Answers.Body: <p>How about:</p>
  <ul>
  <li><a href="http://www.informatics.jax.org/expression.shtml" rel="nofollow noreferrer">http://www.informatics.jax.org/expression.shtml</a></li>
  <li><a href="http://www.emouseatlas.org/emage/home.php" rel="nofollow noreferrer">http://www.emouseatlas.org/emage/home.php</a></li>
  </ul>
  <p>Other potential databases of interest:</p>
  <ul>
  <li><a href="https://biokeanos.com/search?q=co-expression+%2Bmouse" rel="nofollow noreferrer">https://biokeanos.com/search?q=co-expression+%2Bmouse</a></li>
  </ul>
  
Answers.ContentLicense: CC BY-SA 4.0
Answers.CreationDate: 2021-02-23T12:18:29.007Z
Answers.Text: Thanks for your great answer!  The first two seems to be developmental expressions, while the third database is very helpful!  This site looks quite good: https://gemma.msl.ubc.ca/
Answers.UserDisplayName: jasperhyp
Answers.ContentLicense: CC BY-SA 4.0
Answers.CreationDate: 2021-02-23T09:50:06.163Z
Answers.LastActivityDate: 2021-02-23T09:50:06.163Z
Answers.UserDisplayName: ellimilial
Body: <p>I am currently working on gene clustering based on co-expression pattern in mouse brain. The problem is I do not have some solid way to test my result. Are there any suggestions for databases indicating groups of genes that co-express (in mouse brain), or even better indicating some similarity metrics between each pair of genes based on expression pattern?</p>
  <p>Also, I do want some databases for differentially-expressed genes ;)</p>
  <p>PS: By &quot;differentially-expressed&quot; I am referring to a pair of genes whose expression patterns in a single individual differ.</p>
  
Tags: <database><public-databases><differential-expression><gene-expression><coexpression>
Title: Are there any databases for gene co-expression or expression pattern clustering?
ThreadText: # Are there any databases for gene co-expression or expression pattern clustering?
  
  (Asked by: username_0 on 2021-02-23)
  
  I am currently working on gene clustering based on co-expression pattern in mouse brain. The problem is I do not have some solid way to test my result. Are there any suggestions for databases indicating groups of genes that co-express (in mouse brain), or even better indicating some similarity metrics between each pair of genes based on expression pattern?
  
  Also, I do want some databases for differentially-expressed genes ;)
  
  PS: By "differentially-expressed" I am referring to a pair of genes whose expression patterns in a single individual differ.
  
  **Tags:** database, public-databases, differential-expression, gene-expression, coexpression
  
  
  ---
  
  ## 1 answers
  
  ### Answer by username_1 on 2021-02-23. Score: 1 | Accepted answer
  
  How about:
  
  * <http://www.informatics.jax.org/expression.shtml>
  * <http://www.emouseatlas.org/emage/home.php>
  
  Other potential databases of interest:
  
  * <https://biokeanos.com/search?q=co-expression+%2Bmouse>
  
  > **Comments:**
  > **username_0**: Thanks for your great answer!  The first two seems to be developmental expressions, while the third database is very helpful!  This site looks quite good: https://gemma.msl.ubc.ca/  
  
  ---
  
  