Answers.Body: <p>How about:</p>
  <ul>
  <li><p>dbGaP - <a href="https://www.ncbi.nlm.nih.gov/gap/" rel="nofollow noreferrer">https://www.ncbi.nlm.nih.gov/gap/</a> - in case you are searching for supporting datasets I leave its entry in <a href="http://biokeanos.com/source/Database%20of%20Genotypes%20and%20Phenotypes" rel="nofollow noreferrer">BiŌkeanós</a></p>
  </li>
  <li><p><a href="https://www.ddbj.nig.ac.jp/jga/" rel="nofollow noreferrer">https://www.ddbj.nig.ac.jp/jga/</a> - the access might be a bit more complicated.</p>
  </li>
  <li><p><a href="https://www.internationalgenome.org" rel="nofollow noreferrer">https://www.internationalgenome.org</a>, not particularly large, in their FAQ they state that the individuals sequenced have not self-reported any diseases - perhaps you might want to add those with to your negative set.  Again, its entry in <a href="https://biokeanos.com/source/The%20International%20Genome%20Sample%20Resource" rel="nofollow noreferrer">BiŌkeanós</a>.</p>
  </li>
  </ul>
  <p>If you are looking for more comprehensive information, you could try biobanks - e.g. <a href="https://www.ukbiobank.ac.uk" rel="nofollow noreferrer">https://www.ukbiobank.ac.uk</a>. These are usually open (or reasonably priced) for research but the approval process can take time.</p>
  <p>A side note - some of GWAS catalogues will have a link to the study where the association originated from, <a href="https://www.ebi.ac.uk/gwas/studies/GCST005312" rel="nofollow noreferrer">e.g. here</a>. You can sometimes find the datasource there.</p>
  
Answers.ContentLicense: CC BY-SA 4.0
Answers.CreationDate: 2021-02-17T19:21:06.097Z
Answers.LastActivityDate: 2021-02-17T19:58:09.810Z
Answers.LastEditDate: 2021-02-17T19:58:09.810Z
Answers.UserDisplayName: ellimilial
Body: <br>
  I'm a master's student working on genomic prediction of complex traits using deep learning.
  i'm looking for a dataset of human genotypes and phenotypes that has been used for a GWAS. 
  The only thing i can get from the gwas i found is the summary statistics not the raw data. <br>
  Does anyone know if it's possible to get such data (for free ) for a research project? 
  <br>
  Thanks.
  
Tags: <genomics><gwas><deep-learning>
Title: how to get access to genotypes and phenotypes used for a GWAS
ThreadText: # how to get access to genotypes and phenotypes used for a GWAS
  
  (Asked by: username_0 on 2021-02-17)
  
  I'm a master's student working on genomic prediction of complex traits using deep learning.
  i'm looking for a dataset of human genotypes and phenotypes that has been used for a GWAS.
  The only thing i can get from the gwas i found is the summary statistics not the raw data.   
  Does anyone know if it's possible to get such data (for free ) for a research project?
    
  Thanks.
  
  **Tags:** genomics, gwas, deep-learning
  
  
  ---
  
  ## 1 answers
  
  ### Answer by username_1 on 2021-02-17. Score: 0 | Accepted answer
  
  How about:
  
  * dbGaP - <https://www.ncbi.nlm.nih.gov/gap/> - in case you are searching for supporting datasets I leave its entry in [BiŌkeanós](http://biokeanos.com/source/Database%20of%20Genotypes%20and%20Phenotypes)
  * <https://www.ddbj.nig.ac.jp/jga/> - the access might be a bit more complicated.
  * <https://www.internationalgenome.org>, not particularly large, in their FAQ they state that the individuals sequenced have not self-reported any diseases - perhaps you might want to add those with to your negative set. Again, its entry in [BiŌkeanós](https://biokeanos.com/source/The%20International%20Genome%20Sample%20Resource).
  
  If you are looking for more comprehensive information, you could try biobanks - e.g. <https://www.ukbiobank.ac.uk>. These are usually open (or reasonably priced) for research but the approval process can take time.
  
  A side note - some of GWAS catalogues will have a link to the study where the association originated from, [e.g. here](https://www.ebi.ac.uk/gwas/studies/GCST005312). You can sometimes find the datasource there.
  
  
  ---
  
  