Answers.Body: <p>If the authors did not provide the raw counts, and I don't think it is compulsory, unfortunately you will need to download the raw data, align and count.</p>
  
Answers.ContentLicense: CC BY-SA 4.0
Answers.CreationDate: 2022-06-06T09:19:24.290Z
Answers.LastActivityDate: 2022-06-06T09:19:24.290Z
Answers.UserDisplayName: haci
Body: <p>I am using dataset <a href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE85241" rel="nofollow noreferrer">GSE85241</a>, but I can't find the read counts of the dataset. It only provides with <code>RPKM</code> values.</p>
  <p>How can I find the read counts of a dataset?</p>
  
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2023-09-15T20:13:17.697Z
Comments.Text: Hi @KevisLin I think the answer below is the correct answer, haci is an expert. Please consider accepting the answer
Comments.UserDisplayName: M__
Tags: <rna-seq><single-cell><phylogenetics>
Title: How can I get data of single cell RNA sequence with raw count?
ThreadText: # How can I get data of single cell RNA sequence with raw count?
  
  (Asked by: username_0 on 2022-06-06)
  
  I am using dataset [GSE85241](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE85241), but I can't find the read counts of the dataset. It only provides with `RPKM` values.
  
  How can I find the read counts of a dataset?
  
  **Tags:** rna-seq, single-cell, phylogenetics
  
  > **Comments:**
  > **username_1**: Hi @username_0 I think the answer below is the correct answer, username_2 is an expert. Please consider accepting the answer  
  
  ---
  
  ## 1 answers
  
  ### Answer by username_2 on 2022-06-06. Score: 1
  
  If the authors did not provide the raw counts, and I don't think it is compulsory, unfortunately you will need to download the raw data, align and count.
  
  
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