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adapter_config.json

@@ -24,12 +24,12 @@
   "rank_pattern": {},
   "revision": null,
   "target_modules": [
-    "o_proj",
+    "k_proj",
     "q_proj",
-    "down_proj",
     "up_proj",
-    "k_proj",
     "gate_proj",
+    "o_proj",
+    "down_proj",
     "v_proj"
   ],
   "task_type": "CAUSAL_LM",

adapter_model.safetensors

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:52bba0d93710c69bb93a42617413e8fba0c3b882222951aa8c202dff6873a03c
-size 1624775328
+oid sha256:6468d9a796dd327c3ea0c068d15fa6bfd93fe9102234db0fed88031fb7f19147
+size 1624713888

special_tokens_map.json

@@ -1,49 +1,14 @@
 {
   "additional_special_tokens": [
     {
-      "content": "<degd>",
+      "content": "<phenotype>",
       "lstrip": false,
       "normalized": false,
       "rstrip": false,
       "single_word": false
     },
     {
-      "content": "<ddd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false
-    },
-    {
-      "content": "<decgd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false
-    },
-    {
-      "content": "<demgd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false
-    },
-    {
-      "content": "<debgd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false
-    },
-    {
-      "content": "<dppd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false
-    },
-    {
-      "content": "<dpd>",
+      "content": "<gene>",
       "lstrip": false,
       "normalized": false,
       "rstrip": false,

tokenizer.json

@@ -1,3 +1,3 @@
 version https://git-lfs.github.com/spec/v1
-oid sha256:75f308eab34ebd3e599c8783678020931835ac7bd549b24c6572fe1c0df52b36
-size 17211202
+oid sha256:c85631fc56a105bb9d8f7b22406f1747a547aedf9b8851a5518ea516faada5ba
+size 17210291

tokenizer_config.json

@@ -2049,7 +2049,7 @@
       "special": true
     },
     "128256": {
-      "content": "<degd>",
+      "content": "<phenotype>",
       "lstrip": false,
       "normalized": false,
       "rstrip": false,
@@ -2057,47 +2057,7 @@
       "special": true
     },
     "128257": {
-      "content": "<ddd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false,
-      "special": true
-    },
-    "128258": {
-      "content": "<decgd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false,
-      "special": true
-    },
-    "128259": {
-      "content": "<demgd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false,
-      "special": true
-    },
-    "128260": {
-      "content": "<debgd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false,
-      "special": true
-    },
-    "128261": {
-      "content": "<dppd>",
-      "lstrip": false,
-      "normalized": false,
-      "rstrip": false,
-      "single_word": false,
-      "special": true
-    },
-    "128262": {
-      "content": "<dpd>",
+      "content": "<gene>",
       "lstrip": false,
       "normalized": false,
       "rstrip": false,
@@ -2106,13 +2066,8 @@
     }
   },
   "additional_special_tokens": [
-    "<degd>",
-    "<ddd>",
-    "<decgd>",
-    "<demgd>",
-    "<debgd>",
-    "<dppd>",
-    "<dpd>"
+    "<phenotype>",
+    "<gene>"
   ],
   "bos_token": "<|begin_of_text|>",
   "chat_template": "{{- bos_token }}\n{%- if custom_tools is defined %}\n    {%- set tools = custom_tools %}\n{%- endif %}\n{%- if not tools_in_user_message is defined %}\n    {%- set tools_in_user_message = true %}\n{%- endif %}\n{%- if not date_string is defined %}\n    {%- if strftime_now is defined %}\n        {%- set date_string = strftime_now(\"%d %b %Y\") %}\n    {%- else %}\n        {%- set date_string = \"26 Jul 2024\" %}\n    {%- endif %}\n{%- endif %}\n{%- if not tools is defined %}\n    {%- set tools = none %}\n{%- endif %}\n\n{#- This block extracts the system message, so we can slot it into the right place. #}\n{%- if messages[0]['role'] == 'system' %}\n    {%- set system_message = messages[0]['content']|trim %}\n    {%- set messages = messages[1:] %}\n{%- else %}\n    {%- set system_message = \"\" %}\n{%- endif %}\n\n{#- System message #}\n{{- \"<|start_header_id|>system<|end_header_id|>\\n\\n\" }}\n{%- if tools is not none %}\n    {{- \"Environment: ipython\\n\" }}\n{%- endif %}\n{{- \"Cutting Knowledge Date: December 2023\\n\" }}\n{{- \"Today Date: \" + date_string + \"\\n\\n\" }}\n{%- if tools is not none and not tools_in_user_message %}\n    {{- \"You have access to the following functions. To call a function, please respond with JSON for a function call.\" }}\n    {{- 'Respond in the format {\"name\": function name, \"parameters\": dictionary of argument name and its value}.' }}\n    {{- \"Do not use variables.\\n\\n\" }}\n    {%- for t in tools %}\n        {{- t | tojson(indent=4) }}\n        {{- \"\\n\\n\" }}\n    {%- endfor %}\n{%- endif %}\n{{- system_message }}\n{{- \"<|eot_id|>\" }}\n\n{#- Custom tools are passed in a user message with some extra guidance #}\n{%- if tools_in_user_message and not tools is none %}\n    {#- Extract the first user message so we can plug it in here #}\n    {%- if messages | length != 0 %}\n        {%- set first_user_message = messages[0]['content']|trim %}\n        {%- set messages = messages[1:] %}\n    {%- else %}\n        {{- raise_exception(\"Cannot put tools in the first user message when there's no first user message!\") }}\n{%- endif %}\n    {{- '<|start_header_id|>user<|end_header_id|>\\n\\n' -}}\n    {{- \"Given the following functions, please respond with a JSON for a function call \" }}\n    {{- \"with its proper arguments that best answers the given prompt.\\n\\n\" }}\n    {{- 'Respond in the format {\"name\": function name, \"parameters\": dictionary of argument name and its value}.' }}\n    {{- \"Do not use variables.\\n\\n\" }}\n    {%- for t in tools %}\n        {{- t | tojson(indent=4) }}\n        {{- \"\\n\\n\" }}\n    {%- endfor %}\n    {{- first_user_message + \"<|eot_id|>\"}}\n{%- endif %}\n\n{%- for message in messages %}\n    {%- if not (message.role == 'ipython' or message.role == 'tool' or 'tool_calls' in message) %}\n        {{- '<|start_header_id|>' + message['role'] + '<|end_header_id|>\\n\\n'+ message['content'] | trim + '<|eot_id|>' }}\n    {%- elif 'tool_calls' in message %}\n        {%- if not message.tool_calls|length == 1 %}\n            {{- raise_exception(\"This model only supports single tool-calls at once!\") }}\n        {%- endif %}\n        {%- set tool_call = message.tool_calls[0].function %}\n        {{- '<|start_header_id|>assistant<|end_header_id|>\\n\\n' -}}\n        {{- '{\"name\": \"' + tool_call.name + '\", ' }}\n        {{- '\"parameters\": ' }}\n        {{- tool_call.arguments | tojson }}\n        {{- \"}\" }}\n        {{- \"<|eot_id|>\" }}\n    {%- elif message.role == \"tool\" or message.role == \"ipython\" %}\n        {{- \"<|start_header_id|>ipython<|end_header_id|>\\n\\n\" }}\n        {%- if message.content is mapping or message.content is iterable %}\n            {{- message.content | tojson }}\n        {%- else %}\n            {{- message.content }}\n        {%- endif %}\n        {{- \"<|eot_id|>\" }}\n    {%- endif %}\n{%- endfor %}\n{%- if add_generation_prompt %}\n    {{- '<|start_header_id|>assistant<|end_header_id|>\\n\\n' }}\n{%- endif %}\n",