Body: <p>I am working on B cell lymphoma of dogs to identify the specific type of mutations related to this disease. I am performing NGS whole genome sequencing analysis. I have performed the variant annotation using ANNOVAR and received thousands of variants. I want to separate the cancer related variants among these, is there any online platforms that I can compare my variants with? OR how to proceed with this data? Could someone please help? Thanks.</p>
  
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2024-04-21T01:47:44.490Z
Comments.Text: Please edit the question to limit it to a specific problem with enough detail to identify an adequate answer.
Comments.UserDisplayName: Community
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2024-04-22T21:42:34.810Z
Comments.Text: What type of variants are you looking for? (Rare vs common, SNVs vs amplifications/deletions vs fusions, etc.) And  what are you using as a control?
Comments.UserDisplayName: Sarah
Tags: <ngs>
Title: How to extract the mutations specific to cancer after variant annotation in NGS analysis
ThreadText: # How to extract the mutations specific to cancer after variant annotation in NGS analysis
  
  (Asked by: username_0 on 2024-04-21)
  
  I am working on B cell lymphoma of dogs to identify the specific type of mutations related to this disease. I am performing NGS whole genome sequencing analysis. I have performed the variant annotation using ANNOVAR and received thousands of variants. I want to separate the cancer related variants among these, is there any online platforms that I can compare my variants with? OR how to proceed with this data? Could someone please help? Thanks.
  
  **Tags:** ngs
  
  > **Comments:**
  > **username_1**: Please edit the question to limit it to a specific problem with enough detail to identify an adequate answer.  
  > **username_2**: What type of variants are you looking for? (Rare vs common, SNVs vs amplifications/deletions vs fusions, etc.) And  what are you using as a control?  
  
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  ## 0 answers
  
  