Body: <p>I want to use the single-cell data from the following expression profiling which concerns the RNA-seq of metastatic melanoma:
  <a href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE72056" rel="nofollow noreferrer">https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE72056</a></p>
  <p>The data was also analyzed here,
  <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4944528/" rel="nofollow noreferrer">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4944528/</a></p>
  <p>However I cannot find the mapping between patient and single-cell samples anywhere, neither in the paper nor in the supplementary materials. Anybody has an experience with this data?</p>
  <p>Note that in the Supp1 (<a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4944528/bin/NIHMS791837-supplement-Supp1.doc" rel="nofollow noreferrer">https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4944528/bin/NIHMS791837-supplement-Supp1.doc</a>) from the paper, at Table S1 (almost at the end of the file) that represents the mapping between tumor and patient, which is a one-to-one mapping. But no mapping between samples and tumors found.</p>
  
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2019-08-27T13:29:28.257Z
Comments.Text: No answer yet?!
Comments.UserDisplayName: hadi
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2019-08-27T19:51:17.097Z
Comments.Text: If there is no answer, it is likely because no one has found an answer. Clearly you have had some trouble with this, perhaps it is a difficult question to answer.
Comments.UserDisplayName: d_kennetz
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2019-08-29T12:53:00.687Z
Comments.Text: Hey i briefly checked the publication. It is really hard to make a connection between the sequenced sample names and actual sample name. What I usually do is to write to the authors directly..
Comments.UserDisplayName: StupidWolf
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2019-08-30T13:03:24.337Z
Comments.Text: OK Thanks. I will go for it.
Comments.UserDisplayName: hadi
Tags: <rna-seq><read-mapping><cancer>
Title: Patient-sample mapping in GSE72056 dataset
ThreadText: # Patient-sample mapping in GSE72056 dataset
  
  (Asked by: username_0 on 2019-08-23)
  
  I want to use the single-cell data from the following expression profiling which concerns the RNA-seq of metastatic melanoma:
  <https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE72056>
  
  The data was also analyzed here,
  <https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4944528/>
  
  However I cannot find the mapping between patient and single-cell samples anywhere, neither in the paper nor in the supplementary materials. Anybody has an experience with this data?
  
  Note that in the Supp1 (<https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4944528/bin/NIHMS791837-supplement-Supp1.doc>) from the paper, at Table S1 (almost at the end of the file) that represents the mapping between tumor and patient, which is a one-to-one mapping. But no mapping between samples and tumors found.
  
  **Tags:** rna-seq, read-mapping, cancer
  
  > **Comments:**
  > **username_0**: No answer yet?!  
  > **username_1**: If there is no answer, it is likely because no one has found an answer. Clearly you have had some trouble with this, perhaps it is a difficult question to answer.  
  > **username_2**: Hey i briefly checked the publication. It is really hard to make a connection between the sequenced sample names and actual sample name. What I usually do is to write to the authors directly..  
  > **username_0**: OK Thanks. I will go for it.  
  
  ---
  
  ## 0 answers
  
  