44 |
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42,Prostate
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| 45 |
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43,Skin_Not_Sun_Exposed_Suprapubic
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44,Skin_Sun_Exposed_Lower_leg
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| 47 |
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45,Small_Intestine_Terminal_Ileum
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| 48 |
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46,Spleen
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47,Stomach
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48,Testis
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49,Thyroid
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50,Uterus
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51,Vagina
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52,Whole_Blood
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| 55 |
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53,cardiac ventricle fibroblast
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| 56 |
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54,hair follicular keratinocyte
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| 57 |
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55,airway epithelial cell
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| 58 |
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56,epithelial cell of proximal tubule
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57,pericardium fibroblast
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| 60 |
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58,mesangial cell
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59,bronchial fibroblast
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| 62 |
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60,glomerular endothelial cell
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| 63 |
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61,kidney epithelial cell
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| 64 |
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62,mammary microvascular endothelial cell
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| 65 |
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63,epithelial cell of alveolus of lung
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| 66 |
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64,myometrial cell
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| 67 |
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65,cardiac atrium fibroblast
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| 68 |
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66,endometrial microvascular endothelial cell
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| 69 |
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67,smooth muscle cell
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| 70 |
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68,hepatocyte
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| 71 |
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69,neural progenitor cell
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| 72 |
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70,HT1080
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| 73 |
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71,SK-N-DZ
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| 74 |
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72,SK-MEL-5
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73,NCI-H460
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74,astrocyte
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75,LHCN-M2
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76,K562
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77,HepG2
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78,MCF-7
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79,bipolar spindle neuron
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| 82 |
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80,skeletal muscle myoblast
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| 83 |
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81,myotube
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82,H7-hESC
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83,RPMI-7951
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84,M059J
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85,H4
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86,MG63
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87,G401
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88,Caki2
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89,SJSA1
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| 92 |
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90,Daoy
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91,A172
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+
92,induced pluripotent stem cell
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93,fibroblast of arm
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94,A375
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| 97 |
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95,HT-29
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96,PC-3
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97,Karpas-422
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98,Oci-Ly-7
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99,SJCRH30
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100,neural cell
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101,umbilical cord
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102,pericyte cell
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103,melanocyte of skin
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104,placental epithelial cell
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105,hair follicle dermal papilla cell
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106,hematopoietic multipotent progenitor cell
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107,vein endothelial cell
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108,osteoblast
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| 111 |
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109,articular chondrocyte of knee joint
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110,thoracic aorta endothelial cell
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| 113 |
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111,fibroblast of the aortic adventitia
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| 114 |
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112,skeletal muscle satellite cell
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| 115 |
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113,fibroblast of dermis
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114,mammary epithelial cell
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| 117 |
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115,subcutaneous preadipocyte
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| 118 |
+
116,fibroblast of villous mesenchyme
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| 119 |
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117,endothelial cell of umbilical vein
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| 120 |
+
118,fibroblast of lung
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| 121 |
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119,keratinocyte
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| 122 |
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120,stomach
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| 123 |
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121,dermis microvascular lymphatic vessel endothelial cell
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| 124 |
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122,tongue
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| 125 |
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123,lung microvascular endothelial cell
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| 126 |
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124,liver
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| 127 |
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125,smooth muscle cell of the coronary artery
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| 128 |
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126,aortic smooth muscle cell
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| 129 |
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127,cerebellum
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| 130 |
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128,occipital lobe
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| 131 |
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129,lung
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| 132 |
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130,metanephros
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| 133 |
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131,bronchial smooth muscle cell
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| 134 |
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132,spinal cord
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| 135 |
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133,parietal lobe
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| 136 |
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134,diencephalon
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| 137 |
+
135,bronchial epithelial cell
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| 138 |
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136,human nasal epithelial cells
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| 139 |
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137,pulmonary artery endothelial cell
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| 140 |
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138,regular cardiac myocyte
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| 141 |
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139,endothelial cell of coronary artery
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| 142 |
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140,skeletal muscle tissue
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| 143 |
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141,skin of body
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| 144 |
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142,frontal cortex
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| 145 |
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143,camera-type eye
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| 146 |
+
144,dermis lymphatic vessel endothelial cell
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| 147 |
+
145,smooth muscle cell of the umbilical artery
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| 148 |
+
146,tracheal epithelial cell
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| 149 |
+
147,smooth muscle cell of trachea
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| 150 |
+
148,renal cortical epithelial cell
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| 151 |
+
149,dermis blood vessel endothelial cell
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| 152 |
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150,heart
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| 153 |
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151,thyroid gland
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| 154 |
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152,urinary bladder
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| 155 |
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153,temporal lobe
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| 156 |
+
154,uterine smooth muscle cell
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| 157 |
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155,epithelial cell of umbilical artery
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| 158 |
+
156,smooth muscle cell of the pulmonary artery
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| 159 |
+
157,smooth muscle cell of bladder
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| 160 |
+
158,bladder microvascular endothelial cell
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| 161 |
+
159,uterus
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| 162 |
+
160,GM12878
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| 163 |
+
161,Universal_Human_Reference
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| 164 |
+
162,H1_Cell_Line
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| 165 |
+
163,H1_BMP4_Derived_Mesendoderm_Cultured_Cells
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| 166 |
+
164,H1_BMP4_Derived_Trophoblast_Cultured_Cells
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| 167 |
+
165,H1_Derived_Mesenchymal_Stem_Cells
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| 168 |
+
166,H1_Derived_Neuronal_Progenitor_Cultured_Cells
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| 169 |
+
167,hESC_Derived_CD184+_Endoderm_Cultured_Cells
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| 170 |
+
168,hESC_Derived_CD56+_Ectoderm_Cultured_Cells
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| 171 |
+
169,hESC_Derived_CD56+_Mesoderm_Cultured_Cells
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| 172 |
+
170,HUES64_Cell_Line
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| 173 |
+
171,4star
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| 174 |
+
172,Breast_Myoepithelial_Cells
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| 175 |
+
173,Breast_vHMEC
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| 176 |
+
174,CD4_Memory_Primary_Cells
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| 177 |
+
175,CD4_Naive_Primary_Cells
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| 178 |
+
176,CD8_Naive_Primary_Cells
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| 179 |
+
177,Mobilized_CD34_Primary_Cells_Female
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| 180 |
+
178,Neurosphere_Cultured_Cells_Cortex_Derived
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| 181 |
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179,Neurosphere_Cultured_Cells_Ganglionic_Eminence_Derived
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| 182 |
+
180,Penis_Foreskin_Fibroblast_Primary_Cells_skin01
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| 183 |
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181,Penis_Foreskin_Fibroblast_Primary_Cells_skin02
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| 184 |
+
182,Penis_Foreskin_Keratinocyte_Primary_Cells_skin02
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| 185 |
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183,Penis_Foreskin_Keratinocyte_Primary_Cells_skin03
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| 186 |
+
184,Penis_Foreskin_Melanocyte_Primary_Cells_skin01
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| 187 |
+
185,Penis_Foreskin_Melanocyte_Primary_Cells_skin03
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| 188 |
+
186,Peripheral_Blood_Mononuclear_Primary_Cells
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| 189 |
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187,Aorta
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| 190 |
+
188,Adult_Liver
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| 191 |
+
189,Brain_Germinal_Matrix
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| 192 |
+
190,Brain_Hippocampus_Middle
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| 193 |
+
191,Esophagus
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| 194 |
+
192,Fetal_Brain_Female
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| 195 |
+
193,Fetal_Intestine_Large
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| 196 |
+
194,Fetal_Intestine_Small
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| 197 |
+
195,Pancreatic_Islets
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| 198 |
+
196,Gastric
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| 199 |
+
197,Left_Ventricle
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| 200 |
+
198,Lung.1
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| 201 |
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199,Ovary.1
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| 202 |
+
200,Pancreas.1
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| 203 |
+
201,Psoas_Muscle
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| 204 |
+
202,Right_Atrium
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| 205 |
+
203,Right_Ventricle
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| 206 |
+
204,Sigmoid_Colon
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| 207 |
+
205,Small_Intestine
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| 208 |
+
206,Thymus
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| 209 |
+
207,Spleen.1
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| 210 |
+
208,A549
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| 211 |
+
209,GM12878.1
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| 212 |
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210,HELA
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| 213 |
+
211,HEPG2
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| 214 |
+
212,HMEC
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| 215 |
+
213,HSMM
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| 216 |
+
214,HUVEC
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| 217 |
+
215,K562.1
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| 218 |
+
216,NHEK
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| 219 |
+
217,NHLF
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rna_expression_values.csv
ADDED
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@@ -0,0 +1,3 @@
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| 1 |
+
version https://git-lfs.github.com/spec/v1
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oid sha256:4bee3ccec9002d20cec0dc952bc55c93d423e10065b7a83e94a74b739c16a2e8
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size 101621337
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