Answers.Body: <p>If you can create a shiny application in RStudio, you can deploy the application as a web page. The simplest way is to publish on <a href="https://www.shinyapps.io/" rel="nofollow noreferrer">shinyapps.io</a>, because there's a button right there in RStudio to do that:</p>
  <p><a href="https://i.sstatic.net/md3F7JXD.png" rel="nofollow noreferrer"><img src="https://i.sstatic.net/md3F7JXD.png" alt="RStudio screen with the Publish button indicated" /></a></p>
  <p>The free user accounts on shinyapps.io are quite limited in terms of computation, but may be enough if you're just showing summary data.</p>
  <p>It is possible to create a world-accessible shiny server on your own system via Shiny Server, but if you don't have experience setting up web servers it's likely to be more tricky:</p>
  <p><a href="https://posit.co/download/shiny-server/" rel="nofollow noreferrer">https://posit.co/download/shiny-server/</a></p>
  <p>For large data access with scripted computation, you could also try CodeOcean:</p>
  <p><a href="https://codeocean.com/" rel="nofollow noreferrer">https://codeocean.com/</a></p>
  
Answers.ContentLicense: CC BY-SA 4.0
Answers.CreationDate: 2024-12-09T21:45:57.277Z
Answers.Text: Thanks, for my current use, a free shiny account is enough. Good to know other solutions to more complex tasks!
Answers.UserDisplayName: antbirdINFINITY
Answers.ContentLicense: CC BY-SA 4.0
Answers.CreationDate: 2024-12-13T13:46:05.247Z
Answers.Text: Could you kindly mark this as "answered" @antbirdINFINITY its a really good answer.
Answers.UserDisplayName: M__
Answers.ContentLicense: CC BY-SA 4.0
Answers.CreationDate: 2024-12-09T04:14:29.633Z
Answers.LastActivityDate: 2024-12-09T04:14:29.633Z
Answers.UserDisplayName: gringer
Body: <p>I have a bunch of RNA sequencing data, and I want to make it available on a website upon publication. The basic idea is that when you search by a gene ID, the website will show its expression pattern across different conditions, according to a pre-programmed script. I know how to do it in Rstudio, but I don't have experience in creating websites. I wonder if you have any suggestions on how to do that!</p>
  
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2024-12-08T23:48:12.530Z
Comments.Text: easy, dashboards
Comments.UserDisplayName: M__
Comments.ContentLicense: CC BY-SA 4.0
Comments.CreationDate: 2024-12-09T02:37:15.703Z
Comments.Text: Thanks, checking Shiny now
Comments.UserDisplayName: antbirdINFINITY
Tags: <rna-seq><webservice>
Title: How to share gene expression in a interactive website?
ThreadText: # How to share gene expression in a interactive website?
  
  (Asked by: username_0 on 2024-12-08)
  
  I have a bunch of RNA sequencing data, and I want to make it available on a website upon publication. The basic idea is that when you search by a gene ID, the website will show its expression pattern across different conditions, according to a pre-programmed script. I know how to do it in Rstudio, but I don't have experience in creating websites. I wonder if you have any suggestions on how to do that!
  
  **Tags:** rna-seq, webservice
  
  > **Comments:**
  > **username_1**: easy, dashboards  
  > **username_0**: Thanks, checking Shiny now  
  
  ---
  
  ## 1 answers
  
  ### Answer by username_2 on 2024-12-09. Score: 2
  
  If you can create a shiny application in RStudio, you can deploy the application as a web page. The simplest way is to publish on [shinyapps.io](https://www.shinyapps.io/), because there's a button right there in RStudio to do that:
  
  [![RStudio screen with the Publish button indicated](https://i.sstatic.net/md3F7JXD.png)](https://i.sstatic.net/md3F7JXD.png)
  
  The free user accounts on shinyapps.io are quite limited in terms of computation, but may be enough if you're just showing summary data.
  
  It is possible to create a world-accessible shiny server on your own system via Shiny Server, but if you don't have experience setting up web servers it's likely to be more tricky:
  
  <https://posit.co/download/shiny-server/>
  
  For large data access with scripted computation, you could also try CodeOcean:
  
  <https://codeocean.com/>
  
  > **Comments:**
  > **username_0**: Thanks, for my current use, a free shiny account is enough. Good to know other solutions to more complex tasks!  
  > **username_1**: Could you kindly mark this as "answered" @username_0 its a really good answer.  
  
  ---
  
  