Amal Vinoy
commited on
Upload 8 files
Browse files- README.md +137 -0
- config.json +38 -0
- generation_config.json +7 -0
- gitattributes +36 -0
- model-00002-of-00003.safetensors +3 -0
- preprocessor_config.json +25 -0
- special_tokens_map.json +39 -0
- tokenizer_config.json +0 -0
README.md
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---
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library_name: transformers
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pipeline_tag: image-text-to-text
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license: apache-2.0
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datasets:
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- joshuachou/SkinCAP
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- HemanthKumarK/SKINgpt
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language:
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- en
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tags:
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- biology
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- skin
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- skin disease
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- cancer
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- medical
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---
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# Model Card for PaliGemma Dermatology Model
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## Model Details
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### Model Description
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This model, based on the PaliGemma-3B architecture, has been fine-tuned for dermatology-related image and text processing tasks. The model is designed to assist in the identification of various skin conditions using a combination of image analysis and natural language processing.
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- **Developed by:** Bruce_Wayne
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- **Model type:** vision model
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- **Finetuned from model:** https://huggingface.co/google/paligemma-3b-pt-224
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- **LoRa Adaptors used:** Yes
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- **Intended use:** Medical image analysis, specifically for dermatology
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**
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### please let me know how the model works -->https://forms.gle/cBA6apSevTyiEbp46
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### Thank you
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## Uses
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### Direct Use
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The model can be directly used for analyzing dermatology images, providing insights into potential skin conditions.
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## Bias, Risks, and Limitations
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**Skin Tone Bias:** The model may have been trained on a dataset that does not adequately represent all skin tones, potentially leading to biased results.
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**Geographic Bias:** The model's performance may vary depending on the prevalence of certain conditions in different geographic regions.
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## How to Get Started with the Model
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```python
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import torch
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from transformers import AutoProcessor, PaliGemmaForConditionalGeneration
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from PIL import Image
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# Load the model and processor
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model_id = "brucewayne0459/paligemma_derm"
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processor = AutoProcessor.from_pretrained(model_id)
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model = PaliGemmaForConditionalGeneration.from_pretrained(model_id, device_map={"": 0})
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model.eval()
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# Load a sample image and text input
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input_text = "Identify the skin condition?"
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input_image_path = " Replace with your actual image path"
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input_image = Image.open(input_image_path).convert("RGB")
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# Process the input
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inputs = processor(text=input_text, images=input_image, return_tensors="pt", padding="longest").to("cuda" if torch.cuda.is_available() else "cpu")
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# Set the maximum length for generation
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max_new_tokens = 50
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# Run inference
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with torch.no_grad():
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outputs = model.generate(**inputs, max_new_tokens=max_new_tokens)
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# Decode the output
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decoded_output = processor.decode(outputs[0], skip_special_tokens=True)
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print("Model Output:", decoded_output)
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```
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## Training Details
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### Training Data
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The model was fine-tuned on a dataset of dermatological images combined with disease names
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### Training Procedure
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The model was fine-tuned using LoRA (Low-Rank Adaptation) for more efficient training. Mixed precision (bfloat16) was used to speed up training and reduce memory usage.
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#### Training Hyperparameters
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- **Training regime:** Mixed precision (bfloat16)
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- **Epochs:** 10
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- **Learning rate:** 2e-5
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- **Batch size:** 6
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- **Gradient accumulation steps:** 4
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## Evaluation
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### Testing Data, Factors & Metrics
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#### Testing Data
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The model was evaluated on a separate validation set of dermatological images and Disease Names, distinct from the training data.
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#### Metrics
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- **Validation Loss:** The loss was tracked throughout the training process to evaluate model performance.
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- **Accuracy:** The primary metric for assessing model predictions.
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### Results
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The model achieved a final validation loss of approximately 0.2214, indicating reasonable performance in predicting skin conditions based on the dataset used.
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#### Summary
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## Environmental Impact
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- **Hardware Type:** 1 x L4 GPU
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- **Hours used:** ~22 HOURS
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- **Cloud Provider:** LIGHTNING AI
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- **Compute Region:** USA
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- **Carbon Emitted:** 0.9 kg eq. CO2
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## Technical Specifications
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### Model Architecture and Objective
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- **Architecture:** Vision-Language model based on PaliGemma-3B
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- **Objective:** To classify and diagnose dermatological conditions from images and text
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### Compute Infrastructure
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#### Hardware
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- **GPU:** 1xL4 GPU
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## Model Card Authors
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Bruce_Wayne
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config.json
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{
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"_name_or_path": "google/paligemma-3b-pt-224",
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"architectures": [
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"PaliGemmaForConditionalGeneration"
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],
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"bos_token_id": 2,
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"eos_token_id": 1,
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"hidden_size": 2048,
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"image_token_index": 257152,
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"model_type": "paligemma",
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"pad_token_id": 0,
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"projection_dim": 2048,
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"text_config": {
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"hidden_size": 2048,
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"intermediate_size": 16384,
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"model_type": "gemma",
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"num_attention_heads": 8,
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"num_hidden_layers": 18,
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"num_image_tokens": 256,
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"num_key_value_heads": 1,
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"torch_dtype": "float32",
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"vocab_size": 257216
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},
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"torch_dtype": "float32",
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"transformers_version": "4.45.0.dev0",
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"vision_config": {
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"hidden_size": 1152,
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"intermediate_size": 4304,
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"model_type": "siglip_vision_model",
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"num_attention_heads": 16,
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"num_hidden_layers": 27,
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"num_image_tokens": 256,
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"patch_size": 14,
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"projection_dim": 2048,
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"projector_hidden_act": "gelu_fast",
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"vision_use_head": false
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}
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}
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generation_config.json
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{
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"_from_model_config": true,
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"bos_token_id": 2,
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"eos_token_id": 1,
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"pad_token_id": 0,
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"transformers_version": "4.45.0.dev0"
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}
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gitattributes
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*.7z filter=lfs diff=lfs merge=lfs -text
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*.bin filter=lfs diff=lfs merge=lfs -text
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*.bz2 filter=lfs diff=lfs merge=lfs -text
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*.ckpt filter=lfs diff=lfs merge=lfs -text
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*.ftz filter=lfs diff=lfs merge=lfs -text
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*.gz filter=lfs diff=lfs merge=lfs -text
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*.h5 filter=lfs diff=lfs merge=lfs -text
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*.joblib filter=lfs diff=lfs merge=lfs -text
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*.lfs.* filter=lfs diff=lfs merge=lfs -text
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*.mlmodel filter=lfs diff=lfs merge=lfs -text
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*.model filter=lfs diff=lfs merge=lfs -text
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*.msgpack filter=lfs diff=lfs merge=lfs -text
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*.npy filter=lfs diff=lfs merge=lfs -text
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*.npz filter=lfs diff=lfs merge=lfs -text
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*.onnx filter=lfs diff=lfs merge=lfs -text
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*.ot filter=lfs diff=lfs merge=lfs -text
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*.parquet filter=lfs diff=lfs merge=lfs -text
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*.pb filter=lfs diff=lfs merge=lfs -text
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*.pickle filter=lfs diff=lfs merge=lfs -text
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*.pkl filter=lfs diff=lfs merge=lfs -text
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*.pt filter=lfs diff=lfs merge=lfs -text
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*.pth filter=lfs diff=lfs merge=lfs -text
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*.rar filter=lfs diff=lfs merge=lfs -text
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*.safetensors filter=lfs diff=lfs merge=lfs -text
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saved_model/**/* filter=lfs diff=lfs merge=lfs -text
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*.tar.* filter=lfs diff=lfs merge=lfs -text
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*.tar filter=lfs diff=lfs merge=lfs -text
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*.tflite filter=lfs diff=lfs merge=lfs -text
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*.tgz filter=lfs diff=lfs merge=lfs -text
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*.wasm filter=lfs diff=lfs merge=lfs -text
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*.xz filter=lfs diff=lfs merge=lfs -text
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*.zip filter=lfs diff=lfs merge=lfs -text
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*.zst filter=lfs diff=lfs merge=lfs -text
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*tfevents* filter=lfs diff=lfs merge=lfs -text
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tokenizer.json filter=lfs diff=lfs merge=lfs -text
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model-00002-of-00003.safetensors
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version https://git-lfs.github.com/spec/v1
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oid sha256:5cfdf65953f036f1789d3f9136758620442f1a64de31372b90204466578b8c16
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size 4999820608
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preprocessor_config.json
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{
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"do_convert_rgb": null,
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"do_normalize": true,
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"do_rescale": true,
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"do_resize": true,
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"image_mean": [
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0.5,
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0.5,
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0.5
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],
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"image_processor_type": "SiglipImageProcessor",
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"image_seq_length": 256,
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"image_std": [
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0.5,
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0.5,
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0.5
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],
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"processor_class": "PaliGemmaProcessor",
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"resample": 3,
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"rescale_factor": 0.00392156862745098,
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"size": {
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"height": 224,
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"width": 224
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}
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}
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|
|
|
|
|
|
|
|
|
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|
|
|
|
| 1 |
+
{
|
| 2 |
+
"additional_special_tokens": [
|
| 3 |
+
{
|
| 4 |
+
"content": "<image>",
|
| 5 |
+
"lstrip": false,
|
| 6 |
+
"normalized": false,
|
| 7 |
+
"rstrip": false,
|
| 8 |
+
"single_word": false
|
| 9 |
+
}
|
| 10 |
+
],
|
| 11 |
+
"bos_token": {
|
| 12 |
+
"content": "<bos>",
|
| 13 |
+
"lstrip": false,
|
| 14 |
+
"normalized": false,
|
| 15 |
+
"rstrip": false,
|
| 16 |
+
"single_word": false
|
| 17 |
+
},
|
| 18 |
+
"eos_token": {
|
| 19 |
+
"content": "<eos>",
|
| 20 |
+
"lstrip": false,
|
| 21 |
+
"normalized": false,
|
| 22 |
+
"rstrip": false,
|
| 23 |
+
"single_word": false
|
| 24 |
+
},
|
| 25 |
+
"pad_token": {
|
| 26 |
+
"content": "<pad>",
|
| 27 |
+
"lstrip": false,
|
| 28 |
+
"normalized": false,
|
| 29 |
+
"rstrip": false,
|
| 30 |
+
"single_word": false
|
| 31 |
+
},
|
| 32 |
+
"unk_token": {
|
| 33 |
+
"content": "<unk>",
|
| 34 |
+
"lstrip": false,
|
| 35 |
+
"normalized": false,
|
| 36 |
+
"rstrip": false,
|
| 37 |
+
"single_word": false
|
| 38 |
+
}
|
| 39 |
+
}
|
tokenizer_config.json
ADDED
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